>US02_EHV1K (P32517) US1 protein|
          Length = 303

 Score = 31.6 bits (70), Expect = 1.2
 Identities = 15/27 (55%), Positives = 15/27 (55%)
 Frame = +3

Query: 405 APRGSWRTPAPARPAEGAACPPMPMTP 485
           APR   R PAPAR    AA PP P  P
Sbjct: 249 APRRRSRAPAPARSTAAAATPPRPGDP 275

>Y007_MYCTU (P71575) Hypothetical protein Rv0007/MT0007|
          Length = 304

 Score = 30.4 bits (67), Expect = 2.6
 Identities = 13/18 (72%), Positives = 13/18 (72%)
 Frame = +3

Query: 408 PRGSWRTPAPARPAEGAA 461
           PR   R PAPARPAEG A
Sbjct: 134 PRAPQRNPAPARPAEGGA 151

>TB182_HUMAN (Q9C0C2) 182 kDa tankyrase 1-binding protein|
          Length = 1729

 Score = 29.6 bits (65), Expect = 4.4
 Identities = 13/24 (54%), Positives = 15/24 (62%)
 Frame = +3

Query: 414 GSWRTPAPARPAEGAACPPMPMTP 485
           GS  TP+P  PAEGA   P P +P
Sbjct: 347 GSRHTPSPGLPAEGAPEAPRPSSP 370

>RTN4R_RAT (Q99M75) Reticulon-4 receptor precursor (Nogo receptor) (NgR)|
           (Nogo-66 receptor)
          Length = 473

 Score = 29.3 bits (64), Expect = 5.8
 Identities = 17/46 (36%), Positives = 21/46 (45%)
 Frame = -2

Query: 477 WASEDRRRPLQAWLEQVFARSLEELKLKHSKPAGNSALRLVACDCE 340
           W  + R RPL AWL++    S E       + AG    RL A D E
Sbjct: 262 WVCDCRARPLWAWLQKFRGSSSEVPCNLPQRLAGRDLKRLAASDLE 307

>RTN4R_MACFA (Q9N0E3) Reticulon-4 receptor precursor (Nogo receptor) (NgR)|
           (Nogo-66 receptor)
          Length = 473

 Score = 29.3 bits (64), Expect = 5.8
 Identities = 20/53 (37%), Positives = 25/53 (47%)
 Frame = -2

Query: 477 WASEDRRRPLQAWLEQVFARSLEELKLKHSKPAGNSALRLVACDCEDGKAAAT 319
           W  + R RPL AWL++    S E       + AG    RL A D + G A AT
Sbjct: 262 WVCDCRARPLWAWLQKFRGSSSEVPCSLPQRLAGRDLKRLAANDLQ-GCAVAT 313

>RTN4R_HUMAN (Q9BZR6) Reticulon-4 receptor precursor (Nogo receptor) (NgR)|
           (Nogo-66 receptor)
          Length = 473

 Score = 29.3 bits (64), Expect = 5.8
 Identities = 20/53 (37%), Positives = 25/53 (47%)
 Frame = -2

Query: 477 WASEDRRRPLQAWLEQVFARSLEELKLKHSKPAGNSALRLVACDCEDGKAAAT 319
           W  + R RPL AWL++    S E       + AG    RL A D + G A AT
Sbjct: 262 WVCDCRARPLWAWLQKFRGSSSEVPCSLPQRLAGRDLKRLAANDLQ-GCAVAT 313

>RTN4R_MOUSE (Q99PI8) Reticulon-4 receptor precursor (Nogo receptor) (NgR)|
           (Nogo-66 receptor)
          Length = 473

 Score = 28.5 bits (62), Expect = 9.9
 Identities = 23/69 (33%), Positives = 31/69 (44%)
 Frame = -2

Query: 477 WASEDRRRPLQAWLEQVFARSLEELKLKHSKPAGNSALRLVACDCEDGKAAATAAKEDGG 298
           W  + R RPL AWL++    S E       + A     RL A D E G A A+     G 
Sbjct: 262 WVCDCRARPLWAWLQKFRGSSSEVPCNLPQRLADRDLKRLAASDLE-GCAVAS-----GP 315

Query: 297 FGPLLPSRI 271
           F P+  S++
Sbjct: 316 FRPIQTSQL 324


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 64,590,025
Number of Sequences: 219361
Number of extensions: 1139923
Number of successful extensions: 3424
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 3158
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3416
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3362826254
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)