Clone Name | rbart24c04 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | AT11C_HUMAN (Q8NB49) Probable phospholipid-transporting ATPase I... | 30 | 3.8 | 2 | AT11C_MOUSE (Q9QZW0) Probable phospholipid-transporting ATPase 1... | 29 | 6.4 |
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>AT11C_HUMAN (Q8NB49) Probable phospholipid-transporting ATPase IG (EC 3.6.3.1)| (ATPase class I type 11C) (ATPase IG) (ATPase IQ) (ATPase class VI type 11C) Length = 1132 Score = 29.6 bits (65), Expect = 3.8 Identities = 10/26 (38%), Positives = 19/26 (73%) Frame = -1 Query: 81 YFFFLRIPRYITTWVYVLLCLFVSLF 4 YF F ++ ++TW+ ++L +F+SLF Sbjct: 1057 YFVFAQMLSSVSTWLAIILLIFISLF 1082
>AT11C_MOUSE (Q9QZW0) Probable phospholipid-transporting ATPase 11C (EC 3.6.3.1)| (Fragment) Length = 347 Score = 28.9 bits (63), Expect = 6.4 Identities = 10/26 (38%), Positives = 19/26 (73%) Frame = -1 Query: 81 YFFFLRIPRYITTWVYVLLCLFVSLF 4 YF F ++ ++TW+ ++L +F+SLF Sbjct: 285 YFVFAQMLCSVSTWLAIILLIFISLF 310 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 46,632,461 Number of Sequences: 219361 Number of extensions: 731044 Number of successful extensions: 2690 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 2301 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2627 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2851757076 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)