Clone Name | rbart24b02 |
---|---|
Clone Library Name | barley_pub |
>ref|XM_482883.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1128 Score = 149 bits (75), Expect = 9e-33 Identities = 210/255 (82%) Strand = Plus / Minus Query: 176 aaggccggaacatgctgatatctctgctgttcacctcctgacgcggcctagcgttcttct 235 |||||||||| ||| ||| |||||| |||||||| ||||| | ||||| ||||| |||| Sbjct: 875 aaggccggaaaatggagatgtctctgttgttcaccgcctgaaggggcctcgcgttgttct 816 Query: 236 ccatgtcgtcatggacggcttcccgaagaagctccagctggtgcctcgacaccgtgcgaa 295 |||| || ||||| || ||||||| ||||| || ||||| | ||||||||| ||||||| Sbjct: 815 ccatttcatcatgcacagcttccctgagaaggtcgagctgatacctcgacacggtgcgaa 756 Query: 296 ccctcttgacgatggtccagatgacaccttctgcgcatggtggggtggtgagggatccca 355 |||||||||| || ||||||| || || | | ||| || || |||||||| || |||| Sbjct: 755 ccctcttgacaatcgtccagaccaccccctgcgtgcaaggcggcgtggtgagcgacccca 696 Query: 356 cgtagcggtagtacacgctggccttgcccctggcgcccctcgggtccatcatccccatct 415 |||||||||||||||||||||| | ||||| || |||||||| || ||||| |||| || Sbjct: 695 tgtagcggtagtacacgctggccctaccccttgcacccctcggatcaatcatgcccacct 636 Query: 416 tctcctccctatcct 430 |||||||||| |||| Sbjct: 635 tctcctccctgtcct 621
>dbj|AK059773.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-204-A01, full insert sequence Length = 1128 Score = 149 bits (75), Expect = 9e-33 Identities = 210/255 (82%) Strand = Plus / Minus Query: 176 aaggccggaacatgctgatatctctgctgttcacctcctgacgcggcctagcgttcttct 235 |||||||||| ||| ||| |||||| |||||||| ||||| | ||||| ||||| |||| Sbjct: 875 aaggccggaaaatggagatgtctctgttgttcaccgcctgaaggggcctcgcgttgttct 816 Query: 236 ccatgtcgtcatggacggcttcccgaagaagctccagctggtgcctcgacaccgtgcgaa 295 |||| || ||||| || ||||||| ||||| || ||||| | ||||||||| ||||||| Sbjct: 815 ccatttcatcatgcacagcttccctgagaaggtcgagctgatacctcgacacggtgcgaa 756 Query: 296 ccctcttgacgatggtccagatgacaccttctgcgcatggtggggtggtgagggatccca 355 |||||||||| || ||||||| || || | | ||| || || |||||||| || |||| Sbjct: 755 ccctcttgacaatcgtccagaccaccccctgcgtgcaaggcggcgtggtgagcgacccca 696 Query: 356 cgtagcggtagtacacgctggccttgcccctggcgcccctcgggtccatcatccccatct 415 |||||||||||||||||||||| | ||||| || |||||||| || ||||| |||| || Sbjct: 695 tgtagcggtagtacacgctggccctaccccttgcacccctcggatcaatcatgcccacct 636 Query: 416 tctcctccctatcct 430 |||||||||| |||| Sbjct: 635 tctcctccctgtcct 621
>ref|XM_482884.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1040 Score = 97.6 bits (49), Expect = 3e-17 Identities = 118/141 (83%) Strand = Plus / Minus Query: 176 aaggccggaacatgctgatatctctgctgttcacctcctgacgcggcctagcgttcttct 235 |||||||||| ||| ||| |||||| |||||||| ||||| | ||||| ||||| |||| Sbjct: 787 aaggccggaaaatggagatgtctctgttgttcaccgcctgaaggggcctcgcgttgttct 728 Query: 236 ccatgtcgtcatggacggcttcccgaagaagctccagctggtgcctcgacaccgtgcgaa 295 |||| || ||||| || ||||||| ||||| || ||||| | ||||||||| ||||||| Sbjct: 727 ccatttcatcatgcacagcttccctgagaaggtcgagctgatacctcgacacggtgcgaa 668 Query: 296 ccctcttgacgatggtccaga 316 |||||||||| || ||||||| Sbjct: 667 ccctcttgacaatcgtccaga 647
>dbj|AK060039.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-304-B06, full insert sequence Length = 1043 Score = 97.6 bits (49), Expect = 3e-17 Identities = 118/141 (83%) Strand = Plus / Minus Query: 176 aaggccggaacatgctgatatctctgctgttcacctcctgacgcggcctagcgttcttct 235 |||||||||| ||| ||| |||||| |||||||| ||||| | ||||| ||||| |||| Sbjct: 790 aaggccggaaaatggagatgtctctgttgttcaccgcctgaaggggcctcgcgttgttct 731 Query: 236 ccatgtcgtcatggacggcttcccgaagaagctccagctggtgcctcgacaccgtgcgaa 295 |||| || ||||| || ||||||| ||||| || ||||| | ||||||||| ||||||| Sbjct: 730 ccatttcatcatgcacagcttccctgagaaggtcgagctgatacctcgacacggtgcgaa 671 Query: 296 ccctcttgacgatggtccaga 316 |||||||||| || ||||||| Sbjct: 670 ccctcttgacaatcgtccaga 650
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 85.7 bits (43), Expect = 1e-13 Identities = 79/91 (86%) Strand = Plus / Plus Query: 340 gtggtgagggatcccacgtagcggtagtacacgctggccttgcccctggcgcccctcggg 399 |||||||| || |||| |||||||||||||||||||||| | ||||| || |||||||| Sbjct: 23111053 gtggtgagcgaccccatgtagcggtagtacacgctggccctaccccttgcacccctcgga 23111112 Query: 400 tccatcatccccatcttctcctccctatcct 430 || ||||| |||| |||||||||||| |||| Sbjct: 23111113 tcaatcatgcccaccttctcctccctgtcct 23111143 Score = 48.1 bits (24), Expect = 0.026 Identities = 54/64 (84%) Strand = Plus / Minus Query: 309 ggtccagatgacaccttctgcgcatggtggggtggtgagggatcccacgtagcggtagta 368 |||||||||||| || || | ||| ||||| ||||| | ||| |||| |||||||||||| Sbjct: 20277128 ggtccagatgactccctcagtgcaaggtggtgtggtaaaggagcccatgtagcggtagta 20277069 Query: 369 cacg 372 |||| Sbjct: 20277068 cacg 20277065 Score = 40.1 bits (20), Expect = 6.3 Identities = 53/64 (82%) Strand = Plus / Minus Query: 309 ggtccagatgacaccttctgcgcatggtggggtggtgagggatcccacgtagcggtagta 368 |||||||||||| || || | ||| ||||| ||||| | ||| |||| |||||| ||||| Sbjct: 20306436 ggtccagatgaccccctccgtgcaaggtggtgtggtaaaggagcccatgtagcgatagta 20306377 Query: 369 cacg 372 |||| Sbjct: 20306376 cacg 20306373
>dbj|AP004693.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0461F06 Length = 147891 Score = 85.7 bits (43), Expect = 1e-13 Identities = 79/91 (86%) Strand = Plus / Plus Query: 340 gtggtgagggatcccacgtagcggtagtacacgctggccttgcccctggcgcccctcggg 399 |||||||| || |||| |||||||||||||||||||||| | ||||| || |||||||| Sbjct: 34152 gtggtgagcgaccccatgtagcggtagtacacgctggccctaccccttgcacccctcgga 34211 Query: 400 tccatcatccccatcttctcctccctatcct 430 || ||||| |||| |||||||||||| |||| Sbjct: 34212 tcaatcatgcccaccttctcctccctgtcct 34242
>emb|AJ843247.1| Physcomitrella patens mRNA for carbonic anhydrase-like protein precursor (calp gene) Length = 1272 Score = 65.9 bits (33), Expect = 1e-07 Identities = 42/45 (93%) Strand = Plus / Minus Query: 311 tccagatgacaccttctgcgcatggtggggtggtgagggatccca 355 ||||| ||||||| || |||||||||||||||||||||||||||| Sbjct: 764 tccaggtgacaccctccgcgcatggtggggtggtgagggatccca 720
>ref|NM_188951.1| Oryza sativa (japonica cultivar-group), mRNA Length = 831 Score = 52.0 bits (26), Expect = 0.002 Identities = 74/90 (82%) Strand = Plus / Minus Query: 283 gacaccgtgcgaaccctcttgacgatggtccagatgacaccttctgcgcatggtggggtg 342 ||||| ||||| ||| || |||| | |||||||||||| || || | ||| ||||| ||| Sbjct: 704 gacacggtgcgcaccttcctgacaacggtccagatgactccctcagtgcaaggtggtgtg 645 Query: 343 gtgagggatcccacgtagcggtagtacacg 372 || | ||| |||| |||||||||||||||| Sbjct: 644 gtaaaggagcccatgtagcggtagtacacg 615
>dbj|AP005537.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0056L09 Length = 152910 Score = 48.1 bits (24), Expect = 0.026 Identities = 54/64 (84%) Strand = Plus / Minus Query: 309 ggtccagatgacaccttctgcgcatggtggggtggtgagggatcccacgtagcggtagta 368 |||||||||||| || || | ||| ||||| ||||| | ||| |||| |||||||||||| Sbjct: 24876 ggtccagatgactccctcagtgcaaggtggtgtggtaaaggagcccatgtagcggtagta 24817 Query: 369 cacg 372 |||| Sbjct: 24816 cacg 24813 Score = 40.1 bits (20), Expect = 6.3 Identities = 53/64 (82%) Strand = Plus / Minus Query: 309 ggtccagatgacaccttctgcgcatggtggggtggtgagggatcccacgtagcggtagta 368 |||||||||||| || || | ||| ||||| ||||| | ||| |||| |||||| ||||| Sbjct: 54184 ggtccagatgaccccctccgtgcaaggtggtgtggtaaaggagcccatgtagcgatagta 54125 Query: 369 cacg 372 |||| Sbjct: 54124 cacg 54121
>dbj|AP005301.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0077M12 Length = 145337 Score = 48.1 bits (24), Expect = 0.026 Identities = 54/64 (84%) Strand = Plus / Minus Query: 309 ggtccagatgacaccttctgcgcatggtggggtggtgagggatcccacgtagcggtagta 368 |||||||||||| || || | ||| ||||| ||||| | ||| |||| |||||||||||| Sbjct: 142914 ggtccagatgactccctcagtgcaaggtggtgtggtaaaggagcccatgtagcggtagta 142855 Query: 369 cacg 372 |||| Sbjct: 142854 cacg 142851
>gb|AF131303.1|AF131303 Actinomadura sp. IM-3889 16S ribosomal RNA gene, partial sequence Length = 837 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 324 ttctgcgcatggtggggtggtg 345 |||||||||||||||||||||| Sbjct: 144 ttctgcgcatggtggggtggtg 165
>ref|NM_117595.3| Arabidopsis thaliana metal ion binding AT4G15080 mRNA, complete cds Length = 2876 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 263 gaagctccagctggtgcctcg 283 ||||||||||||||||||||| Sbjct: 1296 gaagctccagctggtgcctcg 1276
>gb|AY123080.1| Griffithsia japonica carbonate dehydratase mRNA, partial cds Length = 450 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 337 ggggtggtgagggatcccacgtagc 361 ||||||||||||||||| ||||||| Sbjct: 233 ggggtggtgagggatccgacgtagc 209
>gb|AY123054.1| Griffithsia japonica carbonic anhydrase mRNA, complete cds Length = 900 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 337 ggggtggtgagggatcccacgtagc 361 ||||||||||||||||| ||||||| Sbjct: 737 ggggtggtgagggatccgacgtagc 713
>gb|AY123050.1| Griffithsia japonica carbonate dehydratase mRNA, complete cds Length = 780 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 337 ggggtggtgagggatcccacgtagc 361 ||||||||||||||||| ||||||| Sbjct: 596 ggggtggtgagggatccgacgtagc 572
>gb|BT008794.1| Arabidopsis thaliana At4g15680 gene, complete cds Length = 2157 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 263 gaagctccagctggtgcctcg 283 ||||||||||||||||||||| Sbjct: 962 gaagctccagctggtgcctcg 942
>emb|Z97337.2|ATFCA2 Arabidopsis thaliana DNA chromosome 4, ESSA I FCA contig fragment No. 2 Length = 202860 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 263 gaagctccagctggtgcctcg 283 ||||||||||||||||||||| Sbjct: 175457 gaagctccagctggtgcctcg 175477
>gb|AY099860.1| Arabidopsis thaliana unknown protein (At4g15080) mRNA, complete cds Length = 2872 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 263 gaagctccagctggtgcctcg 283 ||||||||||||||||||||| Sbjct: 1296 gaagctccagctggtgcctcg 1276
>emb|AL161540.2|ATCHRIV40 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 40 Length = 197405 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 263 gaagctccagctggtgcctcg 283 ||||||||||||||||||||| Sbjct: 120911 gaagctccagctggtgcctcg 120931
>ref|XM_482463.1| Oryza sativa (japonica cultivar-group), mRNA Length = 831 Score = 40.1 bits (20), Expect = 6.3 Identities = 53/64 (82%) Strand = Plus / Minus Query: 309 ggtccagatgacaccttctgcgcatggtggggtggtgagggatcccacgtagcggtagta 368 |||||||||||| || || | ||| ||||| ||||| | ||| |||| |||||| ||||| Sbjct: 678 ggtccagatgaccccctccgtgcaaggtggtgtggtaaaggagcccatgtagcgatagta 619 Query: 369 cacg 372 |||| Sbjct: 618 cacg 615
>gb|AC169819.2| Rhesus Macaque BAC CH250-132C22 (Children's Hospital Oakland Research Institute Rhesus macaque Adult Male BAC Library) complete sequence Length = 176070 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 91 atagccatgtacataaaaaa 110 |||||||||||||||||||| Sbjct: 122183 atagccatgtacataaaaaa 122202
>gb|AC084218.6| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0001A07, complete sequence Length = 164898 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 79 tacaaaaatgatatagccatgtac 102 |||||||||||||||| ||||||| Sbjct: 34827 tacaaaaatgatatagacatgtac 34804
>gb|AC163770.3| Pan troglodytes BAC clone CH251-4E4 from chromosome unknown, complete sequence Length = 210071 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 196 tctctgctgttcacctcctg 215 |||||||||||||||||||| Sbjct: 32516 tctctgctgttcacctcctg 32497
>emb|AL590995.14| Human DNA sequence from clone RP11-475B22 on chromosome 6, complete sequence Length = 113362 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 200 tgctgttcacctcctgacgc 219 |||||||||||||||||||| Sbjct: 53117 tgctgttcacctcctgacgc 53136
>emb|BX537692.1|HSM805765 Homo sapiens genomic DNA; cDNA DKFZp686F06111 (from clone DKFZp686F06111) Length = 5967 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 157 caatgtctattttgctcaaaaggc 180 ||||| |||||||||||||||||| Sbjct: 2136 caatggctattttgctcaaaaggc 2113
>emb|BX469896.14| Zebrafish DNA sequence from clone DKEY-52L6 in linkage group 12, complete sequence Length = 157056 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 73 actacgtacaaaaatgatat 92 |||||||||||||||||||| Sbjct: 92810 actacgtacaaaaatgatat 92829
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 371 cgctggccttgcccctggcgcccc 394 ||||||||||| |||||||||||| Sbjct: 5294567 cgctggccttgtccctggcgcccc 5294544
>gb|AC160648.3| Pan troglodytes BAC clone CH251-568C23 from chromosome unknown, complete sequence Length = 205923 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 196 tctctgctgttcacctcctg 215 |||||||||||||||||||| Sbjct: 25818 tctctgctgttcacctcctg 25799
>gb|AF383169.1|AF383169 Pan troglodytes leukocyte immunoglobulin-like receptor e (LIRe) mRNA, complete cds Length = 1889 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 196 tctctgctgttcacctcctg 215 |||||||||||||||||||| Sbjct: 1496 tctctgctgttcacctcctg 1477
>gb|AF383161.1|AF383161 Pan troglodytes immunoglobulin-like transcript 1 (ILT1) mRNA, complete cds Length = 1665 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 196 tctctgctgttcacctcctg 215 |||||||||||||||||||| Sbjct: 1474 tctctgctgttcacctcctg 1455
>ref|XM_685211.1| PREDICTED: Danio rerio similar to CG31151-PB, isoform B (LOC561812), mRNA Length = 8415 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 401 ccatcatccccatcttctcctccctatc 428 ||||||||||| |||||||| ||||||| Sbjct: 448 ccatcatccccttcttctccaccctatc 475
>gb|AC175823.2| Pan troglodytes BAC clone CH251-175P6 from chromosome unknown, complete sequence Length = 176244 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 196 tctctgctgttcacctcctg 215 |||||||||||||||||||| Sbjct: 58503 tctctgctgttcacctcctg 58484
>gb|AC016779.5| Genomic sequence for Oryza sativa clone 10N6, complete sequence Length = 140234 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 79 tacaaaaatgatatagccatgtac 102 |||||||||||||||| ||||||| Sbjct: 27576 tacaaaaatgatatagacatgtac 27599
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 79 tacaaaaatgatatagccatgtac 102 |||||||||||||||| ||||||| Sbjct: 2840216 tacaaaaatgatatagacatgtac 2840193
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 332 atggtggggtggtgagggat 351 |||||||||||||||||||| Sbjct: 16302061 atggtggggtggtgagggat 16302080
>gb|AC161615.4| Pan troglodytes BAC clone CH251-549K12 from chromosome 7, complete sequence Length = 193692 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 atagccatgtacataaaaaa 110 |||||||||||||||||||| Sbjct: 135725 atagccatgtacataaaaaa 135706
>gb|AC159039.2| Pan troglodytes BAC clone CH251-65A20 from chromosome unknown, complete sequence Length = 170427 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 atagccatgtacataaaaaa 110 |||||||||||||||||||| Sbjct: 3962 atagccatgtacataaaaaa 3943
>ref|NM_001009044.1| Pan troglodytes leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 2 (LILRA2), mRNA Length = 1665 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 196 tctctgctgttcacctcctg 215 |||||||||||||||||||| Sbjct: 1474 tctctgctgttcacctcctg 1455
>ref|NM_001009056.1| Pan troglodytes leukocyte immunoglobulin-like receptor e (LIRe), mRNA Length = 1889 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 196 tctctgctgttcacctcctg 215 |||||||||||||||||||| Sbjct: 1496 tctctgctgttcacctcctg 1477
>gb|AC159033.2| Pan troglodytes BAC clone CH251-339G2 from chromosome unknown, complete sequence Length = 152653 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 196 tctctgctgttcacctcctg 215 |||||||||||||||||||| Sbjct: 97024 tctctgctgttcacctcctg 97005
>dbj|AP006237.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBb0008D07 Length = 156874 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 332 atggtggggtggtgagggat 351 |||||||||||||||||||| Sbjct: 64138 atggtggggtggtgagggat 64157
>dbj|AP000648.5| Homo sapiens genomic DNA, chromosome 11 clone:CMB9-76D16, complete sequence Length = 149744 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 157 caatgtctattttgctcaaaaggc 180 ||||| |||||||||||||||||| Sbjct: 111387 caatggctattttgctcaaaaggc 111410
>dbj|AP002364.4| Homo sapiens genomic DNA, chromosome 11 clone:RP11-121L10, complete sequence Length = 165703 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 157 caatgtctattttgctcaaaaggc 180 ||||| |||||||||||||||||| Sbjct: 4105 caatggctattttgctcaaaaggc 4128
>emb|AL607066.23| Mouse DNA sequence from clone RP23-406N5 on chromosome 4, complete sequence Length = 194837 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 406 atccccatcttctcctccct 425 |||||||||||||||||||| Sbjct: 71340 atccccatcttctcctccct 71321
>emb|AL132992.4|CNS01DTZ Human chromosome 14 DNA sequence BAC C-2268P10 of library CalTech-D from chromosome 14 of Homo sapiens (Human), complete sequence Length = 133186 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 407 tccccatcttctcctccctatcct 430 ||||||||||||||||||| |||| Sbjct: 13619 tccccatcttctcctccctctcct 13596
>emb|AL118555.6|CNS01DRS Human chromosome 14 DNA sequence BAC C-2011M8 of library CalTech-D from chromosome 14 of Homo sapiens (Human), complete sequence Length = 122552 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 407 tccccatcttctcctccctatcct 430 ||||||||||||||||||| |||| Sbjct: 35109 tccccatcttctcctccctctcct 35132 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,811,034 Number of Sequences: 3902068 Number of extensions: 3811034 Number of successful extensions: 77341 Number of sequences better than 10.0: 46 Number of HSP's better than 10.0 without gapping: 46 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 77158 Number of HSP's gapped (non-prelim): 183 length of query: 466 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 444 effective length of database: 17,147,199,772 effective search space: 7613356698768 effective search space used: 7613356698768 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)