>BSH_ARATH (P93045) Chromatin structure remodeling complex protein BSH|
           (Protein bushy) (SNF5 homolog)
          Length = 240

 Score = 31.6 bits (70), Expect = 1.3
 Identities = 15/32 (46%), Positives = 21/32 (65%)
 Frame = -2

Query: 503 SNSKAMNNAVDMFKYFGSKGSVIRKRKEWYLY 408
           S SKA   ++D+ K F  K SV+RKRK+  +Y
Sbjct: 185 SASKASGLSMDLMKLFSFKSSVVRKRKDLDVY 216

>LPXK_BORPE (Q7VVB2) Tetraacyldisaccharide 4'-kinase (EC 2.7.1.130) (Lipid A|
           4'-kinase)
          Length = 347

 Score = 30.8 bits (68), Expect = 2.2
 Identities = 21/64 (32%), Positives = 28/64 (43%)
 Frame = -1

Query: 309 ARTEELPSSREELAAASLPFLPVKCQRVLVCM*DLRRCAQLEQRQCWR*NIGKYPAFLDP 130
           A T  LP   +  A A  PF  +    +LV   D  +CA L+  + W   +G      DP
Sbjct: 278 AHTLALP---DHYAYAQSPFTALDADLILVTAKDAIKCAALDDPRLWAVQVG--TRLSDP 332

Query: 129 DTGD 118
           D GD
Sbjct: 333 DFGD 336

>LPXK_BORPA (Q7W7F7) Tetraacyldisaccharide 4'-kinase (EC 2.7.1.130) (Lipid A|
           4'-kinase)
          Length = 347

 Score = 30.8 bits (68), Expect = 2.2
 Identities = 21/64 (32%), Positives = 28/64 (43%)
 Frame = -1

Query: 309 ARTEELPSSREELAAASLPFLPVKCQRVLVCM*DLRRCAQLEQRQCWR*NIGKYPAFLDP 130
           A T  LP   +  A A  PF  +    +LV   D  +CA L+  + W   +G      DP
Sbjct: 278 AHTLALP---DHYAYAQSPFTALDADLILVTAKDAIKCAALDDPRLWAVQVG--TRLSDP 332

Query: 129 DTGD 118
           D GD
Sbjct: 333 DFGD 336

>LPXK_BORBR (Q7WKU5) Tetraacyldisaccharide 4'-kinase (EC 2.7.1.130) (Lipid A|
           4'-kinase)
          Length = 347

 Score = 30.8 bits (68), Expect = 2.2
 Identities = 21/64 (32%), Positives = 28/64 (43%)
 Frame = -1

Query: 309 ARTEELPSSREELAAASLPFLPVKCQRVLVCM*DLRRCAQLEQRQCWR*NIGKYPAFLDP 130
           A T  LP   +  A A  PF  +    +LV   D  +CA L+  + W   +G      DP
Sbjct: 278 AHTLALP---DHYAYAQSPFTALDADLILVTAKDAIKCAALDDPRLWAVQVG--TRLSDP 332

Query: 129 DTGD 118
           D GD
Sbjct: 333 DFGD 336

>KP6T_UMV6 (P16948) KP6 killer toxin precursor (Killer protein 6) [Contains:|
           KP6 killer toxin alpha subunit (VP10); KP6 killer toxin
           beta subunit (VP12.5)]
          Length = 219

 Score = 30.8 bits (68), Expect = 2.2
 Identities = 15/49 (30%), Positives = 26/49 (53%)
 Frame = +3

Query: 66  TDRMRSRFQSNISST*HDPQCRGLGKQGIYLYSTSSTGAAQAVHNDGDP 212
           +D +R++F S+ SS  ++  CR L K+ I   +T +      +H D  P
Sbjct: 81  SDDLRNQFYSHCSSLNNNMSCRSLSKRTIQDSATDTVDLGAELHRDDPP 129

>EPHB4_HUMAN (P54760) Ephrin type-B receptor 4 precursor (EC 2.7.10.1)|
           (Tyrosine-protein kinase receptor HTK)
          Length = 987

 Score = 30.4 bits (67), Expect = 2.8
 Identities = 13/26 (50%), Positives = 16/26 (61%)
 Frame = -3

Query: 307 EDGRIAEQP*RACSCQPSLPACQVST 230
           EDG+ AEQP   CSC P   A + +T
Sbjct: 241 EDGQWAEQPVTGCSCAPGFEAAEGNT 266

>CASL_HUMAN (Q14511) Enhancer of filamentation 1 (HEF1) (CRK-associated|
           substrate-related protein) (CAS-L) (CasL) (p105)
           (Protein NEDD9) (NY-REN-12 antigen)
          Length = 834

 Score = 29.6 bits (65), Expect = 4.8
 Identities = 17/51 (33%), Positives = 24/51 (47%)
 Frame = +3

Query: 156 LYSTSSTGAAQAVHNDGDPTYILELVDT*QAGREGWQLQALHGCSAILPSS 308
           LY      A +     GD   IL +++    G EGW L +LHG   I+P +
Sbjct: 11  LYDNVPECAEELAFRKGD---ILTVIEQNTGGLEGWWLCSLHGRQGIVPGN 58

>CASL_MOUSE (O35177) Enhancer of filamentation 1 (MEF1) (CRK-associated|
           substrate-related protein) (CAS-L) (p105) (Protein
           NEDD9) (Neural precursor cell expressed developmentally
           down-regulated protein 9)
          Length = 833

 Score = 29.6 bits (65), Expect = 4.8
 Identities = 17/51 (33%), Positives = 24/51 (47%)
 Frame = +3

Query: 156 LYSTSSTGAAQAVHNDGDPTYILELVDT*QAGREGWQLQALHGCSAILPSS 308
           LY      A +     GD   IL +++    G EGW L +LHG   I+P +
Sbjct: 11  LYDNVPECAEELAFRKGD---ILTVIEQNTGGLEGWWLCSLHGRQGIVPGN 58

>VWF_MOUSE (Q8CIZ8) Von Willebrand factor precursor (vWF) [Contains: Von|
            Willebrand antigen II]
          Length = 2813

 Score = 29.3 bits (64), Expect = 6.3
 Identities = 20/78 (25%), Positives = 25/78 (32%), Gaps = 4/78 (5%)
 Frame = -1

Query: 246  PVKCQRVLVCM*DLRRCAQLEQRQCWR*NIGKYPAFLDPDTGDHVMC----C*CLTGNET 79
            P +C+    C      C ++    C        P    P       C    C C   N T
Sbjct: 2351 PGECRPTFTCDCRKEECKRVSPPSC--------PPHRTPTLRKTQCCDEYECACSCVNST 2402

Query: 78   ASCPLGTFCCANSFSCQC 25
             SCPLG    A +  C C
Sbjct: 2403 LSCPLGYLASATTNDCGC 2420


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 67,219,361
Number of Sequences: 219361
Number of extensions: 1279292
Number of successful extensions: 3157
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 3053
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3156
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3638905326
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)