ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart24b05
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1gb|AY104729.1| Zea mays PCO094895 mRNA sequence 74 4e-10
2gb|AC146936.4| Oryza sativa (japonica cultivar-group) chromosome... 46 0.100
3gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 46 0.100
4gb|AY332722.1| Homo sapiens insulin-like growth factor 1 recepto... 46 0.100
5gb|AC118660.5| Homo sapiens chromosome 15, clone RP11-631H11, co... 46 0.100
6gb|AC055807.11| Homo sapiens chromosome 15, clone RP11-262P8, co... 46 0.100
7dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.100
8gb|AC150566.16| Medicago truncatula clone mth2-21o10, complete s... 42 1.6
9emb|AL591131.9| Mouse DNA sequence from clone RP23-151A11 on chr... 42 1.6
10gb|AC142129.4| Rattus norvegicus BAC CH230-183M21 (Children's H... 42 1.6
11dbj|AP001791.4| Homo sapiens genomic DNA, chromosome 11q, clone:... 42 1.6
12gb|AC002324.1|AC002324 Mus musculus chromosome 11, clone 475_H_1... 42 1.6
13ref|NM_128908.3| Arabidopsis thaliana ANAC041; transcription fac... 40 6.1
14gb|AC127575.4| Mus musculus BAC clone RP24-240L12 from chromosom... 40 6.1
15gb|AF200413.1| Wiebesia frustrata cytochrome oxidase subunit I g... 40 6.1
16gb|AF200380.1| Ceratosolen sp. GW700 cytochrome oxidase subunit ... 40 6.1
17gb|AC122841.4| Mus musculus BAC clone RP23-194E5 from 3, complet... 40 6.1
18gb|BC005395.1| Homo sapiens hemopexin, mRNA (cDNA clone MGC:1253... 40 6.1
19gb|AC102849.5| Mus musculus, clone RP24-423P7, complete sequence 40 6.1
20emb|BX276110.5| Human DNA sequence from clone RP11-218L14 on chr... 40 6.1
21emb|AL359835.10| Human DNA sequence from clone RP11-191J5 on chr... 40 6.1
22emb|AL354896.16| Human DNA sequence from clone RP11-512M17 on ch... 40 6.1
23emb|Y07760.1|CAV1GENOM Canine adenovirus type 1 complete genome 40 6.1
24emb|X02537.1|HSHEPEXR Human mRNA for serum beta-glycoprotein hem... 40 6.1
25gb|AC010032.10| Drosophila melanogaster 3L BAC RP98-2N23 (Roswel... 40 6.1
26gb|AY122170.1| Drosophila melanogaster LD28815 full insert cDNA 40 6.1
27emb|CR617755.1| full-length cDNA clone CS0DM004YJ20 of Fetal liv... 40 6.1
28emb|CR614628.1| full-length cDNA clone CS0DF006YI22 of Fetal bra... 40 6.1
29emb|CR611907.1| full-length cDNA clone CS0DJ010YE24 of T cells (... 40 6.1
30gb|AC084337.7| Homo sapiens chromosome 11, clone CTD-2010I16, co... 40 6.1
31emb|CR601115.1| full-length cDNA clone CS0DF010YK01 of Fetal bra... 40 6.1
32gb|AC092923.8| Homo sapiens 3 BAC RP11-145K15 (Roswell Park Canc... 40 6.1
33emb|CR595529.1| full-length cDNA clone CS0DM007YC08 of Fetal liv... 40 6.1
34gb|AC068733.12| Homo sapiens chromosome 11, clone RP11-304C12, c... 40 6.1
35gb|AC110989.3| Homo sapiens 3q BAC RP11-15M16 (Roswell Park Canc... 40 6.1
36ref|NM_167844.1| Drosophila melanogaster CG32479-RA (CG32479), mRNA 40 6.1
37gb|AC002332.3| Arabidopsis thaliana chromosome 2 clone F4P9 map ... 40 6.1
38gb|AY093730.1| Arabidopsis thaliana At2g33480/F4P9.25 mRNA, comp... 40 6.1
39gb|DP000051.1| Carollia perspicillata target 126 genomic scaffold 40 6.1
40gb|AF410299.1|AF410299 Arabidopsis thaliana At2g33480/F4P9.25 mR... 40 6.1
41dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.1
42gb|AF325080.1|AF325080 Arabidopsis thaliana putative NAM (no api... 40 6.1
43emb|BX821081.1|CNS0AA5L Arabidopsis thaliana Full-length cDNA Co... 40 6.1
44gb|AC087565.5| Homo sapiens chromosome 16 clone RP11-53L24, comp... 40 6.1
45gb|AC121758.14| Homo sapiens 12 BAC RP11-74M13 (Roswell Park Can... 40 6.1
46gb|AC007736.3| Homo sapiens BAC clone RP11-15J24 from 2, complet... 40 6.1
47dbj|AK174827.1| Ciona intestinalis cDNA, clone:cilv082m04, full ... 40 6.1
48dbj|AP005106.6| Oryza sativa (japonica cultivar-group) genomic D... 40 6.1
49dbj|AP005766.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.1
50dbj|AB113354.2| Sus scrofa 433 kb genomic segment, located betwe... 40 6.1
51gb|AC006600.4|AC006600 Homo sapiens chromosome 17, clone hRPK.50... 40 6.1
52gb|AE003469.3| Drosophila melanogaster chromosome 3L, section 3 ... 40 6.1
53gb|AC131028.13| Mus musculus chromosome 3, clone RP23-293M23, co... 40 6.1
54emb|AL596422.2|HSAU55C17 Homo sapiens chromosome X clone cos55C1... 40 6.1
55gb|AC134907.5| Mus musculus BAC clone RP23-362K17 from 8, comple... 40 6.1
56dbj|AP006627.1| Bacillus clausii KSM-K16 DNA, complete genome 40 6.1
57gb|U55001.1|CAU55001 Canine adenovirus type 1 E1A protein, small... 40 6.1
58gb|M36803.1|HUMHXMA07 Human hemopexin gene, exon 10 40 6.1
59emb|AL732433.7| Mouse DNA sequence from clone RP23-349N21 on chr... 40 6.1
60gb|J03048.1|HUMHXMA Huma hemopexin mRNA, 3' end 40 6.1

>gb|AY104729.1| Zea mays PCO094895 mRNA sequence
          Length = 594

 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 73/85 (85%)
 Strand = Plus / Minus

                                                                       
Query: 328 gaaactggggaggtggtgaactgtccgtccttgaaaaaatggatgtactgctgcggcaaa 387
           |||||||| || ||||||||||| || |||||||||  |||||||||||| || ||||| 
Sbjct: 282 gaaactggtgaagtggtgaactgcccatccttgaaactatggatgtactgttgaggcaat 223

                                    
Query: 388 ggatgctccacccagtcgccatcag 412
           | |||||||||||| || |||||||
Sbjct: 222 gcatgctccacccaatcaccatcag 198



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>gb|AC146936.4| Oryza sativa (japonica cultivar-group) chromosome 3 clone B1154F06 map
              near C10769, complete sequence
          Length = 194856

 Score = 46.1 bits (23), Expect = 0.100
 Identities = 71/87 (81%)
 Strand = Plus / Minus

                                                                          
Query: 313    tatgcgccggaatgagaaactggggaggtggtgaactgtccgtccttgaaaaaatggatg 372
              ||||| ||||||||||| || || |||||| |||| || ||||| |||||    ||||||
Sbjct: 116774 tatgctccggaatgagacaccggtgaggtgatgaattgcccgtctttgaagctgtggatg 116715

                                         
Query: 373    tactgctgcggcaaaggatgctccacc 399
              ||||| || ||||||| ||| ||||||
Sbjct: 116714 tactgttggggcaaagcatgttccacc 116688



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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 46.1 bits (23), Expect = 0.100
 Identities = 71/87 (81%)
 Strand = Plus / Plus

                                                                            
Query: 313      tatgcgccggaatgagaaactggggaggtggtgaactgtccgtccttgaaaaaatggatg 372
                ||||| ||||||||||| || || |||||| |||| || ||||| |||||    ||||||
Sbjct: 29022517 tatgctccggaatgagacaccggtgaggtgatgaattgcccgtctttgaagctgtggatg 29022576

                                           
Query: 373      tactgctgcggcaaaggatgctccacc 399
                ||||| || ||||||| ||| ||||||
Sbjct: 29022577 tactgttggggcaaagcatgttccacc 29022603



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>gb|AY332722.1| Homo sapiens insulin-like growth factor 1 receptor (IGF1R) gene,
             complete cds
          Length = 309626

 Score = 46.1 bits (23), Expect = 0.100
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 128   acactgggcaaatgaatgacaag 150
             |||||||||||||||||||||||
Sbjct: 37947 acactgggcaaatgaatgacaag 37925



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>gb|AC118660.5| Homo sapiens chromosome 15, clone RP11-631H11, complete sequence
          Length = 167851

 Score = 46.1 bits (23), Expect = 0.100
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 128    acactgggcaaatgaatgacaag 150
              |||||||||||||||||||||||
Sbjct: 146555 acactgggcaaatgaatgacaag 146533



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>gb|AC055807.11| Homo sapiens chromosome 15, clone RP11-262P8, complete sequence
          Length = 178201

 Score = 46.1 bits (23), Expect = 0.100
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 128 acactgggcaaatgaatgacaag 150
           |||||||||||||||||||||||
Sbjct: 144 acactgggcaaatgaatgacaag 122



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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 46.1 bits (23), Expect = 0.100
 Identities = 71/87 (81%)
 Strand = Plus / Plus

                                                                            
Query: 313      tatgcgccggaatgagaaactggggaggtggtgaactgtccgtccttgaaaaaatggatg 372
                ||||| ||||||||||| || || |||||| |||| || ||||| |||||    ||||||
Sbjct: 29113939 tatgctccggaatgagacaccggtgaggtgatgaattgcccgtctttgaagctgtggatg 29113998

                                           
Query: 373      tactgctgcggcaaaggatgctccacc 399
                ||||| || ||||||| ||| ||||||
Sbjct: 29113999 tactgttggggcaaagcatgttccacc 29114025



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>gb|AC150566.16| Medicago truncatula clone mth2-21o10, complete sequence
          Length = 130981

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 425   gaaccaatacattcatttcac 445
             |||||||||||||||||||||
Sbjct: 65285 gaaccaatacattcatttcac 65265



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>emb|AL591131.9| Mouse DNA sequence from clone RP23-151A11 on chromosome 11, complete
              sequence
          Length = 114878

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 396    cacccagtcgccatcagtctc 416
              |||||||||||||||||||||
Sbjct: 112393 cacccagtcgccatcagtctc 112373



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>gb|AC142129.4| Rattus norvegicus  BAC CH230-183M21 (Children's Hospital Oakland
             Research Institute Rat (BN/SsNHsd/MCW) BAC library)
             complete sequence
          Length = 215272

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 134   ggcaaatgaatgacaagagaa 154
             |||||||||||||||||||||
Sbjct: 20609 ggcaaatgaatgacaagagaa 20629



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>dbj|AP001791.4| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-427G12, complete
             sequence
          Length = 140000

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 267   caaacaaagagccacacaaaa 287
             |||||||||||||||||||||
Sbjct: 11977 caaacaaagagccacacaaaa 11957



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>gb|AC002324.1|AC002324 Mus musculus chromosome 11, clone 475_H_14, complete sequence
          Length = 171952

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 396   cacccagtcgccatcagtctc 416
             |||||||||||||||||||||
Sbjct: 85443 cacccagtcgccatcagtctc 85463



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>ref|NM_128908.3| Arabidopsis thaliana ANAC041; transcription factor AT2G33480
           (ANAC041) mRNA, complete cds
          Length = 1030

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 187 gaagaagtcgaacaagagctacaacaac 214
           |||||||||||| |||||| ||||||||
Sbjct: 778 gaagaagtcgaagaagagcaacaacaac 751



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>gb|AC127575.4| Mus musculus BAC clone RP24-240L12 from chromosome 8, complete sequence
          Length = 162564

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                 
Query: 265   aacaaacaaagagccacacaaaaagagggacatatt 300
             |||||||||| |  || |||||||||||||||||||
Sbjct: 94310 aacaaacaaacaaacaaacaaaaagagggacatatt 94275



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>gb|AF200413.1| Wiebesia frustrata cytochrome oxidase subunit I gene, partial cds;
            tRNA-Leu gene, complete sequence; and cytochrome oxidase
            subunit II gene, partial cds; mitochondrial genes for
            mitochondrial products
          Length = 1930

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 21   tcataaaaagaatgatcagc 40
            ||||||||||||||||||||
Sbjct: 1489 tcataaaaagaatgatcagc 1470



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>gb|AF200380.1| Ceratosolen sp. GW700 cytochrome oxidase subunit I gene, partial cds;
            tRNA-Leu gene, complete sequence; and cytochrome oxidase
            subunit II gene, partial cds; mitochondrial
          Length = 1827

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 21   tcataaaaagaatgatcagc 40
            ||||||||||||||||||||
Sbjct: 1435 tcataaaaagaatgatcagc 1416



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>gb|AC122841.4| Mus musculus BAC clone RP23-194E5 from 3, complete sequence
          Length = 200088

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 76    aaaagtaaatataccaacca 95
             ||||||||||||||||||||
Sbjct: 90950 aaaagtaaatataccaacca 90931



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>gb|BC005395.1| Homo sapiens hemopexin, mRNA (cDNA clone MGC:12533 IMAGE:4071616),
            complete cds
          Length = 1621

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 324  atgagaaactggggaggtgg 343
            ||||||||||||||||||||
Sbjct: 1564 atgagaaactggggaggtgg 1545



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>gb|AC102849.5| Mus musculus, clone RP24-423P7, complete sequence
          Length = 162547

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 321    ggaatgagaaactggggagg 340
              ||||||||||||||||||||
Sbjct: 135891 ggaatgagaaactggggagg 135872



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>emb|BX276110.5| Human DNA sequence from clone RP11-218L14 on chromosome X Contains the
              gene for a novel protein identical to coagulation factor
              VIII-associated (intronic transcript) F8A, the H2AFB gene
              for member B of the H2A histone family, two novel genes,
              the 3' end of the TMLHE gene for epsilon trimethyllysine
              hydroxylase and two CpG islands, complete sequence
          Length = 147878

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 3      gacaaactgagagccatatcataa 26
              |||||||||||||||| |||||||
Sbjct: 120587 gacaaactgagagccaaatcataa 120610



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>emb|AL359835.10| Human DNA sequence from clone RP11-191J5 on chromosome 1q31.1-31.3
             Contains STSs and GSSs, complete sequence
          Length = 172747

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 3     gacaaactgagagccatatcataa 26
             |||||||||||||||| |||||||
Sbjct: 86218 gacaaactgagagccaaatcataa 86241



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>emb|AL354896.16| Human DNA sequence from clone RP11-512M17 on chromosome 13, complete
              sequence
          Length = 209743

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 130    actgggcaaatgaatgacaa 149
              ||||||||||||||||||||
Sbjct: 188173 actgggcaaatgaatgacaa 188154



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>emb|Y07760.1|CAV1GENOM Canine adenovirus type 1 complete genome
          Length = 30536

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 96    tgtgcaaggaaaacatacag 115
             ||||||||||||||||||||
Sbjct: 15713 tgtgcaaggaaaacatacag 15694



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>emb|X02537.1|HSHEPEXR Human mRNA for serum beta-glycoprotein hemopexin
          Length = 1485

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 324  atgagaaactggggaggtgg 343
            ||||||||||||||||||||
Sbjct: 1458 atgagaaactggggaggtgg 1439



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>gb|AC010032.10| Drosophila melanogaster 3L BAC RP98-2N23 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 192399

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 375   ctgctgcggcaaaggatgct 394
             ||||||||||||||||||||
Sbjct: 42571 ctgctgcggcaaaggatgct 42552



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>gb|AY122170.1| Drosophila melanogaster LD28815 full insert cDNA
          Length = 6352

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 375  ctgctgcggcaaaggatgct 394
            ||||||||||||||||||||
Sbjct: 2436 ctgctgcggcaaaggatgct 2417



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>emb|CR617755.1| full-length cDNA clone CS0DM004YJ20 of Fetal liver of Homo sapiens
            (human)
          Length = 1547

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 324  atgagaaactggggaggtgg 343
            ||||||||||||||||||||
Sbjct: 1535 atgagaaactggggaggtgg 1516



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>emb|CR614628.1| full-length cDNA clone CS0DF006YI22 of Fetal brain of Homo sapiens
            (human)
          Length = 1366

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 324  atgagaaactggggaggtgg 343
            ||||||||||||||||||||
Sbjct: 1350 atgagaaactggggaggtgg 1331



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>emb|CR611907.1| full-length cDNA clone CS0DJ010YE24 of T cells (Jurkat cell line) Cot
            10-normalized of Homo sapiens (human)
          Length = 1547

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 324  atgagaaactggggaggtgg 343
            ||||||||||||||||||||
Sbjct: 1533 atgagaaactggggaggtgg 1514



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>gb|AC084337.7| Homo sapiens chromosome 11, clone CTD-2010I16, complete sequence
          Length = 112295

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 324   atgagaaactggggaggtgg 343
             ||||||||||||||||||||
Sbjct: 19892 atgagaaactggggaggtgg 19911



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>emb|CR601115.1| full-length cDNA clone CS0DF010YK01 of Fetal brain of Homo sapiens
            (human)
          Length = 1051

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 324  atgagaaactggggaggtgg 343
            ||||||||||||||||||||
Sbjct: 1026 atgagaaactggggaggtgg 1007



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>gb|AC092923.8| Homo sapiens 3 BAC RP11-145K15 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 150216

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 4     acaaactgagagccatatcataaa 27
             |||||||||||| |||||||||||
Sbjct: 20202 acaaactgagagacatatcataaa 20179



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>emb|CR595529.1| full-length cDNA clone CS0DM007YC08 of Fetal liver of Homo sapiens
            (human)
          Length = 1542

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 324  atgagaaactggggaggtgg 343
            ||||||||||||||||||||
Sbjct: 1528 atgagaaactggggaggtgg 1509



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>gb|AC068733.12| Homo sapiens chromosome 11, clone RP11-304C12, complete sequence
          Length = 191656

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 324    atgagaaactggggaggtgg 343
              ||||||||||||||||||||
Sbjct: 169479 atgagaaactggggaggtgg 169498



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>gb|AC110989.3| Homo sapiens 3q BAC RP11-15M16 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 161520

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 3      gacaaactgagagccatatcataa 26
              |||||||||||||||| |||||||
Sbjct: 132926 gacaaactgagagccaaatcataa 132949



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>ref|NM_167844.1| Drosophila melanogaster CG32479-RA (CG32479), mRNA
          Length = 6356

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 375  ctgctgcggcaaaggatgct 394
            ||||||||||||||||||||
Sbjct: 2444 ctgctgcggcaaaggatgct 2425



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>gb|AC002332.3| Arabidopsis thaliana chromosome 2 clone F4P9 map ve015, complete
             sequence
          Length = 152593

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 187   gaagaagtcgaacaagagctacaacaac 214
             |||||||||||| |||||| ||||||||
Sbjct: 86006 gaagaagtcgaagaagagcaacaacaac 85979



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>gb|AY093730.1| Arabidopsis thaliana At2g33480/F4P9.25 mRNA, complete cds
          Length = 807

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 187 gaagaagtcgaacaagagctacaacaac 214
           |||||||||||| |||||| ||||||||
Sbjct: 710 gaagaagtcgaagaagagcaacaacaac 683



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>gb|DP000051.1| Carollia perspicillata target 126 genomic scaffold
          Length = 501879

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 25     aaaaagaatgatcagccaaa 44
              ||||||||||||||||||||
Sbjct: 441738 aaaaagaatgatcagccaaa 441719



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>gb|AF410299.1|AF410299 Arabidopsis thaliana At2g33480/F4P9.25 mRNA, complete cds
          Length = 918

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 187 gaagaagtcgaacaagagctacaacaac 214
           |||||||||||| |||||| ||||||||
Sbjct: 768 gaagaagtcgaagaagagcaacaacaac 741



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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 138      aatgaatgacaagagaaacaacaa 161
                |||||||||||||| |||||||||
Sbjct: 10956138 aatgaatgacaagataaacaacaa 10956115



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>gb|AF325080.1|AF325080 Arabidopsis thaliana putative NAM (no apical meristem)-like protein
           (At2g33480) mRNA, complete cds
          Length = 807

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 187 gaagaagtcgaacaagagctacaacaac 214
           |||||||||||| |||||| ||||||||
Sbjct: 710 gaagaagtcgaagaagagcaacaacaac 683



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>emb|BX821081.1|CNS0AA5L Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL12ZG06 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 977

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 187 gaagaagtcgaacaagagctacaacaac 214
           |||||||||||| |||||| ||||||||
Sbjct: 778 gaagaagtcgaagaagagcaacaacaac 751



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>gb|AC087565.5| Homo sapiens chromosome 16 clone RP11-53L24, complete sequence
          Length = 192937

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 40     ccaaaccatacagaagttgc 59
              ||||||||||||||||||||
Sbjct: 111514 ccaaaccatacagaagttgc 111495



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>gb|AC121758.14| Homo sapiens 12 BAC RP11-74M13 (Roswell Park Cancer Institute Human
            BAC Library) complete sequence
          Length = 130479

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 3    gacaaactgagagccatatcataa 26
            |||||||||||||||| |||||||
Sbjct: 7842 gacaaactgagagccaaatcataa 7819



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>gb|AC007736.3| Homo sapiens BAC clone RP11-15J24 from 2, complete sequence
          Length = 172476

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 321   ggaatgagaaactggggagg 340
             ||||||||||||||||||||
Sbjct: 29827 ggaatgagaaactggggagg 29808



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>dbj|AK174827.1| Ciona intestinalis cDNA, clone:cilv082m04, full insert sequence
          Length = 1630

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 195  cgaacaagagctacaacaac 214
            ||||||||||||||||||||
Sbjct: 1450 cgaacaagagctacaacaac 1469



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>dbj|AP005106.6| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBb0091I19
          Length = 126544

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 138   aatgaatgacaagagaaacaacaa 161
             |||||||||||||| |||||||||
Sbjct: 18081 aatgaatgacaagataaacaacaa 18058



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>dbj|AP005766.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:OSJNBa0028O21
          Length = 134543

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 138    aatgaatgacaagagaaacaacaa 161
              |||||||||||||| |||||||||
Sbjct: 132513 aatgaatgacaagataaacaacaa 132490



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>dbj|AB113354.2| Sus scrofa 433 kb genomic segment, located between the non-classical
             and classical SLA class I gene cluster, clone: BAC 499E6
          Length = 154749

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 8     actgagagccatatcataaaaaga 31
             |||||||||||||||| |||||||
Sbjct: 71961 actgagagccatatcagaaaaaga 71938



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>gb|AC006600.4|AC006600 Homo sapiens chromosome 17, clone hRPK.502_F_1, complete sequence
          Length = 170453

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 359   tgaaaaaatggatgtactgc 378
             ||||||||||||||||||||
Sbjct: 49057 tgaaaaaatggatgtactgc 49076



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>gb|AE003469.3| Drosophila melanogaster chromosome 3L, section 3 of 83 of the complete
              sequence
          Length = 286515

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 375    ctgctgcggcaaaggatgct 394
              ||||||||||||||||||||
Sbjct: 261182 ctgctgcggcaaaggatgct 261163



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>gb|AC131028.13| Mus musculus chromosome 3, clone RP23-293M23, complete sequence
          Length = 264928

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 321    ggaatgagaaactggggagg 340
              ||||||||||||||||||||
Sbjct: 179241 ggaatgagaaactggggagg 179260



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>emb|AL596422.2|HSAU55C17 Homo sapiens chromosome X clone cos55C17 map Xq28, complete sequence
          Length = 34045

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 3    gacaaactgagagccatatcataa 26
            |||||||||||||||| |||||||
Sbjct: 5077 gacaaactgagagccaaatcataa 5100



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>gb|AC134907.5| Mus musculus BAC clone RP23-362K17 from 8, complete sequence
          Length = 186341

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                
Query: 265  aacaaacaaagagccacacaaaaagagggacatatt 300
            |||||||||| |  || |||||||||||||||||||
Sbjct: 6302 aacaaacaaacaaacaaacaaaaagagggacatatt 6337



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>dbj|AP006627.1| Bacillus clausii KSM-K16 DNA, complete genome
          Length = 4303871

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 429     caatacattcatttcactgg 448
               ||||||||||||||||||||
Sbjct: 1133282 caatacattcatttcactgg 1133301



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>gb|U55001.1|CAU55001 Canine adenovirus type 1 E1A protein, small T-antigen, large T-antigen,
             protein IX, IVa2 protein, DNA polymerase, pTP, 52-55K
             protein, pIIIa, penton base protein, pVII protein, pV
             protein, Mu peptide precursor, pVI protein, viral protein
             II, endoproteinase, E2A-DBP, 100 kD protein, L4-22kD
             protein, L4-33 kD protein, pVIII, virion component IV,
             U-exon, E4 orf5, E4 orf4, E4 orf3, E4 orf2, and E4 orf1
             genes, complete cds
          Length = 30288

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 96    tgtgcaaggaaaacatacag 115
             ||||||||||||||||||||
Sbjct: 15752 tgtgcaaggaaaacatacag 15733



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>gb|M36803.1|HUMHXMA07 Human hemopexin gene, exon 10
          Length = 629

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 324 atgagaaactggggaggtgg 343
           ||||||||||||||||||||
Sbjct: 441 atgagaaactggggaggtgg 422



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>emb|AL732433.7| Mouse DNA sequence from clone RP23-349N21 on chromosome X, complete
              sequence
          Length = 196655

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 72     tacaaaaagtaaatataccaacca 95
              ||||||||| ||||||||||||||
Sbjct: 148568 tacaaaaaggaaatataccaacca 148591



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>gb|J03048.1|HUMHXMA Huma hemopexin mRNA, 3' end
          Length = 1546

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 324  atgagaaactggggaggtgg 343
            ||||||||||||||||||||
Sbjct: 1519 atgagaaactggggaggtgg 1500


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,904,234
Number of Sequences: 3902068
Number of extensions: 4904234
Number of successful extensions: 90930
Number of sequences better than 10.0: 60
Number of HSP's better than 10.0 without gapping: 57
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 90751
Number of HSP's gapped (non-prelim): 179
length of query: 456
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 434
effective length of database: 17,147,199,772
effective search space: 7441884701048
effective search space used: 7441884701048
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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