Clone Name | rbart24b09 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | GHT2_SCHPO (O74969) High-affinity glucose transporter ght2 (Hexo... | 31 | 0.99 | 2 | SMCA4_HUMAN (P51532) Probable global transcription activator SNF... | 29 | 3.7 | 3 | ARAA_THEMA (Q9WYB3) L-arabinose isomerase (EC 5.3.1.4) | 28 | 4.9 | 4 | IF37_HUMAN (O15371) Eukaryotic translation initiation factor 3 s... | 28 | 6.4 |
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>GHT2_SCHPO (O74969) High-affinity glucose transporter ght2 (Hexose transporter| 2) Length = 531 Score = 30.8 bits (68), Expect = 0.99 Identities = 16/51 (31%), Positives = 22/51 (43%) Frame = -1 Query: 215 PWNGGSFILEVMPRQVVQKEKKRLEMKPLEQANLKEPMDGPSGDPQHASEE 63 PW G+F L ++ V+KEK R E E PQ++S E Sbjct: 477 PWESGNFKLNYSEQKKVEKEKSRKGGARGESVEYVERASNTDSSPQYSSHE 527
>SMCA4_HUMAN (P51532) Probable global transcription activator SNF2L4 (EC| 3.6.1.-) (ATP-dependent helicase SMARCA4) (SNF2-beta) (BRG-1 protein) (Mitotic growth and transcription activator) (Brahma protein homolog 1) (SWI/SNF-related matrix-associated actin Length = 1647 Score = 28.9 bits (63), Expect = 3.7 Identities = 15/50 (30%), Positives = 28/50 (56%), Gaps = 4/50 (8%) Frame = -1 Query: 194 ILEVMPR----QVVQKEKKRLEMKPLEQANLKEPMDGPSGDPQHASEEPS 57 + E++P+ QV +++KK+ + K E A + P GP G+P + + S Sbjct: 564 LTELVPQHKAAQVAKEKKKKKKKKKAENAEGQTPAIGPDGEPLDETSQMS 613
>ARAA_THEMA (Q9WYB3) L-arabinose isomerase (EC 5.3.1.4)| Length = 496 Score = 28.5 bits (62), Expect = 4.9 Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 4/49 (8%) Frame = -1 Query: 203 GSFILEVMPRQVVQKEKKRLEMKPLEQANLKEP----MDGPSGDPQHAS 69 G+ +LEV P + KEK R+E+ PL +P DG G +AS Sbjct: 344 GAHMLEVCP--TIAKEKPRIEVHPLSIGGKADPARLVFDGQEGPAVNAS 390
>IF37_HUMAN (O15371) Eukaryotic translation initiation factor 3 subunit 7| (eIF-3 zeta) (eIF3 p66) (eIF3d) Length = 548 Score = 28.1 bits (61), Expect = 6.4 Identities = 15/47 (31%), Positives = 28/47 (59%), Gaps = 2/47 (4%) Frame = -1 Query: 197 FILEVMPRQVVQKEKK--RLEMKPLEQANLKEPMDGPSGDPQHASEE 63 F L+++P+ QKE++ RL+ K +Q +++ D S P+ +S E Sbjct: 117 FNLQILPKSAKQKERERIRLQKKFQKQFGVRQKWDQKSQKPRDSSVE 163 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 32,997,956 Number of Sequences: 219361 Number of extensions: 518018 Number of successful extensions: 1726 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 1695 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1726 length of database: 80,573,946 effective HSP length: 52 effective length of database: 69,167,174 effective search space used: 1660012176 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)