Clone Name | rbart24d04 |
---|---|
Clone Library Name | barley_pub |
>emb|AJ575098.1|TAE575098 Triticum aestivum partial mRNA for IAA1 protein Length = 1104 Score = 831 bits (419), Expect = 0.0 Identities = 443/451 (98%) Strand = Plus / Minus Query: 41 acaagataccacaataataataatctcatagatgccctttacttaacaatcacacatact 100 ||||||||||| |||||||||| |||||| |||||||||||||||||||||||||||||| Sbjct: 1085 acaagataccataataataatagtctcattgatgccctttacttaacaatcacacatact 1026 Query: 101 taattgacaacagtagaataaaatcaccaagtagattctgggacacatggtagggaacat 160 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1025 taattgacaacagtagaataaaatcaccaagtagattctgggacacatggtagggaacat 966 Query: 161 cacataacaccaatccagctacacacagatagattattgcttctggtccaccaacaaatt 220 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 965 cacataacaccaatccagctacacacagatagattattgcttctggtccaccaacaaatt 906 Query: 221 aaacatggcaactctcccttcttttaatccagctaataattgaaaacattatatatctaa 280 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 905 aaacatggcaactctcccttcttttaatccagctaataattgaaaacattatatatctaa 846 Query: 281 gaaaccacagcacactgcaagaacaccatccttatggcatcatagtcttcctcttactgc 340 ||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 845 gaaaccatagcacactgcaagaacaccatccttgtggcatcatagtcttcctcttactgc 786 Query: 341 cccatgtttagctcttgttcttgtacttgtccttggcccttggtgcaagaccgatggctt 400 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 785 cccatctttagctcttgttcttgtacttgtccttggcccttggtgcaagaccgatggctt 726 Query: 401 cggaacccttcatgatcctcaagcgtttgcatgaagcaacaaacatctcccatgggacgt 460 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 725 cggaccccttcatgatcctcaagcgtttgcatgaagcaacaaacatctcccatgggacgt 666 Query: 461 ctccaacaagcatccagtcgccatccttgtc 491 ||||||||||||||||||| ||||||||||| Sbjct: 665 ctccaacaagcatccagtctccatccttgtc 635
>dbj|AK059838.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-206-C11, full insert sequence Length = 1180 Score = 450 bits (227), Expect = e-123 Identities = 399/453 (88%), Gaps = 5/453 (1%) Strand = Plus / Minus Query: 44 agataccacaataataataatctcatagatgccctttacttaacaatcacacatacttaa 103 |||||||| |||||||||| |||||| ||| |||||||||| ||||||||||| |||||| Sbjct: 1177 agataccataataataatagtctcattgataccctttacttcacaatcacacaaacttaa 1118 Query: 104 -ttgacaacagtagaataaaatcaccaagtagattctgggacacatggtagggaacatca 162 || |||||| | ||||||||||| ||||||||| ||||||||| ||||||| |||||| Sbjct: 1117 attaacaacattggaataaaatcatcaagtagatcttgggacacacggtaggggacatca 1058 Query: 163 cataacaccaatccagctacacacagatagattattgcttctggtccaccaacaaattaa 222 ||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||| Sbjct: 1057 cataacaccaatccagctacacacaaatagattattgcttctggtccataaacaaattaa 998 Query: 223 acatggcaactctcccttcttttaatccagctaataattgaaaacattatatatctaa-g 281 ||||| ||||||| |||||||||||||||||||| | ||||| |||||| ||||| | Sbjct: 997 acatgacaactcttccttcttttaatccagctaaacaagtaaaaccttatatttctaagg 938 Query: 282 aaaccacagcacactgcaagaacaccatccttatggcatcatagtcttcctct---tact 338 |||||| | ||||||||||||||||||| ||||||||| ||| || | ||| |||| Sbjct: 937 aaaccataacacactgcaagaacaccattcttatggcaccatgctcagcatcttaatact 878 Query: 339 gccccatgtttagctcttgttcttgtacttgtccttggcccttggtgcaagaccgatggc 398 || ||| || ||||||||||||||||||||||||| || |||||||||||||| ||||| Sbjct: 877 gcaacattttcagctcttgttcttgtacttgtcctttgctcttggtgcaagaccaatggc 818 Query: 399 ttcggaacccttcatgatcctcaagcgtttgcatgaagcaacaaacatctcccatgggac 458 |||||||||||||||||||||||||||||||||||| | |||||||||| ||| ||||| Sbjct: 817 ttcggaacccttcatgatcctcaagcgtttgcatgactcgacaaacatctgccacgggac 758 Query: 459 gtctccaacaagcatccagtcgccatccttgtc 491 |||||||||||||||||||| ||||||||||| Sbjct: 757 atctccaacaagcatccagtcaccatccttgtc 725
>dbj|AK062852.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-108-A04, full insert sequence Length = 430 Score = 412 bits (208), Expect = e-112 Identities = 374/426 (87%), Gaps = 5/426 (1%) Strand = Plus / Minus Query: 59 aataatctcatagatgccctttacttaacaatcacacatacttaa-ttgacaacagtaga 117 |||| |||||| ||| |||||||||| ||||||||||| |||||| || |||||| | || Sbjct: 430 aatagtctcattgataccctttacttcacaatcacacaaacttaaattaacaacattgga 371 Query: 118 ataaaatcaccaagtagattctgggacacatggtagggaacatcacataacaccaatcca 177 ||||||||| ||||||||| ||||||||| ||||||| ||||||||||||||||||||| Sbjct: 370 ataaaatcatcaagtagatcttgggacacacggtaggggacatcacataacaccaatcca 311 Query: 178 gctacacacagatagattattgcttctggtccaccaacaaattaaacatggcaactctcc 237 |||||||||| |||||||||||||||||||||| ||||||||||||||| ||||||| | Sbjct: 310 gctacacacaaatagattattgcttctggtccataaacaaattaaacatgacaactcttc 251 Query: 238 cttcttttaatccagctaataattgaaaacattatatatctaa-gaaaccacagcacact 296 ||||||||||||||||||| | ||||| |||||| ||||| ||||||| | |||||| Sbjct: 250 cttcttttaatccagctaaacaagtaaaaccttatatttctaaggaaaccataacacact 191 Query: 297 gcaagaacaccatccttatggcatcatagtcttcctct---tactgccccatgtttagct 353 ||||||||||||| ||||||||| ||| || | ||| |||||| ||| || |||| Sbjct: 190 gcaagaacaccattcttatggcaccatgctcagcatcttaatactgcaacattttcagct 131 Query: 354 cttgttcttgtacttgtccttggcccttggtgcaagaccgatggcttcggaacccttcat 413 ||||||||||||||||||||| || |||||||||||||| |||||||||||||||||||| Sbjct: 130 cttgttcttgtacttgtcctttgctcttggtgcaagaccaatggcttcggaacccttcat 71 Query: 414 gatcctcaagcgtttgcatgaagcaacaaacatctcccatgggacgtctccaacaagcat 473 ||||||||||||||||||||| | |||||||||| ||| ||||| |||||||||||||| Sbjct: 70 gatcctcaagcgtttgcatgactcgacaaacatctgccacgggacatctccaacaagcat 11 Query: 474 ccagtc 479 |||||| Sbjct: 10 ccagtc 5
>dbj|AK100790.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023121A20, full insert sequence Length = 1092 Score = 371 bits (187), Expect = 1e-99 Identities = 316/357 (88%), Gaps = 4/357 (1%) Strand = Plus / Minus Query: 139 tgggacacatggtagggaacatcacataacaccaatccagctacacacagatagattatt 198 ||||||||| ||||||| ||||||||||||||||||||||||||||||| |||||||||| Sbjct: 1086 tgggacacacggtaggggacatcacataacaccaatccagctacacacaaatagattatt 1027 Query: 199 gcttctggtccaccaacaaattaaacatggcaactctcccttcttttaatccagctaata 258 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 1026 gcttctggtccataaacaaattaaacatgacaactcttccttcttttaatccagctaaac 967 Query: 259 attgaaaacattatatatctaa-gaaaccacagcacactgcaagaacaccatccttatgg 317 | ||||| |||||| ||||| ||||||| | ||||||||||||||||||| ||||||| Sbjct: 966 aagtaaaaccttatatttctaaggaaaccataacacactgcaagaacaccattcttatgg 907 Query: 318 catcatagtcttcctct---tactgccccatgtttagctcttgttcttgtacttgtcctt 374 || ||| || | ||| |||||| ||| || ||||||||||||||||||||||||| Sbjct: 906 caccatgctcagcatcttaatactgcaacattttcagctcttgttcttgtacttgtcctt 847 Query: 375 ggcccttggtgcaagaccgatggcttcggaacccttcatgatcctcaagcgtttgcatga 434 || |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 846 tgctcttggtgcaagaccaatggcttcggaacccttcatgatcctcaagcgtttgcatga 787 Query: 435 agcaacaaacatctcccatgggacgtctccaacaagcatccagtcgccatccttgtc 491 | |||||||||| ||| ||||| |||||||||||||||||||| ||||||||||| Sbjct: 786 ctcgacaaacatctgccacgggacatctccaacaagcatccagtcaccatccttgtc 730
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 343 bits (173), Expect = 3e-91 Identities = 339/391 (86%), Gaps = 5/391 (1%) Strand = Plus / Plus Query: 1 acaaaaatagtgtgcttataattaacaaacaggttaactcacaagataccacaataataa 60 ||||||||| |||||| || ||||||||||| ||||||| || |||||||| |||||||| Sbjct: 30188202 acaaaaatattgtgctgatgattaacaaacatgttaacttaccagataccataataataa 30188261 Query: 61 taatctcatagatgccctttacttaacaatcacacatacttaa-ttgacaacagtagaat 119 || |||||| ||| |||||||||| ||||||||||| |||||| || |||||| | |||| Sbjct: 30188262 tagtctcattgataccctttacttcacaatcacacaaacttaaattaacaacattggaat 30188321 Query: 120 aaaatcaccaagtagattctgggacacatggtagggaacatcacataacaccaatccagc 179 ||||||| ||||||||| ||||||||| ||||||| ||||||||||||||||||||||| Sbjct: 30188322 aaaatcatcaagtagatcttgggacacacggtaggggacatcacataacaccaatccagc 30188381 Query: 180 tacacacagatagattattgcttctggtccaccaacaaattaaacatggcaactctccct 239 |||||||| |||||||||||||||||||||| ||||||||||||||| ||||||| ||| Sbjct: 30188382 tacacacaaatagattattgcttctggtccataaacaaattaaacatgacaactcttcct 30188441 Query: 240 tcttttaatccagctaataattgaaaacattatatatctaa-gaaaccacagcacactgc 298 ||||||||||||||||| | ||||| |||||| ||||| ||||||| | |||||||| Sbjct: 30188442 tcttttaatccagctaaacaagtaaaaccttatatttctaaggaaaccataacacactgc 30188501 Query: 299 aagaacaccatccttatggcatcatagtcttcctct---tactgccccatgtttagctct 355 ||||||||||| ||||||||| ||| || | ||| |||||| ||| || |||||| Sbjct: 30188502 aagaacaccattcttatggcaccatgctcagcatcttaatactgcaacattttcagctct 30188561 Query: 356 tgttcttgtacttgtccttggcccttggtgc 386 ||||||||||||||||||| || |||||||| Sbjct: 30188562 tgttcttgtacttgtcctttgctcttggtgc 30188592 Score = 91.7 bits (46), Expect = 2e-15 Identities = 58/62 (93%) Strand = Plus / Plus Query: 386 caagaccgatggcttcggaacccttcatgatcctcaagcgtttgcatgaagcaacaaaca 445 ||||||| ||||||||||||||||||||||||||||||||||||||||| | ||||||| Sbjct: 30188676 caagaccaatggcttcggaacccttcatgatcctcaagcgtttgcatgactcgacaaaca 30188735 Query: 446 tc 447 || Sbjct: 30188736 tc 30188737 Score = 60.0 bits (30), Expect = 7e-06 Identities = 36/38 (94%) Strand = Plus / Plus Query: 454 gggacgtctccaacaagcatccagtcgccatccttgtc 491 ||||| |||||||||||||||||||| ||||||||||| Sbjct: 30188868 gggacatctccaacaagcatccagtcaccatccttgtc 30188905 Score = 50.1 bits (25), Expect = 0.007 Identities = 40/45 (88%) Strand = Plus / Plus Query: 447 ctcccatgggacgtctccaacaagcatccagtcgccatccttgtc 491 |||||| |||||||| || || |||||||||||||| |||||||| Sbjct: 24085715 ctcccacgggacgtcgccgacgagcatccagtcgccgtccttgtc 24085759
>gb|AC096855.5| Oryza sativa chromosome 3 BAC OJ1365_D05 genomic sequence, complete sequence Length = 163972 Score = 343 bits (173), Expect = 3e-91 Identities = 339/391 (86%), Gaps = 5/391 (1%) Strand = Plus / Minus Query: 1 acaaaaatagtgtgcttataattaacaaacaggttaactcacaagataccacaataataa 60 ||||||||| |||||| || ||||||||||| ||||||| || |||||||| |||||||| Sbjct: 35693 acaaaaatattgtgctgatgattaacaaacatgttaacttaccagataccataataataa 35634 Query: 61 taatctcatagatgccctttacttaacaatcacacatacttaa-ttgacaacagtagaat 119 || |||||| ||| |||||||||| ||||||||||| |||||| || |||||| | |||| Sbjct: 35633 tagtctcattgataccctttacttcacaatcacacaaacttaaattaacaacattggaat 35574 Query: 120 aaaatcaccaagtagattctgggacacatggtagggaacatcacataacaccaatccagc 179 ||||||| ||||||||| ||||||||| ||||||| ||||||||||||||||||||||| Sbjct: 35573 aaaatcatcaagtagatcttgggacacacggtaggggacatcacataacaccaatccagc 35514 Query: 180 tacacacagatagattattgcttctggtccaccaacaaattaaacatggcaactctccct 239 |||||||| |||||||||||||||||||||| ||||||||||||||| ||||||| ||| Sbjct: 35513 tacacacaaatagattattgcttctggtccataaacaaattaaacatgacaactcttcct 35454 Query: 240 tcttttaatccagctaataattgaaaacattatatatctaa-gaaaccacagcacactgc 298 ||||||||||||||||| | ||||| |||||| ||||| ||||||| | |||||||| Sbjct: 35453 tcttttaatccagctaaacaagtaaaaccttatatttctaaggaaaccataacacactgc 35394 Query: 299 aagaacaccatccttatggcatcatagtcttcctct---tactgccccatgtttagctct 355 ||||||||||| ||||||||| ||| || | ||| |||||| ||| || |||||| Sbjct: 35393 aagaacaccattcttatggcaccatgctcagcatcttaatactgcaacattttcagctct 35334 Query: 356 tgttcttgtacttgtccttggcccttggtgc 386 ||||||||||||||||||| || |||||||| Sbjct: 35333 tgttcttgtacttgtcctttgctcttggtgc 35303 Score = 91.7 bits (46), Expect = 2e-15 Identities = 58/62 (93%) Strand = Plus / Minus Query: 386 caagaccgatggcttcggaacccttcatgatcctcaagcgtttgcatgaagcaacaaaca 445 ||||||| ||||||||||||||||||||||||||||||||||||||||| | ||||||| Sbjct: 35219 caagaccaatggcttcggaacccttcatgatcctcaagcgtttgcatgactcgacaaaca 35160 Query: 446 tc 447 || Sbjct: 35159 tc 35158 Score = 60.0 bits (30), Expect = 7e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 454 gggacgtctccaacaagcatccagtcgccatccttgtc 491 ||||| |||||||||||||||||||| ||||||||||| Sbjct: 35027 gggacatctccaacaagcatccagtcaccatccttgtc 34990
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 343 bits (173), Expect = 3e-91 Identities = 339/391 (86%), Gaps = 5/391 (1%) Strand = Plus / Plus Query: 1 acaaaaatagtgtgcttataattaacaaacaggttaactcacaagataccacaataataa 60 ||||||||| |||||| || ||||||||||| ||||||| || |||||||| |||||||| Sbjct: 30279624 acaaaaatattgtgctgatgattaacaaacatgttaacttaccagataccataataataa 30279683 Query: 61 taatctcatagatgccctttacttaacaatcacacatacttaa-ttgacaacagtagaat 119 || |||||| ||| |||||||||| ||||||||||| |||||| || |||||| | |||| Sbjct: 30279684 tagtctcattgataccctttacttcacaatcacacaaacttaaattaacaacattggaat 30279743 Query: 120 aaaatcaccaagtagattctgggacacatggtagggaacatcacataacaccaatccagc 179 ||||||| ||||||||| ||||||||| ||||||| ||||||||||||||||||||||| Sbjct: 30279744 aaaatcatcaagtagatcttgggacacacggtaggggacatcacataacaccaatccagc 30279803 Query: 180 tacacacagatagattattgcttctggtccaccaacaaattaaacatggcaactctccct 239 |||||||| |||||||||||||||||||||| ||||||||||||||| ||||||| ||| Sbjct: 30279804 tacacacaaatagattattgcttctggtccataaacaaattaaacatgacaactcttcct 30279863 Query: 240 tcttttaatccagctaataattgaaaacattatatatctaa-gaaaccacagcacactgc 298 ||||||||||||||||| | ||||| |||||| ||||| ||||||| | |||||||| Sbjct: 30279864 tcttttaatccagctaaacaagtaaaaccttatatttctaaggaaaccataacacactgc 30279923 Query: 299 aagaacaccatccttatggcatcatagtcttcctct---tactgccccatgtttagctct 355 ||||||||||| ||||||||| ||| || | ||| |||||| ||| || |||||| Sbjct: 30279924 aagaacaccattcttatggcaccatgctcagcatcttaatactgcaacattttcagctct 30279983 Query: 356 tgttcttgtacttgtccttggcccttggtgc 386 ||||||||||||||||||| || |||||||| Sbjct: 30279984 tgttcttgtacttgtcctttgctcttggtgc 30280014 Score = 91.7 bits (46), Expect = 2e-15 Identities = 58/62 (93%) Strand = Plus / Plus Query: 386 caagaccgatggcttcggaacccttcatgatcctcaagcgtttgcatgaagcaacaaaca 445 ||||||| ||||||||||||||||||||||||||||||||||||||||| | ||||||| Sbjct: 30280098 caagaccaatggcttcggaacccttcatgatcctcaagcgtttgcatgactcgacaaaca 30280157 Query: 446 tc 447 || Sbjct: 30280158 tc 30280159 Score = 60.0 bits (30), Expect = 7e-06 Identities = 36/38 (94%) Strand = Plus / Plus Query: 454 gggacgtctccaacaagcatccagtcgccatccttgtc 491 ||||| |||||||||||||||||||| ||||||||||| Sbjct: 30280290 gggacatctccaacaagcatccagtcaccatccttgtc 30280327 Score = 50.1 bits (25), Expect = 0.007 Identities = 40/45 (88%) Strand = Plus / Plus Query: 447 ctcccatgggacgtctccaacaagcatccagtcgccatccttgtc 491 |||||| |||||||| || || |||||||||||||| |||||||| Sbjct: 24003184 ctcccacgggacgtcgccgacgagcatccagtcgccgtccttgtc 24003228
>emb|AJ251791.1|OSA251791 Oryza sativa partial mRNA for putative IAA1 protein (iaa1 gene) Length = 1068 Score = 311 bits (157), Expect = 1e-81 Identities = 289/331 (87%), Gaps = 4/331 (1%) Strand = Plus / Minus Query: 165 taacaccaatccagctacacacagatagattattgcttctggtccaccaacaaattaaac 224 ||||||||||||||||||||||| || ||||||||||||||||||| |||||||||||| Sbjct: 1050 taacaccaatccagctacacacaaatggattattgcttctggtccataaacaaattaaac 991 Query: 225 atggcaactctcccttcttttaatccagctaataattgaaaacattatatatctaag-aa 283 ||| ||||||| ||||| |||||||||||||| | ||||| |||||| |||||| || Sbjct: 990 atgacaactcttccttcctttaatccagctaaacaagtaaaaccttatatttctaaggaa 931 Query: 284 accacagcacactgcaagaacaccatccttatggcatcatagtcttcctctta---ctgc 340 |||| | ||||||||||||||||||| |||||||| ||| || | ||||| |||| Sbjct: 930 accataacacactgcaagaacaccatttttatggcaccatgctcagcatcttaatactgc 871 Query: 341 cccatgtttagctcttgttcttgtacttgtccttggcccttggtgcaagaccgatggctt 400 ||| || ||||||||||||||||||||||||| || |||||||||||||| ||||||| Sbjct: 870 aacattttcagctcttgttcttgtacttgtcctttgctcttggtgcaagaccaatggctt 811 Query: 401 cggaacccttcatgatcctcaagcgtttgcatgaagcaacaaacatctcccatgggacgt 460 |||||||||||||||||||||||||||||||||| | |||||||||| ||| ||||| | Sbjct: 810 cggaacccttcatgatcctcaagcgtttgcatgactcgacaaacatctgccacgggacat 751 Query: 461 ctccaacaagcatccagtcgccatccttgtc 491 ||||||||||||||||||| ||||||||||| Sbjct: 750 ctccaacaagcatccagtcaccatccttgtc 720
>ref|XM_469685.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1379 Score = 297 bits (150), Expect = 2e-77 Identities = 298/344 (86%), Gaps = 5/344 (1%) Strand = Plus / Minus Query: 48 accacaataataataatctcatagatgccctttacttaacaatcacacatacttaa-ttg 106 |||| |||||||||| |||||| ||| |||||||||| ||||||||||| |||||| || Sbjct: 1379 accataataataatagtctcattgataccctttacttcacaatcacacaaacttaaatta 1320 Query: 107 acaacagtagaataaaatcaccaagtagattctgggacacatggtagggaacatcacata 166 |||||| | ||||||||||| ||||||||| ||||||||| ||||||| |||||||||| Sbjct: 1319 acaacattggaataaaatcatcaagtagatcttgggacacacggtaggggacatcacata 1260 Query: 167 acaccaatccagctacacacagatagattattgcttctggtccaccaacaaattaaacat 226 ||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||| Sbjct: 1259 acaccaatccagctacacacaaatagattattgcttctggtccataaacaaattaaacat 1200 Query: 227 ggcaactctcccttcttttaatccagctaataattgaaaacattatatatctaa-gaaac 285 | ||||||| |||||||||||||||||||| | ||||| |||||| ||||| ||||| Sbjct: 1199 gacaactcttccttcttttaatccagctaaacaagtaaaaccttatatttctaaggaaac 1140 Query: 286 cacagcacactgcaagaacaccatccttatggcatcatagtcttcctct---tactgccc 342 || | ||||||||||||||||||| ||||||||| ||| || | ||| |||||| Sbjct: 1139 cataacacactgcaagaacaccattcttatggcaccatgctcagcatcttaatactgcaa 1080 Query: 343 catgtttagctcttgttcttgtacttgtccttggcccttggtgc 386 ||| || ||||||||||||||||||||||||| || |||||||| Sbjct: 1079 cattttcagctcttgttcttgtacttgtcctttgctcttggtgc 1036 Score = 91.7 bits (46), Expect = 2e-15 Identities = 58/62 (93%) Strand = Plus / Minus Query: 386 caagaccgatggcttcggaacccttcatgatcctcaagcgtttgcatgaagcaacaaaca 445 ||||||| ||||||||||||||||||||||||||||||||||||||||| | ||||||| Sbjct: 952 caagaccaatggcttcggaacccttcatgatcctcaagcgtttgcatgactcgacaaaca 893 Query: 446 tc 447 || Sbjct: 892 tc 891 Score = 60.0 bits (30), Expect = 7e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 454 gggacgtctccaacaagcatccagtcgccatccttgtc 491 ||||| |||||||||||||||||||| ||||||||||| Sbjct: 760 gggacatctccaacaagcatccagtcaccatccttgtc 723
>ref|XM_469684.1| Oryza sativa (japonica cultivar-group), mRNA Length = 811 Score = 202 bits (102), Expect = 8e-49 Identities = 132/142 (92%) Strand = Plus / Minus Query: 350 agctcttgttcttgtacttgtccttggcccttggtgcaagaccgatggcttcggaaccct 409 ||||||||||||||||||||||||| || |||||||||||||| |||||||||||||||| Sbjct: 809 agctcttgttcttgtacttgtcctttgctcttggtgcaagaccaatggcttcggaaccct 750 Query: 410 tcatgatcctcaagcgtttgcatgaagcaacaaacatctcccatgggacgtctccaacaa 469 ||||||||||||||||||||||||| | |||||||||| ||| ||||| |||||||||| Sbjct: 749 tcatgatcctcaagcgtttgcatgactcgacaaacatctgccacgggacatctccaacaa 690 Query: 470 gcatccagtcgccatccttgtc 491 |||||||||| ||||||||||| Sbjct: 689 gcatccagtcaccatccttgtc 668
>emb|AJ563599.2|OSA563599 Oryza sativa (indica cultivar-group) iaa1 gene for Aux/IAA protein, exons 1-5 Length = 4539 Score = 202 bits (102), Expect = 8e-49 Identities = 216/252 (85%), Gaps = 4/252 (1%) Strand = Plus / Minus Query: 139 tgggacacatggtagggaacatcacataacaccaatccagctacacacagatagattatt 198 ||||||||| ||||||| ||||||||||||||||||||||||||||||| || ||||||| Sbjct: 4479 tgggacacacggtaggggacatcacataacaccaatccagctacacacaaatggattatt 4420 Query: 199 gcttctggtccaccaacaaattaaacatggcaactctcccttcttttaatccagctaata 258 |||||||||||| ||||||||||||||| ||||||| ||||| |||||||||||||| Sbjct: 4419 gcttctggtccataaacaaattaaacatgacaactcttccttcctttaatccagctaaac 4360 Query: 259 attgaaaacattatatatctaa-gaaaccacagcacactgcaagaacaccatccttatgg 317 | ||||| |||||| ||||| ||||||| | ||||||||||||||||||| |||||| Sbjct: 4359 aagtaaaaccttatatttctaaggaaaccataacacactgcaagaacaccatttttatgg 4300 Query: 318 catcatagtcttcctct---tactgccccatgtttagctcttgttcttgtacttgtcctt 374 || ||| || | ||| |||||| ||| || ||||||||||||||||||||||||| Sbjct: 4299 caccatgctcagcatcttaatactgcaacattttcagctcttgttcttgtacttgtcctt 4240 Query: 375 ggcccttggtgc 386 || |||||||| Sbjct: 4239 tgctcttggtgc 4228 Score = 91.7 bits (46), Expect = 2e-15 Identities = 58/62 (93%) Strand = Plus / Minus Query: 386 caagaccgatggcttcggaacccttcatgatcctcaagcgtttgcatgaagcaacaaaca 445 ||||||| ||||||||||||||||||||||||||||||||||||||||| | ||||||| Sbjct: 4144 caagaccaatggcttcggaacccttcatgatcctcaagcgtttgcatgactcgacaaaca 4085 Query: 446 tc 447 || Sbjct: 4084 tc 4083 Score = 60.0 bits (30), Expect = 7e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 454 gggacgtctccaacaagcatccagtcgccatccttgtc 491 ||||| |||||||||||||||||||| ||||||||||| Sbjct: 3952 gggacatctccaacaagcatccagtcaccatccttgtc 3915
>gb|AF123508.1|AF123508 Nicotiana tabacum Nt-iaa28 deduced protein mRNA, complete cds Length = 943 Score = 105 bits (53), Expect = 1e-19 Identities = 98/113 (86%) Strand = Plus / Minus Query: 379 cttggtgcaagaccgatggcttcggaacccttcatgatcctcaagcgtttgcatgaagca 438 |||||||| || || ||||| || || || ||||| ||||| ||||||||||||||| || Sbjct: 752 cttggtgctagtccaatggcctcagatcctttcattatccttaagcgtttgcatgaatca 693 Query: 439 acaaacatctcccatgggacgtctccaacaagcatccagtcgccatccttgtc 491 |||||||||||||| || || || ||||||||||||||||| ||||||||||| Sbjct: 692 acaaacatctcccaaggtacatcaccaacaagcatccagtctccatccttgtc 640
>ref|NM_111345.2| Arabidopsis thaliana IAA16; transcription factor AT3G04730 (IAA16) mRNA, complete cds Length = 1279 Score = 99.6 bits (50), Expect = 8e-18 Identities = 95/110 (86%) Strand = Plus / Minus Query: 376 gcccttggtgcaagaccgatggcttcggaacccttcatgatcctcaagcgtttgcatgaa 435 |||||||| ||||| ||||| ||||| || |||||||| || | | |||||||||||| Sbjct: 870 gcccttggagcaagtccgattgcttctgatcccttcattattcgtatacgtttgcatgaa 811 Query: 436 gcaacaaacatctcccatgggacgtctccaacaagcatccagtcgccatc 485 |||||||||||||||| || |||||||| |||||||||||||||||||| Sbjct: 810 tcaacaaacatctcccacggtacgtctcctacaagcatccagtcgccatc 761
>gb|BT000857.1| Arabidopsis thaliana At3g04730/F7O18_22 mRNA, complete cds Length = 711 Score = 99.6 bits (50), Expect = 8e-18 Identities = 95/110 (86%) Strand = Plus / Minus Query: 376 gcccttggtgcaagaccgatggcttcggaacccttcatgatcctcaagcgtttgcatgaa 435 |||||||| ||||| ||||| ||||| || |||||||| || | | |||||||||||| Sbjct: 683 gcccttggagcaagtccgattgcttctgatcccttcattattcgtatacgtttgcatgaa 624 Query: 436 gcaacaaacatctcccatgggacgtctccaacaagcatccagtcgccatc 485 |||||||||||||||| || |||||||| |||||||||||||||||||| Sbjct: 623 tcaacaaacatctcccacggtacgtctcctacaagcatccagtcgccatc 574
>gb|AF375420.1| Arabidopsis thaliana AT3g04730/F7O18_22 mRNA, complete cds Length = 1261 Score = 99.6 bits (50), Expect = 8e-18 Identities = 95/110 (86%) Strand = Plus / Minus Query: 376 gcccttggtgcaagaccgatggcttcggaacccttcatgatcctcaagcgtttgcatgaa 435 |||||||| ||||| ||||| ||||| || |||||||| || | | |||||||||||| Sbjct: 866 gcccttggagcaagtccgattgcttctgatcccttcattattcgtatacgtttgcatgaa 807 Query: 436 gcaacaaacatctcccatgggacgtctccaacaagcatccagtcgccatc 485 |||||||||||||||| || |||||||| |||||||||||||||||||| Sbjct: 806 tcaacaaacatctcccacggtacgtctcctacaagcatccagtcgccatc 757
>dbj|AK221957.1| Arabidopsis thaliana mRNA for auxin-induced protein, complete cds, clone: RAFL22-51-M14 Length = 519 Score = 99.6 bits (50), Expect = 8e-18 Identities = 95/110 (86%) Strand = Plus / Minus Query: 376 gcccttggtgcaagaccgatggcttcggaacccttcatgatcctcaagcgtttgcatgaa 435 |||||||| ||||| ||||| ||||| || |||||||| || | | |||||||||||| Sbjct: 223 gcccttggagcaagtccgattgcttctgatcccttcattattcgtatacgtttgcatgaa 164 Query: 436 gcaacaaacatctcccatgggacgtctccaacaagcatccagtcgccatc 485 |||||||||||||||| || |||||||| |||||||||||||||||||| Sbjct: 163 tcaacaaacatctcccacggtacgtctcctacaagcatccagtcgccatc 114
>gb|AF332400.1| Arabidopsis thaliana clone C00021 (e) auxin-induced protein IAA16 (At3g04730) mRNA, complete cds Length = 711 Score = 99.6 bits (50), Expect = 8e-18 Identities = 95/110 (86%) Strand = Plus / Minus Query: 376 gcccttggtgcaagaccgatggcttcggaacccttcatgatcctcaagcgtttgcatgaa 435 |||||||| ||||| ||||| ||||| || |||||||| || | | |||||||||||| Sbjct: 683 gcccttggagcaagtccgattgcttctgatcccttcattattcgtatacgtttgcatgaa 624 Query: 436 gcaacaaacatctcccatgggacgtctccaacaagcatccagtcgccatc 485 |||||||||||||||| || |||||||| |||||||||||||||||||| Sbjct: 623 tcaacaaacatctcccacggtacgtctcctacaagcatccagtcgccatc 574
>emb|BX823949.1|CNS0A6JG Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS9ZF01 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1096 Score = 99.6 bits (50), Expect = 8e-18 Identities = 95/110 (86%) Strand = Plus / Minus Query: 376 gcccttggtgcaagaccgatggcttcggaacccttcatgatcctcaagcgtttgcatgaa 435 |||||||| ||||| ||||| ||||| || |||||||| || | | |||||||||||| Sbjct: 825 gcccttggagcaagtccgattgcttctgatcccttcattattcgtatacgtttgcatgaa 766 Query: 436 gcaacaaacatctcccatgggacgtctccaacaagcatccagtcgccatc 485 |||||||||||||||| || |||||||| |||||||||||||||||||| Sbjct: 765 tcaacaaacatctcccacggtacgtctcctacaagcatccagtcgccatc 716
>emb|BX824584.1|CNS0A4VR Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH58ZC08 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1234 Score = 99.6 bits (50), Expect = 8e-18 Identities = 95/110 (86%) Strand = Plus / Minus Query: 376 gcccttggtgcaagaccgatggcttcggaacccttcatgatcctcaagcgtttgcatgaa 435 |||||||| ||||| ||||| ||||| || |||||||| || | | |||||||||||| Sbjct: 854 gcccttggagcaagtccgattgcttctgatcccttcattattcgtatacgtttgcatgaa 795 Query: 436 gcaacaaacatctcccatgggacgtctccaacaagcatccagtcgccatc 485 |||||||||||||||| || |||||||| |||||||||||||||||||| Sbjct: 794 tcaacaaacatctcccacggtacgtctcctacaagcatccagtcgccatc 745
>gb|AY087195.1| Arabidopsis thaliana clone 32727 mRNA, complete sequence Length = 1140 Score = 99.6 bits (50), Expect = 8e-18 Identities = 95/110 (86%) Strand = Plus / Minus Query: 376 gcccttggtgcaagaccgatggcttcggaacccttcatgatcctcaagcgtttgcatgaa 435 |||||||| ||||| ||||| ||||| || |||||||| || | | |||||||||||| Sbjct: 870 gcccttggagcaagtccgattgcttctgatcccttcattattcgtatacgtttgcatgaa 811 Query: 436 gcaacaaacatctcccatgggacgtctccaacaagcatccagtcgccatc 485 |||||||||||||||| || |||||||| |||||||||||||||||||| Sbjct: 810 tcaacaaacatctcccacggtacgtctcctacaagcatccagtcgccatc 761
>gb|U49072.1|ATU49072 Arabidopsis thaliana early auxin-induced (IAA16) mRNA, complete cds Length = 1169 Score = 99.6 bits (50), Expect = 8e-18 Identities = 95/110 (86%) Strand = Plus / Minus Query: 376 gcccttggtgcaagaccgatggcttcggaacccttcatgatcctcaagcgtttgcatgaa 435 |||||||| ||||| ||||| ||||| || |||||||| || | | |||||||||||| Sbjct: 849 gcccttggagcaagtccgattgcttctgatcccttcattattcgtatacgtttgcatgaa 790 Query: 436 gcaacaaacatctcccatgggacgtctccaacaagcatccagtcgccatc 485 |||||||||||||||| || |||||||| |||||||||||||||||||| Sbjct: 789 tcaacaaacatctcccacggtacgtctcctacaagcatccagtcgccatc 740
>dbj|AK068213.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013149K13, full insert sequence Length = 1545 Score = 95.6 bits (48), Expect = 1e-16 Identities = 99/116 (85%) Strand = Plus / Minus Query: 376 gcccttggtgcaagaccgatggcttcggaacccttcatgatcctcaagcgtttgcatgaa 435 ||||| |||||||| || || ||||| || || ||||| ||||| | ||| |||||||| Sbjct: 1058 gccctcggtgcaaggccaatagcttctgatcctttcattatcctaaggcgcttgcatgat 999 Query: 436 gcaacaaacatctcccatgggacgtctccaacaagcatccagtcgccatccttgtc 491 ||||||||||||||||||||||||| || || |||||||||||||| |||||||| Sbjct: 998 tcaacaaacatctcccatgggacgtcgccgacgagcatccagtcgccgtccttgtc 943
>emb|AJ843999.1| Plantago major mRNA for auxin resistance protein (axr2 gene) Length = 1195 Score = 93.7 bits (47), Expect = 5e-16 Identities = 98/115 (85%) Strand = Plus / Minus Query: 374 tggcccttggtgcaagaccgatggcttcggaacccttcatgatcctcaagcgtttgcatg 433 ||||||| |||||||| || ||||| || | || ||||| || | || ||| ||||||| Sbjct: 811 tggccctgggtgcaagtccaatggcctcagttcctttcattatgcgcaggcgcttgcatg 752 Query: 434 aagcaacaaacatctcccatgggacgtctccaacaagcatccagtcgccatcctt 488 | ||||||||||||||||||||||||| ||||||||||||||||| |||||||| Sbjct: 751 atccaacaaacatctcccatgggacgtcaccaacaagcatccagtcaccatcctt 697
>gb|AF373100.1| Populus tremula x Populus tremuloides auxin-regulated protein (IAA1) mRNA, complete cds Length = 1313 Score = 93.7 bits (47), Expect = 5e-16 Identities = 74/83 (89%) Strand = Plus / Minus Query: 409 ttcatgatcctcaagcgtttgcatgaagcaacaaacatctcccatgggacgtctccaaca 468 ||||||||||||||||| ||||||||| |||||||||| ||||||| || ||||| ||| Sbjct: 821 ttcatgatcctcaagcgcttgcatgaatcaacaaacattccccatggaacatctcctaca 762 Query: 469 agcatccagtcgccatccttgtc 491 |||||||| || ||||||||||| Sbjct: 761 agcatccaatctccatccttgtc 739
>gb|AF123509.1|AF123509 Nicotiana tabacum Nt-iaa4.1 deduced protein mRNA, complete cds Length = 884 Score = 93.7 bits (47), Expect = 5e-16 Identities = 74/83 (89%) Strand = Plus / Minus Query: 409 ttcatgatcctcaagcgtttgcatgaagcaacaaacatctcccatgggacgtctccaaca 468 ||||| ||||| ||||||||||||||| |||||||||||||||| || || || |||||| Sbjct: 680 ttcattatccttaagcgtttgcatgaatcaacaaacatctcccaaggtacatcaccaaca 621 Query: 469 agcatccagtcgccatccttgtc 491 ||||||||||| ||||| ||||| Sbjct: 620 agcatccagtctccatctttgtc 598
>gb|AY137964.1| Mirabilis jalapa clone MSR-193 Aux/IAA4 mRNA, partial cds Length = 157 Score = 85.7 bits (43), Expect = 1e-13 Identities = 73/83 (87%) Strand = Plus / Minus Query: 409 ttcatgatcctcaagcgtttgcatgaagcaacaaacatctcccatgggacgtctccaaca 468 ||||||||| |||| | ||||| ||| ||| ||||||||||| ||||| ||||||||| Sbjct: 101 ttcatgatcttcaacctcttgcaagaatcaatgaacatctcccaggggacatctccaaca 42 Query: 469 agcatccagtcgccatccttgtc 491 ||||||||||||||||||||||| Sbjct: 41 agcatccagtcgccatccttgtc 19
>gb|DQ191055.1| Glycine max clone DD7.2 SP-5 mRNA, complete cds Length = 478 Score = 81.8 bits (41), Expect = 2e-12 Identities = 59/65 (90%) Strand = Plus / Minus Query: 427 ttgcatgaagcaacaaacatctcccatgggacgtctccaacaagcatccagtcgccatcc 486 |||||||| |||||||||||||||||||||| || || |||||||||||||| |||||| Sbjct: 308 ttgcatgattcaacaaacatctcccatgggacatcaccgacaagcatccagtcaccatcc 249 Query: 487 ttgtc 491 ||||| Sbjct: 248 ttgtc 244
>emb|AJ306829.1|PTR306829 Populus tremula x Populus tremuloides mRNA for aux/IAA protein (IAA6 gene) Length = 1206 Score = 81.8 bits (41), Expect = 2e-12 Identities = 59/65 (90%) Strand = Plus / Minus Query: 427 ttgcatgaagcaacaaacatctcccatgggacgtctccaacaagcatccagtcgccatcc 486 ||||||||| ||||||||||||||||||| || || || ||||||||||| ||||||||| Sbjct: 959 ttgcatgaatcaacaaacatctcccatggaacatcacccacaagcatccaatcgccatcc 900 Query: 487 ttgtc 491 ||||| Sbjct: 899 ttgtc 895
>gb|J03919.1|SOYAUX28 Soybean auxin-regulated protein (Aux28) mRNA, complete cds Length = 1784 Score = 81.8 bits (41), Expect = 2e-12 Identities = 59/65 (90%) Strand = Plus / Minus Query: 427 ttgcatgaagcaacaaacatctcccatgggacgtctccaacaagcatccagtcgccatcc 486 |||||||| |||||||||||||||||||||| || || |||||||||||||| |||||| Sbjct: 1158 ttgcatgattcaacaaacatctcccatgggacatcaccgacaagcatccagtcaccatcc 1099 Query: 487 ttgtc 491 ||||| Sbjct: 1098 ttgtc 1094
>ref|XM_468970.1| Oryza sativa (japonica cultivar-group), mRNA Length = 707 Score = 79.8 bits (40), Expect = 8e-12 Identities = 97/116 (83%) Strand = Plus / Minus Query: 376 gcccttggtgcaagaccgatggcttcggaacccttcatgatcctcaagcgtttgcatgaa 435 |||||||||||||| || |||||||| || || |||||||| | | ||||||||| || Sbjct: 685 gcccttggtgcaaggccaatggcttcagaccctttcatgattcggaggcgtttgcacgac 626 Query: 436 gcaacaaacatctcccatgggacgtctccaacaagcatccagtcgccatccttgtc 491 | || ||||||||||| |||||||| || || |||||||||||||| |||||||| Sbjct: 625 tcgacgaacatctcccacgggacgtcgccgacgagcatccagtcgccgtccttgtc 570
>gb|DQ442403.1| Striga asiatica clone StIAA-1 auxin-regulated protein mRNA, complete cds Length = 1228 Score = 75.8 bits (38), Expect = 1e-10 Identities = 56/62 (90%) Strand = Plus / Minus Query: 427 ttgcatgaagcaacaaacatctcccatgggacgtctccaacaagcatccagtcgccatcc 486 ||||||||||||| |||||||||||| || || || ||||||||||||||||| |||||| Sbjct: 839 ttgcatgaagcaataaacatctcccaaggaacatccccaacaagcatccagtctccatcc 780 Query: 487 tt 488 || Sbjct: 779 tt 778
>gb|BT013567.1| Lycopersicon esculentum clone 132305F, mRNA sequence Length = 1626 Score = 73.8 bits (37), Expect = 5e-10 Identities = 94/113 (83%) Strand = Plus / Minus Query: 376 gcccttggtgcaagaccgatggcttcggaacccttcatgatcctcaagcgtttgcatgaa 435 |||||||| || || || ||||| || ||||| |||||||||||||| | |||||| | | Sbjct: 1257 gcccttggggccaggccaatggcatctgaacctttcatgatcctcaaccttttgcaagta 1198 Query: 436 gcaacaaacatctcccatgggacgtctccaacaagcatccagtcgccatcctt 488 | | |||||||||||| ||||| || || |||||||||||||| |||||||| Sbjct: 1197 tcgataaacatctcccaggggacatcaccgacaagcatccagtccccatcctt 1145
>emb|AJ937282.1| Lycopersicon esculentum partial mRNA for Aux/IAA protein (iaa9 gene) Length = 1752 Score = 73.8 bits (37), Expect = 5e-10 Identities = 94/113 (83%) Strand = Plus / Minus Query: 376 gcccttggtgcaagaccgatggcttcggaacccttcatgatcctcaagcgtttgcatgaa 435 |||||||| || || || ||||| || ||||| |||||||||||||| | |||||| | | Sbjct: 1256 gcccttggggccaggccaatggcatctgaacctttcatgatcctcaaccttttgcaagta 1197 Query: 436 gcaacaaacatctcccatgggacgtctccaacaagcatccagtcgccatcctt 488 | | |||||||||||| ||||| || || |||||||||||||| |||||||| Sbjct: 1196 tcgataaacatctcccaggggacatcaccgacaagcatccagtccccatcctt 1144
>gb|DQ115325.1| Lycopersicon esculentum AUX/IAA protein (IAA4) mRNA, complete cds Length = 1707 Score = 73.8 bits (37), Expect = 5e-10 Identities = 94/113 (83%) Strand = Plus / Minus Query: 376 gcccttggtgcaagaccgatggcttcggaacccttcatgatcctcaagcgtttgcatgaa 435 |||||||| || || || ||||| || ||||| |||||||||||||| | |||||| | | Sbjct: 1257 gcccttggggccaggccaatggcatctgaacctttcatgatcctcaaccttttgcaagta 1198 Query: 436 gcaacaaacatctcccatgggacgtctccaacaagcatccagtcgccatcctt 488 | | |||||||||||| ||||| || || |||||||||||||| |||||||| Sbjct: 1197 tcgataaacatctcccaggggacatcaccgacaagcatccagtccccatcctt 1145
>dbj|AP006634.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT15O18, TM0086, complete sequence Length = 133572 Score = 73.8 bits (37), Expect = 5e-10 Identities = 49/53 (92%) Strand = Plus / Minus Query: 439 acaaacatctcccatgggacgtctccaacaagcatccagtcgccatccttgtc 491 ||||||||||||||||| || |||||||| ||||||||||| ||||||||||| Sbjct: 27206 acaaacatctcccatggaacatctccaactagcatccagtcaccatccttgtc 27154
>dbj|AK106192.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-208-E03, full insert sequence Length = 1249 Score = 71.9 bits (36), Expect = 2e-09 Identities = 48/52 (92%) Strand = Plus / Minus Query: 440 caaacatctcccatgggacgtctccaacaagcatccagtcgccatccttgtc 491 |||||||||||||||| || || ||||||||||||||||| ||||||||||| Sbjct: 787 caaacatctcccatggaacatcgccaacaagcatccagtctccatccttgtc 736
>dbj|AK105936.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-205-B07, full insert sequence Length = 1240 Score = 71.9 bits (36), Expect = 2e-09 Identities = 48/52 (92%) Strand = Plus / Minus Query: 440 caaacatctcccatgggacgtctccaacaagcatccagtcgccatccttgtc 491 |||||||||||||||| || || ||||||||||||||||| ||||||||||| Sbjct: 778 caaacatctcccatggaacatcgccaacaagcatccagtctccatccttgtc 727
>dbj|AK102762.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033107D08, full insert sequence Length = 1150 Score = 71.9 bits (36), Expect = 2e-09 Identities = 48/52 (92%) Strand = Plus / Minus Query: 440 caaacatctcccatgggacgtctccaacaagcatccagtcgccatccttgtc 491 |||||||||||||||| || || ||||||||||||||||| ||||||||||| Sbjct: 758 caaacatctcccatggaacatcgccaacaagcatccagtctccatccttgtc 707
>dbj|AK069902.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023034K17, full insert sequence Length = 1306 Score = 71.9 bits (36), Expect = 2e-09 Identities = 48/52 (92%) Strand = Plus / Minus Query: 440 caaacatctcccatgggacgtctccaacaagcatccagtcgccatccttgtc 491 |||||||||||||||| || || ||||||||||||||||| ||||||||||| Sbjct: 844 caaacatctcccatggaacatcgccaacaagcatccagtctccatccttgtc 793
>gb|AY289604.1| Pinus taeda auxin-induced protein 5 (IAA5) mRNA, complete cds Length = 1289 Score = 69.9 bits (35), Expect = 7e-09 Identities = 80/95 (84%) Strand = Plus / Minus Query: 397 gcttcggaacccttcatgatcctcaagcgtttgcatgaagcaacaaacatctcccatggg 456 ||||| ||| ||||||||||||||| | | ||| ||| |||||||||||| |||||| Sbjct: 830 gcttctgaagccttcatgatcctcattctctggcaggaatcaacaaacatctgccatgga 771 Query: 457 acgtctccaacaagcatccagtcgccatccttgtc 491 || || || |||||||||||||| ||||||||||| Sbjct: 770 acatcgcctacaagcatccagtctccatccttgtc 736
>gb|AY289600.1| Pinus taeda auxin-induced protein 1 (IAA1) mRNA, complete cds Length = 1209 Score = 67.9 bits (34), Expect = 3e-08 Identities = 97/118 (82%) Strand = Plus / Minus Query: 374 tggcccttggtgcaagaccgatggcttcggaacccttcatgatcctcaagcgtttgcatg 433 |||||||||| || | ||| || ||||| || ||||||| ||||||| | || ||| | Sbjct: 733 tggcccttggagctaaaccaatagcttctcaagccttcattatcctcattctttggcagg 674 Query: 434 aagcaacaaacatctcccatgggacgtctccaacaagcatccagtcgccatccttgtc 491 || |||||||||| ||||| ||||| || || |||||||||||||| ||||||||||| Sbjct: 673 aatcaacaaacatatcccaggggacatcgcctacaagcatccagtctccatccttgtc 616
>dbj|D14413.1|VIRAUX22B Vigna radiata auxin-regulated mRNA Length = 1165 Score = 67.9 bits (34), Expect = 3e-08 Identities = 58/66 (87%) Strand = Plus / Minus Query: 426 tttgcatgaagcaacaaacatctcccatgggacgtctccaacaagcatccagtcgccatc 485 |||||| |||| |||||||| |||||||| || |||||||| ||||||||||| ||||| Sbjct: 595 tttgcaagaagtcacaaacatgtcccatggtacatctccaactagcatccagtcaccatc 536 Query: 486 cttgtc 491 |||||| Sbjct: 535 cttgtc 530
>emb|AM040278.1| Capsicum chinense mRNA for auxin induced protein (aux/iaa gene) Length = 1778 Score = 65.9 bits (33), Expect = 1e-07 Identities = 93/113 (82%) Strand = Plus / Minus Query: 376 gcccttggtgcaagaccgatggcttcggaacccttcatgatcctcaagcgtttgcatgaa 435 |||||||| || ||||| ||||| || ||||| ||||||||||||| | ||||| | | Sbjct: 1288 gcccttggggctagaccaatggcatctgaacctttcatgatcctcagcctcttgcaggta 1229 Query: 436 gcaacaaacatctcccatgggacgtctccaacaagcatccagtcgccatcctt 488 ||| |||||||||||| ||||| || || || ||||||||||| |||||||| Sbjct: 1228 tcaataaacatctcccaggggacatcaccgactagcatccagtccccatcctt 1176
>gb|DQ252491.1| Solanum tuberosum clone 060E03 Aux/IAA protein-like mRNA, complete cds Length = 1590 Score = 65.9 bits (33), Expect = 1e-07 Identities = 93/113 (82%) Strand = Plus / Minus Query: 376 gcccttggtgcaagaccgatggcttcggaacccttcatgatcctcaagcgtttgcatgaa 435 |||||||| || || || ||||| || ||||| |||||||||||||| | ||||| | Sbjct: 1159 gcccttggggcgaggccaatggcatctgaacctttcatgatcctcaacctcttgcaagtg 1100 Query: 436 gcaacaaacatctcccatgggacgtctccaacaagcatccagtcgccatcctt 488 ||| |||||||||||| || || || ||||||||||||||||| |||||||| Sbjct: 1099 tcaataaacatctcccaaggtacatcaccaacaagcatccagtccccatcctt 1047
>ref|NM_117535.4| Arabidopsis thaliana IAA14 (SOLITARY ROOT); transcription factor AT4G14550 (IAA14) mRNA, complete cds Length = 1482 Score = 63.9 bits (32), Expect = 5e-07 Identities = 110/136 (80%) Strand = Plus / Minus Query: 356 tgttcttgtacttgtccttggcccttggtgcaagaccgatggcttcggaacccttcatga 415 |||||||| |||| ||| | || ||||| ||||| || || |||||||| || ||||| | Sbjct: 775 tgttcttgaacttctccattgctcttggagcaagtccaattgcttcggatcctttcatta 716 Query: 416 tcctcaagcgtttgcatgaagcaacaaacatctcccatgggacgtctccaacaagcatcc 475 | | ||| ||||||||||| | ||||||||| ||| ||||| || ||||| ||||||| Sbjct: 715 tgcgcaaacgtttgcatgactcgacaaacatcggccaggggacatcaccaacgagcatcc 656 Query: 476 agtcgccatccttgtc 491 |||| ||||| ||||| Sbjct: 655 agtcaccatctttgtc 640
>ref|NM_125965.2| Arabidopsis thaliana IAA9; transcription factor AT5G65670 (IAA9) transcript variant AT5G65670.2 mRNA, complete cds Length = 1531 Score = 63.9 bits (32), Expect = 5e-07 Identities = 44/48 (91%) Strand = Plus / Minus Query: 441 aaacatctcccatgggacgtctccaacaagcatccagtcgccatcctt 488 |||||||||||| || || |||||||||||||||||||| |||||||| Sbjct: 1191 aaacatctcccacggaacatctccaacaagcatccagtcaccatcctt 1144
>ref|NM_180944.1| Arabidopsis thaliana IAA9; transcription factor AT5G65670 (IAA9) transcript variant AT5G65670.1 mRNA, complete cds Length = 1537 Score = 63.9 bits (32), Expect = 5e-07 Identities = 44/48 (91%) Strand = Plus / Minus Query: 441 aaacatctcccatgggacgtctccaacaagcatccagtcgccatcctt 488 |||||||||||| || || |||||||||||||||||||| |||||||| Sbjct: 1191 aaacatctcccacggaacatctccaacaagcatccagtcaccatcctt 1144
>gb|AY781902.1| Saccharum hybrid cultivar isolate c57 auxin-induced protein mRNA, partial cds Length = 1046 Score = 63.9 bits (32), Expect = 5e-07 Identities = 110/136 (80%) Strand = Plus / Minus Query: 356 tgttcttgtacttgtccttggcccttggtgcaagaccgatggcttcggaacccttcatga 415 |||||||| | || ||| ||||||| || || || || |||||||| || || ||||||| Sbjct: 561 tgttcttgcatttctccatggccctcggcgcgaggccaatggcttctgatcctttcatga 502 Query: 416 tcctcaagcgtttgcatgaagcaacaaacatctcccatgggacgtctccaacaagcatcc 475 ||| | ||| |||||||| | || ||||||||||| || ||||| || || ||||||| Sbjct: 501 tccgaaggcgcttgcatgattcgacgaacatctcccacggcacgtcgccgacgagcatcc 442 Query: 476 agtcgccatccttgtc 491 ||||||| |||||||| Sbjct: 441 agtcgccctccttgtc 426
>gb|AF334718.1| Arabidopsis thaliana IAA14 (At4g14550) mRNA, complete cds Length = 687 Score = 63.9 bits (32), Expect = 5e-07 Identities = 110/136 (80%) Strand = Plus / Minus Query: 356 tgttcttgtacttgtccttggcccttggtgcaagaccgatggcttcggaacccttcatga 415 |||||||| |||| ||| | || ||||| ||||| || || |||||||| || ||||| | Sbjct: 679 tgttcttgaacttctccattgctcttggagcaagtccaattgcttcggatcctttcatta 620 Query: 416 tcctcaagcgtttgcatgaagcaacaaacatctcccatgggacgtctccaacaagcatcc 475 | | ||| ||||||||||| | ||||||||| ||| ||||| || ||||| ||||||| Sbjct: 619 tgcgcaaacgtttgcatgactcgacaaacatcggccaggggacatcaccaacgagcatcc 560 Query: 476 agtcgccatccttgtc 491 |||| ||||| ||||| Sbjct: 559 agtcaccatctttgtc 544
>gb|AY070451.1| Arabidopsis thaliana At5g65670 mRNA sequence Length = 1449 Score = 63.9 bits (32), Expect = 5e-07 Identities = 44/48 (91%) Strand = Plus / Minus Query: 441 aaacatctcccatgggacgtctccaacaagcatccagtcgccatcctt 488 |||||||||||| || || |||||||||||||||||||| |||||||| Sbjct: 1163 aaacatctcccacggaacatctccaacaagcatccagtcaccatcctt 1116
>gb|AY962829.1| Prunus armeniaca auxin-induced protein mRNA, partial cds Length = 364 Score = 63.9 bits (32), Expect = 5e-07 Identities = 71/84 (84%) Strand = Plus / Minus Query: 408 cttcatgatcctcaagcgtttgcatgaagcaacaaacatctcccatgggacgtctccaac 467 |||||||||||||| | |||||||| || |||||||||||| ||||||||||| || Sbjct: 180 cttcatgatcctcagcctcttgcatgactcagtaaacatctcccaagggacgtctcccac 121 Query: 468 aagcatccagtcgccatccttgtc 491 ||||||||||| ||||| ||||| Sbjct: 120 tagcatccagtctccatctttgtc 97
>gb|AF334715.1| Arabidopsis thaliana clone C00016 (e) auxin-induced protein IAA9 (At5g65670) mRNA, complete cds Length = 1017 Score = 63.9 bits (32), Expect = 5e-07 Identities = 44/48 (91%) Strand = Plus / Minus Query: 441 aaacatctcccatgggacgtctccaacaagcatccagtcgccatcctt 488 |||||||||||| || || |||||||||||||||||||| |||||||| Sbjct: 918 aaacatctcccacggaacatctccaacaagcatccagtcaccatcctt 871
>emb|BX827786.1|CNS0A3TV Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH21ZC02 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1476 Score = 63.9 bits (32), Expect = 5e-07 Identities = 110/136 (80%) Strand = Plus / Minus Query: 356 tgttcttgtacttgtccttggcccttggtgcaagaccgatggcttcggaacccttcatga 415 |||||||| |||| ||| | || ||||| ||||| || || |||||||| || ||||| | Sbjct: 768 tgttcttgaacttctccattgctcttggagcaagtccaattgcttcggatcctttcatta 709 Query: 416 tcctcaagcgtttgcatgaagcaacaaacatctcccatgggacgtctccaacaagcatcc 475 | | ||| ||||||||||| | ||||||||| ||| ||||| || ||||| ||||||| Sbjct: 708 tgcccaaacgtttgcatgactcgacaaacatcggccaggggacatcaccaacgagcatcc 649 Query: 476 agtcgccatccttgtc 491 |||| ||||| ||||| Sbjct: 648 agtcaccatctttgtc 633
>gb|AY087089.1| Arabidopsis thaliana clone 31563 mRNA, complete sequence Length = 1456 Score = 63.9 bits (32), Expect = 5e-07 Identities = 44/48 (91%) Strand = Plus / Minus Query: 441 aaacatctcccatgggacgtctccaacaagcatccagtcgccatcctt 488 |||||||||||| || || |||||||||||||||||||| |||||||| Sbjct: 1195 aaacatctcccacggaacatctccaacaagcatccagtcaccatcctt 1148
>gb|AY103836.1| Zea mays PCO135053 mRNA sequence Length = 1519 Score = 63.9 bits (32), Expect = 5e-07 Identities = 110/136 (80%) Strand = Plus / Minus Query: 356 tgttcttgtacttgtccttggcccttggtgcaagaccgatggcttcggaacccttcatga 415 |||||||| | || ||| ||||||||||||| || || |||||||| || || ||||||| Sbjct: 988 tgttcttgcatttctccatggcccttggtgccaggccaatggcttctgatcctttcatga 929 Query: 416 tcctcaagcgtttgcatgaagcaacaaacatctcccatgggacgtctccaacaagcatcc 475 ||| | ||| |||||||| | || ||||||||||| || || || || || ||||||| Sbjct: 928 tccgaaggcgcttgcatgattcgacgaacatctcccacggcacatcgccgacgagcatcc 869 Query: 476 agtcgccatccttgtc 491 |||| || |||||||| Sbjct: 868 agtccccgtccttgtc 853
>gb|U18416.1|ATU18416 Arabidopsis thaliana IAA14 (IAA14) gene, partial cds Length = 732 Score = 63.9 bits (32), Expect = 5e-07 Identities = 110/136 (80%) Strand = Plus / Minus Query: 356 tgttcttgtacttgtccttggcccttggtgcaagaccgatggcttcggaacccttcatga 415 |||||||| |||| ||| | || ||||| ||||| || || |||||||| || ||||| | Sbjct: 487 tgttcttgaacttctccattgctcttggagcaagtccaattgcttcggatcctttcatta 428 Query: 416 tcctcaagcgtttgcatgaagcaacaaacatctcccatgggacgtctccaacaagcatcc 475 | | ||| ||||||||||| | ||||||||| ||| ||||| || ||||| ||||||| Sbjct: 427 tgcgcaaacgtttgcatgactcgacaaacatcggccaggggacatcaccaacgagcatcc 368 Query: 476 agtcgccatccttgtc 491 |||| ||||| ||||| Sbjct: 367 agtcaccatctttgtc 352
>gb|U18411.1|ATU18411 Arabidopsis thaliana IAA9 (IAA9) gene, complete cds Length = 1425 Score = 63.9 bits (32), Expect = 5e-07 Identities = 44/48 (91%) Strand = Plus / Minus Query: 441 aaacatctcccatgggacgtctccaacaagcatccagtcgccatcctt 488 |||||||||||| || || |||||||||||||||||||| |||||||| Sbjct: 1151 aaacatctcccacggaacatctccaacaagcatccagtcaccatcctt 1104
>dbj|AB029148.1| Cucumis sativus mRNA expressed in cucumber hypocotyls, complete cds Length = 1187 Score = 63.9 bits (32), Expect = 5e-07 Identities = 59/68 (86%) Strand = Plus / Minus Query: 424 cgtttgcatgaagcaacaaacatctcccatgggacgtctccaacaagcatccagtcgcca 483 |||||||| || |||||||||||||||| || || ||||||||||||||||| || ||| Sbjct: 748 cgtttgcaagattcaacaaacatctcccacggaacatctccaacaagcatccaatcacca 689 Query: 484 tccttgtc 491 || ||||| Sbjct: 688 tctttgtc 681
>ref|NM_113205.1| Arabidopsis thaliana IAA7 (AUXIN RESISTANT 2); transcription factor AT3G23050 (IAA7) transcript variant AT3G23050.1 mRNA, complete cds Length = 1196 Score = 61.9 bits (31), Expect = 2e-06 Identities = 79/95 (83%) Strand = Plus / Minus Query: 397 gcttcggaacccttcatgatcctcaagcgtttgcatgaagcaacaaacatctcccatggg 456 ||||| || |||||||| || | ||| |||||||| || | |||||||| ||||||||| Sbjct: 737 gcttcagatcccttcataatgcgcaaacgtttgcaagactcgacaaacatttcccatggg 678 Query: 457 acgtctccaacaagcatccagtcgccatccttgtc 491 || || ||||| ||||||||||| ||||| ||||| Sbjct: 677 acatcgccaacgagcatccagtcaccatctttgtc 643
>gb|BT012096.1| Arabidopsis thaliana At3g23050 mRNA sequence Length = 732 Score = 61.9 bits (31), Expect = 2e-06 Identities = 79/95 (83%) Strand = Plus / Minus Query: 397 gcttcggaacccttcatgatcctcaagcgtttgcatgaagcaacaaacatctcccatggg 456 ||||| || |||||||| || | ||| |||||||| || | |||||||| ||||||||| Sbjct: 680 gcttcagatcccttcataatgcgcaaacgtttgcaagactcgacaaacatttcccatggg 621 Query: 457 acgtctccaacaagcatccagtcgccatccttgtc 491 || || ||||| ||||||||||| ||||| ||||| Sbjct: 620 acatcgccaacgagcatccagtcaccatctttgtc 586
>gb|AY072461.1| Arabidopsis thaliana auxin-responsive protein IAA7 (At3g23050; MXC7.8) mRNA, complete cds Length = 782 Score = 61.9 bits (31), Expect = 2e-06 Identities = 79/95 (83%) Strand = Plus / Minus Query: 397 gcttcggaacccttcatgatcctcaagcgtttgcatgaagcaacaaacatctcccatggg 456 ||||| || |||||||| || | ||| |||||||| || | |||||||| ||||||||| Sbjct: 680 gcttcagatcccttcataatgcgcaaacgtttgcaagactcgacaaacatttcccatggg 621 Query: 457 acgtctccaacaagcatccagtcgccatccttgtc 491 || || ||||| ||||||||||| ||||| ||||| Sbjct: 620 acatcgccaacgagcatccagtcaccatctttgtc 586
>gb|AY054651.1| Arabidopsis thaliana auxin-responsive protein IAA7 (At3g23050; MXC7.8) mRNA, complete cds Length = 935 Score = 61.9 bits (31), Expect = 2e-06 Identities = 79/95 (83%) Strand = Plus / Minus Query: 397 gcttcggaacccttcatgatcctcaagcgtttgcatgaagcaacaaacatctcccatggg 456 ||||| || |||||||| || | ||| |||||||| || | |||||||| ||||||||| Sbjct: 735 gcttcagatcccttcataatgcgcaaacgtttgcaagactcgacaaacatttcccatggg 676 Query: 457 acgtctccaacaagcatccagtcgccatccttgtc 491 || || ||||| ||||||||||| ||||| ||||| Sbjct: 675 acatcgccaacgagcatccagtcaccatctttgtc 641
>gb|AF332395.1| Arabidopsis thaliana clone C00014 (o) indoleacetic acid-inducible protein IAA7 (At3g23050) mRNA, complete cds Length = 732 Score = 61.9 bits (31), Expect = 2e-06 Identities = 79/95 (83%) Strand = Plus / Minus Query: 397 gcttcggaacccttcatgatcctcaagcgtttgcatgaagcaacaaacatctcccatggg 456 ||||| || |||||||| || | ||| |||||||| || | |||||||| ||||||||| Sbjct: 680 gcttcagatcccttcataatgcgcaaacgtttgcaagactcgacaaacatttcccatggg 621 Query: 457 acgtctccaacaagcatccagtcgccatccttgtc 491 || || ||||| ||||||||||| ||||| ||||| Sbjct: 620 acatcgccaacgagcatccagtcaccatctttgtc 586
>emb|BX825560.1|CNS0A534 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL44ZG09 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 946 Score = 61.9 bits (31), Expect = 2e-06 Identities = 79/95 (83%) Strand = Plus / Minus Query: 397 gcttcggaacccttcatgatcctcaagcgtttgcatgaagcaacaaacatctcccatggg 456 ||||| || |||||||| || | ||| |||||||| || | |||||||| ||||||||| Sbjct: 678 gcttcagatcccttcataatgcgcaaacgtttgcaagactcgacaaacatttcccatggg 619 Query: 457 acgtctccaacaagcatccagtcgccatccttgtc 491 || || ||||| ||||||||||| ||||| ||||| Sbjct: 618 acatcgccaacgagcatccagtcaccatctttgtc 584
>gb|AY087765.1| Arabidopsis thaliana clone 38286 mRNA, complete sequence Length = 1195 Score = 61.9 bits (31), Expect = 2e-06 Identities = 79/95 (83%) Strand = Plus / Minus Query: 397 gcttcggaacccttcatgatcctcaagcgtttgcatgaagcaacaaacatctcccatggg 456 ||||| || |||||||| || | ||| |||||||| || | |||||||| ||||||||| Sbjct: 737 gcttcagatcccttcataatgcgcaaacgtttgcaagactcgacaaacatttcccatggg 678 Query: 457 acgtctccaacaagcatccagtcgccatccttgtc 491 || || ||||| ||||||||||| ||||| ||||| Sbjct: 677 acatcgccaacgagcatccagtcaccatctttgtc 643
>gb|U18409.1|ATU18409 Arabidopsis thaliana IAA7 (IAA7) gene, complete cds Length = 899 Score = 61.9 bits (31), Expect = 2e-06 Identities = 79/95 (83%) Strand = Plus / Minus Query: 397 gcttcggaacccttcatgatcctcaagcgtttgcatgaagcaacaaacatctcccatggg 456 ||||| || |||||||| || | ||| |||||||| || | |||||||| ||||||||| Sbjct: 702 gcttcagatcccttcataatgcgcaaacgtttgcaagactcgacaaacatttcccatggg 643 Query: 457 acgtctccaacaagcatccagtcgccatccttgtc 491 || || ||||| ||||||||||| ||||| ||||| Sbjct: 642 acatcgccaacgagcatccagtcaccatctttgtc 608
>dbj|AB004931.1| Vigna radiata mRNA for Aux22c, complete cds Length = 899 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 441 aaacatctcccatgggacgtctccaacaagcatccagtcgccatccttgtc 491 |||||||||||| || || |||||||| ||||||||||||||||| ||||| Sbjct: 475 aaacatctcccaaggaacatctccaaccagcatccagtcgccatctttgtc 425
>ref|NM_188615.1| Oryza sativa (japonica cultivar-group), Ozsa8218 predicted mRNA Length = 846 Score = 60.0 bits (30), Expect = 7e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 442 aacatctcccatgggacgtctccaacaagcatccagtcgccatccttgtc 491 |||||||||||||| || || ||||| ||||||||||| ||||||||||| Sbjct: 752 aacatctcccatggaacatcaccaaccagcatccagtcaccatccttgtc 703
>dbj|AK104654.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-311-C04, full insert sequence Length = 1209 Score = 60.0 bits (30), Expect = 7e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 442 aacatctcccatgggacgtctccaacaagcatccagtcgccatccttgtc 491 |||||||||||||| || || ||||| ||||||||||| ||||||||||| Sbjct: 736 aacatctcccatggaacatcaccaaccagcatccagtcaccatccttgtc 687
>dbj|AK072001.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013094L17, full insert sequence Length = 1291 Score = 60.0 bits (30), Expect = 7e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 442 aacatctcccatgggacgtctccaacaagcatccagtcgccatccttgtc 491 |||||||||||||| || || ||||| ||||||||||| ||||||||||| Sbjct: 833 aacatctcccatggaacatcaccaaccagcatccagtcaccatccttgtc 784
>dbj|AK066156.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013054L16, full insert sequence Length = 1194 Score = 60.0 bits (30), Expect = 7e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 442 aacatctcccatgggacgtctccaacaagcatccagtcgccatccttgtc 491 |||||||||||||| || || ||||| ||||||||||| ||||||||||| Sbjct: 784 aacatctcccatggaacatcaccaaccagcatccagtcaccatccttgtc 735
>gb|AY104734.1| Zea mays PCO138559 mRNA sequence Length = 1116 Score = 60.0 bits (30), Expect = 7e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 442 aacatctcccatgggacgtctccaacaagcatccagtcgccatccttgtc 491 ||||||| ||| |||||||| || || ||||||||||||||||||||||| Sbjct: 649 aacatcttccaggggacgtcgccgacgagcatccagtcgccatccttgtc 600
>dbj|D14412.1|VIRAUX22A Vigna radiata auxin-regulated mRNA Length = 838 Score = 60.0 bits (30), Expect = 7e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 442 aacatctcccatgggacgtctccaacaagcatccagtcgccatccttgtc 491 ||||| |||||||| || |||||||||||||||||||| ||||| ||||| Sbjct: 540 aacatttcccatggcacatctccaacaagcatccagtcaccatctttgtc 491
>ref|XM_550382.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1054 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 439 acaaacatctcccatgggacgtctccaacaagcatccagtcgccatccttgtc 491 |||||||||| ||| |||||||| || || |||||||||||||| |||||||| Sbjct: 648 acaaacatcttccaggggacgtcgccgacgagcatccagtcgccgtccttgtc 596
>gb|AC145477.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1402B06, complete sequence Length = 134001 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 447 ctcccatgggacgtctccaacaagcatccagtcgccatccttgtc 491 ||||||||| || || ||||||||||||||||| ||||||||||| Sbjct: 130362 ctcccatggaacatcgccaacaagcatccagtctccatccttgtc 130318
>gb|AC145396.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0042F15, complete sequence Length = 162959 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 447 ctcccatgggacgtctccaacaagcatccagtcgccatccttgtc 491 ||||||||| || || ||||||||||||||||| ||||||||||| Sbjct: 37551 ctcccatggaacatcgccaacaagcatccagtctccatccttgtc 37507
>gb|AY098938.1| Solanum tuberosum Aux/IAA protein mRNA, complete cds Length = 1589 Score = 58.0 bits (29), Expect = 3e-05 Identities = 92/113 (81%) Strand = Plus / Minus Query: 376 gcccttggtgcaagaccgatggcttcggaacccttcatgatcctcaagcgtttgcatgaa 435 |||||||| || || || ||||| || ||||| |||||||||||||| | ||||| | Sbjct: 1222 gcccttggggcgaggccaatggcatctgaacctttcatgatcctcaacctcttgcaagtg 1163 Query: 436 gcaacaaacatctcccatgggacgtctccaacaagcatccagtcgccatcctt 488 ||| |||||||||||| || || || || |||||||||||||| |||||||| Sbjct: 1162 tcaataaacatctcccaaggtacatcaccgacaagcatccagtccccatcctt 1110
>gb|AY289603.1| Pinus taeda auxin-induced protein 4 (IAA4) mRNA, complete cds Length = 1231 Score = 58.0 bits (29), Expect = 3e-05 Identities = 74/89 (83%) Strand = Plus / Minus Query: 397 gcttcggaacccttcatgatcctcaagcgtttgcatgaagcaacaaacatctcccatggg 456 ||||| ||| |||||||||||| || | || ||| ||| |||||||||||| ||||||| Sbjct: 685 gcttctgaagccttcatgatccgcactctttggcaggaatcaacaaacatctgccatggg 626 Query: 457 acgtctccaacaagcatccagtcgccatc 485 || || || ||||||||||| || ||||| Sbjct: 625 acatcgcctacaagcatccaatctccatc 597
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 447 ctcccatgggacgtctccaacaagcatccagtcgccatccttgtc 491 ||||||||||||||| || || |||||||||||||| |||||||| Sbjct: 25345350 ctcccatgggacgtcgccgacgagcatccagtcgccgtccttgtc 25345394
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 447 ctcccatgggacgtctccaacaagcatccagtcgccatccttgtc 491 ||||||||| || || ||||||||||||||||| ||||||||||| Sbjct: 7852776 ctcccatggaacatcgccaacaagcatccagtctccatccttgtc 7852732 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 454 gggacgtctccaacaagcatccagtcgccatccttgtc 491 ||||||||||| || |||||||||||||| |||||||| Sbjct: 4624577 gggacgtctccgacgagcatccagtcgccgtccttgtc 4624614 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 463 ccaacaagcatccagtcgccatccttgtc 491 ||||||||||||||||| |||||||||| Sbjct: 27627750 ccaacaagcatccagtcagcatccttgtc 27627778
>dbj|AK109373.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-208-G03, full insert sequence Length = 1118 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 439 acaaacatctcccatgggacgtctccaacaagcatccagtcgccatccttgtc 491 |||||||||| ||| |||||||| || || |||||||||||||| |||||||| Sbjct: 648 acaaacatcttccaggggacgtcgccgacgagcatccagtcgccgtccttgtc 596
>emb|X68217.1|PSIAA6R P.sativum mRNA for auxin-induced protein (clone pIAA6) Length = 702 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%) Strand = Plus / Minus Query: 427 ttgcatgaagcaacaaacatctcccatgggacgtctccaacaagcatccagtcgccatcc 486 |||||||| ||| |||||||||||| ||||| |||||||| |||||||| || ||||| Sbjct: 393 ttgcatgactcaataaacatctcccaagggacatctccaaccagcatccaatcaccatct 334 Query: 487 ttgtc 491 ||||| Sbjct: 333 ttgtc 329
>dbj|AK100800.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023121G17, full insert sequence Length = 1078 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 439 acaaacatctcccatgggacgtctccaacaagcatccagtcgccatccttgtc 491 |||||||||| ||| |||||||| || || |||||||||||||| |||||||| Sbjct: 650 acaaacatcttccaggggacgtcgccgacgagcatccagtcgccgtccttgtc 598
>dbj|AK100080.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023001M24, full insert sequence Length = 1204 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 439 acaaacatctcccatgggacgtctccaacaagcatccagtcgccatccttgtc 491 |||||||| | ||| ||||||||||| || |||||||||||||| |||||||| Sbjct: 695 acaaacattttccaggggacgtctccgacgagcatccagtcgccgtccttgtc 643
>dbj|AK069242.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023010B20, full insert sequence Length = 1089 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 439 acaaacatctcccatgggacgtctccaacaagcatccagtcgccatccttgtc 491 |||||||||| ||| |||||||| || || |||||||||||||| |||||||| Sbjct: 640 acaaacatcttccaggggacgtcgccgacgagcatccagtcgccgtccttgtc 588
>dbj|AK061796.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-039-G05, full insert sequence Length = 1201 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 439 acaaacatctcccatgggacgtctccaacaagcatccagtcgccatccttgtc 491 |||||||| | ||| ||||||||||| || |||||||||||||| |||||||| Sbjct: 692 acaaacattttccaggggacgtctccgacgagcatccagtcgccgtccttgtc 640
>dbj|AK060091.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-307-D01, full insert sequence Length = 1054 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 439 acaaacatctcccatgggacgtctccaacaagcatccagtcgccatccttgtc 491 |||||||||| ||| |||||||| || || |||||||||||||| |||||||| Sbjct: 648 acaaacatcttccaggggacgtcgccgacgagcatccagtcgccgtccttgtc 596
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 447 ctcccatgggacgtctccaacaagcatccagtcgccatccttgtc 491 ||||||||||||||| || || |||||||||||||| |||||||| Sbjct: 25273526 ctcccatgggacgtcgccgacgagcatccagtcgccgtccttgtc 25273570
>emb|AL837528.5|CNS08CAR Oryza sativa chromosome 12, . BAC OSJNBb0062H20 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 152914 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 447 ctcccatgggacgtctccaacaagcatccagtcgccatccttgtc 491 ||||||||||||||| || || |||||||||||||| |||||||| Sbjct: 12160 ctcccatgggacgtcgccgacgagcatccagtcgccgtccttgtc 12204
>gb|AY137961.1| Mirabilis jalapa clone SM-36 Aux/IAA1 mRNA, partial cds Length = 291 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Minus Query: 426 tttgcatgaagcaacaaacatctcccatgggacgtctccaacaagcatccagtcgccatc 485 ||||||||| | ||||||||||||||||| || || |||||||||||||| || ||||| Sbjct: 216 tttgcatgactccacaaacatctcccatggaacatcaccaacaagcatccaatctccatc 157
>gb|AY129669.1| Mirabilis jalapa auxin-responsive protein IAA1 mRNA, partial cds Length = 990 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Minus Query: 426 tttgcatgaagcaacaaacatctcccatgggacgtctccaacaagcatccagtcgccatc 485 ||||||||| | ||||||||||||||||| || || |||||||||||||| || ||||| Sbjct: 507 tttgcatgactccacaaacatctcccatggaacatcaccaacaagcatccaatctccatc 448
>gb|AC011437.6|ATAC011437 Arabidopsis thaliana chromosome III BAC F7O18 genomic sequence, complete sequence Length = 95310 Score = 54.0 bits (27), Expect = 4e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 447 ctcccatgggacgtctccaacaagcatccagtcgccatc 485 |||||| || |||||||| |||||||||||||||||||| Sbjct: 67621 ctcccacggtacgtctcctacaagcatccagtcgccatc 67659 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 424 cgtttgcatgaagcaacaaacatc 447 |||||||||||| ||||||||||| Sbjct: 67503 cgtttgcatgaatcaacaaacatc 67526
>emb|BX822145.1|CNS0A5ZY Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB16ZA02 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1329 Score = 54.0 bits (27), Expect = 4e-04 Identities = 78/95 (82%) Strand = Plus / Minus Query: 397 gcttcggaacccttcatgatcctcaagcgtttgcatgaagcaacaaacatctcccatggg 456 ||||| || |||||||| || | ||| |||||||| || | |||||||| ||||||||| Sbjct: 981 gcttcagatcccttcataatgcgcaaacgtttgcaagactcgacaaacatttcccatggg 922 Query: 457 acgtctccaacaagcatccagtcgccatccttgtc 491 || || ||||| |||||||||| ||||| ||||| Sbjct: 921 acatcgccaacgagcatccagttaccatctttgtc 887
>gb|AY090553.1| Zinnia elegans auxin-regulated protein (IAA8) mRNA, complete cds Length = 1499 Score = 54.0 bits (27), Expect = 4e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 442 aacatctcccatgggacgtctccaacaagcatccagtcgccatcctt 488 ||||| |||||||| || ||||||||||||||||| || |||||||| Sbjct: 1159 aacatatcccatggtacatctccaacaagcatccaatcaccatcctt 1113
>gb|AF169830.1|AF169830 Glycine max auxin-induced protein ali50 mRNA, partial cds Length = 731 Score = 54.0 bits (27), Expect = 4e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 439 acaaacatctcccatgggacgtctccaacaagcatccagtcgccatc 485 |||||||||||||||||||| || || || ||||||||||| ||||| Sbjct: 405 acaaacatctcccatgggacatcacccacgagcatccagtcaccatc 359
>gb|J03920.1|SOYAUX22 Soybean auxin-regulated protein (Aux22) mRNA, complete cds Length = 1945 Score = 54.0 bits (27), Expect = 4e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 441 aaacatctcccatgggacgtctccaacaagcatccagtcgccatccttgtc 491 |||||| ||||| ||||| ||||||||||||||||| || ||||| ||||| Sbjct: 1364 aaacatttcccaagggacatctccaacaagcatccaatcaccatctttgtc 1314
>ref|NM_123736.2| Arabidopsis thaliana ATAUX2-11; transcription factor AT5G43700 (ATAUX2-11) mRNA, complete cds Length = 1168 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 438 aacaaacatctcccatgggacgtctccaacaagcatccagtcgccatccttgtc 491 ||||||||||||||| || || || |||||||||||||| || ||||| ||||| Sbjct: 724 aacaaacatctcccaaggaacatcaccaacaagcatccaatcaccatctttgtc 671
>gb|AC144738.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0029B02, complete sequence Length = 156649 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 454 gggacgtctccaacaagcatccagtcgccatccttgtc 491 ||||||||||| || |||||||||||||| |||||||| Sbjct: 135044 gggacgtctccgacgagcatccagtcgccgtccttgtc 135081
>emb|AL021684.1|ATF6H11 Arabidopsis thaliana DNA chromosome 5, BAC clone F6H11 (ESSAII project) Length = 118086 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 447 ctcccatgggacgtctccaacaagcatccagtcgccatcctt 488 |||||| || || |||||||||||||||||||| |||||||| Sbjct: 111842 ctcccacggaacatctccaacaagcatccagtcaccatcctt 111883
>gb|BT005853.1| Arabidopsis thaliana At5g43700 gene, complete cds Length = 561 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 438 aacaaacatctcccatgggacgtctccaacaagcatccagtcgccatccttgtc 491 ||||||||||||||| || || || |||||||||||||| || ||||| ||||| Sbjct: 492 aacaaacatctcccaaggaacatcaccaacaagcatccaatcaccatctttgtc 439
>gb|AF123507.1| Nicotiana tabacum Nt-iaa4.5 deduced protein mRNA, complete cds Length = 993 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Minus Query: 442 aacatctcccatgggacgtctccaacaagcatccagtcgccatccttgtc 491 ||||| |||||||| || |||||||| |||||||| || ||||||||||| Sbjct: 611 aacatatcccatggtacatctccaactagcatccaatcaccatccttgtc 562
>dbj|AB010075.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MPA24 Length = 84440 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 447 ctcccatgggacgtctccaacaagcatccagtcgccatcctt 488 |||||| || || |||||||||||||||||||| |||||||| Sbjct: 7963 ctcccacggaacatctccaacaagcatccagtcaccatcctt 7922
>emb|AJ306830.1|PTR306830 Populus tremula x Populus tremuloides mRNA for aux/IAA protein (IAA7 gene) Length = 1178 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Minus Query: 427 ttgcatgaagcaacaaacatctcccatgggacgtctccaacaagcatccagtcgccatcc 486 |||||||| |||||||||| ||||||||||| || || || ||||||||||| || ||| Sbjct: 683 ttgcatgattcaacaaacatgtcccatgggacatcaccgacgagcatccagtcaccgtcc 624 Query: 487 tt 488 || Sbjct: 623 tt 622
>emb|AJ306825.1|PTR306825 Populus tremula x Populus tremuloides mRNA for aux/IAA protein (IAA2 gene) Length = 1763 Score = 52.0 bits (26), Expect = 0.002 Identities = 86/106 (81%) Strand = Plus / Minus Query: 374 tggcccttggtgcaagaccgatggcttcggaacccttcatgatcctcaagcgtttgcatg 433 |||||||||| || || || ||||| || || | |||||||||||||| | ||||||| Sbjct: 1259 tggcccttggggctaggccaatggcatcagagctcttcatgatcctcagcctcttgcatg 1200 Query: 434 aagcaacaaacatctcccatgggacgtctccaacaagcatccagtc 479 ||| |||||||||||| || || || ||||||||||||||||| Sbjct: 1199 tttcaataaacatctcccagggaacatcgccaacaagcatccagtc 1154
>emb|X68215.1|PSPIAA45R P.sativum mRNA for pIAA4/5.1 Length = 1022 Score = 52.0 bits (26), Expect = 0.002 Identities = 56/66 (84%) Strand = Plus / Minus Query: 426 tttgcatgaagcaacaaacatctcccatgggacgtctccaacaagcatccagtcgccatc 485 |||||| |||| |||||||| |||||||| || |||||||| | |||||| || ||||| Sbjct: 611 tttgcaggaagtcacaaacatgtcccatggaacatctccaactaacatccaatcaccatc 552 Query: 486 cttgtc 491 |||||| Sbjct: 551 cttgtc 546
>dbj|AK069376.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023012K19, full insert sequence Length = 1230 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Minus Query: 442 aacatctcccatgggacgtctccaacaagcatccagtcgccatccttgtc 491 ||||||| ||| |||||||| || || |||||||||||||| |||||||| Sbjct: 623 aacatcttccaggggacgtcgccgacgagcatccagtcgccgtccttgtc 574
>dbj|AP006633.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT12L11, TM0071, complete sequence Length = 69786 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 447 ctcccatgggacgtctccaacaagcatccagtcgccatcctt 488 |||||||||||| ||||| || ||||||||||| |||||||| Sbjct: 23077 ctcccatgggacatctcccacgagcatccagtcaccatcctt 23036
>gb|L15450.1|ATHIAA4A Arabidopsis thaliana auxin-responsive protein (IAA4) mRNA, 5' partial cds Length = 558 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 438 aacaaacatctcccatgggacgtctccaacaagcatccagtcgccatccttgtc 491 ||||||||||||||| || || || |||||||||||||| || ||||| ||||| Sbjct: 492 aacaaacatctcccaaggaacatcaccaacaagcatccaatcaccatctttgtc 439
>dbj|AB004933.1| Vigna radiata mRNA for Aux22e, complete cds Length = 1006 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 450 ccatgggacgtctccaacaagcatccagtcgccatccttgtc 491 |||||| || |||||||| ||||||||||| ||||||||||| Sbjct: 611 ccatggaacatctccaaccagcatccagtcaccatccttgtc 570
>ref|NM_202626.1| Arabidopsis thaliana IAA7 (AUXIN RESISTANT 2) AT3G23050 (IAA7) transcript variant AT3G23050.2 mRNA, complete cds Length = 990 Score = 50.1 bits (25), Expect = 0.007 Identities = 40/45 (88%) Strand = Plus / Minus Query: 447 ctcccatgggacgtctccaacaagcatccagtcgccatccttgtc 491 |||||||||||| || ||||| ||||||||||| ||||| ||||| Sbjct: 687 ctcccatgggacatcgccaacgagcatccagtcaccatctttgtc 643
>ref|XM_507049.1| PREDICTED Oryza sativa (japonica cultivar-group), P0643F09.36-2 mRNA Length = 1298 Score = 50.1 bits (25), Expect = 0.007 Identities = 46/53 (86%) Strand = Plus / Minus Query: 439 acaaacatctcccatgggacgtctccaacaagcatccagtcgccatccttgtc 491 |||||||| ||||| || || |||||||| ||||||||||| |||||| |||| Sbjct: 856 acaaacatttcccaaggaacatctccaacgagcatccagtcaccatccctgtc 804
>ref|XM_468410.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1175 Score = 50.1 bits (25), Expect = 0.007 Identities = 46/53 (86%) Strand = Plus / Minus Query: 439 acaaacatctcccatgggacgtctccaacaagcatccagtcgccatccttgtc 491 |||||||| ||||| || || |||||||| ||||||||||| |||||| |||| Sbjct: 817 acaaacatttcccaaggaacatctccaacgagcatccagtcaccatccctgtc 765
>ref|XM_468411.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1180 Score = 50.1 bits (25), Expect = 0.007 Identities = 46/53 (86%) Strand = Plus / Minus Query: 439 acaaacatctcccatgggacgtctccaacaagcatccagtcgccatccttgtc 491 |||||||| ||||| || || |||||||| ||||||||||| |||||| |||| Sbjct: 822 acaaacatttcccaaggaacatctccaacgagcatccagtcaccatccctgtc 770
>ref|XM_464766.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1408 Score = 50.1 bits (25), Expect = 0.007 Identities = 37/41 (90%) Strand = Plus / Minus Query: 432 tgaagcaacaaacatctcccatgggacgtctccaacaagca 472 ||||| |||||||||| ||||||| || ||||||||||||| Sbjct: 1075 tgaagaaacaaacatcccccatggcacatctccaacaagca 1035
>gb|AC145780.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0069P02 map near S13580, complete sequence Length = 88044 Score = 50.1 bits (25), Expect = 0.007 Identities = 40/45 (88%) Strand = Plus / Minus Query: 447 ctcccatgggacgtctccaacaagcatccagtcgccatccttgtc 491 |||||| |||||||| || || |||||||||||||| |||||||| Sbjct: 5741 ctcccacgggacgtcgccgacgagcatccagtcgccgtccttgtc 5697
>gb|BT014412.1| Lycopersicon esculentum clone 133719R, mRNA sequence Length = 977 Score = 50.1 bits (25), Expect = 0.007 Identities = 43/49 (87%) Strand = Plus / Minus Query: 437 caacaaacatctcccatgggacgtctccaacaagcatccagtcgccatc 485 |||||||||| | |||||| || ||||| |||||||||||||| ||||| Sbjct: 605 caacaaacattttccatggaacatctcctacaagcatccagtctccatc 557
>gb|AC145379.2| Oryza sativa chromosome 3 BAC OSJNBa0010N03 genomic sequence, complete sequence Length = 140980 Score = 50.1 bits (25), Expect = 0.007 Identities = 40/45 (88%) Strand = Plus / Minus Query: 447 ctcccatgggacgtctccaacaagcatccagtcgccatccttgtc 491 |||||| |||||||| || || |||||||||||||| |||||||| Sbjct: 136841 ctcccacgggacgtcgccgacgagcatccagtcgccgtccttgtc 136797
>emb|AJ566558.1|TCA566558 Theobroma cacao microsatellite, clone mTcCIR237 Length = 208 Score = 50.1 bits (25), Expect = 0.007 Identities = 40/45 (88%) Strand = Plus / Minus Query: 447 ctcccatgggacgtctccaacaagcatccagtcgccatccttgtc 491 |||||| || || |||||||| ||||||||||| ||||||||||| Sbjct: 95 ctcccagggaacatctccaactagcatccagtctccatccttgtc 51
>emb|AJ748648.1| Oryza sativa (indica cultivar-group) mRNA for indoleacetic acid-inducible protein homologue Length = 882 Score = 50.1 bits (25), Expect = 0.007 Identities = 46/53 (86%) Strand = Plus / Minus Query: 439 acaaacatctcccatgggacgtctccaacaagcatccagtcgccatccttgtc 491 |||||||| ||||| || || |||||||| ||||||||||| |||||| |||| Sbjct: 723 acaaacatttcccaaggaacatctccaacgagcatccagtcaccatccctgtc 671
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 50.1 bits (25), Expect = 0.007 Identities = 40/45 (88%) Strand = Plus / Minus Query: 447 ctcccatgggacgtctccaacaagcatccagtcgccatccttgtc 491 ||||||||| || || ||||| ||||||||||| ||||||||||| Sbjct: 7251225 ctcccatggaacatcaccaaccagcatccagtcaccatccttgtc 7251181 Score = 48.1 bits (24), Expect = 0.027 Identities = 27/28 (96%) Strand = Plus / Minus Query: 447 ctcccatgggacgtctccaacaagcatc 474 |||||||||| ||||||||||||||||| Sbjct: 40692256 ctcccatgggtcgtctccaacaagcatc 40692229 Score = 44.1 bits (22), Expect = 0.43 Identities = 34/38 (89%) Strand = Plus / Plus Query: 454 gggacgtctccaacaagcatccagtcgccatccttgtc 491 |||||||| || || |||||||||||||| |||||||| Sbjct: 4074630 gggacgtcgccgacgagcatccagtcgccgtccttgtc 4074667 Score = 42.1 bits (21), Expect = 1.7 Identities = 30/33 (90%) Strand = Plus / Minus Query: 447 ctcccatgggacgtctccaacaagcatccagtc 479 ||||||||||||||| ||||| | ||||||||| Sbjct: 10312454 ctcccatgggacgtccccaaccatcatccagtc 10312422
>gb|AY082522.1| Vitis vinifera Aux/IAA protein mRNA, complete cds Length = 1481 Score = 50.1 bits (25), Expect = 0.007 Identities = 67/81 (82%) Strand = Plus / Minus Query: 408 cttcatgatcctcaagcgtttgcatgaagcaacaaacatctcccatgggacgtctccaac 467 |||||||||||||| || ||||||| ||| |||||||| ||| || || || || || Sbjct: 1020 cttcatgatcctcagccgcttgcatgtctcaataaacatctgccagggcacatcacccac 961 Query: 468 aagcatccagtcgccatcctt 488 |||||||||||| |||||||| Sbjct: 960 aagcatccagtcaccatcctt 940
>dbj|AP001859.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0485D09 Length = 150594 Score = 50.1 bits (25), Expect = 0.007 Identities = 40/45 (88%) Strand = Plus / Minus Query: 447 ctcccatgggacgtctccaacaagcatccagtcgccatccttgtc 491 ||||||||| || || ||||| ||||||||||| ||||||||||| Sbjct: 145873 ctcccatggaacatcaccaaccagcatccagtcaccatccttgtc 145829
>gb|AY087635.1| Arabidopsis thaliana clone 37274 mRNA, complete sequence Length = 1403 Score = 50.1 bits (25), Expect = 0.007 Identities = 37/41 (90%) Strand = Plus / Minus Query: 445 atctcccatgggacgtctccaacaagcatccagtcgccatc 485 |||||||||||||| || |||||||||||||| || ||||| Sbjct: 1092 atctcccatgggacatcgccaacaagcatccaatcaccatc 1052
>dbj|AP001550.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0431F01 Length = 143209 Score = 50.1 bits (25), Expect = 0.007 Identities = 40/45 (88%) Strand = Plus / Minus Query: 447 ctcccatgggacgtctccaacaagcatccagtcgccatccttgtc 491 ||||||||| || || ||||| ||||||||||| ||||||||||| Sbjct: 52655 ctcccatggaacatcaccaaccagcatccagtcaccatccttgtc 52611
>dbj|AB026655.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MXC7 Length = 79284 Score = 50.1 bits (25), Expect = 0.007 Identities = 40/45 (88%) Strand = Plus / Minus Query: 447 ctcccatgggacgtctccaacaagcatccagtcgccatccttgtc 491 |||||||||||| || ||||| ||||||||||| ||||| ||||| Sbjct: 36825 ctcccatgggacatcgccaacgagcatccagtcaccatctttgtc 36781
>dbj|AK121870.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033103P10, full insert sequence Length = 1408 Score = 50.1 bits (25), Expect = 0.007 Identities = 37/41 (90%) Strand = Plus / Minus Query: 432 tgaagcaacaaacatctcccatgggacgtctccaacaagca 472 ||||| |||||||||| ||||||| || ||||||||||||| Sbjct: 1075 tgaagaaacaaacatcccccatggcacatctccaacaagca 1035
>emb|AJ417876.1|NTA417876 Nicotiana tabacum mRNA for IAA9 protein Length = 1675 Score = 50.1 bits (25), Expect = 0.007 Identities = 40/45 (88%) Strand = Plus / Minus Query: 441 aaacatctcccatgggacgtctccaacaagcatccagtcgccatc 485 |||||||||||| ||||| || || |||||||||||||| ||||| Sbjct: 1154 aaacatctcccaggggacatcaccgacaagcatccagtcaccatc 1110
>dbj|AK104802.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-040-C05, full insert sequence Length = 1175 Score = 50.1 bits (25), Expect = 0.007 Identities = 46/53 (86%) Strand = Plus / Minus Query: 439 acaaacatctcccatgggacgtctccaacaagcatccagtcgccatccttgtc 491 |||||||| ||||| || || |||||||| ||||||||||| |||||| |||| Sbjct: 817 acaaacatttcccaaggaacatctccaacgagcatccagtcaccatccctgtc 765
>dbj|AK104501.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-E07, full insert sequence Length = 1180 Score = 50.1 bits (25), Expect = 0.007 Identities = 46/53 (86%) Strand = Plus / Minus Query: 439 acaaacatctcccatgggacgtctccaacaagcatccagtcgccatccttgtc 491 |||||||| ||||| || || |||||||| ||||||||||| |||||| |||| Sbjct: 822 acaaacatttcccaaggaacatctccaacgagcatccagtcaccatccctgtc 770
>dbj|AK069892.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023039N11, full insert sequence Length = 1298 Score = 50.1 bits (25), Expect = 0.007 Identities = 46/53 (86%) Strand = Plus / Minus Query: 439 acaaacatctcccatgggacgtctccaacaagcatccagtcgccatccttgtc 491 |||||||| ||||| || || |||||||| ||||||||||| |||||| |||| Sbjct: 856 acaaacatttcccaaggaacatctccaacgagcatccagtcaccatccctgtc 804
>gb|AY103603.1| Zea mays PCO094169 mRNA sequence Length = 1576 Score = 50.1 bits (25), Expect = 0.007 Identities = 40/45 (88%) Strand = Plus / Minus Query: 447 ctcccatgggacgtctccaacaagcatccagtcgccatccttgtc 491 ||||||||| ||||| || ||||||||||| || ||||||||||| Sbjct: 642 ctcccatggtacgtcgccgacaagcatccaatctccatccttgtc 598
>dbj|AP006130.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT36O13, TM0226, complete sequence Length = 140838 Score = 50.1 bits (25), Expect = 0.007 Identities = 40/45 (88%) Strand = Plus / Minus Query: 447 ctcccatgggacgtctccaacaagcatccagtcgccatccttgtc 491 |||||| ||||| |||||||| ||||||||||| ||||| ||||| Sbjct: 57582 ctcccaagggacatctccaaccagcatccagtcaccatctttgtc 57538
>gb|AY289602.1| Pinus taeda auxin-induced protein 3 (IAA3) mRNA, complete cds Length = 1236 Score = 48.1 bits (24), Expect = 0.027 Identities = 45/52 (86%) Strand = Plus / Minus Query: 437 caacaaacatctcccatgggacgtctccaacaagcatccagtcgccatcctt 488 |||||||||||| ||||||||| || || | ||||||||| || |||||||| Sbjct: 780 caacaaacatctgccatgggacatcgcctataagcatccaatctccatcctt 729
>dbj|AP004332.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0093F16 Length = 160925 Score = 48.1 bits (24), Expect = 0.027 Identities = 27/28 (96%) Strand = Plus / Minus Query: 447 ctcccatgggacgtctccaacaagcatc 474 |||||||||| ||||||||||||||||| Sbjct: 134234 ctcccatgggtcgtctccaacaagcatc 134207
>gb|AF154652.1| Nicotiana tabacum clone PR39 mRNA sequence Length = 824 Score = 48.1 bits (24), Expect = 0.027 Identities = 39/44 (88%) Strand = Plus / Minus Query: 442 aacatctcccatgggacgtctccaacaagcatccagtcgccatc 485 ||||||||||| ||||| || || |||||||||||||| ||||| Sbjct: 739 aacatctcccaagggacatcaccgacaagcatccagtcaccatc 696
>dbj|AB026822.1| Cucumis sativus CsIAA2 mRNA for Aux/IAA protein, complete cds Length = 1646 Score = 48.1 bits (24), Expect = 0.027 Identities = 39/44 (88%) Strand = Plus / Minus Query: 442 aacatctcccatgggacgtctccaacaagcatccagtcgccatc 485 ||||||||||| ||||| || ||||| ||||||||||| ||||| Sbjct: 1206 aacatctcccaagggacatcaccaacgagcatccagtcaccatc 1163
>dbj|AB051384.1| Cucumis sativus mRNA, putative member of Aux/IAA gene family, partial cds Length = 375 Score = 48.1 bits (24), Expect = 0.027 Identities = 39/44 (88%) Strand = Plus / Minus Query: 442 aacatctcccatgggacgtctccaacaagcatccagtcgccatc 485 ||||||||||| ||||| || |||||||||||||| || ||||| Sbjct: 63 aacatctcccaagggacatcaccaacaagcatccaatctccatc 20
>ref|NM_189992.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2481 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Minus Query: 448 tcccatgggacgtctccaacaagcatc 474 ||||||||| ||||||||||||||||| Sbjct: 2264 tcccatgggtcgtctccaacaagcatc 2238
>gb|AY137963.1| Mirabilis jalapa clone RS-74 Aux/IAA3 mRNA, partial cds Length = 301 Score = 46.1 bits (23), Expect = 0.11 Identities = 32/35 (91%) Strand = Plus / Minus Query: 442 aacatctcccatgggacgtctccaacaagcatcca 476 ||||||||||| || ||||| |||||||||||||| Sbjct: 53 aacatctcccaaggaacgtcgccaacaagcatcca 19
>gb|AY289601.1| Pinus taeda auxin-induced protein 2 (IAA2) mRNA, complete cds Length = 1774 Score = 46.1 bits (23), Expect = 0.11 Identities = 41/47 (87%) Strand = Plus / Minus Query: 439 acaaacatctcccatgggacgtctccaacaagcatccagtcgccatc 485 ||||||||||||||||| || || || ||||||||||| || ||||| Sbjct: 986 acaaacatctcccatggaacatcgcctacaagcatccaatctccatc 940
>gb|DQ442404.1| Striga asiatica clone StIAA-2 auxin-regulated protein mRNA, complete cds Length = 1126 Score = 46.1 bits (23), Expect = 0.11 Identities = 47/55 (85%) Strand = Plus / Minus Query: 437 caacaaacatctcccatgggacgtctccaacaagcatccagtcgccatccttgtc 491 ||||||||||| |||| || || || || ||||||||||| || ||||||||||| Sbjct: 658 caacaaacatcccccaaggaacatcaccgacaagcatccaatctccatccttgtc 604
>emb|AJ306828.1|PTR306828 Populus tremula x Populus tremuloides mRNA for aux/IAA protein (IAA5 gene) Length = 1251 Score = 46.1 bits (23), Expect = 0.11 Identities = 44/51 (86%) Strand = Plus / Minus Query: 441 aaacatctcccatgggacgtctccaacaagcatccagtcgccatccttgtc 491 ||||||| |||| || || ||||| ||||||||||| || ||||||||||| Sbjct: 836 aaacatcccccaaggaacatctccgacaagcatccaatccccatccttgtc 786
>emb|AJ249996.1|LES249996 Lycopersicon esculentum partial mRNA for auxin-responsive protein (ctd1 gene) Length = 454 Score = 46.1 bits (23), Expect = 0.11 Identities = 68/83 (81%) Strand = Plus / Minus Query: 376 gcccttggtgcaagaccgatggcttcggaacccttcatgatcctcaagcgtttgcatgaa 435 |||||||| || || || ||||| || ||||| |||||||||||||| | |||||| | | Sbjct: 87 gcccttggggccaggccaatggcatctgaacctttcatgatcctcaaccttttgcaagta 28 Query: 436 gcaacaaacatctcccatgggac 458 | | |||||||||||| ||||| Sbjct: 27 tcgataaacatctcccaggggac 5
>dbj|AK072309.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023022C23, full insert sequence Length = 3151 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Minus Query: 448 tcccatgggacgtctccaacaagcatc 474 ||||||||| ||||||||||||||||| Sbjct: 2486 tcccatgggtcgtctccaacaagcatc 2460
>gb|AC090710.16| Homo sapiens 12 BAC RP11-754J4 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 174302 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Minus Query: 138 ctgggacacatggtagggaacatcaca 164 |||||||||| |||||||||||||||| Sbjct: 127135 ctgggacacagggtagggaacatcaca 127109
>dbj|AB071293.1| Oryza sativa OsARF2 mRNA for auxin response factor 2, partial cds Length = 2376 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Minus Query: 448 tcccatgggacgtctccaacaagcatc 474 ||||||||| ||||||||||||||||| Sbjct: 2228 tcccatgggtcgtctccaacaagcatc 2202
>emb|AL590009.10| Human DNA sequence from clone RP11-181P4 on chromosome 6 Contains the WASF1 gene for WAS protein family member 1 and part of the FLJ31482 gene, complete sequence Length = 153046 Score = 44.1 bits (22), Expect = 0.43 Identities = 25/26 (96%) Strand = Plus / Plus Query: 141 ggacacatggtagggaacatcacata 166 ||||||||||| |||||||||||||| Sbjct: 123529 ggacacatggtggggaacatcacata 123554
>emb|AL359502.14| Human DNA sequence from clone RP11-120E13 on chromosome 13 Contains a novel gene and a CpG island, complete sequence Length = 153211 Score = 44.1 bits (22), Expect = 0.43 Identities = 25/26 (96%) Strand = Plus / Plus Query: 141 ggacacatggtagggaacatcacata 166 ||||||||||||||||||| |||||| Sbjct: 32847 ggacacatggtagggaacaacacata 32872
>gb|AY062215.1| Antirrhinum majus auxin-induced AUX/IAA1 mRNA, partial cds Length = 517 Score = 44.1 bits (22), Expect = 0.43 Identities = 43/50 (86%) Strand = Plus / Minus Query: 442 aacatctcccatgggacgtctccaacaagcatccagtcgccatccttgtc 491 ||||| |||||||| || |||||||| | |||||| || ||||||||||| Sbjct: 464 aacatatcccatggcacatctccaaccaacatccaatctccatccttgtc 415
>gb|AC092752.2| Genomic sequence for Mus musculus, clone RP23-51O3, complete sequence Length = 226416 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Plus Query: 144 cacatggtagggaacatcacat 165 |||||||||||||||||||||| Sbjct: 87455 cacatggtagggaacatcacat 87476
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 44.1 bits (22), Expect = 0.43 Identities = 34/38 (89%) Strand = Plus / Minus Query: 454 gggacgtctccaacaagcatccagtcgccatccttgtc 491 |||||||| || || |||||||||||||| |||||||| Sbjct: 23119015 gggacgtcgccgacgagcatccagtcgccgtccttgtc 23118978
>dbj|AP002903.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0509B06 Length = 104515 Score = 44.1 bits (22), Expect = 0.43 Identities = 34/38 (89%) Strand = Plus / Plus Query: 454 gggacgtctccaacaagcatccagtcgccatccttgtc 491 |||||||| || || |||||||||||||| |||||||| Sbjct: 41373 gggacgtcgccgacgagcatccagtcgccgtccttgtc 41410
>dbj|AP002524.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0406H10 Length = 156419 Score = 44.1 bits (22), Expect = 0.43 Identities = 34/38 (89%) Strand = Plus / Plus Query: 454 gggacgtctccaacaagcatccagtcgccatccttgtc 491 |||||||| || || |||||||||||||| |||||||| Sbjct: 21601 gggacgtcgccgacgagcatccagtcgccgtccttgtc 21638
>dbj|AP004236.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0417D05 Length = 165752 Score = 44.1 bits (22), Expect = 0.43 Identities = 34/38 (89%) Strand = Plus / Minus Query: 454 gggacgtctccaacaagcatccagtcgccatccttgtc 491 |||||||| || || |||||||||||||| |||||||| Sbjct: 69663 gggacgtcgccgacgagcatccagtcgccgtccttgtc 69626
>dbj|AK061037.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-205-B07, full insert sequence Length = 1241 Score = 44.1 bits (22), Expect = 0.43 Identities = 34/38 (89%) Strand = Plus / Minus Query: 454 gggacgtctccaacaagcatccagtcgccatccttgtc 491 |||||||| || || |||||||||||||| |||||||| Sbjct: 610 gggacgtcgccgacgagcatccagtcgccgtccttgtc 573
>dbj|AP006680.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT45D03, TM0375a, complete sequence Length = 58157 Score = 44.1 bits (22), Expect = 0.43 Identities = 37/42 (88%) Strand = Plus / Minus Query: 450 ccatgggacgtctccaacaagcatccagtcgccatccttgtc 491 |||||| || |||||||| |||||||| || ||||||||||| Sbjct: 21980 ccatggaacatctccaaccagcatccaatcaccatccttgtc 21939
>gb|AC162889.2| Mus musculus chromosome 7, clone RP24-373A4, complete sequence Length = 136728 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Minus Query: 144 cacatggtagggaacatcacat 165 |||||||||||||||||||||| Sbjct: 135234 cacatggtagggaacatcacat 135213
>dbj|AB004932.1| Vigna radiata mRNA for Aux22d, complete cds Length = 936 Score = 44.1 bits (22), Expect = 0.43 Identities = 37/42 (88%) Strand = Plus / Minus Query: 450 ccatgggacgtctccaacaagcatccagtcgccatccttgtc 491 |||||| || |||||||| ||||||||||| ||||| ||||| Sbjct: 596 ccatggaacatctccaaccagcatccagtcaccatctttgtc 555
>ref|NM_183562.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 570 Score = 42.1 bits (21), Expect = 1.7 Identities = 30/33 (90%) Strand = Plus / Minus Query: 447 ctcccatgggacgtctccaacaagcatccagtc 479 ||||||||||||||| ||||| | ||||||||| Sbjct: 558 ctcccatgggacgtccccaaccatcatccagtc 526
>gb|AC144735.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0001A14, complete sequence Length = 129292 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 463 ccaacaagcatccagtcgccatccttgtc 491 ||||||||||||||||| |||||||||| Sbjct: 95026 ccaacaagcatccagtcagcatccttgtc 95054
>gb|AC147390.4| Pan troglodytes BAC clone RP43-51G14 from 7, complete sequence Length = 168525 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 141 ggacacatggtagggaacatcacataaca 169 ||||||| ||| ||||||||||||||||| Sbjct: 96518 ggacacagggtggggaacatcacataaca 96546
>gb|AF130342.2| Homo sapiens chromosome 8, complete sequence Length = 349992 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 138 ctgggacacatggtagggaacatca 162 |||||||||| |||||||||||||| Sbjct: 238177 ctgggacacagggtagggaacatca 238201
>gb|AC164316.3| Mus musculus BAC clone RP23-16B4 from chromosome 6, complete sequence Length = 222892 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 120 aaaatcaccaagtagattctg 140 ||||||||||||||||||||| Sbjct: 135559 aaaatcaccaagtagattctg 135579
>emb|AL139340.12| Human DNA sequence from clone RP11-7F3 on chromosome 10, complete sequence Length = 187316 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 142 gacacatggtagggaacatcacataacac 170 |||||| || ||||||||||||||||||| Sbjct: 27949 gacacagggcagggaacatcacataacac 27977
>emb|AL137024.27| Human DNA sequence from clone RP11-45A16 on chromosome 9q32-33.3 Contains the 3' end of the PAPPA gene for pregnancy-associated plasma protein A, a novel gene and the 3'end of the ASTN2 gene for astrotactin 2, complete sequence Length = 159430 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 4 aaaatagtgtgcttataattaacaa 28 ||||||||||||||||| ||||||| Sbjct: 25083 aaaatagtgtgcttatagttaacaa 25059
>gb|AY284844.1| Oryctolagus cuniculus alpha s1-casein gene, complete cds Length = 20112 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 256 ataattgaaaacattatatat 276 ||||||||||||||||||||| Sbjct: 6849 ataattgaaaacattatatat 6829
>emb|BX323462.11| Zebrafish DNA sequence from clone CH211-225F16 in linkage group 7, complete sequence Length = 85515 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 116 gaataaaatcaccaagtagat 136 ||||||||||||||||||||| Sbjct: 44704 gaataaaatcaccaagtagat 44724
>gb|AC158504.10| Medicago truncatula clone mth2-151m4, complete sequence Length = 117136 Score = 42.1 bits (21), Expect = 1.7 Identities = 39/45 (86%) Strand = Plus / Plus Query: 447 ctcccatgggacgtctccaacaagcatccagtcgccatccttgtc 491 ||||||||| || || ||||| |||||||| || ||||||||||| Sbjct: 95752 ctcccatggaacatcaccaactagcatccaatcaccatccttgtc 95796
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 42.1 bits (21), Expect = 1.7 Identities = 39/45 (86%) Strand = Plus / Plus Query: 447 ctcccatgggacgtctccaacaagcatccagtcgccatccttgtc 491 |||||| || || |||||||| ||||||||||| |||||| |||| Sbjct: 35092661 ctcccaaggaacatctccaacgagcatccagtcaccatccctgtc 35092705
>gb|AC074338.1|AC074338 Human Chromosome 7 clone RP11-81O10, complete sequence Length = 164192 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 141 ggacacatggtagggaacatcacataaca 169 ||||||| ||| ||||||||||||||||| Sbjct: 126913 ggacacagggtggggaacatcacataaca 126885
>dbj|AP002070.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0511C01 Length = 170402 Score = 42.1 bits (21), Expect = 1.7 Identities = 30/33 (90%) Strand = Plus / Minus Query: 447 ctcccatgggacgtctccaacaagcatccagtc 479 ||||||||||||||| ||||| | ||||||||| Sbjct: 19174 ctcccatgggacgtccccaaccatcatccagtc 19142
>gb|AC007312.1|AC007312 Homo sapiens clone RP11-349E11 from 7p14-15, complete sequence Length = 185652 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 141 ggacacatggtagggaacatcacataaca 169 ||||||| ||| ||||||||||||||||| Sbjct: 151825 ggacacagggtggggaacatcacataaca 151853
>dbj|AP005111.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0643F09 Length = 161001 Score = 42.1 bits (21), Expect = 1.7 Identities = 39/45 (86%) Strand = Plus / Plus Query: 447 ctcccatgggacgtctccaacaagcatccagtcgccatccttgtc 491 |||||| || || |||||||| ||||||||||| |||||| |||| Sbjct: 153002 ctcccaaggaacatctccaacgagcatccagtcaccatccctgtc 153046
>dbj|AP004028.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1136_C12 Length = 103973 Score = 42.1 bits (21), Expect = 1.7 Identities = 39/45 (86%) Strand = Plus / Plus Query: 447 ctcccatgggacgtctccaacaagcatccagtcgccatccttgtc 491 |||||| || || |||||||| ||||||||||| |||||| |||| Sbjct: 65824 ctcccaaggaacatctccaacgagcatccagtcaccatccctgtc 65868
>dbj|AK109363.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-206-E12, full insert sequence Length = 1220 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 463 ccaacaagcatccagtcgccatccttgtc 491 ||||||||||||||||| |||||||||| Sbjct: 814 ccaacaagcatccagtcagcatccttgtc 786
>emb|X68216.1|PSIAA45D P.sativum PS-IAA4/5 gene Length = 3976 Score = 42.1 bits (21), Expect = 1.7 Identities = 39/45 (86%) Strand = Plus / Minus Query: 447 ctcccatgggacgtctccaacaagcatccagtcgccatccttgtc 491 ||||||||| || |||||||| | |||||| || ||||||||||| Sbjct: 3275 ctcccatggaacatctccaactaacatccaatcaccatccttgtc 3231
>dbj|AK111128.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-176-C09, full insert sequence Length = 956 Score = 42.1 bits (21), Expect = 1.7 Identities = 36/41 (87%) Strand = Plus / Minus Query: 442 aacatctcccatgggacgtctccaacaagcatccagtcgcc 482 ||||||||||| || ||||| || || |||||||||||||| Sbjct: 415 aacatctcccagggcacgtcgccgacgagcatccagtcgcc 375
>dbj|AK106181.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-208-D03, full insert sequence Length = 1261 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 463 ccaacaagcatccagtcgccatccttgtc 491 ||||||||||||||||| |||||||||| Sbjct: 855 ccaacaagcatccagtcagcatccttgtc 827
>dbj|AK104018.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-007-H11, full insert sequence Length = 1221 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 463 ccaacaagcatccagtcgccatccttgtc 491 ||||||||||||||||| |||||||||| Sbjct: 808 ccaacaagcatccagtcagcatccttgtc 780
>dbj|AK099253.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013168H04, full insert sequence Length = 1209 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 463 ccaacaagcatccagtcgccatccttgtc 491 ||||||||||||||||| |||||||||| Sbjct: 803 ccaacaagcatccagtcagcatccttgtc 775
>dbj|AK061439.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-307-B11, full insert sequence Length = 1222 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 463 ccaacaagcatccagtcgccatccttgtc 491 ||||||||||||||||| |||||||||| Sbjct: 816 ccaacaagcatccagtcagcatccttgtc 788
>dbj|AP006256.1| Homo sapiens genomic DNA, chromosome 9, clone:RP11-433N8, complete sequence Length = 198664 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 4 aaaatagtgtgcttataattaacaa 28 ||||||||||||||||| ||||||| Sbjct: 172760 aaaatagtgtgcttatagttaacaa 172736
>emb|Z81098.1|CEK07A12 Caenorhabditis elegans Cosmid K07A12, complete sequence Length = 29106 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 46 ataccacaataataataatct 66 ||||||||||||||||||||| Sbjct: 10429 ataccacaataataataatct 10449
>emb|AL845296.4| Mouse DNA sequence from clone RP23-121B24 on chromosome 2, complete sequence Length = 203414 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 54 ataataataatctcatagatg 74 ||||||||||||||||||||| Sbjct: 123139 ataataataatctcatagatg 123159
>gb|M77195.1|RABAS1CG Oryctolagus cuniculus as1-casein gene, complete cds Length = 17684 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 256 ataattgaaaacattatatat 276 ||||||||||||||||||||| Sbjct: 4421 ataattgaaaacattatatat 4401
>ref|NM_179697.2| Arabidopsis thaliana IAA8; transcription factor AT2G22670 (IAA8) transcript variant AT2G22670.2 mRNA, complete cds Length = 1344 Score = 40.1 bits (20), Expect = 6.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 445 atctcccatgggacgtctccaacaagcatcca 476 ||||||||||| || || |||||||||||||| Sbjct: 1039 atctcccatggaacatcgccaacaagcatcca 1008
>ref|NM_127832.2| Arabidopsis thaliana IAA8; transcription factor AT2G22670 (IAA8) transcript variant AT2G22670.1 mRNA, complete cds Length = 1418 Score = 40.1 bits (20), Expect = 6.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 445 atctcccatgggacgtctccaacaagcatcca 476 ||||||||||| || || |||||||||||||| Sbjct: 1091 atctcccatggaacatcgccaacaagcatcca 1060
>ref|NM_119006.3| Arabidopsis thaliana IAA11; transcription factor AT4G28640 (IAA11) mRNA, complete cds Length = 1108 Score = 40.1 bits (20), Expect = 6.6 Identities = 50/60 (83%) Strand = Plus / Minus Query: 432 tgaagcaacaaacatctcccatgggacgtctccaacaagcatccagtcgccatccttgtc 491 |||| ||| ||||||| |||| || || || |||||||||||||| || || |||||||| Sbjct: 831 tgaaccaataaacatcccccacggaacatcgccaacaagcatccaatctccttccttgtc 772
>gb|AC169801.2| Rhesus Macaque BAC CH250-205G14 (Children's Hospital Oakland Research Institute Rhesus macaque Adult Male BAC Library) complete sequence Length = 168949 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 141 ggacacatggtagggaacatcaca 164 ||||||| |||||||||||||||| Sbjct: 56034 ggacacagggtagggaacatcaca 56057
>gb|AC170422.1| Rhesus Macaque BAC CH250-106F22 (Children's Hospital Oakland Research Institute Rhesus macaque Adult Male BAC Library) complete sequence Length = 185455 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 141 ggacacatggtagggaacatcaca 164 |||||||||| ||||||||||||| Sbjct: 63690 ggacacatggaagggaacatcaca 63667
>ref|XM_476878.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1164 Score = 40.1 bits (20), Expect = 6.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 395 tggcttcggaacccttcatgatcctcaa 422 ||||||| || ||||||||||||||||| Sbjct: 742 tggcttcagagcccttcatgatcctcaa 715
>gb|AC166340.4| Mus musculus chromosome 1, clone RP24-234I17, complete sequence Length = 172530 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 86 acaatcacacatacttaatt 105 |||||||||||||||||||| Sbjct: 89517 acaatcacacatacttaatt 89536
>gb|AC147460.1| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNAb0050G15, complete sequence Length = 126156 Score = 40.1 bits (20), Expect = 6.6 Identities = 32/36 (88%) Strand = Plus / Minus Query: 447 ctcccatgggacgtctccaacaagcatccagtcgcc 482 |||||||||||| || ||||||||||| | |||||| Sbjct: 113057 ctcccatgggacatcgccaacaagcattcggtcgcc 113022
>gb|AC146029.4| Pan troglodytes BAC clone RP43-124D5 from 7, complete sequence Length = 190776 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 141 ggacacatggtagggaacatcaca 164 ||||||||||| |||||||||||| Sbjct: 38375 ggacacatggtggggaacatcaca 38398
>gb|AC147087.3| Pan troglodytes BAC clone RP43-59E13 from 7, complete sequence Length = 130280 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 141 ggacacatggtagggaacatcaca 164 ||||||||||| |||||||||||| Sbjct: 51113 ggacacatggtggggaacatcaca 51136
>gb|AC004833.1| Homo sapiens PAC clone RP4-547C10 from 7, complete sequence Length = 68890 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 141 ggacacatggtagggaacatcaca 164 ||||||||||||||||||| |||| Sbjct: 34113 ggacacatggtagggaacaacaca 34136
>gb|AC133494.4| Mus musculus BAC clone RP24-443B5 from chromosome 7, complete sequence Length = 182616 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 128 caagtagattctgggacaca 147 |||||||||||||||||||| Sbjct: 91768 caagtagattctgggacaca 91787
>gb|AY506357.1| Homo sapiens truncated epidermal growth factor (beta-urogastrone) (EGF) gene, complete cds Length = 103052 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 141 ggacacatggtagggaacatcaca 164 |||||||||| ||||||||||||| Sbjct: 22467 ggacacatggaagggaacatcaca 22444
>emb|CT027662.1| Medicago truncatula chromosome 5 clone mth2-106e24, COMPLETE SEQUENCE Length = 89655 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 47 taccacaataataataatct 66 |||||||||||||||||||| Sbjct: 26269 taccacaataataataatct 26288
>gb|AC146095.3| Pan troglodytes BAC clone RP43-48M24 from 7, complete sequence Length = 190243 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 141 ggacacatggtagggaacatcaca 164 ||||||||||| |||||||||||| Sbjct: 155689 ggacacatggtggggaacatcaca 155712
>gb|AC099511.5| Homo sapiens chromosome 16 clone RP11-293N14, complete sequence Length = 173627 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 141 ggacacatggtagggaacatcaca 164 ||||||||||| |||||||||||| Sbjct: 43520 ggacacatggtggggaacatcaca 43543
>gb|AE014303.1| Homo sapiens chromosome 13q34 schizophrenia region contig 2 section 3 of 3 of the complete sequence Length = 209806 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 239 ttcttttaatccagctaata 258 |||||||||||||||||||| Sbjct: 204697 ttcttttaatccagctaata 204716
>gb|AC073348.8| Homo sapiens BAC clone RP11-786A20 from 7, complete sequence Length = 153997 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 141 ggacacatggtagggaacatcaca 164 ||||||||||| |||||||||||| Sbjct: 119514 ggacacatggtggggaacatcaca 119537
>gb|AC146114.3| Pan troglodytes BAC clone RP43-22O2 from 7, complete sequence Length = 176328 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 141 ggacacatggtagggaacatcaca 164 ||||||||||| |||||||||||| Sbjct: 26409 ggacacatggtggggaacatcaca 26432
>emb|BX663608.26| Zebrafish DNA sequence from clone DKEY-223I19 in linkage group 7, complete sequence Length = 190528 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 250 cagctaataattgaaaacat 269 |||||||||||||||||||| Sbjct: 120350 cagctaataattgaaaacat 120331
>emb|AL512629.7| Human DNA sequence from clone RP11-564N10 on chromosome 13 Contains the 5' end of the FGF14 gene for fibroblast growth factor 14, a lipoyltransferase (LOC51601) pseudogene and a CpG island, complete sequence Length = 188696 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 239 ttcttttaatccagctaata 258 |||||||||||||||||||| Sbjct: 55581 ttcttttaatccagctaata 55600
>emb|Z76735.1|HS246O8 Human DNA sequence from clone RP1-246O8 on chromosome X, complete sequence Length = 175745 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 141 ggacacatggtagggaacatcaca 164 ||||||| |||||||||||||||| Sbjct: 35049 ggacacagggtagggaacatcaca 35026
>emb|AL731532.8| Human DNA sequence from clone RP11-113E21 on chromosome 10 Contains the 3'end of a novel gene, complete sequence Length = 100443 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 141 ggacacatggtagggaacatcaca 164 ||||||||||| |||||||||||| Sbjct: 36447 ggacacatggtggggaacatcaca 36424
>emb|AL603649.9| Human DNA sequence from clone RP11-326N3 on chromosome 9 Contains part of the CRSP8 gene for subunit 8 of a cofactor required for Sp1 transcriptional activation and a CpG island, complete sequence Length = 77621 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 141 ggacacatggtagggaacatcaca 164 ||||||| |||||||||||||||| Sbjct: 60381 ggacacagggtagggaacatcaca 60404
>emb|AL589669.11| Human DNA sequence from clone RP11-226B15 on chromosome X, complete sequence Length = 165152 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 141 ggacacatggtagggaacatcaca 164 |||||||||| ||||||||||||| Sbjct: 94740 ggacacatggcagggaacatcaca 94763
>emb|AL590733.8| Human DNA sequence from clone RP11-193D23 on chromosome 6 Contains the 3' end of the FLJ14440 gene for thrombospondin, complete sequence Length = 135507 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 141 ggacacatggtagggaacatcaca 164 ||||||| |||||||||||||||| Sbjct: 130691 ggacacagggtagggaacatcaca 130714
>emb|AL513326.19| Human DNA sequence from clone RP11-134P9 on chromosome 1 Contains the 3' end of a novel gene, a novel gene, the BTG2 gene for BTG family, member 2 and a CpG island, complete sequence Length = 30325 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 141 ggacacatggtagggaacatcaca 164 ||||||| |||||||||||||||| Sbjct: 28455 ggacacagggtagggaacatcaca 28478
>emb|AL583863.16| Human DNA sequence from clone RP11-118G19 on chromosome 1, complete sequence Length = 113372 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 141 ggacacatggtagggaacatcaca 164 ||||||||||| |||||||||||| Sbjct: 94362 ggacacatggtggggaacatcaca 94339
>emb|AL445183.19| Human DNA sequence from clone RP11-334A14 on chromosome 1 Contains the 5' end of the SCP2 gene for sterol carrier protein 2, a pseudogene similar to part of related RAS viral (r-ras) oncogene homolog 2 (RRAS2), a beta polypeptide tubulin family pseudogene, the PODN gene for podocan, a likely ortholog of mouse hypoxia induced gene 1 (HIG1) pseudogene, two novel genes, the SLC1A7 gene for solute carrier family 1 (glutamate transporter) member 7 and a CpG island, complete sequence Length = 193774 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 141 ggacacatggtagggaacatcaca 164 ||||||||||| |||||||||||| Sbjct: 57203 ggacacatggtggggaacatcaca 57226
>emb|AL450320.4| Human DNA sequence from clone RP11-156I14 on chromosome 6 Contains the 5' end of the B3GAT2 gene for beta-1,3-glucuronyltransferase 2 (glucuronosyltransferase S) (GLCATS, KIAA1963) and a CpG island, complete sequence Length = 92019 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 141 ggacacatggtagggaacatcaca 164 ||||||||||| |||||||||||| Sbjct: 13270 ggacacatggtggggaacatcaca 13293
>emb|AL445246.4| Human DNA sequence from clone RP11-247H9 on chromosome X, complete sequence Length = 15078 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 141 ggacacatggtagggaacatcaca 164 ||||||| |||||||||||||||| Sbjct: 820 ggacacagggtagggaacatcaca 843
>emb|AL359837.21| Human DNA sequence from clone RP11-435P24 on chromosome 1 Contains the FMOD gene for fibromodulin, a small EDRK-rich factor 2 (SERF2) pseudogene and a CpG island, complete sequence Length = 128757 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 141 ggacacatggtagggaacatcaca 164 ||||||| |||||||||||||||| Sbjct: 130 ggacacagggtagggaacatcaca 153
>emb|AL390883.13| Human DNA sequence from clone RP11-230N22 on chromosome 9, complete sequence Length = 76353 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 141 ggacacatggtagggaacatcaca 164 ||||||||||| |||||||||||| Sbjct: 30719 ggacacatggtggggaacatcaca 30696
>emb|AL359197.20| Human DNA sequence from clone RP11-498I18 on chromosome 1, complete sequence Length = 191686 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 141 ggacacatggtagggaacatcaca 164 ||||||| |||||||||||||||| Sbjct: 98406 ggacacagggtagggaacatcaca 98429
>emb|AL359173.15| Human DNA sequence from clone RP11-769K12 on chromosome 6 Contains STSs and GSSs, complete sequence Length = 167904 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 141 ggacacatggtagggaacatcaca 164 ||||||| |||||||||||||||| Sbjct: 39269 ggacacagggtagggaacatcaca 39246
>emb|AL356294.28| Human DNA sequence from clone RP11-49F20 on chromosome 13 Contains a glycogenin (GYG) pseudogene, complete sequence Length = 135345 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 141 ggacacatggtagggaacatcaca 164 ||||||| |||||||||||||||| Sbjct: 49947 ggacacagggtagggaacatcaca 49924
>emb|AL356495.15| Human DNA sequence from clone RP11-206L1 on chromosome 13 Contains the 5' end of the TRPC4 gene for transient receptor potential cation channel, subfamily C, member 4, a heat shock 60kD protein 1 (chaperonin) (HSPD1) pseudogene and a CpG island, complete sequence Length = 173774 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 141 ggacacatggtagggaacatcaca 164 ||||||| |||||||||||||||| Sbjct: 47619 ggacacagggtagggaacatcaca 47642
>emb|AL356575.8| Human DNA sequence from clone RP11-340C20 on chromosome 13 Contains part of the PCCA gene for propionyl Coenzyme A carboxylase alpha polypeptide, and a ribosomal protein L15 (RPL15) pseudogene, complete sequence Length = 158527 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 141 ggacacatggtagggaacatcaca 164 ||||||| |||||||||||||||| Sbjct: 26126 ggacacagggtagggaacatcaca 26149
>emb|AL353779.11| Human DNA sequence from clone RP1-43O17 on chromosome 1 Contains the LEP7 gene for late envelope protein 7, two small proline rich-like (epidermal differentiation complex) 1B (SPRL1B) pseudogenes, the gene for a novel protein, the LEP6 gene for late envelope protein 6, the LEP5 gene for late envelope protein 5, the LEP4 gene for late envelope protein 4 and the LEP3 gene for late envelope protein 3, complete sequence Length = 96013 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 141 ggacacatggtagggaacatcaca 164 ||||||| |||||||||||||||| Sbjct: 9630 ggacacagggtagggaacatcaca 9607
>emb|AL354701.7| Human DNA sequence from clone RP11-785H23 on chromosome 9 Contains the 3' end of a novel gene, and a novel pseudogene, complete sequence Length = 131366 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 141 ggacacatggtagggaacatcaca 164 ||||||| |||||||||||||||| Sbjct: 8423 ggacacagggtagggaacatcaca 8400
>emb|AL161450.14| Human DNA sequence from clone RP11-39K24 on chromosome 9 Contains the 3' end of the JAK2 gene for Janus kinase 2 (a protein tyrosine kinase), a casein kinase pseudogene, a trans-prenyltransferase (TPT) pseudogene, a NADH dehydrogenase 6 (MTND6) pseuodgene, a NADH dehydrogenase 1 (MTND1) pseudogene, a cytochrome c oxidase I (MTCO1) pseudogene, a cytochrome c oxidase II (MTCO2) pseudogene, an ATP synthase 6 (MTATP6) pseudogene, a cytochrome c oxidase III (MTCO3) pseudogene, a NADH dehydrogenase 4 (MTND4)pseudogene, a pseudogene similar to part of NADH dehydrogenase 5 (MTND5), a transcription factor 3 (E2A immunoglobulin enhancer binding factors E12/E47) (TCF3) pseudogene, an immunoglobulin heavy constant epsilon pseudogene 2 (IGHEP2), a novel gene, the INSL6 gene for insulin-like 6 (RIF1) and 4 CpG islands, complete sequence Length = 171146 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 141 ggacacatggtagggaacatcaca 164 |||||||||| ||||||||||||| Sbjct: 88151 ggacacatggcagggaacatcaca 88174
>emb|AL160054.14| Human DNA sequence from clone RP11-8C21 on chromosome 9 Contains the 5' end of a novel gene (SHC3), a novel gene (HFSE-1), the CSK2 gene for CDC28 protein kinase regulatory subunit 2 (CKSHS2), the 5' end of the gene for SECIS binding protein 2 (SBP2) and three CpG islands, complete sequence Length = 206200 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 141 ggacacatggtagggaacatcaca 164 ||||||| |||||||||||||||| Sbjct: 190463 ggacacagggtagggaacatcaca 190440
>emb|AL162414.11| Human DNA sequence from clone RP11-202G18 on chromosome 9 Contains a novel gene, complete sequence Length = 176689 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 141 ggacacatggtagggaacatcaca 164 ||||||||||||||||||| |||| Sbjct: 96204 ggacacatggtagggaacaacaca 96227
>emb|AL157831.29| Human DNA sequence from clone RP11-108B14 on chromosome 10 Contains a ribosomal protein L29 (RPL29)(HIP,HUMRPL29) pseudogene, a CGI-45 protein (CGI-45) pseudogene, a novel pseudogene, a pseudogene similar to part of PSME2 (PA28B,REGbeta,PA28beta) (proteasome (prosome, macropain) activator subunit 2 (PA28 beta)) and a CpG island, complete sequence Length = 176577 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 141 ggacacatggtagggaacatcaca 164 ||||||| |||||||||||||||| Sbjct: 24848 ggacacagggtagggaacatcaca 24871
>gb|AC123524.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0052C03, complete sequence Length = 157178 Score = 40.1 bits (20), Expect = 6.6 Identities = 32/36 (88%) Strand = Plus / Minus Query: 447 ctcccatgggacgtctccaacaagcatccagtcgcc 482 |||||||||||| || ||||||||||| | |||||| Sbjct: 46901 ctcccatgggacatcgccaacaagcattcggtcgcc 46866
>gb|AC091134.7| Homo sapiens chromosome 17, clone RP11-646F1, complete sequence Length = 156583 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 141 ggacacatggtagggaacatcaca 164 ||||||| |||||||||||||||| Sbjct: 145743 ggacacagggtagggaacatcaca 145766
>emb|AL135786.17| Human DNA sequence from clone RP11-12D24 on chromosome 9p23-24.3 Contains the RLN1 gene for relaxin 1(H1) (RLXH1),the RLN2 gene for relaxin 2 (H2) (RLXH2), a high-mobility group nucleosomal binding domain 2 (HMGN2) pseudogene, a novel pseudogene, the gene for uncharacterized hematopoietic stem/progenitor cells protein (MDS030), a novel pseudogene (FLJ39176) and four CpG islands, complete sequence Length = 156592 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 141 ggacacatggtagggaacatcaca 164 ||||||||||| |||||||||||| Sbjct: 147537 ggacacatggtggggaacatcaca 147560
>gb|AC114982.2| Homo sapiens chromosome 5 clone RP11-95I19, complete sequence Length = 175079 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 141 ggacacatggtagggaacatcaca 164 ||||||||||| |||||||||||| Sbjct: 132511 ggacacatggtggggaacatcaca 132534
>emb|AL133382.8| Human DNA sequence from clone RP5-1156J9 on chromosome 1p12-13.2 Contains part of the gene for a novel protein (FLJ37099) and a novel gene, complete sequence Length = 81419 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 141 ggacacatggtagggaacatcaca 164 ||||||| |||||||||||||||| Sbjct: 16346 ggacacagggtagggaacatcaca 16369
>emb|AL079342.17|HSDJ72A23 Human DNA sequence from clone RP1-72A23 on chromosome 6 Contains an adaptor-related (clathrin-associated) protein complex 4, sigma 1 subunit (AP4A1) pseudogene, a novel pseudogene, the 5' end of the RNGTT gene for RNA guanylyltransferase and 5'-phosphatase (mRNA capping enzyme, CAP1A) and two CpG islands, complete sequence Length = 150541 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 141 ggacacatggtagggaacatcaca 164 ||||||| |||||||||||||||| Sbjct: 7028 ggacacagggtagggaacatcaca 7051
>emb|AL050305.9|HSDA60B16 Human DNA sequence from clone RP6-60B16 on chromosome Xp11.21-22.2 Contains the 5' end of one variant of the DMD gene for dystrophin (muscular dystrophy, Duchenne and Becker types), and a lysosomal-associated membrane protein 1 (LAMP1) pseudogene, complete sequence Length = 139258 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 141 ggacacatggtagggaacatcaca 164 ||||||| |||||||||||||||| Sbjct: 51152 ggacacagggtagggaacatcaca 51175
>gb|AC158769.2| Mus musculus chromosome 15, clone RP23-128J3, complete sequence Length = 199472 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 aatcacacatacttaattga 107 |||||||||||||||||||| Sbjct: 144414 aatcacacatacttaattga 144433
>emb|AL031665.19|HS545L17 Human DNA sequence from clone RP4-545L17 on chromosome 20p12.2-13 Contains the 5' end of the RAD21L1 gene for RAD21-like 1 (S. pombe), the C20orf46 gene, a novel gene, the PSMF1 gene for proteasome (prosome, macropain) inhibitor subunit 1 (PI31), the ACTGP3 gene for gamma actin pseudogene 3 and three CpG islands, complete sequence Length = 145437 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 141 ggacacatggtagggaacatcaca 164 ||||||| |||||||||||||||| Sbjct: 110426 ggacacagggtagggaacatcaca 110449
>emb|AL035494.8|HS635G19 Human DNA sequence from clone RP4-635G19 on chromosome Xq22.1-22.3 Contains a laminin receptor 1 (ribosomal protein SA, 67kDa)(LAMR1) pseudogene, a novel Brain expressed X-linked like family protein (FLJ10097) and a CpG island, complete sequence Length = 69648 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 141 ggacacatggtagggaacatcaca 164 ||||||||||| |||||||||||| Sbjct: 46865 ggacacatggtggggaacatcaca 46842
>emb|AL023280.1|HS455H14 Human DNA sequence from clone RP3-455H14 on chromosome Xq21.3-22.3 Contains a 5'-nucleotidase (cytosolic II-like 1) (NT5C2L1) pseudogene, complete sequence Length = 159387 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 141 ggacacatggtagggaacatcaca 164 ||||||| |||||||||||||||| Sbjct: 108831 ggacacagggtagggaacatcaca 108808
>gb|AC184714.1| Macaca mulatta clone CH250-396P23 map human ortholog 8p23.1, complete sequence Length = 174987 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 141 ggacacatggtagggaacatcaca 164 ||||||| |||||||||||||||| Sbjct: 42608 ggacacagggtagggaacatcaca 42585
>gb|AC184713.1| Macaca mulatta clone CH250-569D9 map human ortholog 8p23.1, complete sequence Length = 153308 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 141 ggacacatggtagggaacatcaca 164 ||||||| |||||||||||||||| Sbjct: 28041 ggacacagggtagggaacatcaca 28018
>gb|AC184712.1| Macaca mulatta clone CH250-14G4 map human ortholog 8p23.1, complete sequence Length = 190509 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 141 ggacacatggtagggaacatcaca 164 ||||||| |||||||||||||||| Sbjct: 60852 ggacacagggtagggaacatcaca 60829
>gb|AC184711.1| Macaca mulatta clone CH250-63N16 map human ortholog 8p23.1, complete sequence Length = 200536 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 141 ggacacatggtagggaacatcaca 164 ||||||| |||||||||||||||| Sbjct: 75358 ggacacagggtagggaacatcaca 75335
>gb|BT000261.1| Arabidopsis thaliana early auxin-inducible protein 11 (At4g28640) mRNA, complete cds Length = 887 Score = 40.1 bits (20), Expect = 6.6 Identities = 50/60 (83%) Strand = Plus / Minus Query: 432 tgaagcaacaaacatctcccatgggacgtctccaacaagcatccagtcgccatccttgtc 491 |||| ||| ||||||| |||| || || || |||||||||||||| || || |||||||| Sbjct: 678 tgaaccaataaacatcccccacggaacatcgccaacaagcatccaatctccttccttgtc 619
>gb|AF334714.1| Arabidopsis thaliana auxin-regulated protein IAA8 (At2g22670) mRNA, complete cds Length = 966 Score = 40.1 bits (20), Expect = 6.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 445 atctcccatgggacgtctccaacaagcatcca 476 ||||||||||| || || |||||||||||||| Sbjct: 863 atctcccatggaacatcgccaacaagcatcca 832
>gb|AY096452.1| Arabidopsis thaliana auxin-regulated protein IAA8 (At2g22670) mRNA, complete cds Length = 997 Score = 40.1 bits (20), Expect = 6.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 445 atctcccatgggacgtctccaacaagcatcca 476 ||||||||||| || || |||||||||||||| Sbjct: 863 atctcccatggaacatcgccaacaagcatcca 832
>gb|AY070399.1| Arabidopsis thaliana auxin-regulated protein IAA8 (At2g22670) mRNA, complete cds Length = 1315 Score = 40.1 bits (20), Expect = 6.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 445 atctcccatgggacgtctccaacaagcatcca 476 ||||||||||| || || |||||||||||||| Sbjct: 1039 atctcccatggaacatcgccaacaagcatcca 1008
>gb|AC183776.2| Pan troglodytes BAC clone CH251-246H3 from chromosome 7, complete sequence Length = 160056 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 141 ggacacatggtagggaacatcaca 164 ||||||||||| |||||||||||| Sbjct: 62172 ggacacatggtggggaacatcaca 62195
>emb|AJ627255.1| Oryza sativa (indica cultivar-group) partial mRNA for putative IAA20 transcriptional repressor (putative IAA20 gene) Length = 561 Score = 40.1 bits (20), Expect = 6.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 448 tcccatgggacgtctccaacaagcatccagtc 479 |||||||||||||| ||||| | ||||||||| Sbjct: 514 tcccatgggacgtccccaaccatcatccagtc 483 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,599,802 Number of Sequences: 3902068 Number of extensions: 6599802 Number of successful extensions: 142238 Number of sequences better than 10.0: 389 Number of HSP's better than 10.0 without gapping: 396 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 140805 Number of HSP's gapped (non-prelim): 1412 length of query: 491 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 469 effective length of database: 17,147,199,772 effective search space: 8042036693068 effective search space used: 8042036693068 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)