Clone Name | rbart24b05 |
---|---|
Clone Library Name | barley_pub |
>gb|AY104729.1| Zea mays PCO094895 mRNA sequence Length = 594 Score = 73.8 bits (37), Expect = 4e-10 Identities = 73/85 (85%) Strand = Plus / Minus Query: 328 gaaactggggaggtggtgaactgtccgtccttgaaaaaatggatgtactgctgcggcaaa 387 |||||||| || ||||||||||| || ||||||||| |||||||||||| || ||||| Sbjct: 282 gaaactggtgaagtggtgaactgcccatccttgaaactatggatgtactgttgaggcaat 223 Query: 388 ggatgctccacccagtcgccatcag 412 | |||||||||||| || ||||||| Sbjct: 222 gcatgctccacccaatcaccatcag 198
>gb|AC146936.4| Oryza sativa (japonica cultivar-group) chromosome 3 clone B1154F06 map near C10769, complete sequence Length = 194856 Score = 46.1 bits (23), Expect = 0.100 Identities = 71/87 (81%) Strand = Plus / Minus Query: 313 tatgcgccggaatgagaaactggggaggtggtgaactgtccgtccttgaaaaaatggatg 372 ||||| ||||||||||| || || |||||| |||| || ||||| ||||| |||||| Sbjct: 116774 tatgctccggaatgagacaccggtgaggtgatgaattgcccgtctttgaagctgtggatg 116715 Query: 373 tactgctgcggcaaaggatgctccacc 399 ||||| || ||||||| ||| |||||| Sbjct: 116714 tactgttggggcaaagcatgttccacc 116688
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 46.1 bits (23), Expect = 0.100 Identities = 71/87 (81%) Strand = Plus / Plus Query: 313 tatgcgccggaatgagaaactggggaggtggtgaactgtccgtccttgaaaaaatggatg 372 ||||| ||||||||||| || || |||||| |||| || ||||| ||||| |||||| Sbjct: 29022517 tatgctccggaatgagacaccggtgaggtgatgaattgcccgtctttgaagctgtggatg 29022576 Query: 373 tactgctgcggcaaaggatgctccacc 399 ||||| || ||||||| ||| |||||| Sbjct: 29022577 tactgttggggcaaagcatgttccacc 29022603
>gb|AY332722.1| Homo sapiens insulin-like growth factor 1 receptor (IGF1R) gene, complete cds Length = 309626 Score = 46.1 bits (23), Expect = 0.100 Identities = 23/23 (100%) Strand = Plus / Minus Query: 128 acactgggcaaatgaatgacaag 150 ||||||||||||||||||||||| Sbjct: 37947 acactgggcaaatgaatgacaag 37925
>gb|AC118660.5| Homo sapiens chromosome 15, clone RP11-631H11, complete sequence Length = 167851 Score = 46.1 bits (23), Expect = 0.100 Identities = 23/23 (100%) Strand = Plus / Minus Query: 128 acactgggcaaatgaatgacaag 150 ||||||||||||||||||||||| Sbjct: 146555 acactgggcaaatgaatgacaag 146533
>gb|AC055807.11| Homo sapiens chromosome 15, clone RP11-262P8, complete sequence Length = 178201 Score = 46.1 bits (23), Expect = 0.100 Identities = 23/23 (100%) Strand = Plus / Minus Query: 128 acactgggcaaatgaatgacaag 150 ||||||||||||||||||||||| Sbjct: 144 acactgggcaaatgaatgacaag 122
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 46.1 bits (23), Expect = 0.100 Identities = 71/87 (81%) Strand = Plus / Plus Query: 313 tatgcgccggaatgagaaactggggaggtggtgaactgtccgtccttgaaaaaatggatg 372 ||||| ||||||||||| || || |||||| |||| || ||||| ||||| |||||| Sbjct: 29113939 tatgctccggaatgagacaccggtgaggtgatgaattgcccgtctttgaagctgtggatg 29113998 Query: 373 tactgctgcggcaaaggatgctccacc 399 ||||| || ||||||| ||| |||||| Sbjct: 29113999 tactgttggggcaaagcatgttccacc 29114025
>gb|AC150566.16| Medicago truncatula clone mth2-21o10, complete sequence Length = 130981 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 425 gaaccaatacattcatttcac 445 ||||||||||||||||||||| Sbjct: 65285 gaaccaatacattcatttcac 65265
>emb|AL591131.9| Mouse DNA sequence from clone RP23-151A11 on chromosome 11, complete sequence Length = 114878 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 396 cacccagtcgccatcagtctc 416 ||||||||||||||||||||| Sbjct: 112393 cacccagtcgccatcagtctc 112373
>gb|AC142129.4| Rattus norvegicus BAC CH230-183M21 (Children's Hospital Oakland Research Institute Rat (BN/SsNHsd/MCW) BAC library) complete sequence Length = 215272 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 134 ggcaaatgaatgacaagagaa 154 ||||||||||||||||||||| Sbjct: 20609 ggcaaatgaatgacaagagaa 20629
>dbj|AP001791.4| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-427G12, complete sequence Length = 140000 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 267 caaacaaagagccacacaaaa 287 ||||||||||||||||||||| Sbjct: 11977 caaacaaagagccacacaaaa 11957
>gb|AC002324.1|AC002324 Mus musculus chromosome 11, clone 475_H_14, complete sequence Length = 171952 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 396 cacccagtcgccatcagtctc 416 ||||||||||||||||||||| Sbjct: 85443 cacccagtcgccatcagtctc 85463
>ref|NM_128908.3| Arabidopsis thaliana ANAC041; transcription factor AT2G33480 (ANAC041) mRNA, complete cds Length = 1030 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 187 gaagaagtcgaacaagagctacaacaac 214 |||||||||||| |||||| |||||||| Sbjct: 778 gaagaagtcgaagaagagcaacaacaac 751
>gb|AC127575.4| Mus musculus BAC clone RP24-240L12 from chromosome 8, complete sequence Length = 162564 Score = 40.1 bits (20), Expect = 6.1 Identities = 32/36 (88%) Strand = Plus / Minus Query: 265 aacaaacaaagagccacacaaaaagagggacatatt 300 |||||||||| | || ||||||||||||||||||| Sbjct: 94310 aacaaacaaacaaacaaacaaaaagagggacatatt 94275
>gb|AF200413.1| Wiebesia frustrata cytochrome oxidase subunit I gene, partial cds; tRNA-Leu gene, complete sequence; and cytochrome oxidase subunit II gene, partial cds; mitochondrial genes for mitochondrial products Length = 1930 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 21 tcataaaaagaatgatcagc 40 |||||||||||||||||||| Sbjct: 1489 tcataaaaagaatgatcagc 1470
>gb|AF200380.1| Ceratosolen sp. GW700 cytochrome oxidase subunit I gene, partial cds; tRNA-Leu gene, complete sequence; and cytochrome oxidase subunit II gene, partial cds; mitochondrial Length = 1827 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 21 tcataaaaagaatgatcagc 40 |||||||||||||||||||| Sbjct: 1435 tcataaaaagaatgatcagc 1416
>gb|AC122841.4| Mus musculus BAC clone RP23-194E5 from 3, complete sequence Length = 200088 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 76 aaaagtaaatataccaacca 95 |||||||||||||||||||| Sbjct: 90950 aaaagtaaatataccaacca 90931
>gb|BC005395.1| Homo sapiens hemopexin, mRNA (cDNA clone MGC:12533 IMAGE:4071616), complete cds Length = 1621 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 324 atgagaaactggggaggtgg 343 |||||||||||||||||||| Sbjct: 1564 atgagaaactggggaggtgg 1545
>gb|AC102849.5| Mus musculus, clone RP24-423P7, complete sequence Length = 162547 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 321 ggaatgagaaactggggagg 340 |||||||||||||||||||| Sbjct: 135891 ggaatgagaaactggggagg 135872
>emb|BX276110.5| Human DNA sequence from clone RP11-218L14 on chromosome X Contains the gene for a novel protein identical to coagulation factor VIII-associated (intronic transcript) F8A, the H2AFB gene for member B of the H2A histone family, two novel genes, the 3' end of the TMLHE gene for epsilon trimethyllysine hydroxylase and two CpG islands, complete sequence Length = 147878 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 3 gacaaactgagagccatatcataa 26 |||||||||||||||| ||||||| Sbjct: 120587 gacaaactgagagccaaatcataa 120610
>emb|AL359835.10| Human DNA sequence from clone RP11-191J5 on chromosome 1q31.1-31.3 Contains STSs and GSSs, complete sequence Length = 172747 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 3 gacaaactgagagccatatcataa 26 |||||||||||||||| ||||||| Sbjct: 86218 gacaaactgagagccaaatcataa 86241
>emb|AL354896.16| Human DNA sequence from clone RP11-512M17 on chromosome 13, complete sequence Length = 209743 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 130 actgggcaaatgaatgacaa 149 |||||||||||||||||||| Sbjct: 188173 actgggcaaatgaatgacaa 188154
>emb|Y07760.1|CAV1GENOM Canine adenovirus type 1 complete genome Length = 30536 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 96 tgtgcaaggaaaacatacag 115 |||||||||||||||||||| Sbjct: 15713 tgtgcaaggaaaacatacag 15694
>emb|X02537.1|HSHEPEXR Human mRNA for serum beta-glycoprotein hemopexin Length = 1485 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 324 atgagaaactggggaggtgg 343 |||||||||||||||||||| Sbjct: 1458 atgagaaactggggaggtgg 1439
>gb|AC010032.10| Drosophila melanogaster 3L BAC RP98-2N23 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 192399 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 375 ctgctgcggcaaaggatgct 394 |||||||||||||||||||| Sbjct: 42571 ctgctgcggcaaaggatgct 42552
>gb|AY122170.1| Drosophila melanogaster LD28815 full insert cDNA Length = 6352 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 375 ctgctgcggcaaaggatgct 394 |||||||||||||||||||| Sbjct: 2436 ctgctgcggcaaaggatgct 2417
>emb|CR617755.1| full-length cDNA clone CS0DM004YJ20 of Fetal liver of Homo sapiens (human) Length = 1547 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 324 atgagaaactggggaggtgg 343 |||||||||||||||||||| Sbjct: 1535 atgagaaactggggaggtgg 1516
>emb|CR614628.1| full-length cDNA clone CS0DF006YI22 of Fetal brain of Homo sapiens (human) Length = 1366 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 324 atgagaaactggggaggtgg 343 |||||||||||||||||||| Sbjct: 1350 atgagaaactggggaggtgg 1331
>emb|CR611907.1| full-length cDNA clone CS0DJ010YE24 of T cells (Jurkat cell line) Cot 10-normalized of Homo sapiens (human) Length = 1547 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 324 atgagaaactggggaggtgg 343 |||||||||||||||||||| Sbjct: 1533 atgagaaactggggaggtgg 1514
>gb|AC084337.7| Homo sapiens chromosome 11, clone CTD-2010I16, complete sequence Length = 112295 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 324 atgagaaactggggaggtgg 343 |||||||||||||||||||| Sbjct: 19892 atgagaaactggggaggtgg 19911
>emb|CR601115.1| full-length cDNA clone CS0DF010YK01 of Fetal brain of Homo sapiens (human) Length = 1051 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 324 atgagaaactggggaggtgg 343 |||||||||||||||||||| Sbjct: 1026 atgagaaactggggaggtgg 1007
>gb|AC092923.8| Homo sapiens 3 BAC RP11-145K15 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 150216 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 4 acaaactgagagccatatcataaa 27 |||||||||||| ||||||||||| Sbjct: 20202 acaaactgagagacatatcataaa 20179
>emb|CR595529.1| full-length cDNA clone CS0DM007YC08 of Fetal liver of Homo sapiens (human) Length = 1542 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 324 atgagaaactggggaggtgg 343 |||||||||||||||||||| Sbjct: 1528 atgagaaactggggaggtgg 1509
>gb|AC068733.12| Homo sapiens chromosome 11, clone RP11-304C12, complete sequence Length = 191656 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 324 atgagaaactggggaggtgg 343 |||||||||||||||||||| Sbjct: 169479 atgagaaactggggaggtgg 169498
>gb|AC110989.3| Homo sapiens 3q BAC RP11-15M16 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 161520 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 3 gacaaactgagagccatatcataa 26 |||||||||||||||| ||||||| Sbjct: 132926 gacaaactgagagccaaatcataa 132949
>ref|NM_167844.1| Drosophila melanogaster CG32479-RA (CG32479), mRNA Length = 6356 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 375 ctgctgcggcaaaggatgct 394 |||||||||||||||||||| Sbjct: 2444 ctgctgcggcaaaggatgct 2425
>gb|AC002332.3| Arabidopsis thaliana chromosome 2 clone F4P9 map ve015, complete sequence Length = 152593 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 187 gaagaagtcgaacaagagctacaacaac 214 |||||||||||| |||||| |||||||| Sbjct: 86006 gaagaagtcgaagaagagcaacaacaac 85979
>gb|AY093730.1| Arabidopsis thaliana At2g33480/F4P9.25 mRNA, complete cds Length = 807 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 187 gaagaagtcgaacaagagctacaacaac 214 |||||||||||| |||||| |||||||| Sbjct: 710 gaagaagtcgaagaagagcaacaacaac 683
>gb|DP000051.1| Carollia perspicillata target 126 genomic scaffold Length = 501879 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 25 aaaaagaatgatcagccaaa 44 |||||||||||||||||||| Sbjct: 441738 aaaaagaatgatcagccaaa 441719
>gb|AF410299.1|AF410299 Arabidopsis thaliana At2g33480/F4P9.25 mRNA, complete cds Length = 918 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 187 gaagaagtcgaacaagagctacaacaac 214 |||||||||||| |||||| |||||||| Sbjct: 768 gaagaagtcgaagaagagcaacaacaac 741
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 138 aatgaatgacaagagaaacaacaa 161 |||||||||||||| ||||||||| Sbjct: 10956138 aatgaatgacaagataaacaacaa 10956115
>gb|AF325080.1|AF325080 Arabidopsis thaliana putative NAM (no apical meristem)-like protein (At2g33480) mRNA, complete cds Length = 807 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 187 gaagaagtcgaacaagagctacaacaac 214 |||||||||||| |||||| |||||||| Sbjct: 710 gaagaagtcgaagaagagcaacaacaac 683
>emb|BX821081.1|CNS0AA5L Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL12ZG06 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 977 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 187 gaagaagtcgaacaagagctacaacaac 214 |||||||||||| |||||| |||||||| Sbjct: 778 gaagaagtcgaagaagagcaacaacaac 751
>gb|AC087565.5| Homo sapiens chromosome 16 clone RP11-53L24, complete sequence Length = 192937 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 40 ccaaaccatacagaagttgc 59 |||||||||||||||||||| Sbjct: 111514 ccaaaccatacagaagttgc 111495
>gb|AC121758.14| Homo sapiens 12 BAC RP11-74M13 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 130479 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 3 gacaaactgagagccatatcataa 26 |||||||||||||||| ||||||| Sbjct: 7842 gacaaactgagagccaaatcataa 7819
>gb|AC007736.3| Homo sapiens BAC clone RP11-15J24 from 2, complete sequence Length = 172476 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 321 ggaatgagaaactggggagg 340 |||||||||||||||||||| Sbjct: 29827 ggaatgagaaactggggagg 29808
>dbj|AK174827.1| Ciona intestinalis cDNA, clone:cilv082m04, full insert sequence Length = 1630 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 195 cgaacaagagctacaacaac 214 |||||||||||||||||||| Sbjct: 1450 cgaacaagagctacaacaac 1469
>dbj|AP005106.6| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0091I19 Length = 126544 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 138 aatgaatgacaagagaaacaacaa 161 |||||||||||||| ||||||||| Sbjct: 18081 aatgaatgacaagataaacaacaa 18058
>dbj|AP005766.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0028O21 Length = 134543 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 138 aatgaatgacaagagaaacaacaa 161 |||||||||||||| ||||||||| Sbjct: 132513 aatgaatgacaagataaacaacaa 132490
>dbj|AB113354.2| Sus scrofa 433 kb genomic segment, located between the non-classical and classical SLA class I gene cluster, clone: BAC 499E6 Length = 154749 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 8 actgagagccatatcataaaaaga 31 |||||||||||||||| ||||||| Sbjct: 71961 actgagagccatatcagaaaaaga 71938
>gb|AC006600.4|AC006600 Homo sapiens chromosome 17, clone hRPK.502_F_1, complete sequence Length = 170453 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 359 tgaaaaaatggatgtactgc 378 |||||||||||||||||||| Sbjct: 49057 tgaaaaaatggatgtactgc 49076
>gb|AE003469.3| Drosophila melanogaster chromosome 3L, section 3 of 83 of the complete sequence Length = 286515 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 375 ctgctgcggcaaaggatgct 394 |||||||||||||||||||| Sbjct: 261182 ctgctgcggcaaaggatgct 261163
>gb|AC131028.13| Mus musculus chromosome 3, clone RP23-293M23, complete sequence Length = 264928 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 321 ggaatgagaaactggggagg 340 |||||||||||||||||||| Sbjct: 179241 ggaatgagaaactggggagg 179260
>emb|AL596422.2|HSAU55C17 Homo sapiens chromosome X clone cos55C17 map Xq28, complete sequence Length = 34045 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 3 gacaaactgagagccatatcataa 26 |||||||||||||||| ||||||| Sbjct: 5077 gacaaactgagagccaaatcataa 5100
>gb|AC134907.5| Mus musculus BAC clone RP23-362K17 from 8, complete sequence Length = 186341 Score = 40.1 bits (20), Expect = 6.1 Identities = 32/36 (88%) Strand = Plus / Plus Query: 265 aacaaacaaagagccacacaaaaagagggacatatt 300 |||||||||| | || ||||||||||||||||||| Sbjct: 6302 aacaaacaaacaaacaaacaaaaagagggacatatt 6337
>dbj|AP006627.1| Bacillus clausii KSM-K16 DNA, complete genome Length = 4303871 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 429 caatacattcatttcactgg 448 |||||||||||||||||||| Sbjct: 1133282 caatacattcatttcactgg 1133301
>gb|U55001.1|CAU55001 Canine adenovirus type 1 E1A protein, small T-antigen, large T-antigen, protein IX, IVa2 protein, DNA polymerase, pTP, 52-55K protein, pIIIa, penton base protein, pVII protein, pV protein, Mu peptide precursor, pVI protein, viral protein II, endoproteinase, E2A-DBP, 100 kD protein, L4-22kD protein, L4-33 kD protein, pVIII, virion component IV, U-exon, E4 orf5, E4 orf4, E4 orf3, E4 orf2, and E4 orf1 genes, complete cds Length = 30288 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 96 tgtgcaaggaaaacatacag 115 |||||||||||||||||||| Sbjct: 15752 tgtgcaaggaaaacatacag 15733
>gb|M36803.1|HUMHXMA07 Human hemopexin gene, exon 10 Length = 629 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 324 atgagaaactggggaggtgg 343 |||||||||||||||||||| Sbjct: 441 atgagaaactggggaggtgg 422
>emb|AL732433.7| Mouse DNA sequence from clone RP23-349N21 on chromosome X, complete sequence Length = 196655 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 72 tacaaaaagtaaatataccaacca 95 ||||||||| |||||||||||||| Sbjct: 148568 tacaaaaaggaaatataccaacca 148591
>gb|J03048.1|HUMHXMA Huma hemopexin mRNA, 3' end Length = 1546 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 324 atgagaaactggggaggtgg 343 |||||||||||||||||||| Sbjct: 1519 atgagaaactggggaggtgg 1500 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,904,234 Number of Sequences: 3902068 Number of extensions: 4904234 Number of successful extensions: 90930 Number of sequences better than 10.0: 60 Number of HSP's better than 10.0 without gapping: 57 Number of HSP's successfully gapped in prelim test: 3 Number of HSP's that attempted gapping in prelim test: 90751 Number of HSP's gapped (non-prelim): 179 length of query: 456 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 434 effective length of database: 17,147,199,772 effective search space: 7441884701048 effective search space used: 7441884701048 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)