ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart24d06 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY965347.1| Triticum monococcum quinone reductase (QR1) mRNA, complete cds Length = 1329 Score = 246 bits (124), Expect = 5e-62 Identities = 163/176 (92%) Strand = Plus / Minus Query: 221 aagcatcgacgacaatcagctctccatctcaacaacaatcttaccagtggcatggccatc 280 |||||| |||||| ||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 1139 aagcattgacgacgatcagctctccatctcaacgacaatcttaccagtggcatggccatc 1080 Query: 281 gatactgctttgccacgccttgcctgcgtcgctcaaggggaacctcgagtcgatcaccgt 340 ||||||||| |||||||||||| |||| |||||||| ||||| ||||||||| |||||| Sbjct: 1079 gatactgctctgccacgccttgtctgcctcgctcaacaggaacttcgagtcgaccaccgt 1020 Query: 341 cctcagcttgccttccttgagcagcccgaccaagaactccaggtccgccttgttgg 396 | ||||||||||||||||||||| ||| |||||||||||||||||||||||||||| Sbjct: 1019 cttcagcttgccttccttgagcaacccaaccaagaactccaggtccgccttgttgg 964 Score = 69.9 bits (35), Expect = 6e-09 Identities = 66/75 (88%), Gaps = 1/75 (1%) Strand = Plus / Minus Query: 1 aaacaaacgcacaaatgactggtctgtatgtttacatcctacgtattcgtctccactgtc 60 |||||||||||||| ||||| ||||||||| |||||| ||| |||||| ||||| ||| Sbjct: 1222 aaacaaacgcacaagtgactagtctgtatgattacat-ctaagtattcacgtccaccgtc 1164 Query: 61 tgtatgcaagtcctt 75 ||||||||||||||| Sbjct: 1163 tgtatgcaagtcctt 1149
>ref|XM_472171.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1011 Score = 103 bits (52), Expect = 4e-19 Identities = 127/152 (83%) Strand = Plus / Minus Query: 243 tccatctcaacaacaatcttaccagtggcatggccatcgatactgctttgccacgccttg 302 ||||||||||| || ||||| || ||||| ||||| ||||| || | ||||||||||| Sbjct: 1004 tccatctcaacgactatcttgccggtggcgtggccgtcgatgctcttctgccacgccttc 945 Query: 303 cctgcgtcgctcaaggggaacctcgagtcgatcaccgtcctcagcttgccttccttgagc 362 | ||||||| || |||||||||||||| | ||||||||| ||||| |||||| | | Sbjct: 944 gccgcgtcgcccagcgggaacctcgagtccaccaccgtcctgagcttcccttcccccacc 885 Query: 363 agcccgaccaagaactccaggtccgccttgtt 394 ||||||||||||||||||||||| |||||||| Sbjct: 884 agcccgaccaagaactccaggtcggccttgtt 853
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 103 bits (52), Expect = 4e-19 Identities = 127/152 (83%) Strand = Plus / Minus Query: 243 tccatctcaacaacaatcttaccagtggcatggccatcgatactgctttgccacgccttg 302 ||||||||||| || ||||| || ||||| ||||| ||||| || | ||||||||||| Sbjct: 18181957 tccatctcaacgactatcttgccggtggcgtggccgtcgatgctcttctgccacgccttc 18181898 Query: 303 cctgcgtcgctcaaggggaacctcgagtcgatcaccgtcctcagcttgccttccttgagc 362 | ||||||| || |||||||||||||| | ||||||||| ||||| |||||| | | Sbjct: 18181897 gccgcgtcgcccagcgggaacctcgagtccaccaccgtcctgagcttcccttcccccacc 18181838 Query: 363 agcccgaccaagaactccaggtccgccttgtt 394 ||||||||||||||||||||||| |||||||| Sbjct: 18181837 agcccgaccaagaactccaggtcggccttgtt 18181806 Score = 44.1 bits (22), Expect = 0.34 Identities = 22/22 (100%) Strand = Plus / Minus Query: 201 ggacggagggagtactatataa 222 |||||||||||||||||||||| Sbjct: 33721091 ggacggagggagtactatataa 33721070 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 201 ggacggagggagtactatata 221 ||||||||||||||||||||| Sbjct: 27370708 ggacggagggagtactatata 27370728 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 203 acggagggagtactatataa 222 |||||||||||||||||||| Sbjct: 22297448 acggagggagtactatataa 22297429
>emb|AL662979.3|OSJN00179 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0069D17, complete sequence Length = 147111 Score = 103 bits (52), Expect = 4e-19 Identities = 127/152 (83%) Strand = Plus / Minus Query: 243 tccatctcaacaacaatcttaccagtggcatggccatcgatactgctttgccacgccttg 302 ||||||||||| || ||||| || ||||| ||||| ||||| || | ||||||||||| Sbjct: 17631 tccatctcaacgactatcttgccggtggcgtggccgtcgatgctcttctgccacgccttc 17572 Query: 303 cctgcgtcgctcaaggggaacctcgagtcgatcaccgtcctcagcttgccttccttgagc 362 | ||||||| || |||||||||||||| | ||||||||| ||||| |||||| | | Sbjct: 17571 gccgcgtcgcccagcgggaacctcgagtccaccaccgtcctgagcttcccttcccccacc 17512 Query: 363 agcccgaccaagaactccaggtccgccttgtt 394 ||||||||||||||||||||||| |||||||| Sbjct: 17511 agcccgaccaagaactccaggtcggccttgtt 17480
>gb|AY643843.1|AY643842S2 Hordeum vulgare subsp. vulgare clones BAC 519K7 and 799C8 hardness locus region Length = 129099 Score = 75.8 bits (38), Expect = 1e-10 Identities = 56/62 (90%) Strand = Plus / Minus Query: 82 tactccctctgttcataaatacttgtcctaaaaatagatgtatctagatttattttagtt 141 ||||||||| |||| ||||||||||||||||||| ||||||||||| ||||||||||| Sbjct: 31305 tactccctccgttcggaaatacttgtcctaaaaatgaatgtatctagacttattttagtt 31246 Query: 142 at 143 || Sbjct: 31245 at 31244 Score = 56.0 bits (28), Expect = 9e-05 Identities = 34/36 (94%) Strand = Plus / Minus Query: 179 catttctagaacaagtatttccggacggagggagta 214 ||||||||| ||||||||||| |||||||||||||| Sbjct: 31225 catttctaggacaagtatttctggacggagggagta 31190 Score = 48.1 bits (24), Expect = 0.022 Identities = 33/36 (91%) Strand = Plus / Plus Query: 179 catttctagaacaagtatttccggacggagggagta 214 ||||| ||| ||||||||||||| |||||||||||| Sbjct: 31270 catttttaggacaagtatttccgaacggagggagta 31305 Score = 42.1 bits (21), Expect = 1.3 Identities = 33/37 (89%) Strand = Plus / Plus Query: 80 aatactccctctgttcataaatacttgtcctaaaaat 116 ||||||||||| || || |||||||||||||| |||| Sbjct: 31188 aatactccctccgtccagaaatacttgtcctagaaat 31224
>gb|AF474373.1| Hordeum vulgare subsp. vulgare BAC 259I16, complete sequence Length = 124050 Score = 65.9 bits (33), Expect = 9e-08 Identities = 45/49 (91%) Strand = Plus / Plus Query: 98 aaatacttgtcctaaaaatagatgtatctagatttattttagttatgga 146 |||||||||||||||| || ||||||||| |||||||||||||||||| Sbjct: 14600 aaatacttgtcctaaagatgaatgtatctaaatttattttagttatgga 14648 Score = 50.1 bits (25), Expect = 0.005 Identities = 52/61 (85%) Strand = Plus / Minus Query: 81 atactccctctgttcataaatacttgtcctaaaaatagatgtatctagatttattttagt 140 ||||||||||||| | ||||| ||||| || ||| ||||||||||||| ||||||||| Sbjct: 52255 atactccctctgtccggaaatatttgtcataggaatggatgtatctagatgtattttagt 52196 Query: 141 t 141 | Sbjct: 52195 t 52195 Score = 44.1 bits (22), Expect = 0.34 Identities = 25/26 (96%) Strand = Plus / Minus Query: 189 acaagtatttccggacggagggagta 214 ||||||| |||||||||||||||||| Sbjct: 52163 acaagtaattccggacggagggagta 52138 Score = 44.1 bits (22), Expect = 0.34 Identities = 25/26 (96%) Strand = Plus / Minus Query: 189 acaagtatttccggacggagggagta 214 |||||||||||||||||| ||||||| Sbjct: 14609 acaagtatttccggacggggggagta 14584
>gb|AY235469.1| Triticum aestivum nonfunctional FCA-like protein (Fca-2C9) gene, exons 8 through 15, partial sequence Length = 3511 Score = 61.9 bits (31), Expect = 1e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 189 acaagtatttccggacggagggagtactatataag 223 ||||||||||||||||||||||||||||| ||||| Sbjct: 764 acaagtatttccggacggagggagtactacataag 798 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 118 gatgtatctagatttattttagtt 141 ||||||||||||| |||||||||| Sbjct: 753 gatgtatctagatgtattttagtt 730 Score = 40.1 bits (20), Expect = 5.3 Identities = 32/36 (88%) Strand = Plus / Minus Query: 179 catttctagaacaagtatttccggacggagggagta 214 |||||||| |||||||||| |||||||||||||| Sbjct: 708 catttctacgacaagtattttgggacggagggagta 673
>gb|AY235468.1| Triticum aestivum FCA-like protein (Fca-2A3) gene, exons 8 through 15, partial cds Length = 3601 Score = 61.9 bits (31), Expect = 1e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 189 acaagtatttccggacggagggagtactatataag 223 ||||||||||||||||||||||||||||| ||||| Sbjct: 806 acaagtatttccggacggagggagtactacataag 840 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 118 gatgtatctagatttattttagtt 141 ||||||||||||| |||||||||| Sbjct: 795 gatgtatctagatgtattttagtt 772 Score = 40.1 bits (20), Expect = 5.3 Identities = 32/36 (88%) Strand = Plus / Minus Query: 179 catttctagaacaagtatttccggacggagggagta 214 |||||||| |||||||||| |||||||||||||| Sbjct: 750 catttctacgacaagtattttgggacggagggagta 715
>gb|AY235467.1| Triticum aestivum FCA-like protein (Fca-1C5) gene, exons 8 through 15, partial cds Length = 3508 Score = 61.9 bits (31), Expect = 1e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 189 acaagtatttccggacggagggagtactatataag 223 ||||||||||||||||||||||||||||| ||||| Sbjct: 747 acaagtatttccggacggagggagtactacataag 781 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 118 gatgtatctagatttattttagtt 141 ||||||||||||| |||||||||| Sbjct: 736 gatgtatctagatgtattttagtt 713 Score = 40.1 bits (20), Expect = 5.3 Identities = 32/36 (88%) Strand = Plus / Minus Query: 179 catttctagaacaagtatttccggacggagggagta 214 |||||||| |||||||||| |||||||||||||| Sbjct: 691 catttctacgacaagtattttgggacggagggagta 656
>gb|AY235466.1| Triticum aestivum FCA-like protein (Fca-1F10) gene, exons 8 through 15, partial cds Length = 3502 Score = 61.9 bits (31), Expect = 1e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 189 acaagtatttccggacggagggagtactatataag 223 ||||||||||||||||||||||||||||| ||||| Sbjct: 751 acaagtatttccggacggagggagtactacataag 785 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 118 gatgtatctagatttattttagtt 141 ||||||||||||| |||||||||| Sbjct: 740 gatgtatctagatgtattttagtt 717 Score = 40.1 bits (20), Expect = 5.3 Identities = 32/36 (88%) Strand = Plus / Minus Query: 179 catttctagaacaagtatttccggacggagggagta 214 |||||||| |||||||||| |||||||||||||| Sbjct: 695 catttctacgacaagtattttgggacggagggagta 660
>gb|AY235463.1| Triticum aestivum nonfunctional FCA-like protein (Fca-2E11) gene, exons 8 through 15, partial sequence Length = 3592 Score = 61.9 bits (31), Expect = 1e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 189 acaagtatttccggacggagggagtactatataag 223 ||||||||||||||||||||||||||||| ||||| Sbjct: 804 acaagtatttccggacggagggagtactacataag 838 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 118 gatgtatctagatttattttagtt 141 ||||||||||||| |||||||||| Sbjct: 793 gatgtatctagatgtattttagtt 770
>gb|AY235462.1| Triticum aestivum FCA-like protein (Fca-4C5) gene, exons 8 through 15, partial cds Length = 3585 Score = 61.9 bits (31), Expect = 1e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 189 acaagtatttccggacggagggagtactatataag 223 ||||||||||||||||||||||||||||| ||||| Sbjct: 792 acaagtatttccggacggagggagtactacataag 826 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 118 gatgtatctagatttattttagtt 141 ||||||||||||| |||||||||| Sbjct: 781 gatgtatctagatgtattttagtt 758 Score = 40.1 bits (20), Expect = 5.3 Identities = 32/36 (88%) Strand = Plus / Minus Query: 179 catttctagaacaagtatttccggacggagggagta 214 |||||||| |||||||||| |||||||||||||| Sbjct: 736 catttctacgacaagtattttgggacggagggagta 701
>gb|AY235461.1| Triticum aestivum FCA-like protein (Fca-1B8) gene, exons 8 through 15, partial cds Length = 3631 Score = 61.9 bits (31), Expect = 1e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 189 acaagtatttccggacggagggagtactatataag 223 ||||||||||||||||||||||||||||| ||||| Sbjct: 818 acaagtatttccggacggagggagtactacataag 852 Score = 42.1 bits (21), Expect = 1.3 Identities = 54/65 (83%) Strand = Plus / Minus Query: 77 tgtaatactccctctgttcataaatacttgtcctaaaaatagatgtatctagatttattt 136 |||| ||||||||| || | ||||||||||| | ||| ||||||||||||| ||||| Sbjct: 848 tgtagtactccctccgtccggaaatacttgtcgggagaatggatgtatctagatgtattt 789 Query: 137 tagtt 141 ||||| Sbjct: 788 tagtt 784 Score = 40.1 bits (20), Expect = 5.3 Identities = 32/36 (88%) Strand = Plus / Minus Query: 179 catttctagaacaagtatttccggacggagggagta 214 |||||||| |||||||||| |||||||||||||| Sbjct: 762 catttctacgacaagtattttgggacggagggagta 727
>gb|AY235448.1| Triticum aestivum FCA-like protein (Fca-2G10) gene, exons 8 through 15, partial cds Length = 3610 Score = 61.9 bits (31), Expect = 1e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 189 acaagtatttccggacggagggagtactatataag 223 ||||||||||||||||||||||||||||| ||||| Sbjct: 815 acaagtatttccggacggagggagtactacataag 849 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 118 gatgtatctagatttattttagtt 141 ||||||||||||| |||||||||| Sbjct: 804 gatgtatctagatgtattttagtt 781 Score = 40.1 bits (20), Expect = 5.3 Identities = 32/36 (88%) Strand = Plus / Minus Query: 179 catttctagaacaagtatttccggacggagggagta 214 |||||||| |||||||||| |||||||||||||| Sbjct: 759 catttctacgacaagtattttgggacggagggagta 724
>gb|AY235447.1| Triticum aestivum FCA-like protein (Fca-5H8) gene, exons 8 through 15, partial cds Length = 3524 Score = 61.9 bits (31), Expect = 1e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 189 acaagtatttccggacggagggagtactatataag 223 ||||||||||||||||||||||||||||| ||||| Sbjct: 794 acaagtatttccggacggagggagtactacataag 828 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 118 gatgtatctagatttattttagtt 141 ||||||||||||| |||||||||| Sbjct: 783 gatgtatctagatgtattttagtt 760 Score = 40.1 bits (20), Expect = 5.3 Identities = 32/36 (88%) Strand = Plus / Minus Query: 179 catttctagaacaagtatttccggacggagggagta 214 |||||||| |||||||||| |||||||||||||| Sbjct: 738 catttctacgacaagtattttgggacggagggagta 703
>gb|L41869.1|BLYBGQ6 Hordeum vulgare L. beta-glucosidase (BGQ60) gene, complete cds Length = 4152 Score = 61.9 bits (31), Expect = 1e-06 Identities = 55/62 (88%), Gaps = 2/62 (3%) Strand = Plus / Plus Query: 98 aaatacttgtcctaaaaatagatgtatctagatttattttagttatggagatacgtccat 157 |||||||||||| || ||| ||||||||||||| |||||||||||| |||||| ||||| Sbjct: 3030 aaatacttgtccaaagaatggatgtatctagatgtattttagttat--agatacatccat 3087 Query: 158 tt 159 || Sbjct: 3088 tt 3089 Score = 44.1 bits (22), Expect = 0.34 Identities = 25/26 (96%) Strand = Plus / Minus Query: 189 acaagtatttccggacggagggagta 214 ||||||||||||||||| |||||||| Sbjct: 3039 acaagtatttccggacgaagggagta 3014
>gb|AY951945.1| Triticum monococcum TmBAC 60J11 FR-Am2 locus, genomic sequence Length = 103866 Score = 58.0 bits (29), Expect = 2e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 189 acaagtatttccggacggagggagtacta 217 ||||||||||||||||||||||||||||| Sbjct: 93554 acaagtatttccggacggagggagtacta 93582 Score = 54.0 bits (27), Expect = 4e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 189 acaagtatttccggacggagggagtactata 219 |||||||||| |||||||||||||||||||| Sbjct: 93487 acaagtattttcggacggagggagtactata 93457 Score = 44.1 bits (22), Expect = 0.34 Identities = 25/26 (96%) Strand = Plus / Minus Query: 189 acaagtatttccggacggagggagta 214 |||||||||| ||||||||||||||| Sbjct: 37406 acaagtattttcggacggagggagta 37381 Score = 44.1 bits (22), Expect = 0.34 Identities = 28/30 (93%) Strand = Plus / Minus Query: 189 acaagtatttccggacggagggagtactat 218 |||||||||| ||||| ||||||||||||| Sbjct: 36514 acaagtattttcggacagagggagtactat 36485 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 117 agatgtatctagatttattttagt 140 ||||||||||||| |||||||||| Sbjct: 88943 agatgtatctagacttattttagt 88966 Score = 40.1 bits (20), Expect = 5.3 Identities = 50/60 (83%) Strand = Plus / Minus Query: 82 tactccctctgttcataaatacttgtcctaaaaatagatgtatctagatttattttagtt 141 |||||||||||| | ||||||||||| | | || | ||||||||||| |||||||||| Sbjct: 36605 tactccctctgtccgaaaatacttgtcattgagatgggtgtatctagatgtattttagtt 36546
>gb|AY235464.1| Triticum aestivum FCA-like protein (Fca-5A3) gene, exons 8 through 15, partial cds Length = 3593 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 189 acaagtatttccggacggagggagtactatataag 223 |||||||||||||||||||||||||| || ||||| Sbjct: 809 acaagtatttccggacggagggagtattacataag 843 Score = 42.1 bits (21), Expect = 1.3 Identities = 54/65 (83%) Strand = Plus / Minus Query: 77 tgtaatactccctctgttcataaatacttgtcctaaaaatagatgtatctagatttattt 136 |||||||||||||| || | ||||||||||| ||| ||||||||||||| ||||| Sbjct: 839 tgtaatactccctccgtccggaaatacttgtcgggggaatggatgtatctagatgtattt 780 Query: 137 tagtt 141 ||||| Sbjct: 779 tagtt 775 Score = 40.1 bits (20), Expect = 5.3 Identities = 32/36 (88%) Strand = Plus / Minus Query: 179 catttctagaacaagtatttccggacggagggagta 214 |||||||| |||||||||| |||||||||||||| Sbjct: 753 catttctacgacaagtattttgggacggagggagta 718
>emb|AJ459254.1|TAE459254 Triticum aestivum TAA1c gene for fatty acyl coA reductase Length = 2522 Score = 54.0 bits (27), Expect = 4e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 188 aacaagtatttccggacggagggagta 214 ||||||||||||||||||||||||||| Sbjct: 2237 aacaagtatttccggacggagggagta 2263
>gb|AY485644.1| Triticum monococcum phosphatidylserine decarboxylase, ZCCT2, ZCCT1, and SNF2P genes, complete cds; nucellin pseudogene, complete sequence; putative transposase, phosphatidylinositol phosphatidylcholine transfer protein sec14 cytosolic-like protein, and phytochrome P450-like protein genes, complete cds; and unknown genes Length = 438828 Score = 52.0 bits (26), Expect = 0.001 Identities = 26/26 (100%) Strand = Plus / Minus Query: 189 acaagtatttccggacggagggagta 214 |||||||||||||||||||||||||| Sbjct: 203647 acaagtatttccggacggagggagta 203622
>emb|Y14573.1|HVCH4H Hordeum vulgare DNA for chromosome 4H Length = 59748 Score = 52.0 bits (26), Expect = 0.001 Identities = 41/46 (89%) Strand = Plus / Plus Query: 98 aaatacttgtcctaaaaatagatgtatctagatttattttagttat 143 ||||| || ||||||||||| ||||||||||| |||||||| |||| Sbjct: 7662 aaatatttatcctaaaaatacatgtatctagacttattttatttat 7707
>gb|AF325196.1|AF325196 Triticum aestivum PST19 (Pst19), LRR19 (Lrr19), TAK19-1 (Tak19-1), and LRK19 (Lrk19) genes, complete cds Length = 35872 Score = 52.0 bits (26), Expect = 0.001 Identities = 26/26 (100%) Strand = Plus / Minus Query: 189 acaagtatttccggacggagggagta 214 |||||||||||||||||||||||||| Sbjct: 33649 acaagtatttccggacggagggagta 33624
>gb|AY963808.1| Triticum aestivum putative S-locus receptor kinase gene, partial cds; and mitochondrial Mn-superoxide dismutase (MnSOD) gene, complete cds, nuclear gene encoding mitochondrial protein Length = 11304 Score = 52.0 bits (26), Expect = 0.001 Identities = 26/26 (100%) Strand = Plus / Plus Query: 189 acaagtatttccggacggagggagta 214 |||||||||||||||||||||||||| Sbjct: 10825 acaagtatttccggacggagggagta 10850 Score = 44.1 bits (22), Expect = 0.34 Identities = 25/26 (96%) Strand = Plus / Minus Query: 189 acaagtatttccggacggagggagta 214 |||||||||| ||||||||||||||| Sbjct: 10749 acaagtattttcggacggagggagta 10724
>gb|AF521177.1| Hordeum vulgare contig 211252, complete sequence Length = 211664 Score = 50.1 bits (25), Expect = 0.005 Identities = 31/33 (93%) Strand = Plus / Minus Query: 189 acaagtatttccggacggagggagtactatata 221 ||||||||||||||||||||| |||| |||||| Sbjct: 9796 acaagtatttccggacggaggtagtaatatata 9764 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 119 atgtatctagatttattttagttat 143 |||||||||||||||||||| |||| Sbjct: 27383 atgtatctagatttattttaattat 27407 Score = 40.1 bits (20), Expect = 5.3 Identities = 29/32 (90%) Strand = Plus / Minus Query: 183 tctagaacaagtatttccggacggagggagta 214 |||| |||||||||||||| ||||||| |||| Sbjct: 27377 tctaaaacaagtatttccgaacggaggtagta 27346 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 98 aaatacttgtcctaaaaata 117 |||||||||||||||||||| Sbjct: 9870 aaatacttgtcctaaaaata 9851
>gb|AY661558.1| Hordeum vulgare subsp. vulgare eIF4E gene locus, complete sequence Length = 439641 Score = 50.1 bits (25), Expect = 0.005 Identities = 79/96 (82%), Gaps = 2/96 (2%) Strand = Plus / Plus Query: 82 tactccctctgttcataaatacttgtcctaaaaatagatgtatctagatttattttagtt 141 ||||||||| |||| |||||||||| | |||||||| |||||||| |||| ||| | Sbjct: 147574 tactccctccgttcggaaatacttgtttcagaaatagatatatctagacttatcttaata 147633 Query: 142 atggagatacgtccattttgtacatttctaaaacaa 177 || |||||| | ||||||||||||||||| ||||| Sbjct: 147634 at--agatacattcattttgtacatttctagaacaa 147667 Score = 46.1 bits (23), Expect = 0.086 Identities = 26/27 (96%) Strand = Plus / Minus Query: 188 aacaagtatttccggacggagggagta 214 |||||||||||||| |||||||||||| Sbjct: 147600 aacaagtatttccgaacggagggagta 147574
>gb|AF548379.1| Aegilops tauschii isoamylase gene, complete cds Length = 9643 Score = 48.1 bits (24), Expect = 0.022 Identities = 33/36 (91%) Strand = Plus / Plus Query: 179 catttctagaacaagtatttccggacggagggagta 214 ||||||| |||||||| |||||||||||||||||| Sbjct: 6053 catttctgcaacaagtagttccggacggagggagta 6088
>gb|AC151955.2| Populus trichocarpa clone Pop1-041G20, complete sequence Length = 129953 Score = 46.1 bits (23), Expect = 0.086 Identities = 32/35 (91%) Strand = Plus / Plus Query: 252 acaacaatcttaccagtggcatggccatcgatact 286 ||||||||||| || || ||||||||||||||||| Sbjct: 14931 acaacaatcttccctgtagcatggccatcgatact 14965
>gb|AY368673.1| Triticum turgidum HMW-glutenin locus, complete sequence Length = 285506 Score = 46.1 bits (23), Expect = 0.086 Identities = 26/27 (96%) Strand = Plus / Plus Query: 189 acaagtatttccggacggagggagtac 215 |||||||||||||||| |||||||||| Sbjct: 196687 acaagtatttccggacagagggagtac 196713 Score = 44.1 bits (22), Expect = 0.34 Identities = 25/26 (96%) Strand = Plus / Minus Query: 189 acaagtatttccggacggagggagta 214 ||||||||||| |||||||||||||| Sbjct: 196621 acaagtatttcaggacggagggagta 196596 Score = 44.1 bits (22), Expect = 0.34 Identities = 25/26 (96%) Strand = Plus / Minus Query: 189 acaagtatttccggacggagggagta 214 ||||||||||||||||||||| |||| Sbjct: 101870 acaagtatttccggacggaggaagta 101845
>gb|AC137924.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0095K08, complete sequence Length = 180999 Score = 46.1 bits (23), Expect = 0.086 Identities = 23/23 (100%) Strand = Plus / Plus Query: 201 ggacggagggagtactatataag 223 ||||||||||||||||||||||| Sbjct: 132708 ggacggagggagtactatataag 132730
>gb|AC149298.1| Populus trichocarpa clone Pop1-021H24, complete sequence Length = 146635 Score = 46.1 bits (23), Expect = 0.086 Identities = 32/35 (91%) Strand = Plus / Minus Query: 252 acaacaatcttaccagtggcatggccatcgatact 286 ||||||||||| || || ||||||||||||||||| Sbjct: 20057 acaacaatcttccctgtagcatggccatcgatact 20023
>gb|AY533103.1| Triticum aestivum beta-expansin 1 (EXPB1) gene, complete cds Length = 1149 Score = 46.1 bits (23), Expect = 0.086 Identities = 26/27 (96%) Strand = Plus / Minus Query: 189 acaagtatttccggacggagggagtac 215 |||||||||| |||||||||||||||| Sbjct: 228 acaagtattttcggacggagggagtac 202 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 189 acaagtatttccggacggagg 209 ||||||||||||||||||||| Sbjct: 304 acaagtatttccggacggagg 324
>gb|AY785858.1| Hordeum vulgare subsp. vulgare cultivar Optic HvCBF5 (CBF5) mRNA, complete cds Length = 1285 Score = 46.1 bits (23), Expect = 0.086 Identities = 23/23 (100%) Strand = Plus / Plus Query: 80 aatactccctctgttcataaata 102 ||||||||||||||||||||||| Sbjct: 1192 aatactccctctgttcataaata 1214
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 46.1 bits (23), Expect = 0.086 Identities = 23/23 (100%) Strand = Plus / Minus Query: 201 ggacggagggagtactatataag 223 ||||||||||||||||||||||| Sbjct: 7865240 ggacggagggagtactatataag 7865218 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 201 ggacggagggagtactatata 221 ||||||||||||||||||||| Sbjct: 16391827 ggacggagggagtactatata 16391807 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 79 taatactccctctgttcataaata 102 ||||||||||||||||| |||||| Sbjct: 6469175 taatactccctctgttcctaaata 6469198 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 201 ggacggagggagtactatat 220 |||||||||||||||||||| Sbjct: 2840247 ggacggagggagtactatat 2840266
>gb|AF254799.1|AF254799 Hordeum vulgare tonoplast intrinsic protein 1 (TIP1), tonoplast intrinsic protein 2 (TIP2), and Rar1 (Rar1) genes, complete cds Length = 65979 Score = 46.1 bits (23), Expect = 0.086 Identities = 26/27 (96%) Strand = Plus / Minus Query: 101 tacttgtcctaaaaatagatgtatcta 127 |||||||| |||||||||||||||||| Sbjct: 60721 tacttgtcataaaaatagatgtatcta 60695
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 46.1 bits (23), Expect = 0.086 Identities = 23/23 (100%) Strand = Plus / Plus Query: 344 cagcttgccttccttgagcagcc 366 ||||||||||||||||||||||| Sbjct: 2316569 cagcttgccttccttgagcagcc 2316591
>emb|AJ300144.1|HVU300144 Hordeum vulgare srg6 gene for stress responsive gene protein 6, exons 1-11, cultivar Morex Length = 4197 Score = 46.1 bits (23), Expect = 0.086 Identities = 26/27 (96%) Strand = Plus / Plus Query: 81 atactccctctgttcataaatacttgt 107 ||||||||||||||| ||||||||||| Sbjct: 1480 atactccctctgttcctaaatacttgt 1506
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 46.1 bits (23), Expect = 0.086 Identities = 23/23 (100%) Strand = Plus / Minus Query: 201 ggacggagggagtactatataag 223 ||||||||||||||||||||||| Sbjct: 7935327 ggacggagggagtactatataag 7935305 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 201 ggacggagggagtactatata 221 ||||||||||||||||||||| Sbjct: 16482843 ggacggagggagtactatata 16482823 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 79 taatactccctctgttcataaata 102 ||||||||||||||||| |||||| Sbjct: 6535642 taatactccctctgttcctaaata 6535665 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 201 ggacggagggagtactatat 220 |||||||||||||||||||| Sbjct: 2849278 ggacggagggagtactatat 2849297
>gb|AY485643.1| Hordeum vulgare subsp. vulgare BAC 615K1, complete sequence Length = 114996 Score = 44.1 bits (22), Expect = 0.34 Identities = 25/26 (96%) Strand = Plus / Plus Query: 189 acaagtatttccggacggagggagta 214 ||||||| |||||||||||||||||| Sbjct: 69886 acaagtacttccggacggagggagta 69911 Score = 40.1 bits (20), Expect = 5.3 Identities = 32/36 (88%) Strand = Plus / Minus Query: 179 catttctagaacaagtatttccggacggagggagta 214 |||||||| |||| || |||||||||||||||||| Sbjct: 69830 catttctatgacaaataattccggacggagggagta 69795
>gb|AY146587.1| Triticum turgidum subsp. durum BAC 107G22, complete sequence Length = 142018 Score = 44.1 bits (22), Expect = 0.34 Identities = 25/26 (96%) Strand = Plus / Plus Query: 189 acaagtatttccggacggagggagta 214 ||||||||||||||||||||| |||| Sbjct: 113519 acaagtatttccggacggaggaagta 113544 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 118 gatgtatctagatttattttagtt 141 ||||||||||||| |||||||||| Sbjct: 113498 gatgtatctagatgtattttagtt 113475 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 119 atgtatctagatttatttta 138 |||||||||||||||||||| Sbjct: 109477 atgtatctagatttatttta 109496
>emb|CR626933.1| Triticum turgidum Length = 25216 Score = 44.1 bits (22), Expect = 0.34 Identities = 25/26 (96%) Strand = Plus / Plus Query: 189 acaagtatttccggacggagggagta 214 |||||||||| ||||||||||||||| Sbjct: 8899 acaagtattttcggacggagggagta 8924
>emb|CR626929.1| Triticum aestivum Length = 20745 Score = 44.1 bits (22), Expect = 0.34 Identities = 25/26 (96%) Strand = Plus / Plus Query: 189 acaagtatttccggacggagggagta 214 |||||||||| ||||||||||||||| Sbjct: 11613 acaagtattttcggacggagggagta 11638
>emb|AL445676.1| Human DNA sequence from clone RP11-59D5 on chromosome 6 Contains part of the PHF3 gene for PHD finger protein 3, complete sequence Length = 13508 Score = 44.1 bits (22), Expect = 0.34 Identities = 25/26 (96%) Strand = Plus / Minus Query: 119 atgtatctagatttattttagttatg 144 |||||| ||||||||||||||||||| Sbjct: 4240 atgtatttagatttattttagttatg 4215
>emb|AL606608.3|OSJN00056 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0015K02, complete sequence Length = 153623 Score = 44.1 bits (22), Expect = 0.34 Identities = 22/22 (100%) Strand = Plus / Minus Query: 201 ggacggagggagtactatataa 222 |||||||||||||||||||||| Sbjct: 71534 ggacggagggagtactatataa 71513
>gb|AF490468.1| Hordeum vulgare subsp. vulgare cultivar Morex CONSTANS-like protein (CO1) gene, complete cds Length = 4071 Score = 44.1 bits (22), Expect = 0.34 Identities = 22/22 (100%) Strand = Plus / Plus Query: 201 ggacggagggagtactatataa 222 |||||||||||||||||||||| Sbjct: 165 ggacggagggagtactatataa 186
>gb|AF022725.1|AF022725 Hordeum vulgare limit dextrinase (HvLD99) gene, complete cds Length = 12034 Score = 44.1 bits (22), Expect = 0.34 Identities = 25/26 (96%) Strand = Plus / Plus Query: 189 acaagtatttccggacggagggagta 214 ||||||| |||||||||||||||||| Sbjct: 11602 acaagtaattccggacggagggagta 11627
>gb|AF480497.1| Oryza sativa clone BAC 24K23, complete sequence Length = 181577 Score = 44.1 bits (22), Expect = 0.34 Identities = 22/22 (100%) Strand = Plus / Minus Query: 201 ggacggagggagtactatataa 222 |||||||||||||||||||||| Sbjct: 152269 ggacggagggagtactatataa 152248
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 44.1 bits (22), Expect = 0.34 Identities = 25/26 (96%) Strand = Plus / Minus Query: 202 gacggagggagtactatataagcatc 227 |||||||||||||||||||| ||||| Sbjct: 23676840 gacggagggagtactatatatgcatc 23676815 Score = 44.1 bits (22), Expect = 0.34 Identities = 22/22 (100%) Strand = Plus / Minus Query: 202 gacggagggagtactatataag 223 |||||||||||||||||||||| Sbjct: 77034 gacggagggagtactatataag 77013 Score = 40.1 bits (20), Expect = 5.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 75 tttgtaatactccctctgttcataaata 102 ||||| ||||||||||||||| |||||| Sbjct: 20360041 tttgtcatactccctctgttcctaaata 20360068 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 201 ggacggagggagtactatat 220 |||||||||||||||||||| Sbjct: 5845407 ggacggagggagtactatat 5845388 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 201 ggacggagggagtactatat 220 |||||||||||||||||||| Sbjct: 1795731 ggacggagggagtactatat 1795750
>gb|AF186393.2|AF186393 Desulfovibrio desulfuricans nine-heme cytochrome c operon, complete sequence Length = 3929 Score = 44.1 bits (22), Expect = 0.34 Identities = 22/22 (100%) Strand = Plus / Minus Query: 344 cagcttgccttccttgagcagc 365 |||||||||||||||||||||| Sbjct: 1714 cagcttgccttccttgagcagc 1693
>gb|AF459085.1| Hordeum vulgare SNF2P (Snf2P) gene, complete cds Length = 7963 Score = 44.1 bits (22), Expect = 0.34 Identities = 25/26 (96%) Strand = Plus / Plus Query: 189 acaagtatttccggacggagggagta 214 ||||||| |||||||||||||||||| Sbjct: 1838 acaagtacttccggacggagggagta 1863 Score = 40.1 bits (20), Expect = 5.3 Identities = 32/36 (88%) Strand = Plus / Minus Query: 179 catttctagaacaagtatttccggacggagggagta 214 |||||||| |||| || |||||||||||||||||| Sbjct: 1782 catttctatgacaaataattccggacggagggagta 1747
>dbj|AP004643.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1113_A10 Length = 160089 Score = 44.1 bits (22), Expect = 0.34 Identities = 25/26 (96%) Strand = Plus / Minus Query: 202 gacggagggagtactatataagcatc 227 |||||||||||||||||||| ||||| Sbjct: 84436 gacggagggagtactatatatgcatc 84411
>dbj|AP005406.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:B1147B12 Length = 127902 Score = 44.1 bits (22), Expect = 0.34 Identities = 22/22 (100%) Strand = Plus / Minus Query: 202 gacggagggagtactatataag 223 |||||||||||||||||||||| Sbjct: 77034 gacggagggagtactatataag 77013
>gb|AF122049.1|AF122049 Hordeum vulgare tissue-type aleurone limit dextrinase mRNA, complete cds Length = 3429 Score = 44.1 bits (22), Expect = 0.34 Identities = 25/26 (96%) Strand = Plus / Plus Query: 189 acaagtatttccggacggagggagta 214 ||||||| |||||||||||||||||| Sbjct: 3274 acaagtaattccggacggagggagta 3299
>gb|AC149301.1| Solanum demissum chromosome 5 clone PGEC517A09 map MAP_LOC, complete sequence Length = 133983 Score = 42.1 bits (21), Expect = 1.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 81 atactccctctgttcataaatacttgtcc 109 ||||||||||||||| ||| ||||||||| Sbjct: 99136 atactccctctgttcctaattacttgtcc 99108
>gb|AC145383.3| Oryza sativa chromosome 3 BAC OSJNBa0038E17 genomic sequence, complete sequence Length = 141691 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 201 ggacggagggagtactatata 221 ||||||||||||||||||||| Sbjct: 11575 ggacggagggagtactatata 11555
>gb|AC147427.2| Oryza sativa chromosome 3 B1394A07 genomic sequence, complete sequence Length = 175704 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 201 ggacggagggagtactatata 221 ||||||||||||||||||||| Sbjct: 471 ggacggagggagtactatata 491
>gb|AC131343.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0057E15, complete sequence Length = 149035 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 201 ggacggagggagtactatata 221 ||||||||||||||||||||| Sbjct: 32438 ggacggagggagtactatata 32418
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 201 ggacggagggagtactatata 221 ||||||||||||||||||||| Sbjct: 24635389 ggacggagggagtactatata 24635369 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 201 ggacggagggagtactatata 221 ||||||||||||||||||||| Sbjct: 13891005 ggacggagggagtactatata 13890985 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 201 ggacggagggagtactatataagc 224 |||||||||||||| ||||||||| Sbjct: 28615115 ggacggagggagtattatataagc 28615138 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 201 ggacggagggagtactatat 220 |||||||||||||||||||| Sbjct: 16890649 ggacggagggagtactatat 16890668 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 194 tatttccggacggagggagtacta 217 |||||| ||||||||||||||||| Sbjct: 10864333 tatttcgggacggagggagtacta 10864310
>gb|AC114011.5| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0078f20, complete sequence Length = 151042 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 201 ggacggagggagtactatata 221 ||||||||||||||||||||| Sbjct: 132262 ggacggagggagtactatata 132242
>gb|AY137517.1| Hordeum vulgare subsp. vulgare hypersensitive-induced reaction protein 3 (hir3) gene, complete cds Length = 6537 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 119 atgtatctagatttattttagttat 143 ||||||||||| ||||||||||||| Sbjct: 193 atgtatctagacttattttagttat 169
>emb|CT025534.4| M.truncatula DNA sequence from clone MTH2-1H4 on chromosome 3, complete sequence Length = 100991 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 194 tatttccggacggagggagtactat 218 |||||| |||||||||||||||||| Sbjct: 92982 tatttcaggacggagggagtactat 92958
>emb|CR751601.8| Zebrafish DNA sequence from clone CH211-162E3 in linkage group 14, complete sequence Length = 141943 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 61 tgtatgcaagtccttttgtaa 81 ||||||||||||||||||||| Sbjct: 99338 tgtatgcaagtccttttgtaa 99318
>gb|AC135907.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OJ1057D12, from chromosome 3, complete sequence Length = 161676 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 201 ggacggagggagtactatata 221 ||||||||||||||||||||| Sbjct: 120477 ggacggagggagtactatata 120497
>emb|AL607006.4| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0079A21, complete sequence Length = 141787 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 201 ggacggagggagtactatata 221 ||||||||||||||||||||| Sbjct: 105304 ggacggagggagtactatata 105324
>gb|AC121239.34| Medicago truncatula clone mth1-8p19, complete sequence Length = 100985 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 194 tatttccggacggagggagtactat 218 |||||| |||||||||||||||||| Sbjct: 92983 tatttcaggacggagggagtactat 92959
>gb|BT009606.1| Triticum aestivum clone wre1n.pk0091.d5:fis, full insert mRNA sequence Length = 1469 Score = 42.1 bits (21), Expect = 1.3 Identities = 48/57 (84%) Strand = Plus / Plus Query: 82 tactccctctgttcataaatacttgtcctaaaaatagatgtatctagatttatttta 138 ||||||||| ||||| || |||| |||| | |||| |||||||||||| ||||||| Sbjct: 1204 tactccctccgttcagaattactcgtccaagaaatgaatgtatctagatgtatttta 1260
>emb|X13580.1|TAAAM254 Wheat alpha-Amy2/54 gene 5'-region Length = 847 Score = 42.1 bits (21), Expect = 1.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 113 aaatagatgtatctagatttattttagtt 141 |||||||||||||||| | |||||||||| Sbjct: 100 aaatagatgtatctagttgtattttagtt 72
>emb|AL731613.5|OSJN00257 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0065H10, complete sequence Length = 133967 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 201 ggacggagggagtactatata 221 ||||||||||||||||||||| Sbjct: 21862 ggacggagggagtactatata 21882
>gb|AF509746.1| Hordeum vulgare subsp. spontaneum OSU6 receptor-like kinase gene, complete cds Length = 2513 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 201 ggacggagggagtactatata 221 ||||||||||||||||||||| Sbjct: 1323 ggacggagggagtactatata 1303
>gb|AF509745.1| Hordeum vulgare subsp. vulgare Steptoe receptor-like kinase gene, complete cds Length = 2550 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 201 ggacggagggagtactatata 221 ||||||||||||||||||||| Sbjct: 1348 ggacggagggagtactatata 1328
>gb|AF509744.1| Hordeum vulgare subsp. vulgare Morex receptor-like kinase gene, complete cds Length = 4643 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 201 ggacggagggagtactatata 221 ||||||||||||||||||||| Sbjct: 2049 ggacggagggagtactatata 2029
>gb|AC166286.14| Medicago truncatula clone mth2-173c1, complete sequence Length = 114609 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 202 gacggagggagtactatataa 222 ||||||||||||||||||||| Sbjct: 39939 gacggagggagtactatataa 39959
>dbj|AK094945.1| Homo sapiens cDNA FLJ37626 fis, clone BRCOC2014748 Length = 2160 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 158 tttgtacatttctaaaacaaacatt 182 ||||||||||||||| ||||||||| Sbjct: 1525 tttgtacatttctaatacaaacatt 1549
>gb|AC122145.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAa0034B05, complete sequence Length = 125655 Score = 42.1 bits (21), Expect = 1.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 194 tatttccggacggagggagtactatataa 222 ||||| ||||||||||||||| ||||||| Sbjct: 45382 tatttgcggacggagggagtattatataa 45410
>emb|AL732379.5|CNS08C92 Oryza sativa chromosome 3, . BAC OSJNBa0025B02 of library OSJNBa from chromosome 3 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 136470 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 201 ggacggagggagtactatata 221 ||||||||||||||||||||| Sbjct: 67435 ggacggagggagtactatata 67415
>gb|AC097446.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0034B05, complete sequence Length = 175061 Score = 42.1 bits (21), Expect = 1.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 194 tatttccggacggagggagtactatataa 222 ||||| ||||||||||||||| ||||||| Sbjct: 160443 tatttgcggacggagggagtattatataa 160471
>gb|AC078999.4| Homo sapiens chromosome 18, clone RP11-104G8, complete sequence Length = 156593 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 97 taaatacttgtcctaaaaata 117 ||||||||||||||||||||| Sbjct: 85647 taaatacttgtcctaaaaata 85667
>gb|AC091665.3| Oryza sativa chromosome 10 clone OSJNBb0016M10, complete sequence Length = 118101 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 201 ggacggagggagtactatata 221 ||||||||||||||||||||| Sbjct: 29923 ggacggagggagtactatata 29903
>ref|XM_939876.1| PREDICTED: Homo sapiens hypothetical protein LOC285500 (LOC285500), mRNA Length = 2149 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 158 tttgtacatttctaaaacaaacatt 182 ||||||||||||||| ||||||||| Sbjct: 1519 tttgtacatttctaatacaaacatt 1543
>ref|XM_496726.2| PREDICTED: Homo sapiens hypothetical protein LOC285500 (LOC285500), mRNA Length = 2149 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 158 tttgtacatttctaaaacaaacatt 182 ||||||||||||||| ||||||||| Sbjct: 1519 tttgtacatttctaatacaaacatt 1543
>gb|AC090660.3| Homo sapiens chromosome 18, clone RP11-869O1, complete sequence Length = 195156 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 97 taaatacttgtcctaaaaata 117 ||||||||||||||||||||| Sbjct: 17344 taaatacttgtcctaaaaata 17324
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 42.1 bits (21), Expect = 1.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 194 tatttccggacggagggagtactatataa 222 ||||| ||||||||||||||| ||||||| Sbjct: 3388598 tatttgcggacggagggagtattatataa 3388626 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 201 ggacggagggagtactatata 221 ||||||||||||||||||||| Sbjct: 2848891 ggacggagggagtactatata 2848871
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 80 aatactccctctgttcataaa 100 ||||||||||||||||||||| Sbjct: 5299056 aatactccctctgttcataaa 5299076 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 79 taatactccctctgttcataaata 102 |||||||||||| ||||||||||| Sbjct: 15652403 taatactccctccgttcataaata 15652426
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 201 ggacggagggagtactatata 221 ||||||||||||||||||||| Sbjct: 17712659 ggacggagggagtactatata 17712639 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 203 acggagggagtactatataa 222 |||||||||||||||||||| Sbjct: 23562090 acggagggagtactatataa 23562109
>gb|AC011143.6|AC011143 Homo sapiens chromosome 18, clone RP11-1O15, complete sequence Length = 136492 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 97 taaatacttgtcctaaaaata 117 ||||||||||||||||||||| Sbjct: 27374 taaatacttgtcctaaaaata 27354
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 201 ggacggagggagtactatata 221 ||||||||||||||||||||| Sbjct: 24552858 ggacggagggagtactatata 24552838 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 201 ggacggagggagtactatata 221 ||||||||||||||||||||| Sbjct: 13885980 ggacggagggagtactatata 13885960 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 201 ggacggagggagtactatataagc 224 |||||||||||||| ||||||||| Sbjct: 28706439 ggacggagggagtattatataagc 28706462 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 201 ggacggagggagtactatat 220 |||||||||||||||||||| Sbjct: 16884222 ggacggagggagtactatat 16884241 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 194 tatttccggacggagggagtacta 217 |||||| ||||||||||||||||| Sbjct: 10862434 tatttcgggacggagggagtacta 10862411
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 201 ggacggagggagtactatata 221 ||||||||||||||||||||| Sbjct: 19577667 ggacggagggagtactatata 19577647 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 203 acggagggagtactatataagcat 226 |||||||||||||||||| ||||| Sbjct: 21943675 acggagggagtactatattagcat 21943652 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 201 ggacggagggagtactatat 220 |||||||||||||||||||| Sbjct: 18864173 ggacggagggagtactatat 18864192 Score = 40.1 bits (20), Expect = 5.3 Identities = 29/32 (90%) Strand = Plus / Minus Query: 189 acaagtatttccggacggagggagtactatat 220 |||||||||| | |||||||||||||||||| Sbjct: 4101150 acaagtatttgggaacggagggagtactatat 4101119
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 201 ggacggagggagtactatata 221 ||||||||||||||||||||| Sbjct: 41938614 ggacggagggagtactatata 41938594 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 201 ggacggagggagtactatata 221 ||||||||||||||||||||| Sbjct: 37344807 ggacggagggagtactatata 37344827 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 201 ggacggagggagtactatat 220 |||||||||||||||||||| Sbjct: 24219250 ggacggagggagtactatat 24219231
>gb|AC103879.4| Homo sapiens BAC clone RP11-140M13 from 4, complete sequence Length = 27927 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 158 tttgtacatttctaaaacaaacatt 182 ||||||||||||||| ||||||||| Sbjct: 2934 tttgtacatttctaatacaaacatt 2958
>dbj|AP003683.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0431G06 Length = 140466 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 201 ggacggagggagtactatata 221 ||||||||||||||||||||| Sbjct: 40691 ggacggagggagtactatata 40671
>gb|AY089179.1| Arabidopsis thaliana clone 6276 mRNA, complete sequence Length = 1184 Score = 42.1 bits (21), Expect = 1.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 258 atcttaccagtggcatggccatcgatact 286 ||||| ||||| ||||||||||||||||| Sbjct: 1050 atcttcccagtagcatggccatcgatact 1022
>gb|AF258609.1|AF258609 Aegilops tauschii starch synthase III gene, complete cds Length = 11550 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 204 cggagggagtactatataagc 224 ||||||||||||||||||||| Sbjct: 6629 cggagggagtactatataagc 6649
>dbj|AP003611.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0423B08 Length = 151490 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 201 ggacggagggagtactatata 221 ||||||||||||||||||||| Sbjct: 56841 ggacggagggagtactatata 56861
>dbj|AP005739.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0012A04 Length = 150317 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 80 aatactccctctgttcataaa 100 ||||||||||||||||||||| Sbjct: 95769 aatactccctctgttcataaa 95789
>dbj|AP006155.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1012G04 Length = 144644 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 80 aatactccctctgttcataaa 100 ||||||||||||||||||||| Sbjct: 133996 aatactccctctgttcataaa 134016
>dbj|AP003951.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OJ1288_C01 Length = 111223 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 201 ggacggagggagtactatata 221 ||||||||||||||||||||| Sbjct: 90557 ggacggagggagtactatata 90537
>dbj|AP005110.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0605D08 Length = 144340 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 201 ggacggagggagtactatata 221 ||||||||||||||||||||| Sbjct: 43953 ggacggagggagtactatata 43933
>emb|X67566.1|AFAMY254 Avena fatua alpha-Amy2/54 promoter region Length = 423 Score = 42.1 bits (21), Expect = 1.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 113 aaatagatgtatctagatttattttagtt 141 |||||||||||||||| | |||||||||| Sbjct: 33 aaatagatgtatctagttgtattttagtt 5
>dbj|AK068180.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013135E14, full insert sequence Length = 1603 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 201 ggacggagggagtactatata 221 ||||||||||||||||||||| Sbjct: 453 ggacggagggagtactatata 433
>dbj|AK063301.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-113-F03, full insert sequence Length = 2687 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 201 ggacggagggagtactatata 221 ||||||||||||||||||||| Sbjct: 539 ggacggagggagtactatata 519
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 42.1 bits (21), Expect = 1.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 194 tatttccggacggagggagtactatataa 222 ||||| ||||||||||||||| ||||||| Sbjct: 3388519 tatttgcggacggagggagtattatataa 3388547 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 201 ggacggagggagtactatata 221 ||||||||||||||||||||| Sbjct: 2848842 ggacggagggagtactatata 2848822
>ref|NM_114473.4| Arabidopsis thaliana structural constituent of ribosome AT3G46040 mRNA, complete cds Length = 713 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 248 ctcaacaacaatcttaccag 267 |||||||||||||||||||| Sbjct: 282 ctcaacaacaatcttaccag 263
>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome Length = 6438405 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 376 actccaggtccgccttgttg 395 |||||||||||||||||||| Sbjct: 161954 actccaggtccgccttgttg 161935
>gb|AC120529.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0039N21, complete sequence Length = 151732 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 201 ggacggagggagtactatat 220 |||||||||||||||||||| Sbjct: 33653 ggacggagggagtactatat 33672
>gb|AC163683.4| Mus musculus BAC clone RP23-8L20 from chromosome 6, complete sequence Length = 218138 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 61 tgtatgcaagtccttttgta 80 |||||||||||||||||||| Sbjct: 83422 tgtatgcaagtccttttgta 83441
>gb|AC133217.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0052H02, complete sequence Length = 159632 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 201 ggacggagggagtactatat 220 |||||||||||||||||||| Sbjct: 120054 ggacggagggagtactatat 120073
>gb|AC133579.10| Mus musculus chromosome 7, clone RP23-222I22, complete sequence Length = 197206 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 339 gtcctcagcttgccttcctt 358 |||||||||||||||||||| Sbjct: 19513 gtcctcagcttgccttcctt 19532
>gb|AE013005.1| Thermoanaerobacter tengcongensis MB4, section 32 of 244 of the complete genome Length = 10272 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 152 gtccattttgtacatttcta 171 |||||||||||||||||||| Sbjct: 9734 gtccattttgtacatttcta 9753
>gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 complete genome Length = 6397126 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 346 gcttgccttccttgagcagc 365 |||||||||||||||||||| Sbjct: 5150047 gcttgccttccttgagcagc 5150028
>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome Length = 6093698 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 346 gcttgccttccttgagcagc 365 |||||||||||||||||||| Sbjct: 5045360 gcttgccttccttgagcagc 5045341
>gb|AC168204.1| Medicago truncatula chromosome 7 BAC clone mth2-64h15, complete sequence Length = 45758 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 203 acggagggagtactatataa 222 |||||||||||||||||||| Sbjct: 18436 acggagggagtactatataa 18455
>gb|CP000058.1| Pseudomonas syringae pv. phaseolicola 1448A, complete genome Length = 5928787 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 346 gcttgccttccttgagcagc 365 |||||||||||||||||||| Sbjct: 4860945 gcttgccttccttgagcagc 4860926
>emb|BX005403.15| Zebrafish DNA sequence from clone DKEY-81J11 in linkage group 17, complete sequence Length = 74369 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 166 tttctaaaacaaacatttct 185 |||||||||||||||||||| Sbjct: 44052 tttctaaaacaaacatttct 44071
>gb|AC124586.3| Mus musculus BAC clone RP23-132E20 from 12, complete sequence Length = 188243 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 170 taaaacaaacatttctagaa 189 |||||||||||||||||||| Sbjct: 12405 taaaacaaacatttctagaa 12424
>gb|AC100263.9| Mus musculus chromosome 19, clone RP23-66K19, complete sequence Length = 188435 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 167 ttctaaaacaaacatttcta 186 |||||||||||||||||||| Sbjct: 152844 ttctaaaacaaacatttcta 152825
>gb|AC103645.6| Mus musculus chromosome 19, clone RP24-510J20, complete sequence Length = 209224 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 167 ttctaaaacaaacatttcta 186 |||||||||||||||||||| Sbjct: 206333 ttctaaaacaaacatttcta 206352
>gb|AC124951.19| Medicago truncatula clone mth2-7p23, complete sequence Length = 124973 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 201 ggacggagggagtactatat 220 |||||||||||||||||||| Sbjct: 1006 ggacggagggagtactatat 1025
>gb|AC136974.11| Medicago truncatula clone mth2-22e9, complete sequence Length = 124037 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 203 acggagggagtactatataa 222 |||||||||||||||||||| Sbjct: 5355 acggagggagtactatataa 5336
>gb|AC140720.21| Medicago truncatula clone mth2-17l10, complete sequence Length = 122940 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 201 ggacggagggagtactatat 220 |||||||||||||||||||| Sbjct: 78394 ggacggagggagtactatat 78413
>emb|AL391817.18| Human DNA sequence from clone RP11-91B9 on chromosome 1 Contains the PRELP gene for proline arginine-rich end leucine-rich repeat protein and the OPTC gene for opticin, complete sequence Length = 162436 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 167 ttctaaaacaaacatttcta 186 |||||||||||||||||||| Sbjct: 39928 ttctaaaacaaacatttcta 39909
>gb|AC134769.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OJ1145F05, from chromosome 3, complete sequence Length = 127348 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 194 tatttccggacggagggagtacta 217 |||||| ||||||||||||||||| Sbjct: 116696 tatttcgggacggagggagtacta 116719
>emb|AL021330.1|HS244F1 Human DNA sequence from clone RP1-244F1 on chromosome 6q16.1-16.3 Contains a nucleophosmin (nucleolar phosphoprotein B23, numatrin) (NPM1) (B23, NPM) pseudogene and a novel pseudogene, complete sequence Length = 84621 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 169 ctaaaacaaacatttctaga 188 |||||||||||||||||||| Sbjct: 75184 ctaaaacaaacatttctaga 75203
>gb|AY091373.1| Arabidopsis thaliana putative cytoplasmic ribosomal protein S15a (At3g46040) mRNA, complete cds Length = 424 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 248 ctcaacaacaatcttaccag 267 |||||||||||||||||||| Sbjct: 192 ctcaacaacaatcttaccag 173
>gb|AY045837.1| Arabidopsis thaliana putative cytoplasmic ribosomal protein S15a (At3g46040) mRNA, complete cds Length = 723 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 248 ctcaacaacaatcttaccag 267 |||||||||||||||||||| Sbjct: 285 ctcaacaacaatcttaccag 266
>gb|AY013754.1| Aegilops tauschii glutathione S-transferase gene, complete cds Length = 2453 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 118 gatgtatctagatttattttagtt 141 ||||||||||||| |||||||||| Sbjct: 2006 gatgtatctagatgtattttagtt 1983
>emb|BX957222.1| Methanococcus maripaludis S2 complete genome; segment 4/5 Length = 349607 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 catcctacgtattcgtctcc 54 |||||||||||||||||||| Sbjct: 133425 catcctacgtattcgtctcc 133406
>emb|BX640446.1| Bordetella bronchiseptica strain RB50, complete genome; segment 10/16 Length = 348642 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 344 cagcttgccttccttgagca 363 |||||||||||||||||||| Sbjct: 99712 cagcttgccttccttgagca 99731
>emb|BX640432.1| Bordetella parapertussis strain 12822, complete genome; segment 10/14 Length = 346301 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 344 cagcttgccttccttgagca 363 |||||||||||||||||||| Sbjct: 172731 cagcttgccttccttgagca 172750
>emb|BX640416.1| Bordetella pertussis strain Tohama I, complete genome; segment 6/12 Length = 349354 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 344 cagcttgccttccttgagca 363 |||||||||||||||||||| Sbjct: 60002 cagcttgccttccttgagca 59983
>gb|CP000142.2| Pelobacter carbinolicus DSM 2380, complete genome Length = 3665893 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 322 acctcgagtcgatcaccgtcctca 345 |||||||||||||||||| ||||| Sbjct: 3087978 acctcgagtcgatcaccgccctca 3088001
>emb|AL355775.1|ATF12M12 Arabidopsis thaliana DNA chromosome 3, BAC clone F12M12 Length = 106730 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 248 ctcaacaacaatcttaccag 267 |||||||||||||||||||| Sbjct: 365 ctcaacaacaatcttaccag 346
>emb|CR931735.1| Medicago truncatula chromosome 5 clone mth2-37f4, COMPLETE SEQUENCE Length = 114414 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 206 gagggagtactatataagca 225 |||||||||||||||||||| Sbjct: 5758 gagggagtactatataagca 5739
>emb|BX470140.10| Zebrafish DNA sequence from clone CH211-238E6 in linkage group 4 Contains the gene for a novel protein similar to vertebrate microphthalmia-associated transcription factor (MITF), six novel genes and two CpG islands, complete sequence Length = 148136 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 159 ttgtacatttctaaaacaaa 178 |||||||||||||||||||| Sbjct: 39327 ttgtacatttctaaaacaaa 39308
>gb|DQ374070.1| Beta vulgaris chromosome 9 clone BAC137 genomic sequence Length = 4617 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 201 ggacggagggagtactatat 220 |||||||||||||||||||| Sbjct: 775 ggacggagggagtactatat 756
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 350 gccttccttgagcagcccgaccaa 373 ||||| |||||||||||||||||| Sbjct: 1949065 gcctttcttgagcagcccgaccaa 1949042
>emb|BX511218.9| Zebrafish DNA sequence from clone DKEY-37K14 in linkage group 17, complete sequence Length = 152316 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 166 tttctaaaacaaacatttct 185 |||||||||||||||||||| Sbjct: 146940 tttctaaaacaaacatttct 146921
>gb|AC108210.4| Homo sapiens BAC clone RP11-457P14 from 4, complete sequence Length = 123377 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 98 aaatacttgtcctaaaaata 117 |||||||||||||||||||| Sbjct: 114240 aaatacttgtcctaaaaata 114221
>gb|AC119072.1| Oryza sativa ssp. japonica cv. Nipponbare OSJNBa0073N20 BAC genomic sequence, complete sequence Length = 147289 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 79 taatactccctctgttcataaata 102 ||||||||||||||||| |||||| Sbjct: 75055 taatactccctctgttcctaaata 75032
>gb|AC022029.7| Homo sapiens chromosome 10 clone RP11-93L14, complete sequence Length = 140040 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 166 tttctaaaacaaacatttct 185 |||||||||||||||||||| Sbjct: 45380 tttctaaaacaaacatttct 45399
>gb|AC149217.4| Mus musculus BAC clone RP24-147O12 from chromosome 7, complete sequence Length = 205466 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 339 gtcctcagcttgccttcctt 358 |||||||||||||||||||| Sbjct: 106454 gtcctcagcttgccttcctt 106435
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 203 acggagggagtactatataa 222 |||||||||||||||||||| Sbjct: 25790658 acggagggagtactatataa 25790639
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 201 ggacggagggagtactatat 220 |||||||||||||||||||| Sbjct: 1010730 ggacggagggagtactatat 1010749
>emb|BX822905.1|CNS0A61U Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB71ZE01 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 639 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 248 ctcaacaacaatcttaccag 267 |||||||||||||||||||| Sbjct: 241 ctcaacaacaatcttaccag 222
>emb|BX822473.1|CNS0A5UQ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB3ZF02 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 686 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 248 ctcaacaacaatcttaccag 267 |||||||||||||||||||| Sbjct: 271 ctcaacaacaatcttaccag 252
>emb|BX825952.1|CNS0A561 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL75ZF04 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 685 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 248 ctcaacaacaatcttaccag 267 |||||||||||||||||||| Sbjct: 255 ctcaacaacaatcttaccag 236
>emb|BX822971.1|CNS0A4PO Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB78ZA01 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 481 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 248 ctcaacaacaatcttaccag 267 |||||||||||||||||||| Sbjct: 122 ctcaacaacaatcttaccag 103
>emb|BX841733.1|CNS09YIV Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL54ZE09 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 635 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 248 ctcaacaacaatcttaccag 267 |||||||||||||||||||| Sbjct: 361 ctcaacaacaatcttaccag 380
>gb|AC090882.10| Oryza sativa chromosome 3 BAC OSJNBa0014G15 genomic sequence, complete sequence Length = 158839 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 201 ggacggagggagtactatataagc 224 |||||||||||||| ||||||||| Sbjct: 83781 ggacggagggagtattatataagc 83758
>gb|AF262043.1|T26D3 Arabidopsis thaliana BAC T26D3 Length = 81223 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 81 atactccctctgttcataaa 100 |||||||||||||||||||| Sbjct: 61606 atactccctctgttcataaa 61625
>dbj|AP003810.6| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1119_A04 Length = 128906 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 201 ggacggagggagtactatat 220 |||||||||||||||||||| Sbjct: 115077 ggacggagggagtactatat 115096
>dbj|AP005442.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0073I05 Length = 182291 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 201 ggacggagggagtactatat 220 |||||||||||||||||||| Sbjct: 32517 ggacggagggagtactatat 32498
>dbj|AP005250.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBb0009H02 Length = 155388 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 201 ggacggagggagtactatat 220 |||||||||||||||||||| Sbjct: 78092 ggacggagggagtactatat 78111
>dbj|AP003314.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0046B10 Length = 142596 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 201 ggacggagggagtactatat 220 |||||||||||||||||||| Sbjct: 43814 ggacggagggagtactatat 43795
>emb|BX004984.6| Zebrafish DNA sequence from clone DKEY-3N4, complete sequence Length = 264738 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 126 tagatttattttagttatgg 145 |||||||||||||||||||| Sbjct: 95121 tagatttattttagttatgg 95102
>dbj|AP005537.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0056L09 Length = 152910 Score = 40.1 bits (20), Expect = 5.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 75 tttgtaatactccctctgttcataaata 102 ||||| ||||||||||||||| |||||| Sbjct: 107789 tttgtcatactccctctgttcctaaata 107816
>dbj|AP003629.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0481H08 Length = 146841 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 203 acggagggagtactatataa 222 |||||||||||||||||||| Sbjct: 43054 acggagggagtactatataa 43073
>dbj|AP005686.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0016E03 Length = 152934 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 79 taatactccctctgttcataaata 102 |||||||||||| ||||||||||| Sbjct: 43710 taatactccctccgttcataaata 43733
>dbj|AP003992.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1077_E05 Length = 116305 Score = 40.1 bits (20), Expect = 5.3 Identities = 29/32 (90%) Strand = Plus / Minus Query: 189 acaagtatttccggacggagggagtactatat 220 |||||||||| | |||||||||||||||||| Sbjct: 11164 acaagtatttgggaacggagggagtactatat 11133
>dbj|AP005772.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0073A21 Length = 170051 Score = 40.1 bits (20), Expect = 5.3 Identities = 29/32 (90%) Strand = Plus / Minus Query: 189 acaagtatttccggacggagggagtactatat 220 |||||||||| | |||||||||||||||||| Sbjct: 147816 acaagtatttgggaacggagggagtactatat 147785
>dbj|AP005845.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0461D06 Length = 112895 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 201 ggacggagggagtactatat 220 |||||||||||||||||||| Sbjct: 27706 ggacggagggagtactatat 27725
>dbj|AP005114.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0689H05 Length = 135803 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 203 acggagggagtactatataagcat 226 |||||||||||||||||| ||||| Sbjct: 126960 acggagggagtactatattagcat 126937
>dbj|AP004589.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0556A11 Length = 138096 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 201 ggacggagggagtactatat 220 |||||||||||||||||||| Sbjct: 99552 ggacggagggagtactatat 99533
>emb|AJ234449.1|HVU234449 Hordeum vulgare partial mRNA; clone cMWG0768.rev Length = 261 Score = 40.1 bits (20), Expect = 5.3 Identities = 29/32 (90%) Strand = Plus / Plus Query: 318 gggaacctcgagtcgatcaccgtcctcagctt 349 |||||||||||||| | ||||||||| ||||| Sbjct: 190 gggaacctcgagtccaccaccgtcctgagctt 221
>dbj|AP004262.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0022B05 Length = 151317 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 201 ggacggagggagtactatat 220 |||||||||||||||||||| Sbjct: 8318 ggacggagggagtactatat 8337
>emb|CR962132.2| Medicago truncatula chromosome 5 clone mte1-33l16, COMPLETE SEQUENCE Length = 47783 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 206 gagggagtactatataagca 225 |||||||||||||||||||| Sbjct: 32190 gagggagtactatataagca 32171
>emb|CT573028.11| M.truncatula DNA sequence from clone MTH2-51N20 on chromosome 3, complete sequence Length = 116350 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 201 ggacggagggagtactatat 220 |||||||||||||||||||| Sbjct: 94388 ggacggagggagtactatat 94369
>dbj|AP002801.3| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-875G18, complete sequence Length = 218651 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 155 cattttgtacatttctaaaa 174 |||||||||||||||||||| Sbjct: 123962 cattttgtacatttctaaaa 123981
>emb|AL929457.12| Zebrafish DNA sequence from clone CH211-153I8 in linkage group 14, complete sequence Length = 164299 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 155 cattttgtacatttctaaaa 174 |||||||||||||||||||| Sbjct: 159580 cattttgtacatttctaaaa 159599
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 203 acggagggagtactatataa 222 |||||||||||||||||||| Sbjct: 25718834 acggagggagtactatataa 25718815
>emb|AL928780.5|CNS08CCA Oryza sativa chromosome 12, . BAC OSJNBa0018C20 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 137492 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 203 acggagggagtactatataa 222 |||||||||||||||||||| Sbjct: 12109 acggagggagtactatataa 12090
>emb|AL731881.4|CNS08C8L Oryza sativa chromosome 12, . BAC OSJNBa0002L05 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 167131 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 203 acggagggagtactatataa 222 |||||||||||||||||||| Sbjct: 157896 acggagggagtactatataa 157877
>emb|AL606448.3|OSJN00013 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0064H22, complete sequence Length = 147214 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 203 acggagggagtactatataa 222 |||||||||||||||||||| Sbjct: 48350 acggagggagtactatataa 48331
>emb|AL953891.10| Zebrafish DNA sequence from clone DKEY-28P22, complete sequence Length = 242282 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 126 tagatttattttagttatgg 145 |||||||||||||||||||| Sbjct: 25590 tagatttattttagttatgg 25571
>emb|BX510330.20| Zebrafish DNA sequence from clone DKEYP-82B3 in linkage group 13, complete sequence Length = 96887 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 155 cattttgtacatttctaaaa 174 |||||||||||||||||||| Sbjct: 60775 cattttgtacatttctaaaa 60794
>dbj|AP006423.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT23C14, TM0311, complete sequence Length = 82652 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 201 ggacggagggagtactatat 220 |||||||||||||||||||| Sbjct: 72736 ggacggagggagtactatat 72755
>dbj|AP006392.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT39E03, TM0266, complete sequence Length = 113459 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 79 taatactccctctgttcataaata 102 |||||||||||| ||||||||||| Sbjct: 23043 taatactccctccgttcataaata 23020
>emb|AL732321.18| Mouse DNA sequence from clone RP23-167N17 on chromosome X, complete sequence Length = 216244 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 164 catttctaaaacaaacattt 183 |||||||||||||||||||| Sbjct: 107723 catttctaaaacaaacattt 107704 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,030,877 Number of Sequences: 3902068 Number of extensions: 4030877 Number of successful extensions: 99277 Number of sequences better than 10.0: 176 Number of HSP's better than 10.0 without gapping: 197 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 93589 Number of HSP's gapped (non-prelim): 5685 length of query: 396 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 374 effective length of database: 17,147,199,772 effective search space: 6413052714728 effective search space used: 6413052714728 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
