ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart24c12
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1GPAT3_ARATH (Q9SYJ2) Probable glycerol-3-phosphate acyltransfera... 98 8e-21
2GPAT1_ARATH (Q9SHJ5) Glycerol-3-phosphate acyltransferase 1 (EC ... 96 3e-20
3GPAT2_ARATH (Q9FZ22) Probable glycerol-3-phosphate acyltransfera... 93 3e-19
4GPAT6_ARATH (O80437) Glycerol-3-phosphate acyltransferase 6 (EC ... 91 9e-19
5GPAT5_ARATH (Q9CAY3) Glycerol-3-phosphate acyltransferase 5 (EC ... 88 8e-18
6GPAT7_ARATH (Q9LHS7) Putative glycerol-3-phosphate acyltransfera... 88 1e-17
7GPAT8_ARATH (Q5XF03) Probable glycerol-3-phosphate acyltransfera... 85 7e-17
8GPAT4_ARATH (Q9LMM0) Glycerol-3-phosphate acyltransferase 4 (EC ... 83 3e-16
9P53_BOVIN (P67939) Cellular tumor antigen p53 (Tumor suppressor ... 31 1.5
10P53_BOSIN (P67938) Cellular tumor antigen p53 (Tumor suppressor ... 31 1.5
11P53_HUMAN (P04637) Cellular tumor antigen p53 (Tumor suppressor ... 30 2.5
12RPC2_DROME (P25167) DNA-directed RNA polymerase III 128 kDa poly... 30 3.3
13P53_DELLE (Q8SPZ3) Cellular tumor antigen p53 (Tumor suppressor ... 30 3.3
14GPB2_YEAST (P39717) Guanine nucleotide-binding protein beta subu... 28 9.7

>GPAT3_ARATH (Q9SYJ2) Probable glycerol-3-phosphate acyltransferase 3 (EC|
           2.3.1.15) (AtGPAT3)
          Length = 520

 Score = 98.2 bits (243), Expect = 8e-21
 Identities = 53/110 (48%), Positives = 69/110 (62%)
 Frame = -2

Query: 434 PLFTELAAEVTPVALETRVDMFYGTSTKPASKVLDPLYFMMNPRPEYRVEFLEPVDTTTV 255
           PLFTE++  + PVA+   V  FYGT T    K LDPL+F+++P P Y ++FL+PV   T 
Sbjct: 413 PLFTEVSDVIVPVAVTVHVTFFYGT-TASGLKALDPLFFLLDPYPTYTIQFLDPVSGATC 471

Query: 254 ADGEEDGHDKSHSIHVANRVQRVLGEALAFELTGQTRKDKYMMLTGNEGI 105
            D   DG  K     VAN VQ  +G+AL FE T  TRKDKY++L GN G+
Sbjct: 472 QD--PDGKLK---FEVANNVQSDIGKALDFECTSLTRKDKYLILAGNNGV 516



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>GPAT1_ARATH (Q9SHJ5) Glycerol-3-phosphate acyltransferase 1 (EC 2.3.1.15)|
           (AtGPAT1)
          Length = 585

 Score = 96.3 bits (238), Expect = 3e-20
 Identities = 51/110 (46%), Positives = 66/110 (60%)
 Frame = -2

Query: 434 PLFTELAAEVTPVALETRVDMFYGTSTKPASKVLDPLYFMMNPRPEYRVEFLEPVDTTTV 255
           PLF EL  ++ PVA++ RV MFYGT T    K LDP++F+MNPRP Y +E L+ +     
Sbjct: 481 PLFAELTEDIVPVAVDARVSMFYGT-TASGLKCLDPIFFLMNPRPVYCLEILKKLPKEMT 539

Query: 254 ADGEEDGHDKSHSIHVANRVQRVLGEALAFELTGQTRKDKYMMLTGNEGI 105
             G +       S  VAN +Q  L   L FE T  TR+DKY++L GNEGI
Sbjct: 540 CAGGKS------SFEVANFIQGELARVLGFECTNLTRRDKYLVLAGNEGI 583



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>GPAT2_ARATH (Q9FZ22) Probable glycerol-3-phosphate acyltransferase 2 (EC|
           2.3.1.15) (AtGPAT2)
          Length = 530

 Score = 92.8 bits (229), Expect = 3e-19
 Identities = 45/110 (40%), Positives = 67/110 (60%)
 Frame = -2

Query: 434 PLFTELAAEVTPVALETRVDMFYGTSTKPASKVLDPLYFMMNPRPEYRVEFLEPVDTTTV 255
           PLF+E+   + PVA+++ V  FYGT T    K  DP++F++NP P Y V+ L+PV  ++ 
Sbjct: 418 PLFSEVCDVIVPVAIDSHVTFFYGT-TASGLKAFDPIFFLLNPFPSYTVKLLDPVSGSSS 476

Query: 254 ADGEEDGHDKSHSIHVANRVQRVLGEALAFELTGQTRKDKYMMLTGNEGI 105
           +       +   +  VAN VQ  +G AL FE T  TR+DKY++L GN G+
Sbjct: 477 STCRGVPDNGKVNFEVANHVQHEIGNALGFECTNLTRRDKYLILAGNNGV 526



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>GPAT6_ARATH (O80437) Glycerol-3-phosphate acyltransferase 6 (EC 2.3.1.15)|
           (AtGPAT6)
          Length = 501

 Score = 91.3 bits (225), Expect = 9e-19
 Identities = 49/108 (45%), Positives = 62/108 (57%)
 Frame = -2

Query: 431 LFTELAAEVTPVALETRVDMFYGTSTKPASKVLDPLYFMMNPRPEYRVEFLEPVDTTTVA 252
           LF EL   + PVA+ T+  MF GT+T+   K+LDP +  MNPRP Y + FL+ +      
Sbjct: 392 LFAELTDRIVPVAINTKQSMFNGTTTR-GYKLLDPYFAFMNPRPTYEITFLKQIPAELTC 450

Query: 251 DGEEDGHDKSHSIHVANRVQRVLGEALAFELTGQTRKDKYMMLTGNEG 108
            G +        I VAN +QRVLG  L FE T  TRKDKY ML G +G
Sbjct: 451 KGGKS------PIEVANYIQRVLGGTLGFECTNFTRKDKYAMLAGTDG 492



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>GPAT5_ARATH (Q9CAY3) Glycerol-3-phosphate acyltransferase 5 (EC 2.3.1.15)|
           (AtGPAT5)
          Length = 502

 Score = 88.2 bits (217), Expect = 8e-18
 Identities = 47/108 (43%), Positives = 60/108 (55%)
 Frame = -2

Query: 431 LFTELAAEVTPVALETRVDMFYGTSTKPASKVLDPLYFMMNPRPEYRVEFLEPVDTTTVA 252
           LF EL   + PVA+  RV  F+ T+ +   K LDP++F MNPRP Y + FL  +      
Sbjct: 379 LFAELTDRIVPVAMNYRVGFFHATTAR-GWKGLDPIFFFMNPRPVYEITFLNQLPMEATC 437

Query: 251 DGEEDGHDKSHSIHVANRVQRVLGEALAFELTGQTRKDKYMMLTGNEG 108
              +  HD      VAN VQR+L   L FE T  TRKDKY +L GN+G
Sbjct: 438 SSGKSPHD------VANYVQRILAATLGFECTNFTRKDKYRVLAGNDG 479



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>GPAT7_ARATH (Q9LHS7) Putative glycerol-3-phosphate acyltransferase 7 (EC|
           2.3.1.15) (AtGPAT7)
          Length = 500

 Score = 87.8 bits (216), Expect = 1e-17
 Identities = 47/108 (43%), Positives = 61/108 (56%)
 Frame = -2

Query: 431 LFTELAAEVTPVALETRVDMFYGTSTKPASKVLDPLYFMMNPRPEYRVEFLEPVDTTTVA 252
           LF EL   + PVA+  RV  F+ T+ +   K LDP++F MNPRP Y V FL  ++     
Sbjct: 377 LFAELTDNIVPVAMNYRVGFFHATTAR-GWKGLDPIFFFMNPRPVYEVTFLNQLEVEATC 435

Query: 251 DGEEDGHDKSHSIHVANRVQRVLGEALAFELTGQTRKDKYMMLTGNEG 108
              +  +D      VAN VQR+L   L FE T  TRKDKY +L GN+G
Sbjct: 436 SSGKSPYD------VANYVQRILAATLGFECTNFTRKDKYRVLAGNDG 477



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>GPAT8_ARATH (Q5XF03) Probable glycerol-3-phosphate acyltransferase 8 (EC|
           2.3.1.15)
          Length = 500

 Score = 85.1 bits (209), Expect = 7e-17
 Identities = 48/110 (43%), Positives = 63/110 (57%), Gaps = 2/110 (1%)
 Frame = -2

Query: 431 LFTELAAEVTPVALETRVDMFYGTSTKPASKVLDPLYFMMNPRPEYRVEFLE--PVDTTT 258
           LF EL+  + PVA+  +  MF GT+ +   K  DP +F MNPRP Y   FL+  P + T 
Sbjct: 389 LFAELSDRIVPVAMNCKQGMFNGTTVRGV-KFWDPYFFFMNPRPSYEATFLDRLPEEMTV 447

Query: 257 VADGEEDGHDKSHSIHVANRVQRVLGEALAFELTGQTRKDKYMMLTGNEG 108
              G+         I VAN VQ+V+G  L FE T  TRKDKY++L GN+G
Sbjct: 448 NGGGKTP-------IEVANYVQKVIGAVLGFECTELTRKDKYLLLGGNDG 490



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>GPAT4_ARATH (Q9LMM0) Glycerol-3-phosphate acyltransferase 4 (EC 2.3.1.15)|
           (AtGPAT4)
          Length = 503

 Score = 83.2 bits (204), Expect = 3e-16
 Identities = 47/110 (42%), Positives = 62/110 (56%), Gaps = 2/110 (1%)
 Frame = -2

Query: 431 LFTELAAEVTPVALETRVDMFYGTSTKPASKVLDPLYFMMNPRPEYRVEFLE--PVDTTT 258
           LF EL+  + PVA+  +  MF GT+ +   K  DP +F MNPRP Y   FL+  P + T 
Sbjct: 390 LFAELSDRIVPVAMNCKQGMFNGTTVRGV-KFWDPYFFFMNPRPSYEATFLDRLPEEMTV 448

Query: 257 VADGEEDGHDKSHSIHVANRVQRVLGEALAFELTGQTRKDKYMMLTGNEG 108
              G+           VAN VQ+V+G  L FE T  TRKDKY++L GN+G
Sbjct: 449 NGGGKTP-------FEVANYVQKVIGGVLGFECTELTRKDKYLLLGGNDG 491



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>P53_BOVIN (P67939) Cellular tumor antigen p53 (Tumor suppressor p53)|
          Length = 386

 Score = 30.8 bits (68), Expect = 1.5
 Identities = 17/59 (28%), Positives = 28/59 (47%), Gaps = 4/59 (6%)
 Frame = -2

Query: 362 TSTKPASKVLDPLYFMMNPRPEYRVEFL----EPVDTTTVADGEEDGHDKSHSIHVANR 198
           +S +P  K LD  YF +  R   R E      + ++     DG E G  ++HS H+ ++
Sbjct: 307 SSPQPKKKPLDGEYFTLQIRGFKRYEMFRELNDALELKDALDGREPGESRAHSSHLKSK 365



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>P53_BOSIN (P67938) Cellular tumor antigen p53 (Tumor suppressor p53)|
          Length = 386

 Score = 30.8 bits (68), Expect = 1.5
 Identities = 17/59 (28%), Positives = 28/59 (47%), Gaps = 4/59 (6%)
 Frame = -2

Query: 362 TSTKPASKVLDPLYFMMNPRPEYRVEFL----EPVDTTTVADGEEDGHDKSHSIHVANR 198
           +S +P  K LD  YF +  R   R E      + ++     DG E G  ++HS H+ ++
Sbjct: 307 SSPQPKKKPLDGEYFTLQIRGFKRYEMFRELNDALELKDALDGREPGESRAHSSHLKSK 365



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>P53_HUMAN (P04637) Cellular tumor antigen p53 (Tumor suppressor p53)|
           (Phosphoprotein p53) (Antigen NY-CO-13)
          Length = 393

 Score = 30.0 bits (66), Expect = 2.5
 Identities = 19/75 (25%), Positives = 34/75 (45%), Gaps = 4/75 (5%)
 Frame = -2

Query: 410 EVTPVALETRVDMFYGTSTKPASKVLDPLYFMMNPRPEYRVEFL----EPVDTTTVADGE 243
           E+ P + +  +     +S +P  K LD  YF +  R   R E      E ++      G+
Sbjct: 298 ELPPGSTKRALPNNTSSSPQPKKKPLDGEYFTLQIRGRERFEMFRELNEALELKDAQAGK 357

Query: 242 EDGHDKSHSIHVANR 198
           E G  ++HS H+ ++
Sbjct: 358 EPGGSRAHSSHLKSK 372



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>RPC2_DROME (P25167) DNA-directed RNA polymerase III 128 kDa polypeptide (EC|
            2.7.7.6) (RNA polymerase III subunit 2)
          Length = 1137

 Score = 29.6 bits (65), Expect = 3.3
 Identities = 13/28 (46%), Positives = 16/28 (57%)
 Frame = +3

Query: 336  HFGRRLGGRAVEHVDARLERDGGNLGGE 419
            H+G   GG  VE + A LER G N  G+
Sbjct: 965  HYGTAFGGSKVEDIQAELERHGFNYVGK 992



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>P53_DELLE (Q8SPZ3) Cellular tumor antigen p53 (Tumor suppressor p53)|
          Length = 387

 Score = 29.6 bits (65), Expect = 3.3
 Identities = 19/62 (30%), Positives = 29/62 (46%), Gaps = 6/62 (9%)
 Frame = -2

Query: 365 GTSTKPASKV--LDPLYFMMNPRPEYRVEFL----EPVDTTTVADGEEDGHDKSHSIHVA 204
           GTS+ P  K   LD  YF +  R   R E      E ++      G+E G  ++HS H+ 
Sbjct: 305 GTSSSPPQKKKPLDGEYFTLQIRGRERFEMFRELNEALELKDAQAGKEPGESRAHSSHLK 364

Query: 203 NR 198
           ++
Sbjct: 365 SK 366



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>GPB2_YEAST (P39717) Guanine nucleotide-binding protein beta subunit GPB2|
           (Gbeta mimic kelch protein)
          Length = 880

 Score = 28.1 bits (61), Expect = 9.7
 Identities = 15/44 (34%), Positives = 23/44 (52%)
 Frame = -2

Query: 338 VLDPLYFMMNPRPEYRVEFLEPVDTTTVADGEEDGHDKSHSIHV 207
           VLD ++ M     +   E   P++T   AD  EDG +K  S++V
Sbjct: 703 VLDDMWLM-----DLECETWTPIETFAKADSSEDGDEKLDSVNV 741


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 41,566,156
Number of Sequences: 219361
Number of extensions: 665526
Number of successful extensions: 2461
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 2397
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2443
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2511994855
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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