ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart24e04
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1HCBT2_DIACA (O23917) Anthranilate N-benzoyltransferase protein 2... 57 2e-08
2HCBT1_DIACA (O24645) Anthranilate N-benzoyltransferase protein 1... 57 2e-08
3HCBT3_DIACA (O23918) Anthranilate N-benzoyltransferase protein 3... 55 6e-08
4PLSX_SYNP6 (Q5N5X4) Fatty acid/phospholipid synthesis protein plsX 31 1.6
5SALAT_PAPSO (Q94FT4) Salutaridinol 7-O-acetyltransferase (EC 2.3... 31 1.6
6SPL7_ARATH (Q8S9G8) Squamosa promoter-binding-like protein 7 30 2.1
7RF1_PSESM (Q888C1) Peptide chain release factor 1 (RF-1) 30 2.1
8TKN1_RAT (P06767) Protachykinin 1 precursor (PPT) [Contains: Sub... 29 4.6
9TKN1_MOUSE (P41539) Protachykinin 1 precursor (PPT) [Contains: S... 29 4.6
10RHBB_RHIME (Q9Z3R1) L-2,4-diaminobutyrate decarboxylase (EC 4.1.... 29 6.0
11RF1_PSEPK (Q88PW5) Peptide chain release factor 1 (RF-1) 29 6.0
12RF1_PSEAE (P42806) Peptide chain release factor 1 (RF-1) 29 6.0
13TKN1_MESAU (Q60541) Protachykinin 1 precursor (PPT) [Contains: S... 28 7.9

>HCBT2_DIACA (O23917) Anthranilate N-benzoyltransferase protein 2 (EC 2.3.1.144)|
           (Anthranilate N-hydroxycinnamoyl/benzoyltransferase 2)
          Length = 446

 Score = 57.0 bits (136), Expect = 2e-08
 Identities = 27/68 (39%), Positives = 41/68 (60%)
 Frame = -1

Query: 391 PDVEVDSWLTFPFYELNFGTGSPSYFMPAYFPTEGMLFLVPSNFGDGSVDAFVPLFQENL 212
           P+V V+SW   P+  ++FG GSP++F  +    +G  FL+PS  GDGS+   + LF  +L
Sbjct: 377 PNVLVNSWGRIPYQAMDFGWGSPTFFGISNIFYDGQCFLIPSQNGDGSMTLAINLFSSHL 436

Query: 211 QAFKECCY 188
             FK+  Y
Sbjct: 437 SLFKKYFY 444



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>HCBT1_DIACA (O24645) Anthranilate N-benzoyltransferase protein 1 (EC 2.3.1.144)|
           (Anthranilate N-hydroxycinnamoyl/benzoyltransferase 1)
          Length = 445

 Score = 57.0 bits (136), Expect = 2e-08
 Identities = 27/68 (39%), Positives = 41/68 (60%)
 Frame = -1

Query: 391 PDVEVDSWLTFPFYELNFGTGSPSYFMPAYFPTEGMLFLVPSNFGDGSVDAFVPLFQENL 212
           P+V V+SW   P+  ++FG GSP++F  +    +G  FL+PS  GDGS+   + LF  +L
Sbjct: 376 PNVLVNSWGRIPYQAMDFGWGSPTFFGISNIFYDGQCFLIPSRDGDGSMTLAINLFSSHL 435

Query: 211 QAFKECCY 188
             FK+  Y
Sbjct: 436 SRFKKYFY 443



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>HCBT3_DIACA (O23918) Anthranilate N-benzoyltransferase protein 3 (EC 2.3.1.144)|
           (Anthranilate N-hydroxycinnamoyl/benzoyltransferase 3)
          Length = 445

 Score = 55.5 bits (132), Expect = 6e-08
 Identities = 26/68 (38%), Positives = 41/68 (60%)
 Frame = -1

Query: 391 PDVEVDSWLTFPFYELNFGTGSPSYFMPAYFPTEGMLFLVPSNFGDGSVDAFVPLFQENL 212
           P+V V+SW   P+  ++FG G+P++F  +    +G  FL+PS  GDGS+   + LF  +L
Sbjct: 376 PNVLVNSWGRIPYQAMDFGWGNPTFFGISNIFYDGQCFLIPSQNGDGSMTLAINLFSSHL 435

Query: 211 QAFKECCY 188
             FK+  Y
Sbjct: 436 SLFKKHFY 443



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>PLSX_SYNP6 (Q5N5X4) Fatty acid/phospholipid synthesis protein plsX|
          Length = 346

 Score = 30.8 bits (68), Expect = 1.6
 Identities = 19/66 (28%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
 Frame = +2

Query: 236 EGIDAAVAEVGRDEEEHPLRGEVGRHEVAR-APRAEVQLVERERQPAVHLHVRALRVLAH 412
           E + +   E+ RDE    +RG+VG   + R   R + +L   E   A+ L V  + +++H
Sbjct: 240 EAVGSVFLEIIRDELPRGMRGKVGSTLLRRNLRRIKQRLDHAEHGGALLLGVNGICIISH 299

Query: 413 GAPREP 430
           G+ + P
Sbjct: 300 GSSKAP 305



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>SALAT_PAPSO (Q94FT4) Salutaridinol 7-O-acetyltransferase (EC 2.3.1.150) (salAT)|
          Length = 474

 Score = 30.8 bits (68), Expect = 1.6
 Identities = 15/70 (21%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
 Frame = -1

Query: 403 DAQCPDVEVDSWLTFPFYELNFGTGSPSYFM--PAYFPTEGMLFLVPSNFGDGSVDAFVP 230
           D +  +  + SW     YE++FG G P +    P   P +   F+  +  G+G ++ +  
Sbjct: 396 DVEVINFWISSWCRMGLYEIDFGWGKPIWVTVDPNIKPNKNCFFMNDTKCGEG-IEVWAS 454

Query: 229 LFQENLQAFK 200
             ++++  F+
Sbjct: 455 FLEDDMAKFE 464



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>SPL7_ARATH (Q8S9G8) Squamosa promoter-binding-like protein 7|
          Length = 801

 Score = 30.4 bits (67), Expect = 2.1
 Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
 Frame = -1

Query: 355 FYELNFGTGSPSYFMPAYFPTE---GMLFLVPSNFGDGSVDAFVPLFQENLQA 206
           FY++N     PS F PA+   E   G+   +P   GD +V + + L ++   A
Sbjct: 495 FYKINIVNSDPSLFGPAFVEVENESGLSNFIPLIIGDAAVCSEMKLIEQKFNA 547



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>RF1_PSESM (Q888C1) Peptide chain release factor 1 (RF-1)|
          Length = 360

 Score = 30.4 bits (67), Expect = 2.1
 Identities = 25/80 (31%), Positives = 34/80 (42%), Gaps = 14/80 (17%)
 Frame = +2

Query: 206 RLEVLLE*G--HEGIDAAVAEVGRDEEEHPLRGEVGRHEVARAPRAEVQ----------- 346
           R+E+L E    H G    +A V  D     L+ E G H V R P+ E Q           
Sbjct: 147 RVEILSENEGEHGGYKEVIARVEGDSVYGKLKFESGAHRVQRVPKTESQGRIHTSACTVA 206

Query: 347 -LVERERQPAVHLHVRALRV 403
            L E + Q A+ ++   LRV
Sbjct: 207 VLPEPDEQQAIEINPADLRV 226



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>TKN1_RAT (P06767) Protachykinin 1 precursor (PPT) [Contains: Substance P;|
           Neurokinin A (NKA) (Substance K) (Neuromedin L);
           Neuropeptide K (NPK); Neuropeptide gamma; C-terminal
           flanking peptide]
          Length = 130

 Score = 29.3 bits (64), Expect = 4.6
 Identities = 9/28 (32%), Positives = 18/28 (64%)
 Frame = -2

Query: 183 WSRWPNCESVEEAVRRALVHLIERVAEK 100
           WS W + + ++EA+     HL++R+A +
Sbjct: 31  WSDWSDSDQIKEAMPEPFEHLLQRIARR 58



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>TKN1_MOUSE (P41539) Protachykinin 1 precursor (PPT) [Contains: Substance P;|
           Neurokinin A (NKA) (Substance K) (Neuromedin L);
           Neuropeptide K (NPK); Neuropeptide gamma; C-terminal
           flanking peptide]
          Length = 130

 Score = 29.3 bits (64), Expect = 4.6
 Identities = 9/28 (32%), Positives = 18/28 (64%)
 Frame = -2

Query: 183 WSRWPNCESVEEAVRRALVHLIERVAEK 100
           WS W + + ++EA+     HL++R+A +
Sbjct: 31  WSDWSDSDQIKEAMPEPFEHLLQRIARR 58



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>RHBB_RHIME (Q9Z3R1) L-2,4-diaminobutyrate decarboxylase (EC 4.1.1.-) (DABA|
           decarboxylase) (DABA-DC)
          Length = 495

 Score = 28.9 bits (63), Expect = 6.0
 Identities = 18/50 (36%), Positives = 27/50 (54%)
 Frame = +2

Query: 143 TASSTDSQFGHLLHGVAAFFERLEVLLE*GHEGIDAAVAEVGRDEEEHPL 292
           TA+++    G    G+    + L+ L E G  GI AA+AE+GR   EH +
Sbjct: 48  TAAASSLYSGTSFQGLRGLIDDLDPLPEVG-TGIAAALAEIGRPALEHAM 96



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>RF1_PSEPK (Q88PW5) Peptide chain release factor 1 (RF-1)|
          Length = 360

 Score = 28.9 bits (63), Expect = 6.0
 Identities = 25/80 (31%), Positives = 33/80 (41%), Gaps = 14/80 (17%)
 Frame = +2

Query: 206 RLEVLLE*G--HEGIDAAVAEVGRDEEEHPLRGEVGRHEVARAPRAEVQ----------- 346
           RLE+L E    H G    +A V  +     L+ E G H V R P  E Q           
Sbjct: 147 RLEILSENEGEHGGYKEIIARVEGENVYGKLKFESGAHRVQRVPETESQGRVHTSACTVA 206

Query: 347 -LVERERQPAVHLHVRALRV 403
            L E + Q A+ ++   LRV
Sbjct: 207 VLPEPDEQAAIEINPADLRV 226



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>RF1_PSEAE (P42806) Peptide chain release factor 1 (RF-1)|
          Length = 360

 Score = 28.9 bits (63), Expect = 6.0
 Identities = 21/69 (30%), Positives = 27/69 (39%), Gaps = 12/69 (17%)
 Frame = +2

Query: 233 HEGIDAAVAEVGRDEEEHPLRGEVGRHEVARAPRAEVQ------------LVERERQPAV 376
           H G    +A V  D     L+ E G H V R P  E Q            L E + Q A+
Sbjct: 158 HGGYKEVIARVEGDNVYAKLKFESGAHRVQRVPETESQGRIHTSACTVAVLPEPDEQAAI 217

Query: 377 HLHVRALRV 403
            ++   LRV
Sbjct: 218 EINPADLRV 226



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>TKN1_MESAU (Q60541) Protachykinin 1 precursor (PPT) [Contains: Substance P;|
           Neurokinin A (NKA) (Substance K) (Neuromedin L);
           Neuropeptide K (NPK); Neuropeptide gamma; C-terminal
           flanking peptide]
          Length = 130

 Score = 28.5 bits (62), Expect = 7.9
 Identities = 8/28 (28%), Positives = 18/28 (64%)
 Frame = -2

Query: 183 WSRWPNCESVEEAVRRALVHLIERVAEK 100
           WS W + + ++EA+     H+++R+A +
Sbjct: 31  WSDWSDSDQIKEALPEPFEHILQRIARR 58


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 52,185,923
Number of Sequences: 219361
Number of extensions: 1042132
Number of successful extensions: 3325
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 3268
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3324
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2677159704
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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