Clone Name | rbart24c12 |
---|---|
Clone Library Name | barley_pub |
>GPAT3_ARATH (Q9SYJ2) Probable glycerol-3-phosphate acyltransferase 3 (EC| 2.3.1.15) (AtGPAT3) Length = 520 Score = 98.2 bits (243), Expect = 8e-21 Identities = 53/110 (48%), Positives = 69/110 (62%) Frame = -2 Query: 434 PLFTELAAEVTPVALETRVDMFYGTSTKPASKVLDPLYFMMNPRPEYRVEFLEPVDTTTV 255 PLFTE++ + PVA+ V FYGT T K LDPL+F+++P P Y ++FL+PV T Sbjct: 413 PLFTEVSDVIVPVAVTVHVTFFYGT-TASGLKALDPLFFLLDPYPTYTIQFLDPVSGATC 471 Query: 254 ADGEEDGHDKSHSIHVANRVQRVLGEALAFELTGQTRKDKYMMLTGNEGI 105 D DG K VAN VQ +G+AL FE T TRKDKY++L GN G+ Sbjct: 472 QD--PDGKLK---FEVANNVQSDIGKALDFECTSLTRKDKYLILAGNNGV 516
>GPAT1_ARATH (Q9SHJ5) Glycerol-3-phosphate acyltransferase 1 (EC 2.3.1.15)| (AtGPAT1) Length = 585 Score = 96.3 bits (238), Expect = 3e-20 Identities = 51/110 (46%), Positives = 66/110 (60%) Frame = -2 Query: 434 PLFTELAAEVTPVALETRVDMFYGTSTKPASKVLDPLYFMMNPRPEYRVEFLEPVDTTTV 255 PLF EL ++ PVA++ RV MFYGT T K LDP++F+MNPRP Y +E L+ + Sbjct: 481 PLFAELTEDIVPVAVDARVSMFYGT-TASGLKCLDPIFFLMNPRPVYCLEILKKLPKEMT 539 Query: 254 ADGEEDGHDKSHSIHVANRVQRVLGEALAFELTGQTRKDKYMMLTGNEGI 105 G + S VAN +Q L L FE T TR+DKY++L GNEGI Sbjct: 540 CAGGKS------SFEVANFIQGELARVLGFECTNLTRRDKYLVLAGNEGI 583
>GPAT2_ARATH (Q9FZ22) Probable glycerol-3-phosphate acyltransferase 2 (EC| 2.3.1.15) (AtGPAT2) Length = 530 Score = 92.8 bits (229), Expect = 3e-19 Identities = 45/110 (40%), Positives = 67/110 (60%) Frame = -2 Query: 434 PLFTELAAEVTPVALETRVDMFYGTSTKPASKVLDPLYFMMNPRPEYRVEFLEPVDTTTV 255 PLF+E+ + PVA+++ V FYGT T K DP++F++NP P Y V+ L+PV ++ Sbjct: 418 PLFSEVCDVIVPVAIDSHVTFFYGT-TASGLKAFDPIFFLLNPFPSYTVKLLDPVSGSSS 476 Query: 254 ADGEEDGHDKSHSIHVANRVQRVLGEALAFELTGQTRKDKYMMLTGNEGI 105 + + + VAN VQ +G AL FE T TR+DKY++L GN G+ Sbjct: 477 STCRGVPDNGKVNFEVANHVQHEIGNALGFECTNLTRRDKYLILAGNNGV 526
>GPAT6_ARATH (O80437) Glycerol-3-phosphate acyltransferase 6 (EC 2.3.1.15)| (AtGPAT6) Length = 501 Score = 91.3 bits (225), Expect = 9e-19 Identities = 49/108 (45%), Positives = 62/108 (57%) Frame = -2 Query: 431 LFTELAAEVTPVALETRVDMFYGTSTKPASKVLDPLYFMMNPRPEYRVEFLEPVDTTTVA 252 LF EL + PVA+ T+ MF GT+T+ K+LDP + MNPRP Y + FL+ + Sbjct: 392 LFAELTDRIVPVAINTKQSMFNGTTTR-GYKLLDPYFAFMNPRPTYEITFLKQIPAELTC 450 Query: 251 DGEEDGHDKSHSIHVANRVQRVLGEALAFELTGQTRKDKYMMLTGNEG 108 G + I VAN +QRVLG L FE T TRKDKY ML G +G Sbjct: 451 KGGKS------PIEVANYIQRVLGGTLGFECTNFTRKDKYAMLAGTDG 492
>GPAT5_ARATH (Q9CAY3) Glycerol-3-phosphate acyltransferase 5 (EC 2.3.1.15)| (AtGPAT5) Length = 502 Score = 88.2 bits (217), Expect = 8e-18 Identities = 47/108 (43%), Positives = 60/108 (55%) Frame = -2 Query: 431 LFTELAAEVTPVALETRVDMFYGTSTKPASKVLDPLYFMMNPRPEYRVEFLEPVDTTTVA 252 LF EL + PVA+ RV F+ T+ + K LDP++F MNPRP Y + FL + Sbjct: 379 LFAELTDRIVPVAMNYRVGFFHATTAR-GWKGLDPIFFFMNPRPVYEITFLNQLPMEATC 437 Query: 251 DGEEDGHDKSHSIHVANRVQRVLGEALAFELTGQTRKDKYMMLTGNEG 108 + HD VAN VQR+L L FE T TRKDKY +L GN+G Sbjct: 438 SSGKSPHD------VANYVQRILAATLGFECTNFTRKDKYRVLAGNDG 479
>GPAT7_ARATH (Q9LHS7) Putative glycerol-3-phosphate acyltransferase 7 (EC| 2.3.1.15) (AtGPAT7) Length = 500 Score = 87.8 bits (216), Expect = 1e-17 Identities = 47/108 (43%), Positives = 61/108 (56%) Frame = -2 Query: 431 LFTELAAEVTPVALETRVDMFYGTSTKPASKVLDPLYFMMNPRPEYRVEFLEPVDTTTVA 252 LF EL + PVA+ RV F+ T+ + K LDP++F MNPRP Y V FL ++ Sbjct: 377 LFAELTDNIVPVAMNYRVGFFHATTAR-GWKGLDPIFFFMNPRPVYEVTFLNQLEVEATC 435 Query: 251 DGEEDGHDKSHSIHVANRVQRVLGEALAFELTGQTRKDKYMMLTGNEG 108 + +D VAN VQR+L L FE T TRKDKY +L GN+G Sbjct: 436 SSGKSPYD------VANYVQRILAATLGFECTNFTRKDKYRVLAGNDG 477
>GPAT8_ARATH (Q5XF03) Probable glycerol-3-phosphate acyltransferase 8 (EC| 2.3.1.15) Length = 500 Score = 85.1 bits (209), Expect = 7e-17 Identities = 48/110 (43%), Positives = 63/110 (57%), Gaps = 2/110 (1%) Frame = -2 Query: 431 LFTELAAEVTPVALETRVDMFYGTSTKPASKVLDPLYFMMNPRPEYRVEFLE--PVDTTT 258 LF EL+ + PVA+ + MF GT+ + K DP +F MNPRP Y FL+ P + T Sbjct: 389 LFAELSDRIVPVAMNCKQGMFNGTTVRGV-KFWDPYFFFMNPRPSYEATFLDRLPEEMTV 447 Query: 257 VADGEEDGHDKSHSIHVANRVQRVLGEALAFELTGQTRKDKYMMLTGNEG 108 G+ I VAN VQ+V+G L FE T TRKDKY++L GN+G Sbjct: 448 NGGGKTP-------IEVANYVQKVIGAVLGFECTELTRKDKYLLLGGNDG 490
>GPAT4_ARATH (Q9LMM0) Glycerol-3-phosphate acyltransferase 4 (EC 2.3.1.15)| (AtGPAT4) Length = 503 Score = 83.2 bits (204), Expect = 3e-16 Identities = 47/110 (42%), Positives = 62/110 (56%), Gaps = 2/110 (1%) Frame = -2 Query: 431 LFTELAAEVTPVALETRVDMFYGTSTKPASKVLDPLYFMMNPRPEYRVEFLE--PVDTTT 258 LF EL+ + PVA+ + MF GT+ + K DP +F MNPRP Y FL+ P + T Sbjct: 390 LFAELSDRIVPVAMNCKQGMFNGTTVRGV-KFWDPYFFFMNPRPSYEATFLDRLPEEMTV 448 Query: 257 VADGEEDGHDKSHSIHVANRVQRVLGEALAFELTGQTRKDKYMMLTGNEG 108 G+ VAN VQ+V+G L FE T TRKDKY++L GN+G Sbjct: 449 NGGGKTP-------FEVANYVQKVIGGVLGFECTELTRKDKYLLLGGNDG 491
>P53_BOVIN (P67939) Cellular tumor antigen p53 (Tumor suppressor p53)| Length = 386 Score = 30.8 bits (68), Expect = 1.5 Identities = 17/59 (28%), Positives = 28/59 (47%), Gaps = 4/59 (6%) Frame = -2 Query: 362 TSTKPASKVLDPLYFMMNPRPEYRVEFL----EPVDTTTVADGEEDGHDKSHSIHVANR 198 +S +P K LD YF + R R E + ++ DG E G ++HS H+ ++ Sbjct: 307 SSPQPKKKPLDGEYFTLQIRGFKRYEMFRELNDALELKDALDGREPGESRAHSSHLKSK 365
>P53_BOSIN (P67938) Cellular tumor antigen p53 (Tumor suppressor p53)| Length = 386 Score = 30.8 bits (68), Expect = 1.5 Identities = 17/59 (28%), Positives = 28/59 (47%), Gaps = 4/59 (6%) Frame = -2 Query: 362 TSTKPASKVLDPLYFMMNPRPEYRVEFL----EPVDTTTVADGEEDGHDKSHSIHVANR 198 +S +P K LD YF + R R E + ++ DG E G ++HS H+ ++ Sbjct: 307 SSPQPKKKPLDGEYFTLQIRGFKRYEMFRELNDALELKDALDGREPGESRAHSSHLKSK 365
>P53_HUMAN (P04637) Cellular tumor antigen p53 (Tumor suppressor p53)| (Phosphoprotein p53) (Antigen NY-CO-13) Length = 393 Score = 30.0 bits (66), Expect = 2.5 Identities = 19/75 (25%), Positives = 34/75 (45%), Gaps = 4/75 (5%) Frame = -2 Query: 410 EVTPVALETRVDMFYGTSTKPASKVLDPLYFMMNPRPEYRVEFL----EPVDTTTVADGE 243 E+ P + + + +S +P K LD YF + R R E E ++ G+ Sbjct: 298 ELPPGSTKRALPNNTSSSPQPKKKPLDGEYFTLQIRGRERFEMFRELNEALELKDAQAGK 357 Query: 242 EDGHDKSHSIHVANR 198 E G ++HS H+ ++ Sbjct: 358 EPGGSRAHSSHLKSK 372
>RPC2_DROME (P25167) DNA-directed RNA polymerase III 128 kDa polypeptide (EC| 2.7.7.6) (RNA polymerase III subunit 2) Length = 1137 Score = 29.6 bits (65), Expect = 3.3 Identities = 13/28 (46%), Positives = 16/28 (57%) Frame = +3 Query: 336 HFGRRLGGRAVEHVDARLERDGGNLGGE 419 H+G GG VE + A LER G N G+ Sbjct: 965 HYGTAFGGSKVEDIQAELERHGFNYVGK 992
>P53_DELLE (Q8SPZ3) Cellular tumor antigen p53 (Tumor suppressor p53)| Length = 387 Score = 29.6 bits (65), Expect = 3.3 Identities = 19/62 (30%), Positives = 29/62 (46%), Gaps = 6/62 (9%) Frame = -2 Query: 365 GTSTKPASKV--LDPLYFMMNPRPEYRVEFL----EPVDTTTVADGEEDGHDKSHSIHVA 204 GTS+ P K LD YF + R R E E ++ G+E G ++HS H+ Sbjct: 305 GTSSSPPQKKKPLDGEYFTLQIRGRERFEMFRELNEALELKDAQAGKEPGESRAHSSHLK 364 Query: 203 NR 198 ++ Sbjct: 365 SK 366
>GPB2_YEAST (P39717) Guanine nucleotide-binding protein beta subunit GPB2| (Gbeta mimic kelch protein) Length = 880 Score = 28.1 bits (61), Expect = 9.7 Identities = 15/44 (34%), Positives = 23/44 (52%) Frame = -2 Query: 338 VLDPLYFMMNPRPEYRVEFLEPVDTTTVADGEEDGHDKSHSIHV 207 VLD ++ M + E P++T AD EDG +K S++V Sbjct: 703 VLDDMWLM-----DLECETWTPIETFAKADSSEDGDEKLDSVNV 741 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 41,566,156 Number of Sequences: 219361 Number of extensions: 665526 Number of successful extensions: 2461 Number of sequences better than 10.0: 14 Number of HSP's better than 10.0 without gapping: 2397 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2443 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2511994855 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)