ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart24e04
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_450190.1| Oryza sativa (japonica cultivar-group), mRNA 222 8e-55
2dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 222 8e-55
3dbj|AK109723.1| Oryza sativa (japonica cultivar-group) cDNA clon... 222 8e-55
4dbj|AK072013.1| Oryza sativa (japonica cultivar-group) cDNA clon... 222 8e-55
5dbj|AP006548.1| Oryza sativa (japonica cultivar-group) genomic D... 222 8e-55
6ref|XM_450191.1| Oryza sativa (japonica cultivar-group), mRNA 178 1e-41
7ref|XM_474244.1| Oryza sativa (japonica cultivar-group), predic... 58 3e-05
8emb|AL606646.3|OSJN00091 Oryza sativa genomic DNA, chromosome 4,... 58 3e-05
9dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 58 3e-05
10ref|XM_469315.1| Oryza sativa (japonica cultivar-group), mRNA 54 4e-04
11gb|AC078977.6| Oryza sativa (japonica cultivar-group) chromosome... 54 4e-04
12gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 54 4e-04
13gb|AC087412.14| Oryza sativa chromosome 3 BAC OSJNBb0070O09 geno... 54 4e-04
14dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 54 4e-04
15dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 54 4e-04
16gb|AC113249.2| Oryza sativa (japonica cultivar-group) chromosome... 52 0.002
17dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 52 0.002
18dbj|AK061327.1| Oryza sativa (japonica cultivar-group) cDNA clon... 52 0.002
19gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 52 0.002
20ref|NM_196170.1| Oryza sativa (japonica cultivar-group) putative... 50 0.006
21gb|AC114474.2| Genomic sequence for Oryza sativa, Nipponbare str... 50 0.006
22dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 50 0.006
23dbj|AK066965.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.006
24dbj|AK060656.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.006
25gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 50 0.006
26ref|XM_474243.1| Oryza sativa (japonica cultivar-group), predic... 48 0.025
27gb|AY228552.1| Hordeum vulgare agmatine coumaroyltransferase (AC... 48 0.025
28dbj|AK109743.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.025
29gb|AY234333.1| Triticum aestivum putative agmatine coumaroyltran... 46 0.098
30emb|AL355674.10| Human DNA sequence from clone RP11-171A24 on ch... 44 0.39
31gb|AC025431.7|AC025431 Homo sapiens chromosome 15 clone CTD-2330... 44 0.39
32gb|AC138405.6| Mus musculus chromosome 1, clone RP24-280N11, com... 44 0.39
33gb|AC114434.4| Rattus norvegicus 1 BAC CH230-210C18 (Children's ... 42 1.5
34gb|AC131374.1| Oryza sativa (japonica cultivar-group) chromosome... 42 1.5
35gb|AC103745.2| Homo sapiens chromosome 15, clone RP11-249A12, co... 42 1.5
36gb|AC091749.8| Oryza sativa chromosome 10 BAC OSJNBb0008A05 geno... 42 1.5
37gb|AC136896.6| Homo sapiens chromosome 15, clone RP11-860O1, com... 42 1.5
38gb|AC135350.6| Homo sapiens chromosome 15, clone RP13-946E15, co... 42 1.5
39emb|CT573052.2| Medicago truncatula chromosome 5 clone mth2-60f2... 42 1.5
40gb|AC006602.1|AC006602 Homo sapiens Chromosome 15q11-q13 PAC clo... 42 1.5
41gb|AY386262.1| Homo sapiens c114 SLIT-like testicular protein mR... 40 6.0
42gb|AC121938.3| Mus musculus BAC clone RP24-208D21 from chromosom... 40 6.0
43gb|AC123031.4| Mus musculus BAC clone RP24-576D11 from chromosom... 40 6.0
44gb|AC129195.3| Mus musculus BAC clone RP24-150H14 from chromosom... 40 6.0
45emb|AL157702.10| Human DNA sequence from clone RP11-18B16 on chr... 40 6.0
46ref|NM_001006607.1| Homo sapiens c114 SLIT-like testicular prote... 40 6.0
47dbj|AK126994.1| Homo sapiens cDNA FLJ45049 fis, clone BRAWH3022347 40 6.0
48dbj|AK094908.1| Homo sapiens cDNA FLJ37589 fis, clone BRCOC2006243 40 6.0
49dbj|AK091733.1| Homo sapiens cDNA FLJ34414 fis, clone HEART2003168 40 6.0
50gb|AC158680.4| Mus musculus 6 BAC RP23-112F6 (Roswell Park Cance... 40 6.0
51dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.0
52gb|AC093721.3| Homo sapiens BAC clone CTD-2010B10 from 4, comple... 40 6.0
53gb|AC138688.2| Homo sapiens chromosome 17, clone RP11-300H14, co... 40 6.0
54dbj|AP003524.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.0
55emb|BX647266.1|HSM807410 Homo sapiens mRNA; cDNA DKFZp686J1482 (... 40 6.0
56emb|BX537922.1|HSM806036 Homo sapiens mRNA; cDNA DKFZp686A05147 ... 40 6.0
57gb|BC071681.1| Homo sapiens ADP-ribosylation factor-like protein... 40 6.0
58dbj|AB209344.1| Homo sapiens mRNA for ADP-ribosylation factor 7 ... 40 6.0
59gb|AC098597.2| Homo sapiens BAC clone RP11-521C6 from 4, complet... 40 6.0 
>ref|XM_450190.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1314

 Score =  222 bits (112), Expect = 8e-55
 Identities = 223/260 (85%)
 Strand = Plus / Minus

                                                                        
Query: 177  tactccatggagtagcagcattctttgaacgcctggaggttctcttggaataggggcacg 236
            |||||||||||||||||||| || ||||| |||| |||||| |  | ||| | ||| |||
Sbjct: 1313 tactccatggagtagcagcactccttgaatgcctcgaggttgtggttgaagacggggacg 1254

                                                                        
Query: 237  aaggcatcgacgctgccgtcgccgaagttggacgggacgaggaagagcatcccctccgtg 296
            ||||| ||||||||||||||||||| ||  ||||| || ||||| |||||||||||||| 
Sbjct: 1253 aaggcgtcgacgctgccgtcgccgaggtacgacggcaccaggaacagcatcccctccgtc 1194

                                                                        
Query: 297  gggaagtaggccggcatgaagtagctcgggctccccgtgccgaagttcagctcgtagaac 356
            || ||||| | ||||||||||||| ||||||| || ||||||||||  ||||||||||||
Sbjct: 1193 ggaaagtacgacggcatgaagtaggtcgggctgccggtgccgaagtcgagctcgtagaac 1134

                                                                        
Query: 357  gggaacgtcagccagctgtccacctccacgtccgggcactgcgcgtccttgcacacggcg 416
            ||||| || |||||||||||||||||  ||| ||||||| || ||||||||  |||||||
Sbjct: 1133 gggaaggtgagccagctgtccacctcggcgttcgggcacagcacgtccttgagcacggcg 1074

                                
Query: 417  ctccgcgcgagcccctcctt 436
            ||| ||||||||||||||||
Sbjct: 1073 ctcggcgcgagcccctcctt 1054
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score =  222 bits (112), Expect = 8e-55
 Identities = 223/260 (85%)
 Strand = Plus / Minus

                                                                            
Query: 177      tactccatggagtagcagcattctttgaacgcctggaggttctcttggaataggggcacg 236
                |||||||||||||||||||| || ||||| |||| |||||| |  | ||| | ||| |||
Sbjct: 21150650 tactccatggagtagcagcactccttgaatgcctcgaggttgtggttgaagacggggacg 21150591

                                                                            
Query: 237      aaggcatcgacgctgccgtcgccgaagttggacgggacgaggaagagcatcccctccgtg 296
                ||||| ||||||||||||||||||| ||  ||||| || ||||| |||||||||||||| 
Sbjct: 21150590 aaggcgtcgacgctgccgtcgccgaggtacgacggcaccaggaacagcatcccctccgtc 21150531

                                                                            
Query: 297      gggaagtaggccggcatgaagtagctcgggctccccgtgccgaagttcagctcgtagaac 356
                || ||||| | ||||||||||||| ||||||| || ||||||||||  ||||||||||||
Sbjct: 21150530 ggaaagtacgacggcatgaagtaggtcgggctgccggtgccgaagtcgagctcgtagaac 21150471

                                                                            
Query: 357      gggaacgtcagccagctgtccacctccacgtccgggcactgcgcgtccttgcacacggcg 416
                ||||| || |||||||||||||||||  ||| ||||||| || ||||||||  |||||||
Sbjct: 21150470 gggaaggtgagccagctgtccacctcggcgttcgggcacagcacgtccttgagcacggcg 21150411

                                    
Query: 417      ctccgcgcgagcccctcctt 436
                ||| ||||||||||||||||
Sbjct: 21150410 ctcggcgcgagcccctcctt 21150391



 Score =  178 bits (90), Expect = 1e-41
 Identities = 216/258 (83%)
 Strand = Plus / Minus

                                                                            
Query: 176      ctactccatggagtagcagcattctttgaacgcctggaggttctcttggaataggggcac 235
                |||||| |||||||||||||  |  ||||| |||| |||||| |  | ||| | ||| ||
Sbjct: 21163666 ctactctatggagtagcagctctgcttgaatgcctcgaggttgtggtcgaagacggggac 21163607

                                                                            
Query: 236      gaaggcatcgacgctgccgtcgccgaagttggacgggacgaggaagagcatcccctccgt 295
                |||||| ||||||||||||||||||| ||  ||||| || ||||| ||||||||||||||
Sbjct: 21163606 gaaggcgtcgacgctgccgtcgccgaggtacgacggcaccaggaacagcatcccctccgt 21163547

                                                                            
Query: 296      ggggaagtaggccggcatgaagtagctcgggctccccgtgccgaagttcagctcgtagaa 355
                 |||||||||| ||||||||||||| ||||||  ||   ||||||||  |||||||||||
Sbjct: 21163546 cgggaagtaggacggcatgaagtaggtcgggcagccgccgccgaagtcgagctcgtagaa 21163487

                                                                            
Query: 356      cgggaacgtcagccagctgtccacctccacgtccgggcactgcgcgtccttgcacacggc 415
                |||||| || ||||||||||||||||||| ||| |||||| || ||||||||  ||||||
Sbjct: 21163486 cgggaaggtgagccagctgtccacctccaggtcggggcacagcacgtccttgagcacggc 21163427

                                  
Query: 416      gctccgcgcgagcccctc 433
                | || | |||||||||||
Sbjct: 21163426 ggtcggggcgagcccctc 21163409
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>dbj|AK109723.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-146-B05, full
            insert sequence
          Length = 2057

 Score =  222 bits (112), Expect = 8e-55
 Identities = 223/260 (85%)
 Strand = Plus / Minus

                                                                        
Query: 177  tactccatggagtagcagcattctttgaacgcctggaggttctcttggaataggggcacg 236
            |||||||||||||||||||| || ||||| |||| |||||| |  | ||| | ||| |||
Sbjct: 1460 tactccatggagtagcagcactccttgaatgcctcgaggttgtggttgaagacggggacg 1401

                                                                        
Query: 237  aaggcatcgacgctgccgtcgccgaagttggacgggacgaggaagagcatcccctccgtg 296
            ||||| ||||||||||||||||||| ||  ||||| || ||||| |||||||||||||| 
Sbjct: 1400 aaggcgtcgacgctgccgtcgccgaggtacgacggcaccaggaacagcatcccctccgtc 1341

                                                                        
Query: 297  gggaagtaggccggcatgaagtagctcgggctccccgtgccgaagttcagctcgtagaac 356
            || ||||| | ||||||||||||| ||||||| || ||||||||||  ||||||||||||
Sbjct: 1340 ggaaagtacgacggcatgaagtaggtcgggctgccggtgccgaagtcgagctcgtagaac 1281

                                                                        
Query: 357  gggaacgtcagccagctgtccacctccacgtccgggcactgcgcgtccttgcacacggcg 416
            ||||| || |||||||||||||||||  ||| ||||||| || ||||||||  |||||||
Sbjct: 1280 gggaaggtgagccagctgtccacctcggcgttcgggcacagcacgtccttgagcacggcg 1221

                                
Query: 417  ctccgcgcgagcccctcctt 436
            ||| ||||||||||||||||
Sbjct: 1220 ctcggcgcgagcccctcctt 1201
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>dbj|AK072013.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013104K15, full
            insert sequence
          Length = 1418

 Score =  222 bits (112), Expect = 8e-55
 Identities = 223/260 (85%)
 Strand = Plus / Minus

                                                                        
Query: 177  tactccatggagtagcagcattctttgaacgcctggaggttctcttggaataggggcacg 236
            |||||||||||||||||||| || ||||| |||| |||||| |  | ||| | ||| |||
Sbjct: 1333 tactccatggagtagcagcactccttgaatgcctcgaggttgtggttgaagacggggacg 1274

                                                                        
Query: 237  aaggcatcgacgctgccgtcgccgaagttggacgggacgaggaagagcatcccctccgtg 296
            ||||| ||||||||||||||||||| ||  ||||| || ||||| |||||||||||||| 
Sbjct: 1273 aaggcgtcgacgctgccgtcgccgaggtacgacggcaccaggaacagcatcccctccgtc 1214

                                                                        
Query: 297  gggaagtaggccggcatgaagtagctcgggctccccgtgccgaagttcagctcgtagaac 356
            || ||||| | ||||||||||||| ||||||| || ||||||||||  ||||||||||||
Sbjct: 1213 ggaaagtacgacggcatgaagtaggtcgggctgccggtgccgaagtcgagctcgtagaac 1154

                                                                        
Query: 357  gggaacgtcagccagctgtccacctccacgtccgggcactgcgcgtccttgcacacggcg 416
            ||||| || |||||||||||||||||  ||| ||||||| || ||||||||  |||||||
Sbjct: 1153 gggaaggtgagccagctgtccacctcggcgttcgggcacagcacgtccttgagcacggcg 1094

                                
Query: 417  ctccgcgcgagcccctcctt 436
            ||| ||||||||||||||||
Sbjct: 1093 ctcggcgcgagcccctcctt 1074
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>dbj|AP006548.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone: P0705E11
          Length = 140729

 Score =  222 bits (112), Expect = 8e-55
 Identities = 223/260 (85%)
 Strand = Plus / Minus

                                                                         
Query: 177   tactccatggagtagcagcattctttgaacgcctggaggttctcttggaataggggcacg 236
             |||||||||||||||||||| || ||||| |||| |||||| |  | ||| | ||| |||
Sbjct: 21407 tactccatggagtagcagcactccttgaatgcctcgaggttgtggttgaagacggggacg 21348

                                                                         
Query: 237   aaggcatcgacgctgccgtcgccgaagttggacgggacgaggaagagcatcccctccgtg 296
             ||||| ||||||||||||||||||| ||  ||||| || ||||| |||||||||||||| 
Sbjct: 21347 aaggcgtcgacgctgccgtcgccgaggtacgacggcaccaggaacagcatcccctccgtc 21288

                                                                         
Query: 297   gggaagtaggccggcatgaagtagctcgggctccccgtgccgaagttcagctcgtagaac 356
             || ||||| | ||||||||||||| ||||||| || ||||||||||  ||||||||||||
Sbjct: 21287 ggaaagtacgacggcatgaagtaggtcgggctgccggtgccgaagtcgagctcgtagaac 21228

                                                                         
Query: 357   gggaacgtcagccagctgtccacctccacgtccgggcactgcgcgtccttgcacacggcg 416
             ||||| || |||||||||||||||||  ||| ||||||| || ||||||||  |||||||
Sbjct: 21227 gggaaggtgagccagctgtccacctcggcgttcgggcacagcacgtccttgagcacggcg 21168

                                 
Query: 417   ctccgcgcgagcccctcctt 436
             ||| ||||||||||||||||
Sbjct: 21167 ctcggcgcgagcccctcctt 21148



 Score =  178 bits (90), Expect = 1e-41
 Identities = 216/258 (83%)
 Strand = Plus / Minus

                                                                         
Query: 176   ctactccatggagtagcagcattctttgaacgcctggaggttctcttggaataggggcac 235
             |||||| |||||||||||||  |  ||||| |||| |||||| |  | ||| | ||| ||
Sbjct: 34423 ctactctatggagtagcagctctgcttgaatgcctcgaggttgtggtcgaagacggggac 34364

                                                                         
Query: 236   gaaggcatcgacgctgccgtcgccgaagttggacgggacgaggaagagcatcccctccgt 295
             |||||| ||||||||||||||||||| ||  ||||| || ||||| ||||||||||||||
Sbjct: 34363 gaaggcgtcgacgctgccgtcgccgaggtacgacggcaccaggaacagcatcccctccgt 34304

                                                                         
Query: 296   ggggaagtaggccggcatgaagtagctcgggctccccgtgccgaagttcagctcgtagaa 355
              |||||||||| ||||||||||||| ||||||  ||   ||||||||  |||||||||||
Sbjct: 34303 cgggaagtaggacggcatgaagtaggtcgggcagccgccgccgaagtcgagctcgtagaa 34244

                                                                         
Query: 356   cgggaacgtcagccagctgtccacctccacgtccgggcactgcgcgtccttgcacacggc 415
             |||||| || ||||||||||||||||||| ||| |||||| || ||||||||  ||||||
Sbjct: 34243 cgggaaggtgagccagctgtccacctccaggtcggggcacagcacgtccttgagcacggc 34184

                               
Query: 416   gctccgcgcgagcccctc 433
             | || | |||||||||||
Sbjct: 34183 ggtcggggcgagcccctc 34166
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>ref|XM_450191.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1359

 Score =  178 bits (90), Expect = 1e-41
 Identities = 216/258 (83%)
 Strand = Plus / Minus

                                                                        
Query: 176  ctactccatggagtagcagcattctttgaacgcctggaggttctcttggaataggggcac 235
            |||||| |||||||||||||  |  ||||| |||| |||||| |  | ||| | ||| ||
Sbjct: 1359 ctactctatggagtagcagctctgcttgaatgcctcgaggttgtggtcgaagacggggac 1300

                                                                        
Query: 236  gaaggcatcgacgctgccgtcgccgaagttggacgggacgaggaagagcatcccctccgt 295
            |||||| ||||||||||||||||||| ||  ||||| || ||||| ||||||||||||||
Sbjct: 1299 gaaggcgtcgacgctgccgtcgccgaggtacgacggcaccaggaacagcatcccctccgt 1240

                                                                        
Query: 296  ggggaagtaggccggcatgaagtagctcgggctccccgtgccgaagttcagctcgtagaa 355
             |||||||||| ||||||||||||| ||||||  ||   ||||||||  |||||||||||
Sbjct: 1239 cgggaagtaggacggcatgaagtaggtcgggcagccgccgccgaagtcgagctcgtagaa 1180

                                                                        
Query: 356  cgggaacgtcagccagctgtccacctccacgtccgggcactgcgcgtccttgcacacggc 415
            |||||| || ||||||||||||||||||| ||| |||||| || ||||||||  ||||||
Sbjct: 1179 cgggaaggtgagccagctgtccacctccaggtcggggcacagcacgtccttgagcacggc 1120

                              
Query: 416  gctccgcgcgagcccctc 433
            | || | |||||||||||
Sbjct: 1119 ggtcggggcgagcccctc 1102
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>ref|XM_474244.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1350

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 44/49 (89%)
 Strand = Plus / Minus

                                                             
Query: 334  tgccgaagttcagctcgtagaacgggaacgtcagccagctgtccacctc 382
            |||||||||  |||||||||||||||| |  ||||||||||||||||||
Sbjct: 1183 tgccgaagtcaagctcgtagaacgggatccgcagccagctgtccacctc 1135



 Score = 44.1 bits (22), Expect = 0.39
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                          
Query: 231  ggcacgaaggcatcgacgctgccgtcgccg 260
            |||||| |||| ||||||||||||||||||
Sbjct: 1286 ggcacgtaggcgtcgacgctgccgtcgccg 1257
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>emb|AL606646.3|OSJN00091 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0087O24,
             complete sequence
          Length = 146168

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 44/49 (89%)
 Strand = Plus / Plus

                                                              
Query: 334   tgccgaagttcagctcgtagaacgggaacgtcagccagctgtccacctc 382
             |||||||||  |||||||||||||||| |  ||||||||||||||||||
Sbjct: 14054 tgccgaagtcaagctcgtagaacgggatccgcagccagctgtccacctc 14102



 Score = 48.1 bits (24), Expect = 0.025
 Identities = 42/48 (87%)
 Strand = Plus / Minus

                                                             
Query: 335   gccgaagttcagctcgtagaacgggaacgtcagccagctgtccacctc 382
             ||||||||  || ||||||||||||| |  ||||||||||||||||||
Sbjct: 11450 gccgaagtcgaggtcgtagaacgggatccgcagccagctgtccacctc 11403



 Score = 44.1 bits (22), Expect = 0.39
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                           
Query: 231   ggcacgaaggcatcgacgctgccgtcgccg 260
             |||||| |||| ||||||||||||||||||
Sbjct: 13951 ggcacgtaggcgtcgacgctgccgtcgccg 13980
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 44/49 (89%)
 Strand = Plus / Plus

                                                                 
Query: 334      tgccgaagttcagctcgtagaacgggaacgtcagccagctgtccacctc 382
                |||||||||  |||||||||||||||| |  ||||||||||||||||||
Sbjct: 33963157 tgccgaagtcaagctcgtagaacgggatccgcagccagctgtccacctc 33963205



 Score = 48.1 bits (24), Expect = 0.025
 Identities = 42/48 (87%)
 Strand = Plus / Minus

                                                                
Query: 335      gccgaagttcagctcgtagaacgggaacgtcagccagctgtccacctc 382
                ||||||||  || ||||||||||||| |  ||||||||||||||||||
Sbjct: 33960553 gccgaagtcgaggtcgtagaacgggatccgcagccagctgtccacctc 33960506



 Score = 44.1 bits (22), Expect = 0.39
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                              
Query: 231      ggcacgaaggcatcgacgctgccgtcgccg 260
                |||||| |||| ||||||||||||||||||
Sbjct: 33963054 ggcacgtaggcgtcgacgctgccgtcgccg 33963083
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>ref|XM_469315.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1389

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 30/31 (96%)
 Strand = Plus / Minus

                                           
Query: 365  cagccagctgtccacctccacgtccgggcac 395
            |||||||||||||||||||| ||||||||||
Sbjct: 1200 cagccagctgtccacctccatgtccgggcac 1170



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 63/77 (81%)
 Strand = Plus / Minus

                                                                        
Query: 243  tcgacgctgccgtcgccgaagttggacgggacgaggaagagcatcccctccgtggggaag 302
            |||| |||||||||||||| |  ||| |||||||||||||   | || ||| ||| || |
Sbjct: 1322 tcgatgctgccgtcgccgaggaaggaggggacgaggaagatggtgccttccatggcgagg 1263

                             
Query: 303  taggccggcatgaagta 319
            |||| ||||||||||||
Sbjct: 1262 taggacggcatgaagta 1246
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>gb|AC078977.6| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0496H07,
             complete sequence
          Length = 164477

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 30/31 (96%)
 Strand = Plus / Plus

                                            
Query: 365   cagccagctgtccacctccacgtccgggcac 395
             |||||||||||||||||| ||||||||||||
Sbjct: 76749 cagccagctgtccacctcgacgtccgggcac 76779
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 30/31 (96%)
 Strand = Plus / Minus

                                               
Query: 365      cagccagctgtccacctccacgtccgggcac 395
                |||||||||||||||||||| ||||||||||
Sbjct: 26918551 cagccagctgtccacctccatgtccgggcac 26918521



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 63/77 (81%)
 Strand = Plus / Minus

                                                                            
Query: 243      tcgacgctgccgtcgccgaagttggacgggacgaggaagagcatcccctccgtggggaag 302
                |||| |||||||||||||| |  ||| |||||||||||||   | || ||| ||| || |
Sbjct: 26918673 tcgatgctgccgtcgccgaggaaggaggggacgaggaagatggtgccttccatggcgagg 26918614

                                 
Query: 303      taggccggcatgaagta 319
                |||| ||||||||||||
Sbjct: 26918613 taggacggcatgaagta 26918597
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>gb|AC087412.14| Oryza sativa chromosome 3 BAC OSJNBb0070O09 genomic sequence, complete
             sequence
          Length = 149303

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 30/31 (96%)
 Strand = Plus / Minus

                                            
Query: 365   cagccagctgtccacctccacgtccgggcac 395
             |||||||||||||||||||| ||||||||||
Sbjct: 97551 cagccagctgtccacctccatgtccgggcac 97521



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 63/77 (81%)
 Strand = Plus / Minus

                                                                         
Query: 243   tcgacgctgccgtcgccgaagttggacgggacgaggaagagcatcccctccgtggggaag 302
             |||| |||||||||||||| |  ||| |||||||||||||   | || ||| ||| || |
Sbjct: 97673 tcgatgctgccgtcgccgaggaaggaggggacgaggaagatggtgccttccatggcgagg 97614

                              
Query: 303   taggccggcatgaagta 319
             |||| ||||||||||||
Sbjct: 97613 taggacggcatgaagta 97597
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5,
              complete sequence
          Length = 29737217

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 30/31 (96%)
 Strand = Plus / Plus

                                             
Query: 365    cagccagctgtccacctccacgtccgggcac 395
              |||||||||||||||||| ||||||||||||
Sbjct: 872325 cagccagctgtccacctcgacgtccgggcac 872355
to top
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 30/31 (96%)
 Strand = Plus / Minus

                                               
Query: 365      cagccagctgtccacctccacgtccgggcac 395
                |||||||||||||||||||| ||||||||||
Sbjct: 27009874 cagccagctgtccacctccatgtccgggcac 27009844



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 63/77 (81%)
 Strand = Plus / Minus

                                                                            
Query: 243      tcgacgctgccgtcgccgaagttggacgggacgaggaagagcatcccctccgtggggaag 302
                |||| |||||||||||||| |  ||| |||||||||||||   | || ||| ||| || |
Sbjct: 27009996 tcgatgctgccgtcgccgaggaaggaggggacgaggaagatggtgccttccatggcgagg 27009937

                                 
Query: 303      taggccggcatgaagta 319
                |||| ||||||||||||
Sbjct: 27009936 taggacggcatgaagta 27009920
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>gb|AC113249.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
              OSJNBa0041L19, complete sequence
          Length = 155086

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 29/30 (96%)
 Strand = Plus / Minus

                                            
Query: 366    agccagctgtccacctccacgtccgggcac 395
              ||||||||||||||||||| ||||||||||
Sbjct: 123946 agccagctgtccacctccaggtccgggcac 123917



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 29/30 (96%)
 Strand = Plus / Plus

                                           
Query: 366   agccagctgtccacctccacgtccgggcac 395
             ||||||||||||||||||| ||||||||||
Sbjct: 88157 agccagctgtccacctccaggtccgggcac 88186
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 29/30 (96%)
 Strand = Plus / Minus

                                              
Query: 366      agccagctgtccacctccacgtccgggcac 395
                ||||||||||||||||||| ||||||||||
Sbjct: 24647044 agccagctgtccacctccaggtccgggcac 24647015



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 29/30 (96%)
 Strand = Plus / Plus

                                              
Query: 366      agccagctgtccacctccacgtccgggcac 395
                ||||||||||||||||||| ||||||||||
Sbjct: 24611255 agccagctgtccacctccaggtccgggcac 24611284
to top
>dbj|AK061327.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-H12, full
            insert sequence
          Length = 1584

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 29/30 (96%)
 Strand = Plus / Minus

                                          
Query: 366  agccagctgtccacctccacgtccgggcac 395
            ||||||||||||||||||| ||||||||||
Sbjct: 1172 agccagctgtccacctccaggtccgggcac 1143
to top
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 29/30 (96%)
 Strand = Plus / Minus

                                              
Query: 366      agccagctgtccacctccacgtccgggcac 395
                ||||||||||||||||||| ||||||||||
Sbjct: 24958714 agccagctgtccacctccaggtccgggcac 24958685



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 29/30 (96%)
 Strand = Plus / Plus

                                              
Query: 366      agccagctgtccacctccacgtccgggcac 395
                ||||||||||||||||||| ||||||||||
Sbjct: 24922925 agccagctgtccacctccaggtccgggcac 24922954
to top
>ref|NM_196170.1| Oryza sativa (japonica cultivar-group) putative anthranilate
            N-benzoyltransferase (OSJNBa0032N04.2), mRNA
          Length = 1305

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                         
Query: 366  agccagctgtccacctccacgtccgggca 394
            ||||||||||||||||||| |||||||||
Sbjct: 1115 agccagctgtccacctccaggtccgggca 1087
to top
>gb|AC114474.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBa0032N04, from chromosome 10, complete sequence
          Length = 159445

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                          
Query: 366   agccagctgtccacctccacgtccgggca 394
             ||||||||||||||||||| |||||||||
Sbjct: 17680 agccagctgtccacctccaggtccgggca 17652
to top
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                             
Query: 366      agccagctgtccacctccacgtccgggca 394
                ||||||||||||||||||| |||||||||
Sbjct: 11699619 agccagctgtccacctccaggtccgggca 11699591



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                            
Query: 366     agccagctgtccacctccacgtccgggca 394
               ||||||||||||||||| | |||||||||
Sbjct: 8891604 agccagctgtccacctcaaggtccgggca 8891576
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>dbj|AK066965.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013092H19, full
           insert sequence
          Length = 996

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 366 agccagctgtccacctccacgtccgggca 394
           ||||||||||||||||||| |||||||||
Sbjct: 718 agccagctgtccacctccaggtccgggca 690
to top
>dbj|AK060656.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-028-A04, full
            insert sequence
          Length = 1482

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                         
Query: 366  agccagctgtccacctccacgtccgggca 394
            ||||||||||||||||||| |||||||||
Sbjct: 1204 agccagctgtccacctccaggtccgggca 1176
to top
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                             
Query: 366      agccagctgtccacctccacgtccgggca 394
                ||||||||||||||||||| |||||||||
Sbjct: 11706959 agccagctgtccacctccaggtccgggca 11706931



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                            
Query: 366     agccagctgtccacctccacgtccgggca 394
               ||||||||||||||||| | |||||||||
Sbjct: 8896743 agccagctgtccacctcaaggtccgggca 8896715
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>ref|XM_474243.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1293

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 42/48 (87%)
 Strand = Plus / Minus

                                                            
Query: 335  gccgaagttcagctcgtagaacgggaacgtcagccagctgtccacctc 382
            ||||||||  || ||||||||||||| |  ||||||||||||||||||
Sbjct: 1110 gccgaagtcgaggtcgtagaacgggatccgcagccagctgtccacctc 1063
to top
>gb|AY228552.1| Hordeum vulgare agmatine coumaroyltransferase (ACT) mRNA, complete
            cds
          Length = 1508

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 42/48 (87%)
 Strand = Plus / Minus

                                                            
Query: 335  gccgaagttcagctcgtagaacgggaacgtcagccagctgtccacctc 382
            |||||||| ||  ||||||||||||| |  ||||||||||||||||||
Sbjct: 1168 gccgaagtccatgtcgtagaacgggatcagcagccagctgtccacctc 1121
to top
>dbj|AK109743.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-146-E07, full
            insert sequence
          Length = 1640

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 42/48 (87%)
 Strand = Plus / Minus

                                                            
Query: 335  gccgaagttcagctcgtagaacgggaacgtcagccagctgtccacctc 382
            ||||||||  || ||||||||||||| |  ||||||||||||||||||
Sbjct: 1264 gccgaagtcgaggtcgtagaacgggatccgcagccagctgtccacctc 1217
to top
>gb|AY234333.1| Triticum aestivum putative agmatine coumaroyltransferase mRNA,
           partial cds
          Length = 1220

 Score = 46.1 bits (23), Expect = 0.098
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                              
Query: 348 tcgtagaacgggaacgtcagccagctgtccacctc 382
           ||||||||||||| |  ||||||||||||||||||
Sbjct: 890 tcgtagaacgggatccgcagccagctgtccacctc 856
to top
>emb|AL355674.10| Human DNA sequence from clone RP11-171A24 on chromosome 9 Contains the
             5' end of the RORB gene for RAR-related orphan receptor B
             protein (RZRB, ROR-BETA), two novel genes and two CpG
             islands, complete sequence
          Length = 174874

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 40    agttctcaaagagaaaaggaaa 61
             ||||||||||||||||||||||
Sbjct: 74820 agttctcaaagagaaaaggaaa 74841
to top
>gb|AC025431.7|AC025431 Homo sapiens chromosome 15 clone CTD-2330J20 map 15q21.3, complete
             sequence
          Length = 138121

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 43    tctcaaagagaaaaggaaaatt 64
             ||||||||||||||||||||||
Sbjct: 94160 tctcaaagagaaaaggaaaatt 94181
to top
>gb|AC138405.6| Mus musculus chromosome 1, clone RP24-280N11, complete sequence
          Length = 151783

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                            
Query: 82     gaaaagagaagacattattttttcagccac 111
              ||||| ||||||||||||||| ||||||||
Sbjct: 142044 gaaaaaagaagacattattttatcagccac 142073
to top
>gb|AC114434.4| Rattus norvegicus 1 BAC CH230-210C18 (Children's Hospital Oakland
            Research Institute) complete sequence
          Length = 127883

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 43   tctcaaagagaaaaggaaaat 63
            |||||||||||||||||||||
Sbjct: 2449 tctcaaagagaaaaggaaaat 2469
to top
>gb|AC131374.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone
             OSJNAb0008A05, complete sequence
          Length = 124366

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 366   agccagctgtccacctccacgtccgggca 394
             ||||||||||||||||| | |||||||||
Sbjct: 96211 agccagctgtccacctcaaggtccgggca 96183
to top
>gb|AC103745.2| Homo sapiens chromosome 15, clone RP11-249A12, complete sequence
          Length = 82642

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 16    tgtgtacacacagtagcattattca 40
             |||||||||| ||||||||||||||
Sbjct: 54963 tgtgtacacatagtagcattattca 54939
to top
>gb|AC091749.8| Oryza sativa chromosome 10 BAC OSJNBb0008A05 genomic sequence, complete
              sequence
          Length = 150465

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 366    agccagctgtccacctccacgtccgggca 394
              ||||||||||||||||| | |||||||||
Sbjct: 146676 agccagctgtccacctcaaggtccgggca 146648
to top
>gb|AC136896.6| Homo sapiens chromosome 15, clone RP11-860O1, complete sequence
          Length = 214946

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 16    tgtgtacacacagtagcattattca 40
             |||||||||| ||||||||||||||
Sbjct: 16502 tgtgtacacatagtagcattattca 16478
to top
>gb|AC135350.6| Homo sapiens chromosome 15, clone RP13-946E15, complete sequence
          Length = 158316

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 16     tgtgtacacacagtagcattattca 40
              |||||||||| ||||||||||||||
Sbjct: 114448 tgtgtacacatagtagcattattca 114472
to top
>emb|CT573052.2| Medicago truncatula chromosome 5 clone mth2-60f21, COMPLETE SEQUENCE
          Length = 131869

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 41    gttctcaaagagaaaaggaaa 61
             |||||||||||||||||||||
Sbjct: 42424 gttctcaaagagaaaaggaaa 42444
to top
>gb|AC006602.1|AC006602 Homo sapiens Chromosome 15q11-q13 PAC clone pDJ476i9 from the
             Prader-Willi/Angelman Syndrome region, complete sequence
          Length = 93610

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 16    tgtgtacacacagtagcattattca 40
             |||||||||| ||||||||||||||
Sbjct: 78498 tgtgtacacatagtagcattattca 78522
to top
>gb|AY386262.1| Homo sapiens c114 SLIT-like testicular protein mRNA, complete cds
          Length = 3597

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 278  gaagagcatcccctccgtgg 297
            ||||||||||||||||||||
Sbjct: 3322 gaagagcatcccctccgtgg 3303
to top
>gb|AC121938.3| Mus musculus BAC clone RP24-208D21 from chromosome 6, complete sequence
          Length = 144353

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 44    ctcaaagagaaaaggaaaat 63
             ||||||||||||||||||||
Sbjct: 14611 ctcaaagagaaaaggaaaat 14592
to top
>gb|AC123031.4| Mus musculus BAC clone RP24-576D11 from chromosome 6, complete sequence
          Length = 143926

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 44     ctcaaagagaaaaggaaaat 63
              ||||||||||||||||||||
Sbjct: 102240 ctcaaagagaaaaggaaaat 102221
to top
>gb|AC129195.3| Mus musculus BAC clone RP24-150H14 from chromosome 1, complete
            sequence
          Length = 152726

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 81   ggaaaagagaagacattatttttt 104
            |||||||| |||||||||||||||
Sbjct: 8497 ggaaaagaaaagacattatttttt 8520
to top
>emb|AL157702.10| Human DNA sequence from clone RP11-18B16 on chromosome 9 Contains the
             3' end of a novel gene and a novel pseudogene, complete
             sequence
          Length = 160990

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 48    aagagaaaaggaaaatttcc 67
             ||||||||||||||||||||
Sbjct: 74309 aagagaaaaggaaaatttcc 74290
to top
>ref|NM_001006607.1| Homo sapiens c114 SLIT-like testicular protein (LOC474170), mRNA
          Length = 3597

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 278  gaagagcatcccctccgtgg 297
            ||||||||||||||||||||
Sbjct: 3322 gaagagcatcccctccgtgg 3303
to top
>dbj|AK126994.1| Homo sapiens cDNA FLJ45049 fis, clone BRAWH3022347
          Length = 3857

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 278  gaagagcatcccctccgtgg 297
            ||||||||||||||||||||
Sbjct: 3583 gaagagcatcccctccgtgg 3564
to top
>dbj|AK094908.1| Homo sapiens cDNA FLJ37589 fis, clone BRCOC2006243
          Length = 2399

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 278  gaagagcatcccctccgtgg 297
            ||||||||||||||||||||
Sbjct: 1829 gaagagcatcccctccgtgg 1848
to top
>dbj|AK091733.1| Homo sapiens cDNA FLJ34414 fis, clone HEART2003168
          Length = 3082

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 278  gaagagcatcccctccgtgg 297
            ||||||||||||||||||||
Sbjct: 2813 gaagagcatcccctccgtgg 2794
to top
>gb|AC158680.4| Mus musculus 6 BAC RP23-112F6 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 206705

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 43     tctcaaagagaaaaggaaaa 62
              ||||||||||||||||||||
Sbjct: 99984  tctcaaagagaaaaggaaaa 100003
to top
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 46       caaagagaaaaggaaaattt 65
                ||||||||||||||||||||
Sbjct: 11018503 caaagagaaaaggaaaattt 11018522
to top
>gb|AC093721.3| Homo sapiens BAC clone CTD-2010B10 from 4, complete sequence
          Length = 128148

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 41    gttctcaaagagaaaaggaa 60
             ||||||||||||||||||||
Sbjct: 70846 gttctcaaagagaaaaggaa 70827
to top
>gb|AC138688.2| Homo sapiens chromosome 17, clone RP11-300H14, complete sequence
          Length = 183093

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 278    gaagagcatcccctccgtgg 297
              ||||||||||||||||||||
Sbjct: 109847 gaagagcatcccctccgtgg 109828
to top
>dbj|AP003524.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0501G08
          Length = 173505

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 46     caaagagaaaaggaaaattt 65
              ||||||||||||||||||||
Sbjct: 102585 caaagagaaaaggaaaattt 102604
to top
>emb|BX647266.1|HSM807410 Homo sapiens mRNA; cDNA DKFZp686J1482 (from clone DKFZp686J1482)
          Length = 3960

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 278  gaagagcatcccctccgtgg 297
            ||||||||||||||||||||
Sbjct: 2799 gaagagcatcccctccgtgg 2818
to top
>emb|BX537922.1|HSM806036 Homo sapiens mRNA; cDNA DKFZp686A05147 (from clone DKFZp686A05147)
          Length = 3681

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 278  gaagagcatcccctccgtgg 297
            ||||||||||||||||||||
Sbjct: 1638 gaagagcatcccctccgtgg 1657
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>gb|BC071681.1| Homo sapiens ADP-ribosylation factor-like protein, mRNA (cDNA clone
           IMAGE:3907731)
          Length = 2208

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 278 gaagagcatcccctccgtgg 297
           ||||||||||||||||||||
Sbjct: 366 gaagagcatcccctccgtgg 385
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>dbj|AB209344.1| Homo sapiens mRNA for ADP-ribosylation factor 7 variant protein
          Length = 5196

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 278  gaagagcatcccctccgtgg 297
            ||||||||||||||||||||
Sbjct: 2770 gaagagcatcccctccgtgg 2789
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>gb|AC098597.2| Homo sapiens BAC clone RP11-521C6 from 4, complete sequence
          Length = 177846

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 93     acattattttttcagccacc 112
              ||||||||||||||||||||
Sbjct: 125463 acattattttttcagccacc 125444


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,073,968
Number of Sequences: 3902068
Number of extensions: 4073968
Number of successful extensions: 81400
Number of sequences better than 10.0: 59
Number of HSP's better than 10.0 without gapping: 61
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 80931
Number of HSP's gapped (non-prelim): 454
length of query: 448
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 426
effective length of database: 17,147,199,772
effective search space: 7304707102872
effective search space used: 7304707102872
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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