>CWC15_EMENI (Q5B020) Pre-mRNA-splicing factor cwc15|
          Length = 232

 Score = 90.9 bits (224), Expect = 2e-18
 Identities = 48/96 (50%), Positives = 60/96 (62%), Gaps = 1/96 (1%)
 Frame = -1

Query: 477 LMAELERIKKERAEDXXXXXXXXXXXXXXXXXXXXXRGNPLINMNNSGSFNVKRRWDDDV 298
           LM ELE+IKKER                        RGNPL+N ++   FN+KRRWDDDV
Sbjct: 140 LMRELEKIKKERLAQKEKEERERAAKEEEQREVDIARGNPLLNPSD---FNIKRRWDDDV 196

Query: 297 VFKNQARG-ETKTPKRFINDTIRSDFHRKFLHRYMK 193
           VFKNQARG E K  K F+ND +RSDFH+KF+ +Y++
Sbjct: 197 VFKNQARGTEDKRGKEFVNDLLRSDFHKKFMSKYVR 232

>CWC15_SCHPO (P78794) Pre-mRNA-splicing factor cwc15 (Complexed with cdc5|
           protein 15) (Cell cycle control protein cwf15)
          Length = 265

 Score = 81.6 bits (200), Expect = 1e-15
 Identities = 41/97 (42%), Positives = 57/97 (58%), Gaps = 1/97 (1%)
 Frame = -1

Query: 483 EALMAELERIKKERAEDXXXXXXXXXXXXXXXXXXXXXRGNPLINMNNSGSFNVKRRWDD 304
           + L+ ELE IK+ER  +                      GN L+N  +SGSF VKRRWD+
Sbjct: 168 QQLLRELENIKQERKREQMLQEEKNRALEQEKREREIAFGNELLNKASSGSFQVKRRWDE 227

Query: 303 DVVFKNQARGETKTPK-RFINDTIRSDFHRKFLHRYM 196
           DVVF+N  +G   TP+  F+ND +RS+FH+KFL R++
Sbjct: 228 DVVFRNTHKGVDDTPRPGFVNDMLRSEFHKKFLARFV 264

>CWC15_YARLI (Q6C0E6) Pre-mRNA-splicing factor CWC15|
          Length = 215

 Score = 73.2 bits (178), Expect = 3e-13
 Identities = 38/97 (39%), Positives = 55/97 (56%)
 Frame = -1

Query: 483 EALMAELERIKKERAEDXXXXXXXXXXXXXXXXXXXXXRGNPLINMNNSGSFNVKRRWDD 304
           E L  ELERIK+ERA+                       GNPL+N        +KR+W++
Sbjct: 125 ELLRIELERIKQERAQAKAREEERLALEEAKAREEQVAFGNPLMN-----PVAIKRKWNE 179

Query: 303 DVVFKNQARGETKTPKRFINDTIRSDFHRKFLHRYMK 193
           DVVF+NQ + + +    ++ND IRSDFHRKF++RY++
Sbjct: 180 DVVFRNQTK-QARKEDSYVNDLIRSDFHRKFMNRYVR 215

>CWC15_DEBHA (Q6BP48) Pre-mRNA-splicing factor CWC15|
          Length = 226

 Score = 53.9 bits (128), Expect = 2e-07
 Identities = 30/98 (30%), Positives = 45/98 (45%), Gaps = 3/98 (3%)
 Frame = -1

Query: 477 LMAELERIKKERAEDXXXXXXXXXXXXXXXXXXXXXRGNPLINM---NNSGSFNVKRRWD 307
           LM EL +IKKER E+                       NPL+ +   +   +F +K+ W 
Sbjct: 136 LMEELAKIKKERQEEQEKLELQNKLDKTKVS-------NPLVQVVGASTEANFKIKKSWR 188

Query: 306 DDVVFKNQARGETKTPKRFINDTIRSDFHRKFLHRYMK 193
           D   FK Q        + F NDT+ S+FH+ FL +Y++
Sbjct: 189 DSTAFKKQNSQNKNDDETFTNDTLNSEFHQNFLTKYIR 226

>CWC15_CANGA (Q6FVL2) Pre-mRNA-splicing factor CWC15|
          Length = 143

 Score = 36.2 bits (82), Expect = 0.047
 Identities = 17/57 (29%), Positives = 33/57 (57%), Gaps = 3/57 (5%)
 Frame = -1

Query: 354 INMNNSGSFNVKRRWDDDVVFKNQA---RGETKTPKRFINDTIRSDFHRKFLHRYMK 193
           + + +     + ++ DD V +   A   R +   P++F NDT+RS  H++FL+R++K
Sbjct: 87  LEVEDKKDIKLVKKEDDSVSWGKTAFSRRKKVVKPEKFTNDTVRSQKHKEFLNRFVK 143

>CWC15_CANAL (Q59PD3) Pre-mRNA-splicing factor CWC15|
          Length = 224

 Score = 35.0 bits (79), Expect = 0.10
 Identities = 19/97 (19%), Positives = 40/97 (41%), Gaps = 2/97 (2%)
 Frame = -1

Query: 477 LMAELERIKKERAEDXXXXXXXXXXXXXXXXXXXXXRGNPLINMNNSGSFNVKRRWDDDV 298
           L+ E+E I++E+ +                        N  + +    S   K+ W    
Sbjct: 142 LLKEIENIRREKEKQNSDSTNNSI--------------NNSLTLQTHDSSTKKKSWRSST 187

Query: 297 VFKNQARGETKTPKR--FINDTIRSDFHRKFLHRYMK 193
            F N+++ E+   +   +  DT+ S  H+KF+ +Y++
Sbjct: 188 TFNNKSKKESTNDRNNNYTTDTLNSQHHQKFMSKYIR 224

>CWC15_YEAST (Q03772) Pre-mRNA-splicing factor CWC15 (Complexed with CEF1|
           protein 15)
          Length = 175

 Score = 30.8 bits (68), Expect = 2.0
 Identities = 16/62 (25%), Positives = 32/62 (51%), Gaps = 9/62 (14%)
 Frame = -1

Query: 351 NMNNSGSFNVKRRWDDDVVF-KNQARGET--------KTPKRFINDTIRSDFHRKFLHRY 199
           N    G  + +R W     F +++   ET        K+   +IND  +S++H++FLH++
Sbjct: 114 NEQLKGGNSSRRSWRKGTAFGRHKVTKETNIKEHATKKSASGYINDMTKSEYHQEFLHKH 173

Query: 198 MK 193
           ++
Sbjct: 174 VR 175

>HIS5_CLOAB (Q97KI0) Imidazole glycerol phosphate synthase subunit hisH (EC|
           2.4.2.-) (IGP synthase glutamine amidotransferase
           subunit) (IGP synthase subunit hisH) (ImGP synthase
           subunit hisH) (IGPS subunit hisH)
          Length = 203

 Score = 29.3 bits (64), Expect = 5.7
 Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 3/47 (6%)
 Frame = +1

Query: 4   SKASVIYKQ*VLFCTLRNRVNISSY---DNKDITVMSYKSMFGIQKH 135
           SK S +Y     +  L ++ N+++Y     K   V+SYK++FGIQ H
Sbjct: 138 SKGSYVYFVHSYYAELADKNNLNAYCDYGTKLPAVVSYKNIFGIQFH 184

>ZN683_HUMAN (Q8IZ20) Zinc finger protein 683|
          Length = 509

 Score = 28.9 bits (63), Expect = 7.5
 Identities = 13/43 (30%), Positives = 21/43 (48%)
 Frame = -3

Query: 274 RDQDTETVHQRHHQK*FPPQVSA*VHEMMLLYALCCMDSMHAG 146
           R + T+ +H + H +   PQ    VH  + L +L C+   H G
Sbjct: 417 RSRFTQHIHLKLHHRLHAPQPCGLVHTQLPLASLACLAQWHQG 459

>ENP1_BOVIN (O18956) Ectonucleoside triphosphate diphosphohydrolase 1 (EC|
           3.6.1.5) (NTPDase1) (Ecto-ATP diphosphohydrolase)
           (ATPDase) (Lymphoid cell activation antigen) (CD39
           antigen) (Ecto-apyrase)
          Length = 513

 Score = 28.5 bits (62), Expect = 9.7
 Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
 Frame = +1

Query: 40  FCTLRNRVNISSYDNKDITVMSYKSMFGI-QKHHRLFQHAYCPYN 171
           FCT R+ +N S Y   DI +    +     Q   +LF  +YCPY+
Sbjct: 299 FCTKRHELNSSFYPLVDIEIRGAGNFQRCRQSIIQLFNTSYCPYS 343


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 62,783,526
Number of Sequences: 219361
Number of extensions: 1238028
Number of successful extensions: 2736
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2694
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2729
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3304846491
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)