Clone Name | rbart24d09 |
---|---|
Clone Library Name | barley_pub |
>ref|NM_185332.2| Oryza sativa (japonica cultivar-group), mRNA Length = 1152 Score = 361 bits (182), Expect = 1e-96 Identities = 266/294 (90%) Strand = Plus / Minus Query: 184 gcagcatcatttcatgtacctatgcagaaacttgcggtggaaatcacttctgatggtgtc 243 ||||||||| ||||||||||| ||||||||||| |||||||||||||||||||| ||||| Sbjct: 802 gcagcatcacttcatgtacctctgcagaaacttacggtggaaatcacttctgatagtgtc 743 Query: 244 gttgatgaaccgtttcggtgtcttggtctctccacgggcctggttcttgaatacaacatc 303 ||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 742 gttgatgaaacgtttcggtgtcttggtctctccacgagcctggttcttgaatacaacatc 683 Query: 304 atcatcccaccttctcttcacgttgaaggagccggagttattcatattgatcagcgggtt 363 |||||||||||||||||| || |||||||| |||| ||| || ||||||||||| ||||| Sbjct: 682 atcatcccaccttctcttaacattgaaggatccggcgttgttaatattgatcagggggtt 623 Query: 364 tcctcgcatcagctcagcctccttcatcttggcctcttcttctgcttgctgacgctcctt 423 ||| |||||||| ||||| ||||||||||| ||||| ||||||||||| || || ||||| Sbjct: 622 tccccgcatcagttcagcttccttcatcttagcctcctcttctgcttgttggcgttcctt 563 Query: 424 tctaagcctgtcctcagctctttcttttttaatcctttcaagctctgccattag 477 |||||| | || |||||||||||||| || || |||||||||||||||||||| Sbjct: 562 tctaaggttttcttcagctctttctttcttgattctttcaagctctgccattag 509
>dbj|AK111784.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023086E16, full insert sequence Length = 1151 Score = 361 bits (182), Expect = 1e-96 Identities = 266/294 (90%) Strand = Plus / Minus Query: 184 gcagcatcatttcatgtacctatgcagaaacttgcggtggaaatcacttctgatggtgtc 243 ||||||||| ||||||||||| ||||||||||| |||||||||||||||||||| ||||| Sbjct: 801 gcagcatcacttcatgtacctctgcagaaacttacggtggaaatcacttctgatagtgtc 742 Query: 244 gttgatgaaccgtttcggtgtcttggtctctccacgggcctggttcttgaatacaacatc 303 ||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 741 gttgatgaaacgtttcggtgtcttggtctctccacgagcctggttcttgaatacaacatc 682 Query: 304 atcatcccaccttctcttcacgttgaaggagccggagttattcatattgatcagcgggtt 363 |||||||||||||||||| || |||||||| |||| ||| || ||||||||||| ||||| Sbjct: 681 atcatcccaccttctcttaacattgaaggatccggcgttgttaatattgatcagggggtt 622 Query: 364 tcctcgcatcagctcagcctccttcatcttggcctcttcttctgcttgctgacgctcctt 423 ||| |||||||| ||||| ||||||||||| ||||| ||||||||||| || || ||||| Sbjct: 621 tccccgcatcagttcagcttccttcatcttagcctcctcttctgcttgttggcgttcctt 562 Query: 424 tctaagcctgtcctcagctctttcttttttaatcctttcaagctctgccattag 477 |||||| | || |||||||||||||| || || |||||||||||||||||||| Sbjct: 561 tctaaggttttcttcagctctttctttcttgattctttcaagctctgccattag 508
>gb|AY596522.1| Saccharum officinarum clone SCQGLR1019B07, complete sequence Length = 997 Score = 321 bits (162), Expect = 1e-84 Identities = 258/290 (88%) Strand = Plus / Minus Query: 188 catcatttcatgtacctatgcagaaacttgcggtggaaatcacttctgatggtgtcgttg 247 ||||| ||||||||||| || ||||| || |||||||||||||| |||||||| |||||| Sbjct: 747 catcacttcatgtacctctgaagaaatttacggtggaaatcactcctgatggtatcgttg 688 Query: 248 atgaaccgtttcggtgtcttggtctctccacgggcctggttcttgaatacaacatcatca 307 |||||||||||||||||||||||||||||||| || ||||||||||| || |||||||| Sbjct: 687 atgaaccgtttcggtgtcttggtctctccacgtgcttggttcttgaaaaccacatcatcg 628 Query: 308 tcccaccttctcttcacgttgaaggagccggagttattcatattgatcagcgggtttcct 367 |||||||||||||| || |||||||||| | || || ||||| |||| |||||||| Sbjct: 627 tcccaccttctcttaacactgaaggagccaggattgttgatattaatcaaagggtttccc 568 Query: 368 cgcatcagctcagcctccttcatcttggcctcttcttctgcttgctgacgctcctttcta 427 |||||||| ||||||||||||||||||||||| ||||||||||| || |||||||||||| Sbjct: 567 cgcatcagttcagcctccttcatcttggcctcctcttctgcttgttgccgctcctttcta 508 Query: 428 agcctgtcctcagctctttcttttttaatcctttcaagctctgccattag 477 ||| | ||||||||||||||||| |||||||| ||||||||||||||||| Sbjct: 507 agcttctcctcagctctttctttcttaatcctctcaagctctgccattag 458
>gb|AY105042.1| Zea mays PCO098401 mRNA sequence Length = 1154 Score = 301 bits (152), Expect = 1e-78 Identities = 251/284 (88%) Strand = Plus / Minus Query: 194 ttcatgtacctatgcagaaacttgcggtggaaatcacttctgatggtgtcgttgatgaac 253 ||||||||||| || ||||| || |||||||||||||| ||||||||||||||||||||| Sbjct: 839 ttcatgtacctctgaagaaatttacggtggaaatcactcctgatggtgtcgttgatgaac 780 Query: 254 cgtttcggtgtcttggtctctccacgggcctggttcttgaatacaacatcatcatcccac 313 ||||||||||||||||||||||| || || || ||||||||||| || || || |||||| Sbjct: 779 cgtttcggtgtcttggtctctcctcgtgcttgattcttgaataccacgtcgtcgtcccac 720 Query: 314 cttctcttcacgttgaaggagccggagttattcatattgatcagcgggtttcctcgcatc 373 |||||||| || |||||||||| | || || ||||| |||| ||||||||| |||||| Sbjct: 719 cttctcttaacactgaaggagccagcattgttgatattaatcaacgggtttccccgcatc 660 Query: 374 agctcagcctccttcatcttggcctcttcttctgcttgctgacgctcctttctaagcctg 433 || ||||||||||||||||||||||| ||||||||||| || ||||||||||||||| | Sbjct: 659 agttcagcctccttcatcttggcctcctcttctgcttgttgccgctcctttctaagcttc 600 Query: 434 tcctcagctctttcttttttaatcctttcaagctctgccattag 477 ||||| ||||||||||| |||||||| ||||||||||||||||| Sbjct: 599 tcctcggctctttctttcttaatcctctcaagctctgccattag 556
>gb|BT017404.1| Zea mays clone EL01N0329H05.c mRNA sequence Length = 866 Score = 278 bits (140), Expect = 2e-71 Identities = 248/284 (87%) Strand = Plus / Minus Query: 194 ttcatgtacctatgcagaaacttgcggtggaaatcacttctgatggtgtcgttgatgaac 253 ||||||||||| || ||||| || ||| |||||||||| ||||||| ||||||||||||| Sbjct: 674 ttcatgtacctctgaagaaatttacgggggaaatcactcctgatggggtcgttgatgaac 615 Query: 254 cgtttcggtgtcttggtctctccacgggcctggttcttgaatacaacatcatcatcccac 313 |||||||| |||||||||||||| || || || ||||||||||| || || || |||||| Sbjct: 614 cgtttcggggtcttggtctctcctcgtgcttgattcttgaataccacgtcgtcgtcccac 555 Query: 314 cttctcttcacgttgaaggagccggagttattcatattgatcagcgggtttcctcgcatc 373 |||||||| || |||||||||| | || || ||||| |||| ||||||||| |||||| Sbjct: 554 cttctcttaacactgaaggagccagcattgttgatattaatcaccgggtttccccgcatc 495 Query: 374 agctcagcctccttcatcttggcctcttcttctgcttgctgacgctcctttctaagcctg 433 || ||||||||||||||||||||||| ||||||||||| || ||||||||||||||| | Sbjct: 494 agttcagcctccttcatcttggcctcctcttctgcttgttgccgctcctttctaagcttc 435 Query: 434 tcctcagctctttcttttttaatcctttcaagctctgccattag 477 ||||| ||||||||||| |||||||| ||||||||||||||||| Sbjct: 434 tcctcggctctttctttcttaatcctctcaagctctgccattag 391
>gb|AF149812.1| Oryza sativa predicted protein gene, complete cds Length = 1250 Score = 214 bits (108), Expect = 2e-52 Identities = 126/132 (95%) Strand = Plus / Plus Query: 184 gcagcatcatttcatgtacctatgcagaaacttgcggtggaaatcacttctgatggtgtc 243 ||||||||| ||||||||||| ||||||||||| |||||||||||||||||||| ||||| Sbjct: 823 gcagcatcacttcatgtacctctgcagaaacttacggtggaaatcacttctgatagtgtc 882 Query: 244 gttgatgaaccgtttcggtgtcttggtctctccacgggcctggttcttgaatacaacatc 303 ||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 883 gttgatgaaacgtttcggtgtcttggtctctccacgagcctggttcttgaatacaacatc 942 Query: 304 atcatcccacct 315 |||||||||||| Sbjct: 943 atcatcccacct 954 Score = 79.8 bits (40), Expect = 8e-12 Identities = 70/80 (87%) Strand = Plus / Plus Query: 312 accttctcttcacgttgaaggagccggagttattcatattgatcagcgggtttcctcgca 371 |||||||||| || |||||||| |||| ||| || ||||||||||| |||||||| |||| Sbjct: 1047 accttctcttaacattgaaggatccggcgttgttaatattgatcagggggtttccccgca 1106 Query: 372 tcagctcagcctccttcatc 391 |||| ||||| ||||||||| Sbjct: 1107 tcagttcagcttccttcatc 1126
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 214 bits (108), Expect = 2e-52 Identities = 126/132 (95%) Strand = Plus / Plus Query: 184 gcagcatcatttcatgtacctatgcagaaacttgcggtggaaatcacttctgatggtgtc 243 ||||||||| ||||||||||| ||||||||||| |||||||||||||||||||| ||||| Sbjct: 412669 gcagcatcacttcatgtacctctgcagaaacttacggtggaaatcacttctgatagtgtc 412728 Query: 244 gttgatgaaccgtttcggtgtcttggtctctccacgggcctggttcttgaatacaacatc 303 ||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 412729 gttgatgaaacgtttcggtgtcttggtctctccacgagcctggttcttgaatacaacatc 412788 Query: 304 atcatcccacct 315 |||||||||||| Sbjct: 412789 atcatcccacct 412800 Score = 103 bits (52), Expect = 5e-19 Identities = 88/100 (88%) Strand = Plus / Plus Query: 312 accttctcttcacgttgaaggagccggagttattcatattgatcagcgggtttcctcgca 371 |||||||||| || |||||||| |||| ||| || ||||||||||| |||||||| |||| Sbjct: 412889 accttctcttaacattgaaggatccggcgttgttaatattgatcagggggtttccccgca 412948 Query: 372 tcagctcagcctccttcatcttggcctcttcttctgcttg 411 |||| ||||| ||||||||||| ||||| ||||||||||| Sbjct: 412949 tcagttcagcttccttcatcttagcctcctcttctgcttg 412988 Score = 60.0 bits (30), Expect = 7e-06 Identities = 51/58 (87%) Strand = Plus / Plus Query: 420 cctttctaagcctgtcctcagctctttcttttttaatcctttcaagctctgccattag 477 |||||||||| | || |||||||||||||| || || |||||||||||||||||||| Sbjct: 413103 cctttctaaggttttcttcagctctttctttcttgattctttcaagctctgccattag 413160
>dbj|AP001129.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0644B06 Length = 194509 Score = 214 bits (108), Expect = 2e-52 Identities = 126/132 (95%) Strand = Plus / Plus Query: 184 gcagcatcatttcatgtacctatgcagaaacttgcggtggaaatcacttctgatggtgtc 243 ||||||||| ||||||||||| ||||||||||| |||||||||||||||||||| ||||| Sbjct: 122622 gcagcatcacttcatgtacctctgcagaaacttacggtggaaatcacttctgatagtgtc 122681 Query: 244 gttgatgaaccgtttcggtgtcttggtctctccacgggcctggttcttgaatacaacatc 303 ||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 122682 gttgatgaaacgtttcggtgtcttggtctctccacgagcctggttcttgaatacaacatc 122741 Query: 304 atcatcccacct 315 |||||||||||| Sbjct: 122742 atcatcccacct 122753 Score = 103 bits (52), Expect = 5e-19 Identities = 88/100 (88%) Strand = Plus / Plus Query: 312 accttctcttcacgttgaaggagccggagttattcatattgatcagcgggtttcctcgca 371 |||||||||| || |||||||| |||| ||| || ||||||||||| |||||||| |||| Sbjct: 122842 accttctcttaacattgaaggatccggcgttgttaatattgatcagggggtttccccgca 122901 Query: 372 tcagctcagcctccttcatcttggcctcttcttctgcttg 411 |||| ||||| ||||||||||| ||||| ||||||||||| Sbjct: 122902 tcagttcagcttccttcatcttagcctcctcttctgcttg 122941 Score = 60.0 bits (30), Expect = 7e-06 Identities = 51/58 (87%) Strand = Plus / Plus Query: 420 cctttctaagcctgtcctcagctctttcttttttaatcctttcaagctctgccattag 477 |||||||||| | || |||||||||||||| || || |||||||||||||||||||| Sbjct: 123056 cctttctaaggttttcttcagctctttctttcttgattctttcaagctctgccattag 123113
>dbj|AP006399.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT22I23, TM0281a, complete sequence Length = 20838 Score = 71.9 bits (36), Expect = 2e-09 Identities = 81/96 (84%) Strand = Plus / Minus Query: 220 gtggaaatcacttctgatggtgtcgttgatgaaccgtttcggtgtcttggtctctccacg 279 |||||||||| | |||||||| || || ||||| || ||| ||| ||||| || ||||| Sbjct: 17820 gtggaaatcattcctgatggtatcattaatgaatcgcttcagtgccttggcttcaccacg 17761 Query: 280 ggcctggttcttgaatacaacatcatcatcccacct 315 ||| |||||||| || |||||||||||||||||||| Sbjct: 17760 ggcttggttcttaaacacaacatcatcatcccacct 17725
>ref|NM_112160.2| Arabidopsis thaliana unknown protein AT3G13200 mRNA, complete cds Length = 964 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Minus Query: 275 ccacgggcctggttcttgaatacaacatcatcatcccacct 315 ||||| |||||||| |||||||||||||||||||||||||| Sbjct: 722 ccacgtgcctggtttttgaatacaacatcatcatcccacct 682
>gb|AF083766.1| Arabidopsis thaliana clone sps694 unknown mRNA Length = 457 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 275 ccacgggcctggttcttgaatacaacatcatcatcccacct 315 ||||| |||||||| |||||||||||||||||||||||||| Sbjct: 206 ccacgtgcctggtttttgaatacaacatcatcatcccacct 246
>gb|AY072487.1| Arabidopsis thaliana unknown protein (At3g13220; MJG19.16) mRNA, complete cds Length = 773 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Minus Query: 275 ccacgggcctggttcttgaatacaacatcatcatcccacct 315 ||||| |||||||| |||||||||||||||||||||||||| Sbjct: 608 ccacgtgcctggtttttgaatacaacatcatcatcccacct 568
>gb|AY054673.1| Arabidopsis thaliana Unknown protein (At3g13220; MJG19.16) mRNA, complete cds Length = 943 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Minus Query: 275 ccacgggcctggttcttgaatacaacatcatcatcccacct 315 ||||| |||||||| |||||||||||||||||||||||||| Sbjct: 717 ccacgtgcctggtttttgaatacaacatcatcatcccacct 677
>gb|AY086234.1| Arabidopsis thaliana clone 22807 mRNA, complete sequence Length = 950 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Minus Query: 275 ccacgggcctggttcttgaatacaacatcatcatcccacct 315 ||||| |||||||| |||||||||||||||||||||||||| Sbjct: 722 ccacgtgcctggtttttgaatacaacatcatcatcccacct 682
>dbj|AP000375.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone:MJG19 Length = 62948 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Minus Query: 275 ccacgggcctggttcttgaatacaacatcatcatcccacct 315 ||||| |||||||| |||||||||||||||||||||||||| Sbjct: 53257 ccacgtgcctggtttttgaatacaacatcatcatcccacct 53217
>ref|XM_533974.2| PREDICTED: Canis familiaris similar to RIKEN cDNA 0610040D20 (LOC476768), mRNA Length = 1450 Score = 60.0 bits (30), Expect = 7e-06 Identities = 42/46 (91%) Strand = Plus / Minus Query: 286 gttcttgaatacaacatcatcatcccaccttctcttcacgttgaag 331 ||||||||| ||||||||||||||||||||||| || || |||||| Sbjct: 594 gttcttgaaaacaacatcatcatcccaccttcttttaactttgaag 549 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 437 tcagctctttcttttttaat 456 |||||||||||||||||||| Sbjct: 431 tcagctctttcttttttaat 412
>ref|XM_533756.2| PREDICTED: Canis familiaris similar to RIKEN cDNA 0610040D20 (LOC476550), mRNA Length = 1524 Score = 60.0 bits (30), Expect = 7e-06 Identities = 42/46 (91%) Strand = Plus / Minus Query: 286 gttcttgaatacaacatcatcatcccaccttctcttcacgttgaag 331 ||||||||| ||||||||||||||||||||||| || || |||||| Sbjct: 665 gttcttgaaaacaacatcatcatcccaccttcttttaactttgaag 620 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 437 tcagctctttcttttttaat 456 |||||||||||||||||||| Sbjct: 502 tcagctctttcttttttaat 483
>emb|CR857672.1| Pongo pygmaeus mRNA; cDNA DKFZp469C0617 (from clone DKFZp469C0617) Length = 830 Score = 60.0 bits (30), Expect = 7e-06 Identities = 42/46 (91%) Strand = Plus / Minus Query: 286 gttcttgaatacaacatcatcatcccaccttctcttcacgttgaag 331 ||||||||| ||||||||||||||||||||||| || || |||||| Sbjct: 676 gttcttgaagacaacatcatcatcccaccttcttttaactttgaag 631 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 437 tcagctctttcttttttaat 456 |||||||||||||||||||| Sbjct: 513 tcagctctttcttttttaat 494
>gb|BT013311.1| Lycopersicon esculentum clone 134984R, mRNA sequence Length = 983 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 284 tggttcttgaatacaacatcatcatcccaccttctcttcac 324 ||||||||||| || ||||||||||||||||||| |||||| Sbjct: 687 tggttcttgaaaactacatcatcatcccaccttcgcttcac 647
>emb|BX823170.1|CNS0A5W9 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB95ZA12 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 879 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 275 ccacgggcctggttcttgaatacaacatcatcatcccacct 315 ||||| |||||| | |||||||||||||||||||||||||| Sbjct: 701 ccacgtgcctgggttttgaatacaacatcatcatcccacct 661
>ref|NM_001002050.1| Danio rerio zgc:86607 (zgc:86607), mRNA Length = 1077 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 286 gttcttgaatacaacatcatcatcccaccttctcttcacgttgaa 330 |||||| || ||||| |||||||||||||||||||||||| |||| Sbjct: 791 gttcttaaacacaacgtcatcatcccaccttctcttcacgctgaa 747
>gb|BC071310.1| Danio rerio zgc:86607, mRNA (cDNA clone MGC:86607 IMAGE:6892202), complete cds Length = 1077 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 286 gttcttgaatacaacatcatcatcccaccttctcttcacgttgaa 330 |||||| || ||||| |||||||||||||||||||||||| |||| Sbjct: 791 gttcttaaacacaacgtcatcatcccaccttctcttcacgctgaa 747
>dbj|AK112060.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-112-F11, full insert sequence Length = 538 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Minus Query: 438 cagctctttcttttttaatcctttcaagctctgccattag 477 ||||||||||||| || || |||||||||||||||||||| Sbjct: 538 cagctctttctttcttgattctttcaagctctgccattag 499
>gb|AC138087.17| Medicago truncatula clone mth2-22p8, complete sequence Length = 130194 Score = 54.0 bits (27), Expect = 4e-04 Identities = 78/95 (82%) Strand = Plus / Plus Query: 221 tggaaatcacttctgatggtgtcgttgatgaaccgtttcggtgtcttggtctctccacgg 280 ||||||||| | ||||||||||| |||||||| || || | ||| || ||||||||| Sbjct: 48423 tggaaatcattcctgatggtgtcattgatgaatcgctttgcgagctttgtttctccacgg 48482 Query: 281 gcctggttcttgaatacaacatcatcatcccacct 315 || || || ||||| || ||||||||||||||||| Sbjct: 48483 gcttgatttttgaacaccacatcatcatcccacct 48517
>ref|XM_508705.1| PREDICTED: Pan troglodytes similar to hypothetical protein HSPC148 (LOC451493), mRNA Length = 733 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Minus Query: 286 gttcttgaatacaacatcatcatcccaccttctcttcacgttgaag 331 ||||||||| ||||| ||||||||||||||||| || || |||||| Sbjct: 588 gttcttgaagacaacgtcatcatcccaccttcttttaactttgaag 543 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 437 tcagctctttcttttttaat 456 |||||||||||||||||||| Sbjct: 425 tcagctctttcttttttaat 406
>gb|DQ216702.1| Taeniopygia guttata clone 0065P0010A06 RIKEN cDNA 0610040D20 variant 2-like mRNA, complete sequence Length = 1084 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 286 gttcttgaatacaacatcatcatcccacct 315 ||||||||| |||||||||||||||||||| Sbjct: 654 gttcttgaagacaacatcatcatcccacct 625
>ref|XM_615292.2| PREDICTED: Bos taurus similar to RIKEN cDNA 0610040D20, transcript variant 1 (LOC535258), mRNA Length = 1631 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Minus Query: 286 gttcttgaatacaacatcatcatcccaccttctcttcacgttgaag 331 ||||||||| ||||| ||||||||||||||||| || || |||||| Sbjct: 1198 gttcttgaaaacaacgtcatcatcccaccttcttttaactttgaag 1153 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 437 tcagctctttcttttttaat 456 |||||||||||||||||||| Sbjct: 1035 tcagctctttcttttttaat 1016
>ref|XM_878057.1| PREDICTED: Bos taurus similar to RIKEN cDNA 0610040D20, transcript variant 3 (LOC535258), mRNA Length = 679 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Minus Query: 286 gttcttgaatacaacatcatcatcccaccttctcttcacgttgaag 331 ||||||||| ||||| ||||||||||||||||| || || |||||| Sbjct: 248 gttcttgaaaacaacgtcatcatcccaccttcttttaactttgaag 203
>ref|XM_866245.1| PREDICTED: Bos taurus similar to RIKEN cDNA 0610040D20, transcript variant 2 (LOC535258), mRNA Length = 1098 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Minus Query: 286 gttcttgaatacaacatcatcatcccaccttctcttcacgttgaag 331 ||||||||| ||||| ||||||||||||||||| || || |||||| Sbjct: 665 gttcttgaaaacaacgtcatcatcccaccttcttttaactttgaag 620 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 437 tcagctctttcttttttaat 456 |||||||||||||||||||| Sbjct: 502 tcagctctttcttttttaat 483
>gb|BC105398.1| Bos taurus similar to RIKEN cDNA 0610040D20, transcript variant 1, mRNA (cDNA clone MGC:128364 IMAGE:7986525), complete cds Length = 1200 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Minus Query: 286 gttcttgaatacaacatcatcatcccaccttctcttcacgttgaag 331 ||||||||| ||||| ||||||||||||||||| || || |||||| Sbjct: 750 gttcttgaaaacaacgtcatcatcccaccttcttttaactttgaag 705 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 437 tcagctctttcttttttaat 456 |||||||||||||||||||| Sbjct: 587 tcagctctttcttttttaat 568
>emb|CR599874.1| full-length cDNA clone CS0DI006YO02 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1049 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Minus Query: 286 gttcttgaatacaacatcatcatcccaccttctcttcacgttgaag 331 ||||||||| ||||| ||||||||||||||||| || || |||||| Sbjct: 953 gttcttgaagacaacgtcatcatcccaccttcttttaactttgaag 908 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 437 tcagctctttcttttttaat 456 |||||||||||||||||||| Sbjct: 791 tcagctctttcttttttaat 772
>emb|CR600216.1| full-length cDNA clone CS0CAP005YJ03 of Thymus of Homo sapiens (human) Length = 1078 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Minus Query: 286 gttcttgaatacaacatcatcatcccaccttctcttcacgttgaag 331 ||||||||| ||||| ||||||||||||||||| || || |||||| Sbjct: 959 gttcttgaagacaacgtcatcatcccaccttcttttaactttgaag 914 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 437 tcagctctttcttttttaat 456 |||||||||||||||||||| Sbjct: 797 tcagctctttcttttttaat 778
>emb|CR596277.1| full-length cDNA clone CS0DK001YP14 of HeLa cells Cot 25-normalized of Homo sapiens (human) Length = 772 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Minus Query: 286 gttcttgaatacaacatcatcatcccaccttctcttcacgttgaag 331 ||||||||| ||||| ||||||||||||||||| || || |||||| Sbjct: 624 gttcttgaagacaacgtcatcatcccaccttcttttaactttgaag 579 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 437 tcagctctttcttttttaat 456 |||||||||||||||||||| Sbjct: 462 tcagctctttcttttttaat 443
>gb|AF161497.1|AF161497 Homo sapiens HSPC148 mRNA, complete cds Length = 1046 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Minus Query: 286 gttcttgaatacaacatcatcatcccaccttctcttcacgttgaag 331 ||||||||| ||||| ||||||||||||||||| || || |||||| Sbjct: 651 gttcttgaagacaacgtcatcatcccaccttcttttaactttgaag 606 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 437 tcagctctttcttttttaat 456 |||||||||||||||||||| Sbjct: 488 tcagctctttcttttttaat 469
>ref|XM_226872.2| PREDICTED: Rattus norvegicus similar to RIKEN cDNA 0610040D20 (LOC310177), mRNA Length = 787 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Minus Query: 286 gttcttgaatacaacatcatcatcccaccttctcttcacgttgaag 331 |||||| || ||||||||||||||||||||||| || || |||||| Sbjct: 637 gttcttaaaaacaacatcatcatcccaccttcttttaaccttgaag 592
>ref|NM_016403.1| Homo sapiens hypothetical protein HSPC148 (HSPC148), mRNA Length = 1046 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Minus Query: 286 gttcttgaatacaacatcatcatcccaccttctcttcacgttgaag 331 ||||||||| ||||| ||||||||||||||||| || || |||||| Sbjct: 651 gttcttgaagacaacgtcatcatcccaccttcttttaactttgaag 606 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 437 tcagctctttcttttttaat 456 |||||||||||||||||||| Sbjct: 488 tcagctctttcttttttaat 469
>emb|AJ250393.1|HSA250393 Homo sapiens mRNA for chromosome 11 hypothetical protein (ORF5) Length = 839 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Minus Query: 286 gttcttgaatacaacatcatcatcccaccttctcttcacgttgaag 331 ||||||||| ||||| ||||||||||||||||| || || |||||| Sbjct: 668 gttcttgaagacaacgtcatcatcccaccttcttttaactttgaag 623 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 437 tcagctctttcttttttaat 456 |||||||||||||||||||| Sbjct: 505 tcagctctttcttttttaat 486
>gb|AF110775.1|AF110775 Homo sapiens adrenal gland protein AD-002 mRNA, complete cds Length = 804 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Minus Query: 286 gttcttgaatacaacatcatcatcccaccttctcttcacgttgaag 331 ||||||||| ||||| ||||||||||||||||| || || |||||| Sbjct: 651 gttcttgaagacaacgtcatcatcccaccttcttttaactttgaag 606 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 437 tcagctctttcttttttaat 456 |||||||||||||||||||| Sbjct: 488 tcagctctttcttttttaat 469
>gb|AY609443.1| Sus scrofa clone Clu_11713.scr.msk.p1.Contig1, mRNA sequence Length = 1142 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Minus Query: 286 gttcttgaatacaacatcatcatcccaccttctcttcacgttgaag 331 ||||||||| ||||| ||||||||||||||||| || || |||||| Sbjct: 699 gttcttgaaaacaacgtcatcatcccaccttcttttaactttgaag 654
>gb|BC040946.1| Homo sapiens hypothetical protein HSPC148, mRNA (cDNA clone MGC:48787 IMAGE:6067745), complete cds Length = 870 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Minus Query: 286 gttcttgaatacaacatcatcatcccaccttctcttcacgttgaag 331 ||||||||| ||||| ||||||||||||||||| || || |||||| Sbjct: 663 gttcttgaagacaacgtcatcatcccaccttcttttaactttgaag 618 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 437 tcagctctttcttttttaat 456 |||||||||||||||||||| Sbjct: 500 tcagctctttcttttttaat 481
>ref|XM_791937.1| PREDICTED: Strongylocentrotus purpuratus similar to RIKEN cDNA 0610040D20 (LOC592411), mRNA Length = 666 Score = 50.1 bits (25), Expect = 0.007 Identities = 40/45 (88%) Strand = Plus / Minus Query: 287 ttcttgaatacaacatcatcatcccaccttctcttcacgttgaag 331 |||||||| || |||||||||||||||||||| || || |||||| Sbjct: 566 ttcttgaagaccacatcatcatcccaccttcttttgaccttgaag 522
>gb|AY813032.1| Schistosoma japonicum SJCHGC06309 protein mRNA, complete cds Length = 959 Score = 48.1 bits (24), Expect = 0.027 Identities = 27/28 (96%) Strand = Plus / Minus Query: 290 ttgaatacaacatcatcatcccaccttc 317 ||||||||||||||||||||||| |||| Sbjct: 789 ttgaatacaacatcatcatcccatcttc 762
>gb|DQ216701.1| Taeniopygia guttata clone 0061P0011H10 RIKEN cDNA 0610040D20 variant 2-like mRNA, complete sequence Length = 1402 Score = 44.1 bits (22), Expect = 0.42 Identities = 28/30 (93%) Strand = Plus / Minus Query: 286 gttcttgaatacaacatcatcatcccacct 315 ||||||||| |||||||| ||||||||||| Sbjct: 612 gttcttgaagacaacatcgtcatcccacct 583
>emb|BX934467.2| Gallus gallus finished cDNA, clone ChEST974k16 Length = 953 Score = 44.1 bits (22), Expect = 0.42 Identities = 40/46 (86%) Strand = Plus / Minus Query: 286 gttcttgaatacaacatcatcatcccaccttctcttcacgttgaag 331 ||||||||| || |||||||||||||| || || ||||| |||||| Sbjct: 645 gttcttgaagaccacatcatcatcccatctccttttcactttgaag 600
>emb|BX932596.2| Gallus gallus finished cDNA, clone ChEST120g8 Length = 1060 Score = 44.1 bits (22), Expect = 0.42 Identities = 40/46 (86%) Strand = Plus / Minus Query: 286 gttcttgaatacaacatcatcatcccaccttctcttcacgttgaag 331 ||||||||| || |||||||||||||| || || ||||| |||||| Sbjct: 752 gttcttgaagaccacatcatcatcccatctccttttcactttgaag 707
>emb|BX936078.1| Gallus gallus finished cDNA, clone ChEST489e21 Length = 972 Score = 44.1 bits (22), Expect = 0.42 Identities = 40/46 (86%) Strand = Plus / Minus Query: 286 gttcttgaatacaacatcatcatcccaccttctcttcacgttgaag 331 ||||||||| || |||||||||||||| || || ||||| |||||| Sbjct: 664 gttcttgaagaccacatcatcatcccatctccttttcactttgaag 619
>emb|BX004973.10| Mouse DNA sequence from clone RP24-260G16 on chromosome 2, complete sequence Length = 114815 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 448 ttttttaatcctttcaagctct 469 |||||||||||||||||||||| Sbjct: 8503 ttttttaatcctttcaagctct 8482
>dbj|AP002383.3| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-60C6, complete sequence Length = 170142 Score = 44.1 bits (22), Expect = 0.42 Identities = 28/30 (93%) Strand = Plus / Plus Query: 286 gttcttgaatacaacatcatcatcccacct 315 ||||||||| ||||| |||||||||||||| Sbjct: 86459 gttcttgaagacaacgtcatcatcccacct 86488 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 437 tcagctctttcttttttaat 456 |||||||||||||||||||| Sbjct: 92976 tcagctctttcttttttaat 92995
>gb|BC091396.1| Rattus norvegicus hypothetical LOC300361, mRNA (cDNA clone MGC:109502 IMAGE:7323256), complete cds Length = 1376 Score = 44.1 bits (22), Expect = 0.42 Identities = 40/46 (86%) Strand = Plus / Minus Query: 286 gttcttgaatacaacatcatcatcccaccttctcttcacgttgaag 331 |||||| || ||||||||||| ||||||||||| || || |||||| Sbjct: 713 gttcttaaaaacaacatcatcgtcccaccttcttttaaccttgaag 668
>ref|NM_001024987.1| Rattus norvegicus hypothetical LOC300361 (RGD1310669), mRNA Length = 1376 Score = 44.1 bits (22), Expect = 0.42 Identities = 40/46 (86%) Strand = Plus / Minus Query: 286 gttcttgaatacaacatcatcatcccaccttctcttcacgttgaag 331 |||||| || ||||||||||| ||||||||||| || || |||||| Sbjct: 713 gttcttaaaaacaacatcatcgtcccaccttcttttaaccttgaag 668
>gb|AC165441.3| Mus musculus BAC clone RP24-548F24 from chromosome 8, complete sequence Length = 235813 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 441 ctctttcttttttaatccttt 461 ||||||||||||||||||||| Sbjct: 29151 ctctttcttttttaatccttt 29171
>gb|AC125177.4| Mus musculus BAC clone RP23-315H8 from chromosome 8, complete sequence Length = 217567 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1 cacagcaaagcatcagtaata 21 ||||||||||||||||||||| Sbjct: 148289 cacagcaaagcatcagtaata 148269
>gb|AC118474.10| Mus musculus chromosome 8, clone RP23-288O12, complete sequence Length = 191490 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1 cacagcaaagcatcagtaata 21 ||||||||||||||||||||| Sbjct: 165905 cacagcaaagcatcagtaata 165925
>ref|XM_504200.1| Yarrowia lipolytica CLIB122, YALI0E20735g predicted mRNA Length = 1080 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 266 ttggtctctccacgggcctggttct 290 ||||||||||||||| ||||||||| Sbjct: 29 ttggtctctccacggccctggttct 53
>ref|XM_781685.1| PREDICTED: Strongylocentrotus purpuratus similar to RIKEN cDNA 0610040D20 (LOC581697), mRNA Length = 168 Score = 42.1 bits (21), Expect = 1.7 Identities = 39/45 (86%) Strand = Plus / Minus Query: 287 ttcttgaatacaacatcatcatcccaccttctcttcacgttgaag 331 |||||||| || || ||||||||||||||||| || || |||||| Sbjct: 68 ttcttgaagaccacgtcatcatcccaccttcttttgaccttgaag 24
>emb|AL136980.5| Human DNA sequence from clone RP11-207C16 on chromosome 9p23-24.3 Contains a novel gene (contains DKFZp434D105, FLJ12580 and KIAA1432), a novel gene and the 3' end of a novel gene (FLJ23309), complete sequence Length = 169562 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 128 agaaacatcacaggctcttcc 148 ||||||||||||||||||||| Sbjct: 148194 agaaacatcacaggctcttcc 148214
>gb|AC182032.3| Spermophilus tridecemlineatus clone VMRC20-712F8, complete sequence Length = 172253 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 82 aacaaagatattacagttatg 102 ||||||||||||||||||||| Sbjct: 43624 aacaaagatattacagttatg 43644
>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome Length = 4940217 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 235 gatggtgtcgttgatgaaccgtttc 259 |||||||||||||||||| |||||| Sbjct: 1495798 gatggtgtcgttgatgaagcgtttc 1495822
>gb|AC104209.7| Homo sapiens chromosome 18, clone RP11-653G8, complete sequence Length = 210849 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 450 ttttaatcctttcaagctctg 470 ||||||||||||||||||||| Sbjct: 55449 ttttaatcctttcaagctctg 55469
>gb|AC010859.5| Homo sapiens chromosome , clone RP11-3D19, complete sequence Length = 171301 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 83 acaaagatattacagttatgt 103 ||||||||||||||||||||| Sbjct: 155014 acaaagatattacagttatgt 154994
>ref|XM_235542.3| PREDICTED: Rattus norvegicus similar to leucine zipper, down-regulated in cancer 1; breast cancer, up-regulated 1 (predicted) (LOC300114), mRNA Length = 2751 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 2 acagcaaagcatcagtaatat 22 ||||||||||||||||||||| Sbjct: 238 acagcaaagcatcagtaatat 218
>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome Length = 4941439 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 235 gatggtgtcgttgatgaaccgtttc 259 |||||||||||||||||| |||||| Sbjct: 1511311 gatggtgtcgttgatgaagcgtttc 1511335
>dbj|AP006278.1| Homo sapiens genomic DNA, chromosome 8q22.1, clone: KB1573B4, complete sequence Length = 157927 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 83 acaaagatattacagttatgt 103 ||||||||||||||||||||| Sbjct: 111269 acaaagatattacagttatgt 111249
>gb|L77117.1| Methanocaldococcus jannaschii DSM 2661, complete genome Length = 1664970 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 444 tttcttttttaatcctttcaa 464 ||||||||||||||||||||| Sbjct: 1142036 tttcttttttaatcctttcaa 1142016
>emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB 122 of Yarrowia lipolytica Length = 4224103 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 266 ttggtctctccacgggcctggttct 290 ||||||||||||||| ||||||||| Sbjct: 2457003 ttggtctctccacggccctggttct 2456979
>gb|L76098.1|AVIDSBA Azotobacter vinelandii disulfide oxidoreductase (dsbA) gene, complete cds Length = 1029 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 317 ctcttcacgttgaaggagccg 337 ||||||||||||||||||||| Sbjct: 575 ctcttcacgttgaaggagccg 555
>gb|AC131232.12| Mus musculus chromosome 8, clone RP24-376E20, complete sequence Length = 158672 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 441 ctctttcttttttaatccttt 461 ||||||||||||||||||||| Sbjct: 81559 ctctttcttttttaatccttt 81539
>gb|CP000110.1| Synechococcus sp. CC9605, complete genome Length = 2510659 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 380 gcctccttcatcttggcctc 399 |||||||||||||||||||| Sbjct: 80859 gcctccttcatcttggcctc 80840
>ref|XM_526015.1| PREDICTED: Pan troglodytes zinc finger protein, subfamily 1A, 2 (Helios) (LOC470634), mRNA Length = 1683 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 369 gcatcagctcagcctccttc 388 |||||||||||||||||||| Sbjct: 1039 gcatcagctcagcctccttc 1020
>ref|XM_875602.1| PREDICTED: Bos taurus similar to Zinc finger protein Helios, transcript variant 26 (LOC541226), mRNA Length = 2019 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 369 gcatcagctcagcctccttc 388 |||||||||||||||||||| Sbjct: 1075 gcatcagctcagcctccttc 1056
>ref|XM_875526.1| PREDICTED: Bos taurus similar to Zinc finger protein Helios, transcript variant 25 (LOC541226), mRNA Length = 2113 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 369 gcatcagctcagcctccttc 388 |||||||||||||||||||| Sbjct: 1169 gcatcagctcagcctccttc 1150
>ref|XM_875455.1| PREDICTED: Bos taurus similar to Zinc finger protein Helios, transcript variant 24 (LOC541226), mRNA Length = 2010 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 369 gcatcagctcagcctccttc 388 |||||||||||||||||||| Sbjct: 1066 gcatcagctcagcctccttc 1047
>ref|XM_875379.1| PREDICTED: Bos taurus similar to Zinc finger protein Helios, transcript variant 23 (LOC541226), mRNA Length = 1995 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 369 gcatcagctcagcctccttc 388 |||||||||||||||||||| Sbjct: 1051 gcatcagctcagcctccttc 1032
>ref|XM_875308.1| PREDICTED: Bos taurus similar to Zinc finger protein Helios, transcript variant 22 (LOC541226), mRNA Length = 2004 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 369 gcatcagctcagcctccttc 388 |||||||||||||||||||| Sbjct: 1060 gcatcagctcagcctccttc 1041
>ref|XM_875235.1| PREDICTED: Bos taurus similar to Zinc finger protein Helios, transcript variant 21 (LOC541226), mRNA Length = 2004 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 369 gcatcagctcagcctccttc 388 |||||||||||||||||||| Sbjct: 1060 gcatcagctcagcctccttc 1041
>ref|XM_875176.1| PREDICTED: Bos taurus similar to Zinc finger protein Helios, transcript variant 20 (LOC541226), mRNA Length = 2001 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 369 gcatcagctcagcctccttc 388 |||||||||||||||||||| Sbjct: 1057 gcatcagctcagcctccttc 1038
>ref|XM_875100.1| PREDICTED: Bos taurus similar to Zinc finger protein Helios, transcript variant 19 (LOC541226), mRNA Length = 2016 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 369 gcatcagctcagcctccttc 388 |||||||||||||||||||| Sbjct: 1072 gcatcagctcagcctccttc 1053
>ref|XM_875015.1| PREDICTED: Bos taurus similar to Zinc finger protein Helios, transcript variant 18 (LOC541226), mRNA Length = 2046 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 369 gcatcagctcagcctccttc 388 |||||||||||||||||||| Sbjct: 1102 gcatcagctcagcctccttc 1083
>ref|XM_874940.1| PREDICTED: Bos taurus similar to Zinc finger protein Helios, transcript variant 17 (LOC541226), mRNA Length = 1995 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 369 gcatcagctcagcctccttc 388 |||||||||||||||||||| Sbjct: 1051 gcatcagctcagcctccttc 1032
>ref|XM_874859.1| PREDICTED: Bos taurus similar to Zinc finger protein Helios, transcript variant 16 (LOC541226), mRNA Length = 1971 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 369 gcatcagctcagcctccttc 388 |||||||||||||||||||| Sbjct: 1027 gcatcagctcagcctccttc 1008
>ref|XM_874772.1| PREDICTED: Bos taurus similar to Zinc finger protein Helios, transcript variant 15 (LOC541226), mRNA Length = 1971 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 369 gcatcagctcagcctccttc 388 |||||||||||||||||||| Sbjct: 1027 gcatcagctcagcctccttc 1008
>ref|XM_874690.1| PREDICTED: Bos taurus similar to Zinc finger protein Helios, transcript variant 14 (LOC541226), mRNA Length = 1975 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 369 gcatcagctcagcctccttc 388 |||||||||||||||||||| Sbjct: 1031 gcatcagctcagcctccttc 1012
>ref|XM_874602.1| PREDICTED: Bos taurus similar to Zinc finger protein Helios, transcript variant 13 (LOC541226), mRNA Length = 1969 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 369 gcatcagctcagcctccttc 388 |||||||||||||||||||| Sbjct: 1025 gcatcagctcagcctccttc 1006
>ref|XM_874518.1| PREDICTED: Bos taurus similar to Zinc finger protein Helios, transcript variant 12 (LOC541226), mRNA Length = 1875 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 369 gcatcagctcagcctccttc 388 |||||||||||||||||||| Sbjct: 931 gcatcagctcagcctccttc 912
>ref|XM_874445.1| PREDICTED: Bos taurus similar to Zinc finger protein Helios, transcript variant 11 (LOC541226), mRNA Length = 2007 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 369 gcatcagctcagcctccttc 388 |||||||||||||||||||| Sbjct: 1063 gcatcagctcagcctccttc 1044
>ref|XM_874359.1| PREDICTED: Bos taurus similar to Zinc finger protein Helios, transcript variant 10 (LOC541226), mRNA Length = 1995 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 369 gcatcagctcagcctccttc 388 |||||||||||||||||||| Sbjct: 1051 gcatcagctcagcctccttc 1032
>ref|XM_874279.1| PREDICTED: Bos taurus similar to Zinc finger protein Helios, transcript variant 9 (LOC541226), mRNA Length = 1974 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 369 gcatcagctcagcctccttc 388 |||||||||||||||||||| Sbjct: 1030 gcatcagctcagcctccttc 1011
>ref|XM_874195.1| PREDICTED: Bos taurus similar to Zinc finger protein Helios, transcript variant 8 (LOC541226), mRNA Length = 1845 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 369 gcatcagctcagcctccttc 388 |||||||||||||||||||| Sbjct: 901 gcatcagctcagcctccttc 882
>ref|XM_874105.1| PREDICTED: Bos taurus similar to Zinc finger protein Helios, transcript variant 7 (LOC541226), mRNA Length = 1848 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 369 gcatcagctcagcctccttc 388 |||||||||||||||||||| Sbjct: 904 gcatcagctcagcctccttc 885
>ref|XM_874013.1| PREDICTED: Bos taurus similar to Zinc finger protein Helios, transcript variant 6 (LOC541226), mRNA Length = 1980 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 369 gcatcagctcagcctccttc 388 |||||||||||||||||||| Sbjct: 1036 gcatcagctcagcctccttc 1017
>ref|XM_873920.1| PREDICTED: Bos taurus similar to Zinc finger protein Helios, transcript variant 5 (LOC541226), mRNA Length = 1998 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 369 gcatcagctcagcctccttc 388 |||||||||||||||||||| Sbjct: 1054 gcatcagctcagcctccttc 1035
>ref|XM_873824.1| PREDICTED: Bos taurus similar to Zinc finger protein Helios, transcript variant 4 (LOC541226), mRNA Length = 1728 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 369 gcatcagctcagcctccttc 388 |||||||||||||||||||| Sbjct: 784 gcatcagctcagcctccttc 765
>ref|XM_873728.1| PREDICTED: Bos taurus similar to Zinc finger protein Helios, transcript variant 3 (LOC541226), mRNA Length = 2052 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 369 gcatcagctcagcctccttc 388 |||||||||||||||||||| Sbjct: 1108 gcatcagctcagcctccttc 1089
>ref|XM_615142.2| PREDICTED: Bos taurus similar to Zinc finger protein Helios, transcript variant 1 (LOC541226), mRNA Length = 2491 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 369 gcatcagctcagcctccttc 388 |||||||||||||||||||| Sbjct: 1100 gcatcagctcagcctccttc 1081
>gb|AE013133.1| Thermoanaerobacter tengcongensis MB4, section 160 of 244 of the complete genome Length = 12058 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 449 tttttaatcctttcaagctctgcc 472 |||||||||||||||| ||||||| Sbjct: 3017 tttttaatcctttcaaactctgcc 3040
>ref|XM_716407.1| Candida albicans SC5314 cytosolic ribosomal protein S1 (CaO19_3002), mRNA Length = 771 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 443 ctttcttttttaatcctttc 462 |||||||||||||||||||| Sbjct: 58 ctttcttttttaatcctttc 39
>gb|AY587073.1| Homo sapiens helios 1+3a isoform (ZNFN1A2) mRNA, complete cds Length = 1760 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 369 gcatcagctcagcctccttc 388 |||||||||||||||||||| Sbjct: 1116 gcatcagctcagcctccttc 1097
>gb|AY587071.1| Homo sapiens helios del(ex5)v isoform (ZNFN1A2) mRNA, complete cds Length = 1365 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 369 gcatcagctcagcctccttc 388 |||||||||||||||||||| Sbjct: 721 gcatcagctcagcctccttc 702
>gb|AY587070.1| Homo sapiens helios del(ex3,4) isoform (ZNFN1A2) mRNA, complete cds Length = 1146 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 369 gcatcagctcagcctccttc 388 |||||||||||||||||||| Sbjct: 502 gcatcagctcagcctccttc 483
>gb|AY587069.1| Homo sapiens helios 1v isoform (ZNFN1A2) mRNA, complete cds Length = 1503 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 369 gcatcagctcagcctccttc 388 |||||||||||||||||||| Sbjct: 859 gcatcagctcagcctccttc 840
>gb|AY587068.1| Homo sapiens helios 1+5a isoform (ZNFN1A2) mRNA, complete cds Length = 1658 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 369 gcatcagctcagcctccttc 388 |||||||||||||||||||| Sbjct: 1014 gcatcagctcagcctccttc 995
>gb|AY587067.1| Homo sapiens helios del(ex3)+2a isoform (ZNFN1A2) mRNA, complete cds Length = 1398 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 369 gcatcagctcagcctccttc 388 |||||||||||||||||||| Sbjct: 754 gcatcagctcagcctccttc 735
>gb|AY587066.1| Homo sapiens helios del(ex6)v isoform (ZNFN1A2) mRNA, complete cds Length = 1359 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 369 gcatcagctcagcctccttc 388 |||||||||||||||||||| Sbjct: 715 gcatcagctcagcctccttc 696
>gb|AY587065.1| Homo sapiens helios 1v+2a isoform (ZNFN1A2) mRNA, complete cds Length = 1587 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 369 gcatcagctcagcctccttc 388 |||||||||||||||||||| Sbjct: 943 gcatcagctcagcctccttc 924
>gb|AY587064.1| Homo sapiens helios 1+5a,5b isoform (ZNFN1A2) mRNA, complete cds Length = 1780 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 369 gcatcagctcagcctccttc 388 |||||||||||||||||||| Sbjct: 1136 gcatcagctcagcctccttc 1117
>gb|AY587063.1| Homo sapiens helios 1+2b,2c isoform (ZNFN1A2) mRNA, complete cds Length = 1696 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 369 gcatcagctcagcctccttc 388 |||||||||||||||||||| Sbjct: 1052 gcatcagctcagcctccttc 1033
>gb|AY587062.1| Homo sapiens helios 1+2a,2b isoform (ZNFN1A2) mRNA, complete cds Length = 1737 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 369 gcatcagctcagcctccttc 388 |||||||||||||||||||| Sbjct: 1090 gcatcagctcagcctccttc 1071
>gb|AC101737.6| Mus musculus chromosome 1, clone RP23-471L1, complete sequence Length = 235405 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 369 gcatcagctcagcctccttc 388 |||||||||||||||||||| Sbjct: 79344 gcatcagctcagcctccttc 79363
>gb|AC122875.2| Mus musculus BAC clone RP23-113B22 from 5, complete sequence Length = 152406 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 384 ccttcatcttggcctcttcttctg 407 |||| ||||||||||||||||||| Sbjct: 73284 ccttaatcttggcctcttcttctg 73307
>emb|CR716172.2|CNS0GFJP Tetraodon nigroviridis full-length cDNA Length = 920 Score = 40.1 bits (20), Expect = 6.5 Identities = 38/44 (86%) Strand = Plus / Minus Query: 287 ttcttgaatacaacatcatcatcccaccttctcttcacgttgaa 330 |||||||| | |||||| | ||||||||||||||| || ||||| Sbjct: 796 ttcttgaacaaaacatcgtgatcccaccttctcttgactttgaa 753
>gb|BC028936.1| Homo sapiens zinc finger protein, subfamily 1A, 2 (Helios), mRNA (cDNA clone MGC:34330 IMAGE:4540576), complete cds Length = 2018 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 369 gcatcagctcagcctccttc 388 |||||||||||||||||||| Sbjct: 1175 gcatcagctcagcctccttc 1156
>gb|AC131390.3| Homo sapiens chromosome 16 clone RP11-349E19, complete sequence Length = 199827 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 434 tcctcagctctttctttttt 453 |||||||||||||||||||| Sbjct: 79137 tcctcagctctttctttttt 79118
>emb|AL355353.23| Human DNA sequence from clone RP11-385F7 on chromosome 6 Contains the 5' end of the CD2AP gene for CD2-associated protein and three CpG islands, complete sequence Length = 141605 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 442 tctttcttttttaatccttt 461 |||||||||||||||||||| Sbjct: 79925 tctttcttttttaatccttt 79906
>gb|AC098799.2| Homo sapiens BAC clone RP11-642E20 from 4, complete sequence Length = 160712 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 122 gaatacagaaacatcacagg 141 |||||||||||||||||||| Sbjct: 85895 gaatacagaaacatcacagg 85876
>emb|AL646047.9| Mouse DNA sequence from clone RP23-69P8 on chromosome 11 Contains the Myo1g gene for myosin 1G, a novel gene, a ribosomal protein L21 (Rpl21) pseudogene, the 5' end of a novel gene and two CpG islands, complete sequence Length = 93553 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 197 atgtacctatgcagaaactt 216 |||||||||||||||||||| Sbjct: 6766 atgtacctatgcagaaactt 6785
>emb|CR860131.1| Pongo pygmaeus mRNA; cDNA DKFZp469N0319 (from clone DKFZp469N0319) Length = 3245 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 369 gcatcagctcagcctccttc 388 |||||||||||||||||||| Sbjct: 1247 gcatcagctcagcctccttc 1228
>ref|NM_016260.1| Homo sapiens zinc finger protein, subfamily 1A, 2 (Helios) (ZNFN1A2), mRNA Length = 2490 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 369 gcatcagctcagcctccttc 388 |||||||||||||||||||| Sbjct: 1106 gcatcagctcagcctccttc 1087
>gb|AC069368.14| Homo sapiens chromosome 15, clone CTD-2017F17, complete sequence Length = 132080 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 419 tcctttctaagcctgtcctcagct 442 ||||||||||||||| |||||||| Sbjct: 110247 tcctttctaagcctggcctcagct 110224
>gb|AY008294.1| Homo sapiens helios 3 mRNA, complete cds Length = 3551 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 369 gcatcagctcagcctccttc 388 |||||||||||||||||||| Sbjct: 1570 gcatcagctcagcctccttc 1551
>dbj|AK047925.1| Mus musculus 16 days embryo head cDNA, RIKEN full-length enriched library, clone:C130021P08 product:zinc finger protein, subfamily 1A, 2 (Helios), full insert sequence Length = 3103 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 369 gcatcagctcagcctccttc 388 |||||||||||||||||||| Sbjct: 1081 gcatcagctcagcctccttc 1062
>gb|AC108066.3| Homo sapiens BAC clone RP11-521H5 from 2, complete sequence Length = 158599 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 369 gcatcagctcagcctccttc 388 |||||||||||||||||||| Sbjct: 115998 gcatcagctcagcctccttc 116017
>gb|AC154340.3| Mus musculus BAC clone RP23-238B22 from chromosome 14, complete sequence Length = 210115 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 368 cgcatcagctcagcctcctt 387 |||||||||||||||||||| Sbjct: 30072 cgcatcagctcagcctcctt 30053
>ref|NM_001009221.1| Felis catus superfast myosin heavy chain (sMyHC), mRNA Length = 6302 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 375 gctcagcctccttcatcttggcct 398 |||||||||||| ||||||||||| Sbjct: 5423 gctcagcctcctccatcttggcct 5400
>ref|XM_228779.3| PREDICTED: Rattus norvegicus similar to cyclin B3 (LOC317389), mRNA Length = 4101 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 378 cagcctccttcatcttggcc 397 |||||||||||||||||||| Sbjct: 3842 cagcctccttcatcttggcc 3861
>ref|XM_237228.3| PREDICTED: Rattus norvegicus zinc finger protein, subfamily 1A, 2 (Helios) (predicted) (Zfpn1a2_predicted), mRNA Length = 2476 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 369 gcatcagctcagcctccttc 388 |||||||||||||||||||| Sbjct: 1100 gcatcagctcagcctccttc 1081
>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome Length = 4659019 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 247 gatgaaccgtttcggtgtcttggt 270 ||||| |||||||||||||||||| Sbjct: 3109436 gatgacccgtttcggtgtcttggt 3109413
>gb|U51472.2|FCU51472 Felis catus superfast myosin heavy chain (sMyHC) mRNA, complete cds Length = 6302 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 375 gctcagcctccttcatcttggcct 398 |||||||||||| ||||||||||| Sbjct: 5423 gctcagcctcctccatcttggcct 5400
>gb|AF130863.1|AF130863 Homo sapiens zinc finger DNA binding protein Helios mRNA, complete cds Length = 2490 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 369 gcatcagctcagcctccttc 388 |||||||||||||||||||| Sbjct: 1106 gcatcagctcagcctccttc 1087
>gb|AC123705.12| Mus musculus chromosome 12, clone RP23-355K21, complete sequence Length = 217397 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 178 cgtacagcagcatcatttca 197 |||||||||||||||||||| Sbjct: 55519 cgtacagcagcatcatttca 55538
>gb|AE000657.1| Aquifex aeolicus VF5, complete genome Length = 1551335 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 444 tttcttttttaatcctttca 463 |||||||||||||||||||| Sbjct: 1296103 tttcttttttaatcctttca 1296122
>ref|NM_011770.2| Mus musculus zinc finger protein, subfamily 1A, 2 (Helios) (Zfpn1a2), mRNA Length = 3103 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 369 gcatcagctcagcctccttc 388 |||||||||||||||||||| Sbjct: 1081 gcatcagctcagcctccttc 1062
>gb|AF044257.1|AF044257 Mus musculus multi-zinc finger protein helios mRNA, complete cds Length = 1847 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 369 gcatcagctcagcctccttc 388 |||||||||||||||||||| Sbjct: 1114 gcatcagctcagcctccttc 1095
>emb|CT025159.8| Mouse DNA sequence from clone RP23-336K1 on chromosome 14, complete sequence Length = 198530 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 368 cgcatcagctcagcctcctt 387 |||||||||||||||||||| Sbjct: 188583 cgcatcagctcagcctcctt 188564 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,574,677 Number of Sequences: 3902068 Number of extensions: 5574677 Number of successful extensions: 119504 Number of sequences better than 10.0: 133 Number of HSP's better than 10.0 without gapping: 133 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 119197 Number of HSP's gapped (non-prelim): 307 length of query: 483 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 461 effective length of database: 17,147,199,772 effective search space: 7904859094892 effective search space used: 7904859094892 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)