Clone Name | rbart24c11 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | LYS4_ENTHI (Q27650) Lysozyme (EC 3.2.1.17) (1,4-beta-N-acetylmur... | 32 | 0.31 | 2 | YD73_SCHPO (Q10328) Putative homeobox protein C32A11.03c in chro... | 29 | 3.5 | 3 | WNT8A_HUMAN (Q9H1J5) Protein Wnt-8a precursor (Wnt-8d) | 28 | 4.5 |
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>LYS4_ENTHI (Q27650) Lysozyme (EC 3.2.1.17) (1,4-beta-N-acetylmuramidase)| Length = 198 Score = 32.3 bits (72), Expect = 0.31 Identities = 13/22 (59%), Positives = 16/22 (72%) Frame = +2 Query: 14 TYNYRHRSSTPIIYPHKTTSTS 79 +Y YR+RSSTP+ YPH S S Sbjct: 142 SYKYRYRSSTPLWYPHYDNSPS 163
>YD73_SCHPO (Q10328) Putative homeobox protein C32A11.03c in chromosome I| Length = 942 Score = 28.9 bits (63), Expect = 3.5 Identities = 10/18 (55%), Positives = 13/18 (72%) Frame = +2 Query: 131 YYCCTLFMVGFWKRTRWS 184 Y+ CTL ++G WKR R S Sbjct: 438 YFSCTLLVIGLWKRLRAS 455
>WNT8A_HUMAN (Q9H1J5) Protein Wnt-8a precursor (Wnt-8d)| Length = 355 Score = 28.5 bits (62), Expect = 4.5 Identities = 11/25 (44%), Positives = 16/25 (64%) Frame = -1 Query: 103 CSC*GTDNGCTCCFMWIYNGCTRSV 29 C C G++NG T WI+ GC+ +V Sbjct: 112 CGCDGSNNGKTGGHGWIWGGCSDNV 136 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 38,046,617 Number of Sequences: 219361 Number of extensions: 673198 Number of successful extensions: 2133 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 2066 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2132 length of database: 80,573,946 effective HSP length: 76 effective length of database: 63,902,510 effective search space used: 1533660240 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)