ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart24c09
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_185146.1| Oryza sativa (japonica cultivar-group), mRNA 194 2e-46
2gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 194 2e-46
3dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 194 2e-46
4gb|AC093018.4| Oryza sativa chromosome 3 BAC OSJNBb0081B07 genom... 194 2e-46
5gb|AC091247.4| Oryza sativa chromosome 3 BAC OJ1111_B11 genomic ... 151 2e-33
6ref|XM_477223.1| Oryza sativa (japonica cultivar-group), mRNA 64 4e-07
7dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 64 4e-07
8dbj|AP004382.2| Oryza sativa (japonica cultivar-group) genomic D... 64 4e-07
9dbj|AK064151.1| Oryza sativa (japonica cultivar-group) cDNA clon... 64 4e-07
10ref|NM_186788.1| Oryza sativa (japonica cultivar-group), mRNA 60 7e-06
11dbj|AP004340.5| Oryza sativa (japonica cultivar-group) genomic D... 60 7e-06
12gb|AC154531.2| Mus musculus BAC clone RP23-468B10 from chromosom... 46 0.100
13emb|BX897686.8| Zebrafish DNA sequence from clone DKEY-145M5 in ... 44 0.39
14emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromos... 44 0.39
15emb|BX511308.11| Zebrafish DNA sequence from clone DKEYP-118E10 ... 44 0.39
16dbj|AP003754.5| Oryza sativa (japonica cultivar-group) genomic D... 44 0.39
17ref|XM_466409.1| Oryza sativa (japonica cultivar-group), mRNA 42 1.6
18ref|XM_466410.1| Oryza sativa (japonica cultivar-group), mRNA 42 1.6
19ref|XM_478280.1| Oryza sativa (japonica cultivar-group), mRNA 42 1.6
20gb|AC154885.8| Mus musculus chromosome 5, clone RP24-333I1, comp... 42 1.6
21gb|AC122228.4| Mus musculus BAC clone RP23-131N12 from chromosom... 42 1.6
22gb|AY349011.1| Burkholderia cepacia phage Bcep22, complete genome 42 1.6
23gb|AF527808.1| Sorghum bicolor clone BAC SBTXS_0040L6 php200725 ... 42 1.6
24emb|BX065728.1|CNS09MVO Single read from an extremity of a full-... 42 1.6
25emb|BX065727.1|CNS09MVN Single read from an extremity of a full-... 42 1.6
26emb|BX064860.1|CNS09M7K Single read from an extremity of a full-... 42 1.6
27emb|BX064859.1|CNS09M7J Single read from an extremity of a full-... 42 1.6
28emb|BX053686.1|CNS09DL6 Single read from an extremity of a full-... 42 1.6
29emb|BX053685.1|CNS09DL5 Single read from an extremity of a full-... 42 1.6
30emb|BX050489.1|CNS09B4D Single read from an extremity of a full-... 42 1.6
31emb|BX050488.1|CNS09B4C Single read from an extremity of a full-... 42 1.6
32emb|BX043258.1|CNS095JI Single read from an extremity of a full-... 42 1.6
33emb|BX043257.1|CNS095JH Single read from an extremity of a full-... 42 1.6
34emb|BX041639.1|CNS094AJ Single read from an extremity of a full-... 42 1.6
35emb|BX040052.1|CNS0932G Single read from an extremity of a full-... 42 1.6
36emb|BX040051.1|CNS0932F Single read from an extremity of a full-... 42 1.6
37emb|BX031551.1|CNS08WIB Single read from an extremity of a full-... 42 1.6
38emb|BX031550.1|CNS08WIA Single read from an extremity of a full-... 42 1.6
39emb|BX029553.1|CNS08UYT Single read from an extremity of a full-... 42 1.6
40emb|BX029552.1|CNS08UYS Single read from an extremity of a full-... 42 1.6
41emb|BX023477.1|CNS08QA1 Single read from an extremity of a full-... 42 1.6
42emb|BX023476.1|CNS08QA0 Single read from an extremity of a full-... 42 1.6
43emb|BX023131.1|CNS08Q0F Single read from an extremity of a full-... 42 1.6
44gb|AY036067.1| Burkholderia cepacia strain G4 RuvB (ruvB) gene, ... 42 1.6
45gb|AC157352.2| Mus musculus BAC clone RP24-483A21 from chromosom... 42 1.6
46gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete g... 42 1.6
47dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
48dbj|AP006070.2| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
49dbj|AP005186.4| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
50ref|XM_310833.2| Anopheles gambiae str. PEST ENSANGP00000012490 ... 42 1.6
51dbj|AK067710.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.6
52dbj|AK064085.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.6
53dbj|AK059016.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.6
54emb|AL355176.10| Mouse DNA sequence from clone RP21-505L19 on ch... 42 1.6
55gb|AC154279.2| Mus musculus BAC clone RP24-271E12 from chromosom... 40 6.1
56gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, comp... 40 6.1
57gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, com... 40 6.1
58gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete... 40 6.1
59gb|AC146500.2| Danio rerio clone CH211-130P22, complete sequence 40 6.1
60emb|CR392003.9| Zebrafish DNA sequence from clone DKEY-242N9 in ... 40 6.1
61gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome 40 6.1
62emb|BX640445.1| Bordetella bronchiseptica strain RB50, complete ... 40 6.1
63emb|BX640427.1| Bordetella parapertussis strain 12822, complete ... 40 6.1
64emb|BX640415.1| Bordetella pertussis strain Tohama I, complete g... 40 6.1
65gb|AF494454.1| Gluconacetobacter diazotrophicus NifR3-like prote... 40 6.1
66gb|AC092749.1| Genomic sequence for Oryza sativa (japonica culti... 40 6.1
67gb|AF457462.1| Myxococcus xanthus putative oxidoreductase, matri... 40 6.1
68dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.1
69dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 40 6.1
70emb|AL928788.3| Mouse DNA sequence from clone RP24-294K11 on chr... 40 6.1
71emb|BX571790.8| Zebrafish DNA sequence from clone CH211-199M3 in... 40 6.1
72gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete ge... 40 6.1
73gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 40 6.1
74emb|AL808137.4| Mouse DNA sequence from clone RP23-358G23 on chr... 40 6.1
75emb|AL833777.11| Mouse DNA sequence from clone RP23-150D10 on ch... 40 6.1
76gb|AC163629.5| Mus musculus BAC clone RP24-542G7 from chromosome... 40 6.1 
>ref|NM_185146.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1413

 Score =  194 bits (98), Expect = 2e-46
 Identities = 244/292 (83%), Gaps = 3/292 (1%)
 Strand = Plus / Minus

                                                                        
Query: 164  ccgacgagccggcctcgccggtgcactccttcgccgccttcttcagctcgccggccctgg 223
            ||||||||||||||| |||||||||||||  ||||||||||||||||||||  ||||  |
Sbjct: 1369 ccgacgagccggccttgccggtgcactccgccgccgccttcttcagctcgcgcgcccgcg 1310

                                                                        
Query: 224  cccgcatctccgctccctcgctccccgtgacgagccgccggatggccttctccacgtcta 283
            ||| ||||||  | || |||||| |||  | ||||||||||||||||| ||||||  |  
Sbjct: 1309 ccctcatctcgccgccgtcgctctccgccatgagccgccggatggcctcctccaccgccc 1250

                                                                        
Query: 284  acctctcgagcgcgccggcgacc---tcaaagcccaccttccacacgtgctccacgtacc 340
             |||||||||| ||||| |||||   || || ||  ||||||||||||||||||||||||
Sbjct: 1249 ccctctcgagctcgccgccgaccacctcgaacccggccttccacacgtgctccacgtacc 1190

                                                                        
Query: 341  tggcgttccccatctggtcgccgaagtgcgggcggcaaagcatcggcaccccctcgcaca 400
            | ||||||||||||||||||||||||   || ||||| ||||||||||||||||||   |
Sbjct: 1189 tcgcgttccccatctggtcgccgaagcttggccggcacagcatcggcaccccctcggcga 1130

                                                                
Query: 401  cgctctccgttgtcgagttccaacccccgtgcgtccagaacccggccacggc 452
             ||||||||| ||||||||||| ||   ||| |||||||||||| |||||||
Sbjct: 1129 ggctctccgtcgtcgagttccacccgttgtgagtccagaacccgcccacggc 1078
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  194 bits (98), Expect = 2e-46
 Identities = 244/292 (83%), Gaps = 3/292 (1%)
 Strand = Plus / Minus

                                                                            
Query: 164      ccgacgagccggcctcgccggtgcactccttcgccgccttcttcagctcgccggccctgg 223
                ||||||||||||||| |||||||||||||  ||||||||||||||||||||  ||||  |
Sbjct: 34334509 ccgacgagccggccttgccggtgcactccgccgccgccttcttcagctcgcgcgcccgcg 34334450

                                                                            
Query: 224      cccgcatctccgctccctcgctccccgtgacgagccgccggatggccttctccacgtcta 283
                ||| ||||||  | || |||||| |||  | ||||||||||||||||| ||||||  |  
Sbjct: 34334449 ccctcatctcgccgccgtcgctctccgccatgagccgccggatggcctcctccaccgccc 34334390

                                                                            
Query: 284      acctctcgagcgcgccggcgacc---tcaaagcccaccttccacacgtgctccacgtacc 340
                 |||||||||| ||||| |||||   || || ||  ||||||||||||||||||||||||
Sbjct: 34334389 ccctctcgagctcgccgccgaccacctcgaacccggccttccacacgtgctccacgtacc 34334330

                                                                            
Query: 341      tggcgttccccatctggtcgccgaagtgcgggcggcaaagcatcggcaccccctcgcaca 400
                | ||||||||||||||||||||||||   || ||||| ||||||||||||||||||   |
Sbjct: 34334329 tcgcgttccccatctggtcgccgaagcttggccggcacagcatcggcaccccctcggcga 34334270

                                                                    
Query: 401      cgctctccgttgtcgagttccaacccccgtgcgtccagaacccggccacggc 452
                 ||||||||| ||||||||||| ||   ||| |||||||||||| |||||||
Sbjct: 34334269 ggctctccgtcgtcgagttccacccgttgtgagtccagaacccgcccacggc 34334218
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  194 bits (98), Expect = 2e-46
 Identities = 244/292 (83%), Gaps = 3/292 (1%)
 Strand = Plus / Minus

                                                                            
Query: 164      ccgacgagccggcctcgccggtgcactccttcgccgccttcttcagctcgccggccctgg 223
                ||||||||||||||| |||||||||||||  ||||||||||||||||||||  ||||  |
Sbjct: 34424981 ccgacgagccggccttgccggtgcactccgccgccgccttcttcagctcgcgcgcccgcg 34424922

                                                                            
Query: 224      cccgcatctccgctccctcgctccccgtgacgagccgccggatggccttctccacgtcta 283
                ||| ||||||  | || |||||| |||  | ||||||||||||||||| ||||||  |  
Sbjct: 34424921 ccctcatctcgccgccgtcgctctccgccatgagccgccggatggcctcctccaccgccc 34424862

                                                                            
Query: 284      acctctcgagcgcgccggcgacc---tcaaagcccaccttccacacgtgctccacgtacc 340
                 |||||||||| ||||| |||||   || || ||  ||||||||||||||||||||||||
Sbjct: 34424861 ccctctcgagctcgccgccgaccacctcgaacccggccttccacacgtgctccacgtacc 34424802

                                                                            
Query: 341      tggcgttccccatctggtcgccgaagtgcgggcggcaaagcatcggcaccccctcgcaca 400
                | ||||||||||||||||||||||||   || ||||| ||||||||||||||||||   |
Sbjct: 34424801 tcgcgttccccatctggtcgccgaagcttggccggcacagcatcggcaccccctcggcga 34424742

                                                                    
Query: 401      cgctctccgttgtcgagttccaacccccgtgcgtccagaacccggccacggc 452
                 ||||||||| ||||||||||| ||   ||| |||||||||||| |||||||
Sbjct: 34424741 ggctctccgtcgtcgagttccacccgttgtgagtccagaacccgcccacggc 34424690
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>gb|AC093018.4| Oryza sativa chromosome 3 BAC OSJNBb0081B07 genomic sequence,
           complete sequence
          Length = 143205

 Score =  194 bits (98), Expect = 2e-46
 Identities = 244/292 (83%), Gaps = 3/292 (1%)
 Strand = Plus / Plus

                                                                       
Query: 164 ccgacgagccggcctcgccggtgcactccttcgccgccttcttcagctcgccggccctgg 223
           ||||||||||||||| |||||||||||||  ||||||||||||||||||||  ||||  |
Sbjct: 489 ccgacgagccggccttgccggtgcactccgccgccgccttcttcagctcgcgcgcccgcg 548

                                                                       
Query: 224 cccgcatctccgctccctcgctccccgtgacgagccgccggatggccttctccacgtcta 283
           ||| ||||||  | || |||||| |||  | ||||||||||||||||| ||||||  |  
Sbjct: 549 ccctcatctcgccgccgtcgctctccgccatgagccgccggatggcctcctccaccgccc 608

                                                                       
Query: 284 acctctcgagcgcgccggcgacc---tcaaagcccaccttccacacgtgctccacgtacc 340
            |||||||||| ||||| |||||   || || ||  ||||||||||||||||||||||||
Sbjct: 609 ccctctcgagctcgccgccgaccacctcgaacccggccttccacacgtgctccacgtacc 668

                                                                       
Query: 341 tggcgttccccatctggtcgccgaagtgcgggcggcaaagcatcggcaccccctcgcaca 400
           | ||||||||||||||||||||||||   || ||||| ||||||||||||||||||   |
Sbjct: 669 tcgcgttccccatctggtcgccgaagcttggccggcacagcatcggcaccccctcggcga 728

                                                               
Query: 401 cgctctccgttgtcgagttccaacccccgtgcgtccagaacccggccacggc 452
            ||||||||| ||||||||||| ||   ||| |||||||||||| |||||||
Sbjct: 729 ggctctccgtcgtcgagttccacccgttgtgagtccagaacccgcccacggc 780
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>gb|AC091247.4| Oryza sativa chromosome 3 BAC OJ1111_B11 genomic sequence, complete
              sequence
          Length = 115393

 Score =  151 bits (76), Expect = 2e-33
 Identities = 174/206 (84%), Gaps = 3/206 (1%)
 Strand = Plus / Plus

                                                                          
Query: 164    ccgacgagccggcctcgccggtgcactccttcgccgccttcttcagctcgccggccctgg 223
              ||||||||||||||| |||||||||||||  ||||||||||||||||||||  ||||  |
Sbjct: 115185 ccgacgagccggccttgccggtgcactccgccgccgccttcttcagctcgcgcgcccgcg 115244

                                                                          
Query: 224    cccgcatctccgctccctcgctccccgtgacgagccgccggatggccttctccacgtcta 283
              ||| ||||||  | || |||||| |||  | ||||||||||||||||| ||||||  |  
Sbjct: 115245 ccctcatctcgccgccgtcgctctccgccatgagccgccggatggcctcctccaccgccc 115304

                                                                          
Query: 284    acctctcgagcgcgccggcg---acctcaaagcccaccttccacacgtgctccacgtacc 340
               |||||||||| ||||| ||   ||||| || ||  ||||||||||||||||||||||||
Sbjct: 115305 ccctctcgagctcgccgccgaccacctcgaacccggccttccacacgtgctccacgtacc 115364

                                        
Query: 341    tggcgttccccatctggtcgccgaag 366
              | ||||||||||||||||||||||||
Sbjct: 115365 tcgcgttccccatctggtcgccgaag 115390
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>ref|XM_477223.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1648

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 92/112 (82%)
 Strand = Plus / Minus

                                                                        
Query: 333  cacgtacctggcgttccccatctggtcgccgaagtgcgggcggcaaagcatcggcacccc 392
            ||||||||| |||||| || |||||||| |||||  ||| ||    ||||| ||||||||
Sbjct: 1252 cacgtacctcgcgttcaccgtctggtcggcgaagcacggccgcgcgagcatgggcacccc 1193

                                                                
Query: 393  ctcgcacacgctctccgttgtcgagttccaacccccgtgcgtccagaacccg 444
            ||| || |||||||||   ||||||||||| || | ||||||||||||||||
Sbjct: 1192 ctcacagacgctctccagcgtcgagttccacccgcagtgcgtccagaacccg 1141
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 92/112 (82%)
 Strand = Plus / Minus

                                                                           
Query: 333     cacgtacctggcgttccccatctggtcgccgaagtgcgggcggcaaagcatcggcacccc 392
               ||||||||| |||||| || |||||||| |||||  ||| ||    ||||| ||||||||
Sbjct: 7945454 cacgtacctcgcgttcaccgtctggtcggcgaagcacggccgcgcgagcatgggcacccc 7945395

                                                                   
Query: 393     ctcgcacacgctctccgttgtcgagttccaacccccgtgcgtccagaacccg 444
               ||| || |||||||||   ||||||||||| || | ||||||||||||||||
Sbjct: 7945394 ctcacagacgctctccagcgtcgagttccacccgcagtgcgtccagaacccg 7945343



 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 102/126 (80%)
 Strand = Plus / Minus

                                                                           
Query: 321     ccacacgtgctccacgtacctggcgttccccatctggtcgccgaagtgcgggcggcaaag 380
               ||||||| ||||| ||||||| ||||| |||  |||||||||||||   || |||   ||
Sbjct: 7872227 ccacacgcgctccgcgtacctcgcgttgcccggctggtcgccgaagcatggccggagcag 7872168

                                                                           
Query: 381     catcggcaccccctcgcacacgctctccgttgtcgagttccaacccccgtgcgtccagaa 440
               ||||||||| ||  |||| |||||||||   ||||||||||| || | ||||||||||||
Sbjct: 7872167 catcggcacgccggcgcagacgctctccagcgtcgagttccagccgcagtgcgtccagaa 7872108

                     
Query: 441     cccggc 446
               | ||||
Sbjct: 7872107 cgcggc 7872102



 Score = 44.1 bits (22), Expect = 0.39
 Identities = 55/66 (83%)
 Strand = Plus / Plus

                                                                           
Query: 379     agcatcggcaccccctcgcacacgctctccgttgtcgagttccaacccccgtgcgtccag 438
               ||||| |||||||| ||||| | ||| |||   ||||||||||| || | ||||||||||
Sbjct: 8001352 agcatgggcaccccttcgcagatgctatccagcgtcgagttccacccgcagtgcgtccag 8001411

                     
Query: 439     aacccg 444
               ||||||
Sbjct: 8001412 aacccg 8001417



 Score = 44.1 bits (22), Expect = 0.39
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                                 
Query: 333     cacgtacctggcgttccccatctggtcgccgaag 366
               ||||||||| |||||| || ||||||||||||||
Sbjct: 8001306 cacgtacctcgcgttcaccgtctggtcgccgaag 8001339



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                         
Query: 412      gtcgagttccaacccccgtgcgtccagaacccggccacggc 452
                ||||||||||| || |||||||||  ||||||| |||||||
Sbjct: 18993401 gtcgagttccacccgccgtgcgtcacgaacccgcccacggc 18993361
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>dbj|AP004382.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0418E08
          Length = 141040

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 92/112 (82%)
 Strand = Plus / Minus

                                                                         
Query: 333   cacgtacctggcgttccccatctggtcgccgaagtgcgggcggcaaagcatcggcacccc 392
             ||||||||| |||||| || |||||||| |||||  ||| ||    ||||| ||||||||
Sbjct: 61813 cacgtacctcgcgttcaccgtctggtcggcgaagcacggccgcgcgagcatgggcacccc 61754

                                                                 
Query: 393   ctcgcacacgctctccgttgtcgagttccaacccccgtgcgtccagaacccg 444
             ||| || |||||||||   ||||||||||| || | ||||||||||||||||
Sbjct: 61753 ctcacagacgctctccagcgtcgagttccacccgcagtgcgtccagaacccg 61702



 Score = 44.1 bits (22), Expect = 0.39
 Identities = 55/66 (83%)
 Strand = Plus / Plus

                                                                          
Query: 379    agcatcggcaccccctcgcacacgctctccgttgtcgagttccaacccccgtgcgtccag 438
              ||||| |||||||| ||||| | ||| |||   ||||||||||| || | ||||||||||
Sbjct: 117711 agcatgggcaccccttcgcagatgctatccagcgtcgagttccacccgcagtgcgtccag 117770

                    
Query: 439    aacccg 444
              ||||||
Sbjct: 117771 aacccg 117776



 Score = 44.1 bits (22), Expect = 0.39
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                                
Query: 333    cacgtacctggcgttccccatctggtcgccgaag 366
              ||||||||| |||||| || ||||||||||||||
Sbjct: 117665 cacgtacctcgcgttcaccgtctggtcgccgaag 117698
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>dbj|AK064151.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-103-E05, full
            insert sequence
          Length = 1648

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 92/112 (82%)
 Strand = Plus / Minus

                                                                        
Query: 333  cacgtacctggcgttccccatctggtcgccgaagtgcgggcggcaaagcatcggcacccc 392
            ||||||||| |||||| || |||||||| |||||  ||| ||    ||||| ||||||||
Sbjct: 1252 cacgtacctcgcgttcaccgtctggtcggcgaagcacggccgcgcgagcatgggcacccc 1193

                                                                
Query: 393  ctcgcacacgctctccgttgtcgagttccaacccccgtgcgtccagaacccg 444
            ||| || |||||||||   ||||||||||| || | ||||||||||||||||
Sbjct: 1192 ctcacagacgctctccagcgtcgagttccacccgcagtgcgtccagaacccg 1141
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>ref|NM_186788.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1440

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 102/126 (80%)
 Strand = Plus / Minus

                                                                        
Query: 321  ccacacgtgctccacgtacctggcgttccccatctggtcgccgaagtgcgggcggcaaag 380
            ||||||| ||||| ||||||| ||||| |||  |||||||||||||   || |||   ||
Sbjct: 1230 ccacacgcgctccgcgtacctcgcgttgcccggctggtcgccgaagcatggccggagcag 1171

                                                                        
Query: 381  catcggcaccccctcgcacacgctctccgttgtcgagttccaacccccgtgcgtccagaa 440
            ||||||||| ||  |||| |||||||||   ||||||||||| || | ||||||||||||
Sbjct: 1170 catcggcacgccggcgcagacgctctccagcgtcgagttccagccgcagtgcgtccagaa 1111

                  
Query: 441  cccggc 446
            | ||||
Sbjct: 1110 cgcggc 1105
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>dbj|AP004340.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0523A04
          Length = 149049

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 102/126 (80%)
 Strand = Plus / Minus

                                                                          
Query: 321    ccacacgtgctccacgtacctggcgttccccatctggtcgccgaagtgcgggcggcaaag 380
              ||||||| ||||| ||||||| ||||| |||  |||||||||||||   || |||   ||
Sbjct: 121225 ccacacgcgctccgcgtacctcgcgttgcccggctggtcgccgaagcatggccggagcag 121166

                                                                          
Query: 381    catcggcaccccctcgcacacgctctccgttgtcgagttccaacccccgtgcgtccagaa 440
              ||||||||| ||  |||| |||||||||   ||||||||||| || | ||||||||||||
Sbjct: 121165 catcggcacgccggcgcagacgctctccagcgtcgagttccagccgcagtgcgtccagaa 121106

                    
Query: 441    cccggc 446
              | ||||
Sbjct: 121105 cgcggc 121100
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>gb|AC154531.2| Mus musculus BAC clone RP23-468B10 from chromosome 14, complete sequence
          Length = 180565

 Score = 46.1 bits (23), Expect = 0.100
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 303    gacctcaaagcccaccttccaca 325
              |||||||||||||||||||||||
Sbjct: 123728 gacctcaaagcccaccttccaca 123706
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>emb|BX897686.8| Zebrafish DNA sequence from clone DKEY-145M5 in linkage group 15,
             complete sequence
          Length = 115533

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 32    cagagattctgaactgacaccgttga 57
             |||||||||||||||||||| |||||
Sbjct: 90187 cagagattctgaactgacactgttga 90212
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>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence
          Length = 4074542

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 368     gcgggcggcaaagcatcggcac 389
               ||||||||||||||||||||||
Sbjct: 2523389 gcgggcggcaaagcatcggcac 2523368
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>emb|BX511308.11| Zebrafish DNA sequence from clone DKEYP-118E10 in linkage group 15,
             complete sequence
          Length = 123109

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 32    cagagattctgaactgacaccgttga 57
             |||||||||||||||||||| |||||
Sbjct: 59966 cagagattctgaactgacactgttga 59941
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>dbj|AP003754.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1341_A08
          Length = 128955

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 55/66 (83%)
 Strand = Plus / Plus

                                                                         
Query: 379   agcatcggcaccccctcgcacacgctctccgttgtcgagttccaacccccgtgcgtccag 438
             ||||| |||||||| ||||| | ||| |||   ||||||||||| || | ||||||||||
Sbjct: 39549 agcatgggcaccccttcgcagatgctatccagcgtcgagttccacccgcagtgcgtccag 39608

                   
Query: 439   aacccg 444
             ||||||
Sbjct: 39609 aacccg 39614



 Score = 44.1 bits (22), Expect = 0.39
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                               
Query: 333   cacgtacctggcgttccccatctggtcgccgaag 366
             ||||||||| |||||| || ||||||||||||||
Sbjct: 39503 cacgtacctcgcgttcaccgtctggtcgccgaag 39536
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>ref|XM_466409.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1464

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 48/57 (84%)
 Strand = Plus / Minus

                                                                     
Query: 379  agcatcggcaccccctcgcacacgctctccgttgtcgagttccaacccccgtgcgtc 435
            ||||||||||||||  |||  | ||||||| | |||||||||||||| | |||||||
Sbjct: 1190 agcatcggcaccccggcgctgaggctctccatcgtcgagttccaaccgcagtgcgtc 1134
to top
>ref|XM_466410.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1506

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 48/57 (84%)
 Strand = Plus / Plus

                                                                    
Query: 379 agcatcggcaccccctcgcacacgctctccgttgtcgagttccaacccccgtgcgtc 435
           ||||||||||||||  |||  | ||||||| | |||||||||||||| | |||||||
Sbjct: 171 agcatcggcaccccggcgctgaggctctccatcgtcgagttccaaccgcagtgcgtc 227
to top
>ref|XM_478280.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1501

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                     
Query: 412  gtcgagttccaacccccgtgcgtccagaacccggccacggc 452
            ||||||||||| || |||||||||  ||||||| |||||||
Sbjct: 1150 gtcgagttccacccgccgtgcgtcacgaacccgcccacggc 1110
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>gb|AC154885.8| Mus musculus chromosome 5, clone RP24-333I1, complete sequence
          Length = 176471

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 303   gacctcaaagcccaccttcca 323
             |||||||||||||||||||||
Sbjct: 75087 gacctcaaagcccaccttcca 75107
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>gb|AC122228.4| Mus musculus BAC clone RP23-131N12 from chromosome 12, complete sequence
          Length = 202970

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 303    gacctcaaagcccaccttcca 323
              |||||||||||||||||||||
Sbjct: 191768 gacctcaaagcccaccttcca 191748
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>gb|AY349011.1| Burkholderia cepacia phage Bcep22, complete genome
          Length = 63882

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                         
Query: 191  ccttcgccgccttcttcagctcgccggcc 219
            ||||||||||||||||  |||||||||||
Sbjct: 6300 ccttcgccgccttcttgcgctcgccggcc 6328
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>gb|AF527808.1| Sorghum bicolor clone BAC SBTXS_0040L6 php200725 orthologous region
          Length = 90923

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 151   ccgatggcgaggcccgacgag 171
             |||||||||||||||||||||
Sbjct: 43023 ccgatggcgaggcccgacgag 43003
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>emb|BX065728.1|CNS09MVO Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 3-PRIME end of
           clone FK0AAC49CH11 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 901

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 196 gccgccttcttcagctcgccg 216
           |||||||||||||||||||||
Sbjct: 541 gccgccttcttcagctcgccg 561
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>emb|BX065727.1|CNS09MVN Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 5-PRIME end of
           clone FK0AAC49CH11 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 756

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 196 gccgccttcttcagctcgccg 216
           |||||||||||||||||||||
Sbjct: 699 gccgccttcttcagctcgccg 679
to top
>emb|BX064860.1|CNS09M7K Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 3-PRIME end of
           clone FK0AAC48CA08 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 946

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 196 gccgccttcttcagctcgccg 216
           |||||||||||||||||||||
Sbjct: 540 gccgccttcttcagctcgccg 560
to top
>emb|BX064859.1|CNS09M7J Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 5-PRIME end of
           clone FK0AAC48CA08 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 972

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 196 gccgccttcttcagctcgccg 216
           |||||||||||||||||||||
Sbjct: 695 gccgccttcttcagctcgccg 675
to top
>emb|BX053686.1|CNS09DL6 Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 3-PRIME end of
           clone FK0AAC31CA11 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 951

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 196 gccgccttcttcagctcgccg 216
           |||||||||||||||||||||
Sbjct: 572 gccgccttcttcagctcgccg 592
to top
>emb|BX053685.1|CNS09DL5 Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 5-PRIME end of
           clone FK0AAC31CA11 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 909

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 196 gccgccttcttcagctcgccg 216
           |||||||||||||||||||||
Sbjct: 640 gccgccttcttcagctcgccg 620
to top
>emb|BX050489.1|CNS09B4D Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 3-PRIME end of
           clone FK0AAC27AA11 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 664

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 196 gccgccttcttcagctcgccg 216
           |||||||||||||||||||||
Sbjct: 495 gccgccttcttcagctcgccg 515
to top
>emb|BX050488.1|CNS09B4C Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 5-PRIME end of
           clone FK0AAC27AA11 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 411

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 196 gccgccttcttcagctcgccg 216
           |||||||||||||||||||||
Sbjct: 407 gccgccttcttcagctcgccg 387
to top
>emb|BX043258.1|CNS095JI Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 3-PRIME end of
           clone FK0AAC15DA07 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 932

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 196 gccgccttcttcagctcgccg 216
           |||||||||||||||||||||
Sbjct: 554 gccgccttcttcagctcgccg 574
to top
>emb|BX043257.1|CNS095JH Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 5-PRIME end of
           clone FK0AAC15DA07 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 923

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 196 gccgccttcttcagctcgccg 216
           |||||||||||||||||||||
Sbjct: 696 gccgccttcttcagctcgccg 676
to top
>emb|BX041639.1|CNS094AJ Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 3-PRIME end of
           clone FK0AAC13AG08 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 680

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 196 gccgccttcttcagctcgccg 216
           |||||||||||||||||||||
Sbjct: 507 gccgccttcttcagctcgccg 527
to top
>emb|BX040052.1|CNS0932G Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 3-PRIME end of
           clone FK0AAC10CE10 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 965

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 196 gccgccttcttcagctcgccg 216
           |||||||||||||||||||||
Sbjct: 544 gccgccttcttcagctcgccg 564
to top
>emb|BX040051.1|CNS0932F Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 5-PRIME end of
           clone FK0AAC10CE10 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 911

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 196 gccgccttcttcagctcgccg 216
           |||||||||||||||||||||
Sbjct: 699 gccgccttcttcagctcgccg 679
to top
>emb|BX031551.1|CNS08WIB Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 3-PRIME end of
           clone FK0AAA47AB08 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 900

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 196 gccgccttcttcagctcgccg 216
           |||||||||||||||||||||
Sbjct: 561 gccgccttcttcagctcgccg 581
to top
>emb|BX031550.1|CNS08WIA Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 5-PRIME end of
           clone FK0AAA47AB08 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 1010

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 196 gccgccttcttcagctcgccg 216
           |||||||||||||||||||||
Sbjct: 699 gccgccttcttcagctcgccg 679
to top
>emb|BX029553.1|CNS08UYT Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 3-PRIME end of
           clone FK0AAA44AF12 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 876

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 196 gccgccttcttcagctcgccg 216
           |||||||||||||||||||||
Sbjct: 543 gccgccttcttcagctcgccg 563
to top
>emb|BX029552.1|CNS08UYS Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 5-PRIME end of
           clone FK0AAA44AF12 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 809

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 196 gccgccttcttcagctcgccg 216
           |||||||||||||||||||||
Sbjct: 702 gccgccttcttcagctcgccg 682
to top
>emb|BX023477.1|CNS08QA1 Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 3-PRIME end of
           clone FK0AAA35DE09 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 869

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 196 gccgccttcttcagctcgccg 216
           |||||||||||||||||||||
Sbjct: 570 gccgccttcttcagctcgccg 590
to top
>emb|BX023476.1|CNS08QA0 Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 5-PRIME end of
           clone FK0AAA35DE09 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 915

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 196 gccgccttcttcagctcgccg 216
           |||||||||||||||||||||
Sbjct: 708 gccgccttcttcagctcgccg 688
to top
>emb|BX023131.1|CNS08Q0F Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 3-PRIME end of
           clone FK0AAA35BE05 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 862

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 196 gccgccttcttcagctcgccg 216
           |||||||||||||||||||||
Sbjct: 543 gccgccttcttcagctcgccg 563
to top
>gb|AY036067.1| Burkholderia cepacia strain G4 RuvB (ruvB) gene, complete cds
          Length = 1443

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 288 ctcgagcgcgccggcgacctc 308
           |||||||||||||||||||||
Sbjct: 392 ctcgagcgcgccggcgacctc 412
to top
>gb|AC157352.2| Mus musculus BAC clone RP24-483A21 from chromosome 12, complete
             sequence
          Length = 131417

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 303   gacctcaaagcccaccttcca 323
             |||||||||||||||||||||
Sbjct: 25964 gacctcaaagcccaccttcca 25944
to top
>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome
          Length = 2909809

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 288     ctcgagcgcgccggcgacctc 308
               |||||||||||||||||||||
Sbjct: 2290413 ctcgagcgcgccggcgacctc 2290393
to top
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 48/57 (84%)
 Strand = Plus / Minus

                                                                         
Query: 379      agcatcggcaccccctcgcacacgctctccgttgtcgagttccaacccccgtgcgtc 435
                ||||||||||||||  |||  | ||||||| | |||||||||||||| | |||||||
Sbjct: 22235952 agcatcggcaccccggcgctgaggctctccatcgtcgagttccaaccgcagtgcgtc 22235896
to top
>dbj|AP006070.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:B1342F01
          Length = 153287

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 48/57 (84%)
 Strand = Plus / Minus

                                                                       
Query: 379    agcatcggcaccccctcgcacacgctctccgttgtcgagttccaacccccgtgcgtc 435
              ||||||||||||||  |||  | ||||||| | |||||||||||||| | |||||||
Sbjct: 131796 agcatcggcaccccggcgctgaggctctccatcgtcgagttccaaccgcagtgcgtc 131740
to top
>dbj|AP005186.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0430F03
          Length = 183095

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                      
Query: 412   gtcgagttccaacccccgtgcgtccagaacccggccacggc 452
             ||||||||||| || |||||||||  ||||||| |||||||
Sbjct: 95386 gtcgagttccacccgccgtgcgtcacgaacccgcccacggc 95346
to top
>ref|XM_310833.2| Anopheles gambiae str. PEST ENSANGP00000012490
           (ENSANGG00000010001), partial mRNA
          Length = 1023

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 196 gccgccttcttcagctcgccg 216
           |||||||||||||||||||||
Sbjct: 713 gccgccttcttcagctcgccg 693
to top
>dbj|AK067710.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013120G17, full
            insert sequence
          Length = 2031

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                     
Query: 412  gtcgagttccaacccccgtgcgtccagaacccggccacggc 452
            ||||||||||| || |||||||||  ||||||| |||||||
Sbjct: 1074 gtcgagttccacccgccgtgcgtcacgaacccgcccacggc 1034
to top
>dbj|AK064085.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-100-B11, full
           insert sequence
          Length = 1505

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 48/57 (84%)
 Strand = Plus / Plus

                                                                    
Query: 379 agcatcggcaccccctcgcacacgctctccgttgtcgagttccaacccccgtgcgtc 435
           ||||||||||||||  |||  | ||||||| | |||||||||||||| | |||||||
Sbjct: 171 agcatcggcaccccggcgctgaggctctccatcgtcgagttccaaccgcagtgcgtc 227
to top
>dbj|AK059016.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-021-A10, full
            insert sequence
          Length = 1501

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                     
Query: 412  gtcgagttccaacccccgtgcgtccagaacccggccacggc 452
            ||||||||||| || |||||||||  ||||||| |||||||
Sbjct: 1150 gtcgagttccacccgccgtgcgtcacgaacccgcccacggc 1110
to top
>emb|AL355176.10| Mouse DNA sequence from clone RP21-505L19 on chromosome 5, complete
             sequence
          Length = 151349

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 303   gacctcaaagcccaccttcca 323
             |||||||||||||||||||||
Sbjct: 58182 gacctcaaagcccaccttcca 58202
to top
>gb|AC154279.2| Mus musculus BAC clone RP24-271E12 from chromosome 17, complete
             sequence
          Length = 173729

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 303   gacctcaaagcccaccttcc 322
             ||||||||||||||||||||
Sbjct: 86216 gacctcaaagcccaccttcc 86235
to top
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence
          Length = 3510148

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 370     gggcggcaaagcatcggcac 389
               ||||||||||||||||||||
Sbjct: 1548823 gggcggcaaagcatcggcac 1548804
to top
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence
          Length = 4126292

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 370     gggcggcaaagcatcggcac 389
               ||||||||||||||||||||
Sbjct: 2783163 gggcggcaaagcatcggcac 2783144
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>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome
          Length = 6093698

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 351     catctggtcgccgaagtgcgggcg 374
               ||||||||||||||||||| ||||
Sbjct: 2403219 catctggtcgccgaagtgctggcg 2403242
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>gb|AC146500.2| Danio rerio clone CH211-130P22, complete sequence
          Length = 165269

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 91    agcacattaatgaggtaaac 110
             ||||||||||||||||||||
Sbjct: 55795 agcacattaatgaggtaaac 55776
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>emb|CR392003.9| Zebrafish DNA sequence from clone DKEY-242N9 in linkage group 3, complete
              sequence
          Length = 182043

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 91     agcacattaatgaggtaaac 110
              ||||||||||||||||||||
Sbjct: 131986 agcacattaatgaggtaaac 132005
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>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome
          Length = 4892717

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 291     gagcgcgccggcgacctcaaagcc 314
               |||||||||||||||| |||||||
Sbjct: 3639122 gagcgcgccggcgaccgcaaagcc 3639145
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>emb|BX640445.1| Bordetella bronchiseptica strain RB50, complete genome; segment 9/16
          Length = 348706

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 197  ccgccttcttcagctcgccg 216
            ||||||||||||||||||||
Sbjct: 1768 ccgccttcttcagctcgccg 1749
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>emb|BX640427.1| Bordetella parapertussis strain 12822, complete genome; segment 5/14
          Length = 348997

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 197    ccgccttcttcagctcgccg 216
              ||||||||||||||||||||
Sbjct: 258561 ccgccttcttcagctcgccg 258542
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>emb|BX640415.1| Bordetella pertussis strain Tohama I, complete genome; segment 5/12
          Length = 347071

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 197    ccgccttcttcagctcgccg 216
              ||||||||||||||||||||
Sbjct: 125837 ccgccttcttcagctcgccg 125818
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>gb|AF494454.1| Gluconacetobacter diazotrophicus NifR3-like protein (nifR3), NtrB
           (ntrB), NtrC (ntrC), NtrY (ntrY), NtrX (ntrX), and NrfA
           (nrfA) genes, complete cds; and HflX-like protein (hflX)
           gene, partial cds
          Length = 9012

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 212 cgccggccctggcccgcatc 231
           ||||||||||||||||||||
Sbjct: 858 cgccggccctggcccgcatc 877
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>gb|AC092749.1| Genomic sequence for Oryza sativa (japonica cultivar-group) cultivar
             Nipponbare clone OSJNBb0023M11, from chromosome 10,
             complete sequence
          Length = 138668

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 225   ccgcatctccgctccctcgc 244
             ||||||||||||||||||||
Sbjct: 55387 ccgcatctccgctccctcgc 55368
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>gb|AF457462.1| Myxococcus xanthus putative oxidoreductase, matrix-associated zinc
            metalloprotease FibA (fibA), and putative phosphoesterase
            genes, complete cds
          Length = 5690

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 169  gagccggcctcgccggtgca 188
            ||||||||||||||||||||
Sbjct: 1173 gagccggcctcgccggtgca 1192
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 225      ccgcatctccgctccctcgc 244
                ||||||||||||||||||||
Sbjct: 10135166 ccgcatctccgctccctcgc 10135147
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                           
Query: 197     ccgccttcttcagctcgccggccctggc 224
               ||||||||||||||||| ||| ||||||
Sbjct: 1959539 ccgccttcttcagctcgtcggtcctggc 1959566
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>emb|AL928788.3| Mouse DNA sequence from clone RP24-294K11 on chromosome 2, complete
             sequence
          Length = 163547

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 304   acctcaaagcccaccttcca 323
             ||||||||||||||||||||
Sbjct: 44443 acctcaaagcccaccttcca 44462
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>emb|BX571790.8| Zebrafish DNA sequence from clone CH211-199M3 in linkage group 20,
             complete sequence
          Length = 200944

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 87    gagaagcacattaatgaggtaaac 110
             |||||||||||||| |||||||||
Sbjct: 67843 gagaagcacattaaagaggtaaac 67866
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>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome
          Length = 4751080

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 288     ctcgagcgcgccggcgacct 307
               ||||||||||||||||||||
Sbjct: 4550614 ctcgagcgcgccggcgacct 4550595
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 225      ccgcatctccgctccctcgc 244
                ||||||||||||||||||||
Sbjct: 10141205 ccgcatctccgctccctcgc 10141186
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>emb|AL808137.4| Mouse DNA sequence from clone RP23-358G23 on chromosome 2, complete
            sequence
          Length = 199593

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 304  acctcaaagcccaccttcca 323
            ||||||||||||||||||||
Sbjct: 6469 acctcaaagcccaccttcca 6450
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>emb|AL833777.11| Mouse DNA sequence from clone RP23-150D10 on chromosome X, complete
             sequence
          Length = 189554

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 304   acctcaaagcccaccttcca 323
             ||||||||||||||||||||
Sbjct: 96323 acctcaaagcccaccttcca 96342
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>gb|AC163629.5| Mus musculus BAC clone RP24-542G7 from chromosome 17, complete
            sequence
          Length = 198902

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 303  gacctcaaagcccaccttcc 322
            ||||||||||||||||||||
Sbjct: 5062 gacctcaaagcccaccttcc 5043


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,477,438
Number of Sequences: 3902068
Number of extensions: 2477438
Number of successful extensions: 53976
Number of sequences better than 10.0: 76
Number of HSP's better than 10.0 without gapping: 77
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 52994
Number of HSP's gapped (non-prelim): 977
length of query: 456
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 434
effective length of database: 17,147,199,772
effective search space: 7441884701048
effective search space used: 7441884701048
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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