ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart24b02
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ref|XM_482883.1| Oryza sativa (japonica cultivar-group), mRNA 149 9e-33
2dbj|AK059773.1| Oryza sativa (japonica cultivar-group) cDNA clon... 149 9e-33
3ref|XM_482884.1| Oryza sativa (japonica cultivar-group), mRNA 98 3e-17
4dbj|AK060039.1| Oryza sativa (japonica cultivar-group) cDNA clon... 98 3e-17
5dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 86 1e-13
6dbj|AP004693.3| Oryza sativa (japonica cultivar-group) genomic D... 86 1e-13
7emb|AJ843247.1| Physcomitrella patens mRNA for carbonic anhydras... 66 1e-07
8ref|NM_188951.1| Oryza sativa (japonica cultivar-group), mRNA 52 0.002
9dbj|AP005537.3| Oryza sativa (japonica cultivar-group) genomic D... 48 0.026
10dbj|AP005301.3| Oryza sativa (japonica cultivar-group) genomic D... 48 0.026
11gb|AF131303.1|AF131303 Actinomadura sp. IM-3889 16S ribosomal RN... 44 0.40
12ref|NM_117595.3| Arabidopsis thaliana metal ion binding AT4G1508... 42 1.6
13gb|AY123080.1| Griffithsia japonica carbonate dehydratase mRNA, ... 42 1.6
14gb|AY123054.1| Griffithsia japonica carbonic anhydrase mRNA, com... 42 1.6
15gb|AY123050.1| Griffithsia japonica carbonate dehydratase mRNA, ... 42 1.6
16gb|BT008794.1| Arabidopsis thaliana At4g15680 gene, complete cds 42 1.6
17emb|Z97337.2|ATFCA2 Arabidopsis thaliana DNA chromosome 4, ESSA ... 42 1.6
18gb|AY099860.1| Arabidopsis thaliana unknown protein (At4g15080) ... 42 1.6
19emb|AL161540.2|ATCHRIV40 Arabidopsis thaliana DNA chromosome 4, ... 42 1.6
20ref|XM_482463.1| Oryza sativa (japonica cultivar-group), mRNA 40 6.3
21gb|AC169819.2| Rhesus Macaque BAC CH250-132C22 (Children's Hosp... 40 6.3
22gb|AC084218.6| Oryza sativa (japonica cultivar-group) chromosome... 40 6.3
23gb|AC163770.3| Pan troglodytes BAC clone CH251-4E4 from chromoso... 40 6.3
24emb|AL590995.14| Human DNA sequence from clone RP11-475B22 on ch... 40 6.3
25emb|BX537692.1|HSM805765 Homo sapiens genomic DNA; cDNA DKFZp686... 40 6.3
26emb|BX469896.14| Zebrafish DNA sequence from clone DKEY-52L6 in ... 40 6.3
27gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome 40 6.3
28gb|AC160648.3| Pan troglodytes BAC clone CH251-568C23 from chrom... 40 6.3
29gb|AF383169.1|AF383169 Pan troglodytes leukocyte immunoglobulin-... 40 6.3
30gb|AF383161.1|AF383161 Pan troglodytes immunoglobulin-like trans... 40 6.3
31ref|XM_685211.1| PREDICTED: Danio rerio similar to CG31151-PB, i... 40 6.3
32gb|AC175823.2| Pan troglodytes BAC clone CH251-175P6 from chromo... 40 6.3
33gb|AC016779.5| Genomic sequence for Oryza sativa clone 10N6, com... 40 6.3
34dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.3
35dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.3
36gb|AC161615.4| Pan troglodytes BAC clone CH251-549K12 from chrom... 40 6.3
37gb|AC159039.2| Pan troglodytes BAC clone CH251-65A20 from chromo... 40 6.3
38ref|NM_001009044.1| Pan troglodytes leukocyte immunoglobulin-lik... 40 6.3
39ref|NM_001009056.1| Pan troglodytes leukocyte immunoglobulin-lik... 40 6.3
40gb|AC159033.2| Pan troglodytes BAC clone CH251-339G2 from chromo... 40 6.3
41dbj|AP006237.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.3
42dbj|AP000648.5| Homo sapiens genomic DNA, chromosome 11 clone:CM... 40 6.3
43dbj|AP002364.4| Homo sapiens genomic DNA, chromosome 11 clone:RP... 40 6.3
44emb|AL607066.23| Mouse DNA sequence from clone RP23-406N5 on chr... 40 6.3
45emb|AL132992.4|CNS01DTZ Human chromosome 14 DNA sequence BAC C-2... 40 6.3
46emb|AL118555.6|CNS01DRS Human chromosome 14 DNA sequence BAC C-2... 40 6.3

>ref|XM_482883.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1128

 Score =  149 bits (75), Expect = 9e-33
 Identities = 210/255 (82%)
 Strand = Plus / Minus

                                                                       
Query: 176 aaggccggaacatgctgatatctctgctgttcacctcctgacgcggcctagcgttcttct 235
           |||||||||| |||  ||| |||||| |||||||| ||||| | ||||| ||||| ||||
Sbjct: 875 aaggccggaaaatggagatgtctctgttgttcaccgcctgaaggggcctcgcgttgttct 816

                                                                       
Query: 236 ccatgtcgtcatggacggcttcccgaagaagctccagctggtgcctcgacaccgtgcgaa 295
           |||| || ||||| || |||||||  ||||| || ||||| | ||||||||| |||||||
Sbjct: 815 ccatttcatcatgcacagcttccctgagaaggtcgagctgatacctcgacacggtgcgaa 756

                                                                       
Query: 296 ccctcttgacgatggtccagatgacaccttctgcgcatggtggggtggtgagggatccca 355
           |||||||||| || |||||||  || || |  | ||| || || |||||||| || ||||
Sbjct: 755 ccctcttgacaatcgtccagaccaccccctgcgtgcaaggcggcgtggtgagcgacccca 696

                                                                       
Query: 356 cgtagcggtagtacacgctggccttgcccctggcgcccctcgggtccatcatccccatct 415
            |||||||||||||||||||||| | ||||| || |||||||| || ||||| |||| ||
Sbjct: 695 tgtagcggtagtacacgctggccctaccccttgcacccctcggatcaatcatgcccacct 636

                          
Query: 416 tctcctccctatcct 430
           |||||||||| ||||
Sbjct: 635 tctcctccctgtcct 621



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>dbj|AK059773.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-204-A01, full
           insert sequence
          Length = 1128

 Score =  149 bits (75), Expect = 9e-33
 Identities = 210/255 (82%)
 Strand = Plus / Minus

                                                                       
Query: 176 aaggccggaacatgctgatatctctgctgttcacctcctgacgcggcctagcgttcttct 235
           |||||||||| |||  ||| |||||| |||||||| ||||| | ||||| ||||| ||||
Sbjct: 875 aaggccggaaaatggagatgtctctgttgttcaccgcctgaaggggcctcgcgttgttct 816

                                                                       
Query: 236 ccatgtcgtcatggacggcttcccgaagaagctccagctggtgcctcgacaccgtgcgaa 295
           |||| || ||||| || |||||||  ||||| || ||||| | ||||||||| |||||||
Sbjct: 815 ccatttcatcatgcacagcttccctgagaaggtcgagctgatacctcgacacggtgcgaa 756

                                                                       
Query: 296 ccctcttgacgatggtccagatgacaccttctgcgcatggtggggtggtgagggatccca 355
           |||||||||| || |||||||  || || |  | ||| || || |||||||| || ||||
Sbjct: 755 ccctcttgacaatcgtccagaccaccccctgcgtgcaaggcggcgtggtgagcgacccca 696

                                                                       
Query: 356 cgtagcggtagtacacgctggccttgcccctggcgcccctcgggtccatcatccccatct 415
            |||||||||||||||||||||| | ||||| || |||||||| || ||||| |||| ||
Sbjct: 695 tgtagcggtagtacacgctggccctaccccttgcacccctcggatcaatcatgcccacct 636

                          
Query: 416 tctcctccctatcct 430
           |||||||||| ||||
Sbjct: 635 tctcctccctgtcct 621



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>ref|XM_482884.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1040

 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 118/141 (83%)
 Strand = Plus / Minus

                                                                       
Query: 176 aaggccggaacatgctgatatctctgctgttcacctcctgacgcggcctagcgttcttct 235
           |||||||||| |||  ||| |||||| |||||||| ||||| | ||||| ||||| ||||
Sbjct: 787 aaggccggaaaatggagatgtctctgttgttcaccgcctgaaggggcctcgcgttgttct 728

                                                                       
Query: 236 ccatgtcgtcatggacggcttcccgaagaagctccagctggtgcctcgacaccgtgcgaa 295
           |||| || ||||| || |||||||  ||||| || ||||| | ||||||||| |||||||
Sbjct: 727 ccatttcatcatgcacagcttccctgagaaggtcgagctgatacctcgacacggtgcgaa 668

                                
Query: 296 ccctcttgacgatggtccaga 316
           |||||||||| || |||||||
Sbjct: 667 ccctcttgacaatcgtccaga 647



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>dbj|AK060039.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-304-B06, full
           insert sequence
          Length = 1043

 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 118/141 (83%)
 Strand = Plus / Minus

                                                                       
Query: 176 aaggccggaacatgctgatatctctgctgttcacctcctgacgcggcctagcgttcttct 235
           |||||||||| |||  ||| |||||| |||||||| ||||| | ||||| ||||| ||||
Sbjct: 790 aaggccggaaaatggagatgtctctgttgttcaccgcctgaaggggcctcgcgttgttct 731

                                                                       
Query: 236 ccatgtcgtcatggacggcttcccgaagaagctccagctggtgcctcgacaccgtgcgaa 295
           |||| || ||||| || |||||||  ||||| || ||||| | ||||||||| |||||||
Sbjct: 730 ccatttcatcatgcacagcttccctgagaaggtcgagctgatacctcgacacggtgcgaa 671

                                
Query: 296 ccctcttgacgatggtccaga 316
           |||||||||| || |||||||
Sbjct: 670 ccctcttgacaatcgtccaga 650



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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 79/91 (86%)
 Strand = Plus / Plus

                                                                            
Query: 340      gtggtgagggatcccacgtagcggtagtacacgctggccttgcccctggcgcccctcggg 399
                |||||||| || |||| |||||||||||||||||||||| | ||||| || |||||||| 
Sbjct: 23111053 gtggtgagcgaccccatgtagcggtagtacacgctggccctaccccttgcacccctcgga 23111112

                                               
Query: 400      tccatcatccccatcttctcctccctatcct 430
                || ||||| |||| |||||||||||| ||||
Sbjct: 23111113 tcaatcatgcccaccttctcctccctgtcct 23111143



 Score = 48.1 bits (24), Expect = 0.026
 Identities = 54/64 (84%)
 Strand = Plus / Minus

                                                                            
Query: 309      ggtccagatgacaccttctgcgcatggtggggtggtgagggatcccacgtagcggtagta 368
                |||||||||||| || || | ||| ||||| ||||| | ||| |||| ||||||||||||
Sbjct: 20277128 ggtccagatgactccctcagtgcaaggtggtgtggtaaaggagcccatgtagcggtagta 20277069

                    
Query: 369      cacg 372
                ||||
Sbjct: 20277068 cacg 20277065



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 53/64 (82%)
 Strand = Plus / Minus

                                                                            
Query: 309      ggtccagatgacaccttctgcgcatggtggggtggtgagggatcccacgtagcggtagta 368
                |||||||||||| || || | ||| ||||| ||||| | ||| |||| |||||| |||||
Sbjct: 20306436 ggtccagatgaccccctccgtgcaaggtggtgtggtaaaggagcccatgtagcgatagta 20306377

                    
Query: 369      cacg 372
                ||||
Sbjct: 20306376 cacg 20306373



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>dbj|AP004693.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0461F06
          Length = 147891

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 79/91 (86%)
 Strand = Plus / Plus

                                                                         
Query: 340   gtggtgagggatcccacgtagcggtagtacacgctggccttgcccctggcgcccctcggg 399
             |||||||| || |||| |||||||||||||||||||||| | ||||| || |||||||| 
Sbjct: 34152 gtggtgagcgaccccatgtagcggtagtacacgctggccctaccccttgcacccctcgga 34211

                                            
Query: 400   tccatcatccccatcttctcctccctatcct 430
             || ||||| |||| |||||||||||| ||||
Sbjct: 34212 tcaatcatgcccaccttctcctccctgtcct 34242



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>emb|AJ843247.1| Physcomitrella patens mRNA for carbonic anhydrase-like protein
           precursor (calp gene)
          Length = 1272

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 42/45 (93%)
 Strand = Plus / Minus

                                                        
Query: 311 tccagatgacaccttctgcgcatggtggggtggtgagggatccca 355
           ||||| ||||||| || ||||||||||||||||||||||||||||
Sbjct: 764 tccaggtgacaccctccgcgcatggtggggtggtgagggatccca 720



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>ref|NM_188951.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 831

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 74/90 (82%)
 Strand = Plus / Minus

                                                                       
Query: 283 gacaccgtgcgaaccctcttgacgatggtccagatgacaccttctgcgcatggtggggtg 342
           ||||| ||||| ||| || |||| | |||||||||||| || || | ||| ||||| |||
Sbjct: 704 gacacggtgcgcaccttcctgacaacggtccagatgactccctcagtgcaaggtggtgtg 645

                                         
Query: 343 gtgagggatcccacgtagcggtagtacacg 372
           || | ||| |||| ||||||||||||||||
Sbjct: 644 gtaaaggagcccatgtagcggtagtacacg 615



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>dbj|AP005537.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OSJNBa0056L09
          Length = 152910

 Score = 48.1 bits (24), Expect = 0.026
 Identities = 54/64 (84%)
 Strand = Plus / Minus

                                                                         
Query: 309   ggtccagatgacaccttctgcgcatggtggggtggtgagggatcccacgtagcggtagta 368
             |||||||||||| || || | ||| ||||| ||||| | ||| |||| ||||||||||||
Sbjct: 24876 ggtccagatgactccctcagtgcaaggtggtgtggtaaaggagcccatgtagcggtagta 24817

                 
Query: 369   cacg 372
             ||||
Sbjct: 24816 cacg 24813



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 53/64 (82%)
 Strand = Plus / Minus

                                                                         
Query: 309   ggtccagatgacaccttctgcgcatggtggggtggtgagggatcccacgtagcggtagta 368
             |||||||||||| || || | ||| ||||| ||||| | ||| |||| |||||| |||||
Sbjct: 54184 ggtccagatgaccccctccgtgcaaggtggtgtggtaaaggagcccatgtagcgatagta 54125

                 
Query: 369   cacg 372
             ||||
Sbjct: 54124 cacg 54121



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>dbj|AP005301.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OSJNBa0077M12
          Length = 145337

 Score = 48.1 bits (24), Expect = 0.026
 Identities = 54/64 (84%)
 Strand = Plus / Minus

                                                                          
Query: 309    ggtccagatgacaccttctgcgcatggtggggtggtgagggatcccacgtagcggtagta 368
              |||||||||||| || || | ||| ||||| ||||| | ||| |||| ||||||||||||
Sbjct: 142914 ggtccagatgactccctcagtgcaaggtggtgtggtaaaggagcccatgtagcggtagta 142855

                  
Query: 369    cacg 372
              ||||
Sbjct: 142854 cacg 142851



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>gb|AF131303.1|AF131303 Actinomadura sp. IM-3889 16S ribosomal RNA gene, partial sequence
          Length = 837

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 324 ttctgcgcatggtggggtggtg 345
           ||||||||||||||||||||||
Sbjct: 144 ttctgcgcatggtggggtggtg 165



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>ref|NM_117595.3| Arabidopsis thaliana metal ion binding AT4G15080 mRNA, complete cds
          Length = 2876

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 263  gaagctccagctggtgcctcg 283
            |||||||||||||||||||||
Sbjct: 1296 gaagctccagctggtgcctcg 1276



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>gb|AY123080.1| Griffithsia japonica carbonate dehydratase mRNA, partial cds
          Length = 450

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 337 ggggtggtgagggatcccacgtagc 361
           ||||||||||||||||| |||||||
Sbjct: 233 ggggtggtgagggatccgacgtagc 209



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>gb|AY123054.1| Griffithsia japonica carbonic anhydrase mRNA, complete cds
          Length = 900

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 337 ggggtggtgagggatcccacgtagc 361
           ||||||||||||||||| |||||||
Sbjct: 737 ggggtggtgagggatccgacgtagc 713



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>gb|AY123050.1| Griffithsia japonica carbonate dehydratase mRNA, complete cds
          Length = 780

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 337 ggggtggtgagggatcccacgtagc 361
           ||||||||||||||||| |||||||
Sbjct: 596 ggggtggtgagggatccgacgtagc 572



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>gb|BT008794.1| Arabidopsis thaliana At4g15680 gene, complete cds
          Length = 2157

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 263 gaagctccagctggtgcctcg 283
           |||||||||||||||||||||
Sbjct: 962 gaagctccagctggtgcctcg 942



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>emb|Z97337.2|ATFCA2 Arabidopsis thaliana DNA chromosome 4, ESSA I FCA contig fragment No. 2
          Length = 202860

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 263    gaagctccagctggtgcctcg 283
              |||||||||||||||||||||
Sbjct: 175457 gaagctccagctggtgcctcg 175477



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>gb|AY099860.1| Arabidopsis thaliana unknown protein (At4g15080) mRNA, complete cds
          Length = 2872

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 263  gaagctccagctggtgcctcg 283
            |||||||||||||||||||||
Sbjct: 1296 gaagctccagctggtgcctcg 1276



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>emb|AL161540.2|ATCHRIV40 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 40
          Length = 197405

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 263    gaagctccagctggtgcctcg 283
              |||||||||||||||||||||
Sbjct: 120911 gaagctccagctggtgcctcg 120931



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>ref|XM_482463.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 831

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 53/64 (82%)
 Strand = Plus / Minus

                                                                       
Query: 309 ggtccagatgacaccttctgcgcatggtggggtggtgagggatcccacgtagcggtagta 368
           |||||||||||| || || | ||| ||||| ||||| | ||| |||| |||||| |||||
Sbjct: 678 ggtccagatgaccccctccgtgcaaggtggtgtggtaaaggagcccatgtagcgatagta 619

               
Query: 369 cacg 372
           ||||
Sbjct: 618 cacg 615



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>gb|AC169819.2| Rhesus Macaque  BAC CH250-132C22 (Children's Hospital Oakland Research
              Institute Rhesus macaque Adult Male BAC Library) complete
              sequence
          Length = 176070

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 91     atagccatgtacataaaaaa 110
              ||||||||||||||||||||
Sbjct: 122183 atagccatgtacataaaaaa 122202



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>gb|AC084218.6| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0001A07,
             complete sequence
          Length = 164898

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 79    tacaaaaatgatatagccatgtac 102
             |||||||||||||||| |||||||
Sbjct: 34827 tacaaaaatgatatagacatgtac 34804



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>gb|AC163770.3| Pan troglodytes BAC clone CH251-4E4 from chromosome unknown, complete
             sequence
          Length = 210071

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 196   tctctgctgttcacctcctg 215
             ||||||||||||||||||||
Sbjct: 32516 tctctgctgttcacctcctg 32497



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>emb|AL590995.14| Human DNA sequence from clone RP11-475B22 on chromosome 6, complete
             sequence
          Length = 113362

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 200   tgctgttcacctcctgacgc 219
             ||||||||||||||||||||
Sbjct: 53117 tgctgttcacctcctgacgc 53136



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>emb|BX537692.1|HSM805765 Homo sapiens genomic DNA; cDNA DKFZp686F06111 (from clone
            DKFZp686F06111)
          Length = 5967

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 157  caatgtctattttgctcaaaaggc 180
            ||||| ||||||||||||||||||
Sbjct: 2136 caatggctattttgctcaaaaggc 2113



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>emb|BX469896.14| Zebrafish DNA sequence from clone DKEY-52L6 in linkage group 12,
             complete sequence
          Length = 157056

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 73    actacgtacaaaaatgatat 92
             ||||||||||||||||||||
Sbjct: 92810 actacgtacaaaaatgatat 92829



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>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome
          Length = 7074893

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 371     cgctggccttgcccctggcgcccc 394
               ||||||||||| ||||||||||||
Sbjct: 5294567 cgctggccttgtccctggcgcccc 5294544



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>gb|AC160648.3| Pan troglodytes BAC clone CH251-568C23 from chromosome unknown,
             complete sequence
          Length = 205923

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 196   tctctgctgttcacctcctg 215
             ||||||||||||||||||||
Sbjct: 25818 tctctgctgttcacctcctg 25799



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>gb|AF383169.1|AF383169 Pan troglodytes leukocyte immunoglobulin-like receptor e (LIRe) mRNA,
            complete cds
          Length = 1889

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 196  tctctgctgttcacctcctg 215
            ||||||||||||||||||||
Sbjct: 1496 tctctgctgttcacctcctg 1477



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>gb|AF383161.1|AF383161 Pan troglodytes immunoglobulin-like transcript 1 (ILT1) mRNA,
            complete cds
          Length = 1665

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 196  tctctgctgttcacctcctg 215
            ||||||||||||||||||||
Sbjct: 1474 tctctgctgttcacctcctg 1455



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>ref|XM_685211.1| PREDICTED: Danio rerio similar to CG31151-PB, isoform B
           (LOC561812), mRNA
          Length = 8415

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 401 ccatcatccccatcttctcctccctatc 428
           ||||||||||| |||||||| |||||||
Sbjct: 448 ccatcatccccttcttctccaccctatc 475



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>gb|AC175823.2| Pan troglodytes BAC clone CH251-175P6 from chromosome unknown, complete
             sequence
          Length = 176244

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 196   tctctgctgttcacctcctg 215
             ||||||||||||||||||||
Sbjct: 58503 tctctgctgttcacctcctg 58484



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>gb|AC016779.5| Genomic sequence for Oryza sativa clone 10N6, complete sequence
          Length = 140234

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 79    tacaaaaatgatatagccatgtac 102
             |||||||||||||||| |||||||
Sbjct: 27576 tacaaaaatgatatagacatgtac 27599



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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 79      tacaaaaatgatatagccatgtac 102
               |||||||||||||||| |||||||
Sbjct: 2840216 tacaaaaatgatatagacatgtac 2840193



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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 332      atggtggggtggtgagggat 351
                ||||||||||||||||||||
Sbjct: 16302061 atggtggggtggtgagggat 16302080



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>gb|AC161615.4| Pan troglodytes BAC clone CH251-549K12 from chromosome 7, complete
              sequence
          Length = 193692

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 91     atagccatgtacataaaaaa 110
              ||||||||||||||||||||
Sbjct: 135725 atagccatgtacataaaaaa 135706



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>gb|AC159039.2| Pan troglodytes BAC clone CH251-65A20 from chromosome unknown,
            complete sequence
          Length = 170427

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 91   atagccatgtacataaaaaa 110
            ||||||||||||||||||||
Sbjct: 3962 atagccatgtacataaaaaa 3943



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>ref|NM_001009044.1| Pan troglodytes leukocyte immunoglobulin-like receptor, subfamily A
            (with TM domain), member 2 (LILRA2), mRNA
          Length = 1665

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 196  tctctgctgttcacctcctg 215
            ||||||||||||||||||||
Sbjct: 1474 tctctgctgttcacctcctg 1455



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>ref|NM_001009056.1| Pan troglodytes leukocyte immunoglobulin-like receptor e (LIRe), mRNA
          Length = 1889

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 196  tctctgctgttcacctcctg 215
            ||||||||||||||||||||
Sbjct: 1496 tctctgctgttcacctcctg 1477



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>gb|AC159033.2| Pan troglodytes BAC clone CH251-339G2 from chromosome unknown, complete
             sequence
          Length = 152653

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 196   tctctgctgttcacctcctg 215
             ||||||||||||||||||||
Sbjct: 97024 tctctgctgttcacctcctg 97005



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>dbj|AP006237.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OSJNBb0008D07
          Length = 156874

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 332   atggtggggtggtgagggat 351
             ||||||||||||||||||||
Sbjct: 64138 atggtggggtggtgagggat 64157



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>dbj|AP000648.5| Homo sapiens genomic DNA, chromosome 11 clone:CMB9-76D16, complete
              sequence
          Length = 149744

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 157    caatgtctattttgctcaaaaggc 180
              ||||| ||||||||||||||||||
Sbjct: 111387 caatggctattttgctcaaaaggc 111410



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>dbj|AP002364.4| Homo sapiens genomic DNA, chromosome 11 clone:RP11-121L10, complete
            sequence
          Length = 165703

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 157  caatgtctattttgctcaaaaggc 180
            ||||| ||||||||||||||||||
Sbjct: 4105 caatggctattttgctcaaaaggc 4128



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>emb|AL607066.23| Mouse DNA sequence from clone RP23-406N5 on chromosome 4, complete
             sequence
          Length = 194837

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 406   atccccatcttctcctccct 425
             ||||||||||||||||||||
Sbjct: 71340 atccccatcttctcctccct 71321



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>emb|AL132992.4|CNS01DTZ Human chromosome 14 DNA sequence BAC C-2268P10 of library CalTech-D
             from chromosome 14 of Homo sapiens (Human), complete
             sequence
          Length = 133186

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 407   tccccatcttctcctccctatcct 430
             ||||||||||||||||||| ||||
Sbjct: 13619 tccccatcttctcctccctctcct 13596



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>emb|AL118555.6|CNS01DRS Human chromosome 14 DNA sequence BAC C-2011M8 of library CalTech-D from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 122552

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 407   tccccatcttctcctccctatcct 430
             ||||||||||||||||||| ||||
Sbjct: 35109 tccccatcttctcctccctctcct 35132


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,811,034
Number of Sequences: 3902068
Number of extensions: 3811034
Number of successful extensions: 77341
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 77158
Number of HSP's gapped (non-prelim): 183
length of query: 466
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 444
effective length of database: 17,147,199,772
effective search space: 7613356698768
effective search space used: 7613356698768
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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