ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart24a10
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1OPR2_ARATH (Q8GYB8) 12-oxophytodienoate reductase 2 (EC 1.3.1.42... 161 1e-39
2OPR1_ARATH (Q8LAH7) 12-oxophytodienoate reductase 1 (EC 1.3.1.42... 160 2e-39
3OPR1_LYCES (Q9XG54) 12-oxophytodienoate reductase 1 (EC 1.3.1.42... 157 2e-38
4OPRL_LYCES (Q9FEX0) 12-oxophytodienoate reductase-like protein (... 141 1e-33
5OPR3_LYCES (Q9FEW9) 12-oxophytodienoate reductase 3 (EC 1.3.1.42... 122 4e-28
6OPRL1_ARATH (Q8GYA3) Putative 12-oxophytodienoate reductase-like... 120 2e-27
7OPR3_ARATH (Q9FUP0) 12-oxophytodienoate reductase 3 (EC 1.3.1.42... 115 7e-26
8OYEB_SCHPO (Q09671) Putative NADPH dehydrogenase C5H10.10 (EC 1.... 78 1e-14
9OYEA_SCHPO (Q09670) Putative NADPH dehydrogenase C5H10.04 (EC 1.... 72 7e-13
10OYE3_YEAST (P41816) NADPH dehydrogenase 3 (EC 1.6.99.1) (Old yel... 69 8e-12
11NEMA_ECOLI (P77258) N-ethylmaleimide reductase (EC 1.-.-.-) (N-e... 65 1e-10
12OYE1_SACPS (Q02899) NADPH dehydrogenase 1 (EC 1.6.99.1) (Old yel... 60 3e-09
13OYE2_YEAST (Q03558) NADPH dehydrogenase 2 (EC 1.6.99.1) (Old yel... 60 4e-09
14KYE1_KLULA (P40952) NADPH dehydrogenase 1 (EC 1.6.99.1) (Old yel... 55 9e-08
15EBP1_CANAL (P43084) Probable NADPH dehydrogenase (EC 1.6.99.1) (... 49 8e-06
16NADO_THEBR (P32382) NADH oxidase (EC 1.-.-.-) 33 0.35
17MRAW_CHLCV (Q823N6) S-adenosyl-methyltransferase mraW (EC 2.1.1.-) 33 0.60
18MAD1_YEAST (P40957) Spindle assembly checkpoint component MAD1 (... 32 1.3
19DCNL2_MOUSE (Q8BZJ7) DCN1-like protein 2 (Defective in cullin ne... 30 3.9
20Y435_BUCAI (P57510) Hypothetical protein BU435 30 3.9
21SYC_SYNEL (Q8DHW6) Cysteinyl-tRNA synthetase (EC 6.1.1.16) (Cyst... 30 3.9
22EF2_METTH (O27131) Elongation factor 2 (EF-2) 30 5.1
23M2GD_RAT (Q63342) Dimethylglycine dehydrogenase, mitochondrial p... 30 5.1
24Y31K_SSV1 (P20203) Hypothetical 31.5 kDa protein (ORF B-277) 30 5.1
25ISPH_CLOTE (Q895G2) 4-hydroxy-3-methylbut-2-enyl diphosphate red... 29 6.7
26DHTM_METME (P16099) Trimethylamine dehydrogenase (EC 1.5.8.2) (T... 29 8.7
27M2GD_MOUSE (Q9DBT9) Dimethylglycine dehydrogenase, mitochondrial... 29 8.7
28DCNL1_MOUSE (Q9QZ73) DCN1-like protein 1 (Defective in cullin ne... 29 8.7

>OPR2_ARATH (Q8GYB8) 12-oxophytodienoate reductase 2 (EC 1.3.1.42)|
           (12-oxophytodienoate-10,11-reductase 2) (OPDA-reductase
           2) (AtOPR2)
          Length = 374

 Score =  161 bits (407), Expect = 1e-39
 Identities = 74/116 (63%), Positives = 92/116 (79%)
 Frame = -1

Query: 517 MVQQLNKHQGFVYCHMVEPRMAIVDGRRQIPHRLLPFRKAFNGTFIAAGGYDRKEGNKVV 338
           MV+ LNK+ G +YCHM+EPRM  V       H L+P R+AF GTFI+AGG+ R++GN+ V
Sbjct: 259 MVESLNKY-GILYCHMIEPRMKTVGEIAACSHTLMPMREAFKGTFISAGGFTREDGNEAV 317

Query: 337 ADGYADLVAYGRIFLANPDLPKRFELDAPLNKYDRNTFYTQDPIIGYTDYPFLDGS 170
           A G  DLVAYGR FLANPDLPKRF+LDAPLNKY+R+TFYT DP++GYTDYP L+ +
Sbjct: 318 AKGRTDLVAYGRWFLANPDLPKRFQLDAPLNKYNRSTFYTSDPVVGYTDYPSLEST 373



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>OPR1_ARATH (Q8LAH7) 12-oxophytodienoate reductase 1 (EC 1.3.1.42)|
           (12-oxophytodienoate-10,11-reductase 1) (OPDA-reductase
           1) (AtOPR1) (FS-AT-I)
          Length = 372

 Score =  160 bits (405), Expect = 2e-39
 Identities = 72/116 (62%), Positives = 91/116 (78%)
 Frame = -1

Query: 517 MVQQLNKHQGFVYCHMVEPRMAIVDGRRQIPHRLLPFRKAFNGTFIAAGGYDRKEGNKVV 338
           M + LNK+ G +YCH++E RM  +      PH L+P RKAF GTFI+AGG+ R++GN+ V
Sbjct: 257 MAESLNKY-GILYCHVIEARMKTMGEVHACPHTLMPMRKAFKGTFISAGGFTREDGNEAV 315

Query: 337 ADGYADLVAYGRIFLANPDLPKRFELDAPLNKYDRNTFYTQDPIIGYTDYPFLDGS 170
           + G  DLVAYGR FLANPDLPKRF++DAPLNKYDR TFYT DP++GYTDYPFL+ +
Sbjct: 316 SKGRTDLVAYGRWFLANPDLPKRFQVDAPLNKYDRPTFYTSDPVVGYTDYPFLEST 371



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>OPR1_LYCES (Q9XG54) 12-oxophytodienoate reductase 1 (EC 1.3.1.42)|
           (12-oxophytodienoate-10,11-reductase 1) (OPDA-reductase
           1) (LeOPR1)
          Length = 376

 Score =  157 bits (397), Expect = 2e-38
 Identities = 71/114 (62%), Positives = 91/114 (79%)
 Frame = -1

Query: 517 MVQQLNKHQGFVYCHMVEPRMAIVDGRRQIPHRLLPFRKAFNGTFIAAGGYDRKEGNKVV 338
           MV+ LNK+    YCH+VEPRM     + +    L+P RKA+ GTFI AGGYDR++GN+ +
Sbjct: 261 MVESLNKYD-LAYCHVVEPRMKTAWEKIECTESLVPMRKAYKGTFIVAGGYDREDGNRAL 319

Query: 337 ADGYADLVAYGRIFLANPDLPKRFELDAPLNKYDRNTFYTQDPIIGYTDYPFLD 176
            +  ADLVAYGR+F++NPDLPKRFEL+APLNKY+R+TFYT DPI+GYTDYPFL+
Sbjct: 320 IEDRADLVAYGRLFISNPDLPKRFELNAPLNKYNRDTFYTSDPIVGYTDYPFLE 373



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>OPRL_LYCES (Q9FEX0) 12-oxophytodienoate reductase-like protein (EC 1.3.1.-)|
           (LeOPR2)
          Length = 355

 Score =  141 bits (355), Expect = 1e-33
 Identities = 66/114 (57%), Positives = 86/114 (75%)
 Frame = -1

Query: 517 MVQQLNKHQGFVYCHMVEPRMAIVDGRRQIPHRLLPFRKAFNGTFIAAGGYDRKEGNKVV 338
           M  +L+K  G +Y H++EPR         +   LLP RKAF GT IA+GGY + +G K +
Sbjct: 247 MANELSK-LGVLYLHVMEPR-------ETVNRSLLPIRKAFKGTLIASGGYGKSDGEKAI 298

Query: 337 ADGYADLVAYGRIFLANPDLPKRFELDAPLNKYDRNTFYTQDPIIGYTDYPFLD 176
            + YADL+++GR+FLANPDLPKRFE++APLNKY+R+TFYT DPIIGYTDYPFL+
Sbjct: 299 DENYADLISFGRMFLANPDLPKRFEVNAPLNKYNRSTFYTNDPIIGYTDYPFLE 352



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>OPR3_LYCES (Q9FEW9) 12-oxophytodienoate reductase 3 (EC 1.3.1.42)|
           (12-oxophytodienoate-10,11-reductase 3) (OPDA-reductase
           3) (LeOPR3)
          Length = 396

 Score =  122 bits (307), Expect = 4e-28
 Identities = 64/131 (48%), Positives = 86/131 (65%), Gaps = 13/131 (9%)
 Frame = -1

Query: 517 MVQQLNK---HQG--FVYCHMVEPRMAIVD-------GRRQIPHRLL-PFRKAFNGTFIA 377
           +V++LNK   H G    Y H+ +PR            G  +   RL+   R A+ GTFI 
Sbjct: 259 VVERLNKIQLHSGSKLAYLHVTQPRYVAYGQTEAGRLGSEEEEARLMRTLRNAYQGTFIC 318

Query: 376 AGGYDRKEGNKVVADGYADLVAYGRIFLANPDLPKRFELDAPLNKYDRNTFYTQDPIIGY 197
           +GGY R+ G + VA G ADLV+YGR+F++NPDL  R +L+APLNKY+R TFYTQDP++GY
Sbjct: 319 SGGYTRELGIEAVAQGDADLVSYGRLFISNPDLVMRIKLNAPLNKYNRKTFYTQDPVVGY 378

Query: 196 TDYPFLDGSNA 164
           TDYPFL G+ +
Sbjct: 379 TDYPFLQGNGS 389



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>OPRL1_ARATH (Q8GYA3) Putative 12-oxophytodienoate reductase-like protein 1 (EC|
           1.3.1.-)
          Length = 324

 Score =  120 bits (301), Expect = 2e-27
 Identities = 58/92 (63%), Positives = 69/92 (75%)
 Frame = -1

Query: 517 MVQQLNKHQGFVYCHMVEPRMAIVDGRRQIPHRLLPFRKAFNGTFIAAGGYDRKEGNKVV 338
           M + LN+ +  +YCHM+EPRM  V    +    L P R AFNGTFI AGGY R++GNK V
Sbjct: 234 MAKSLNRFE-ILYCHMIEPRMKTVSEIFECRESLTPMRNAFNGTFIVAGGYTREDGNKAV 292

Query: 337 ADGYADLVAYGRIFLANPDLPKRFELDAPLNK 242
           A+G  DLVAYGR+FLANPDLPKRFEL+APLNK
Sbjct: 293 AEGRTDLVAYGRLFLANPDLPKRFELNAPLNK 324



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>OPR3_ARATH (Q9FUP0) 12-oxophytodienoate reductase 3 (EC 1.3.1.42)|
           (12-oxophytodienoate-10,11-reductase 3) (OPDA-reductase
           3) (Delayed dehiscence 1) (AtOPR3)
          Length = 391

 Score =  115 bits (288), Expect = 7e-26
 Identities = 59/126 (46%), Positives = 82/126 (65%), Gaps = 13/126 (10%)
 Frame = -1

Query: 517 MVQQLNKHQG-----FVYCHMVEPRMAIV-------DGRRQIPHRLLP-FRKAFNGTFIA 377
           +V  LNK QG       Y H+ +PR            G  +   +L+   R A+NGTF++
Sbjct: 260 VVGMLNKLQGVNGSKLAYLHVTQPRYHAYGQTESGRQGSDEEEAKLMKSLRMAYNGTFMS 319

Query: 376 AGGYDRKEGNKVVADGYADLVAYGRIFLANPDLPKRFELDAPLNKYDRNTFYTQDPIIGY 197
           +GG++++ G + V  G ADLV+YGR+F+ANPDL  RF++D  LNKY+R TFYTQDP++GY
Sbjct: 320 SGGFNKELGMQAVQQGDADLVSYGRLFIANPDLVSRFKIDGELNKYNRKTFYTQDPVVGY 379

Query: 196 TDYPFL 179
           TDYPFL
Sbjct: 380 TDYPFL 385



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>OYEB_SCHPO (Q09671) Putative NADPH dehydrogenase C5H10.10 (EC 1.6.99.1) (Old|
           yellow enzyme homolog)
          Length = 392

 Score = 78.2 bits (191), Expect = 1e-14
 Identities = 45/102 (44%), Positives = 60/102 (58%), Gaps = 2/102 (1%)
 Frame = -1

Query: 481 YCHMVEPRMAIVDGRRQIPHR--LLPFRKAFNGTFIAAGGYDRKEGNKVVADGYADLVAY 308
           Y H +EPR    +G   I      L ++  +   FI AGG+DR    ++ A+    LVA+
Sbjct: 282 YLHAIEPRQ-YWNGHVHITQEKNTLIYKNLWGDPFITAGGHDRDSAIQM-AEQENTLVAF 339

Query: 307 GRIFLANPDLPKRFELDAPLNKYDRNTFYTQDPIIGYTDYPF 182
           GR FL+NPDLP R + + PLNK+DR TFYT+    GY DYPF
Sbjct: 340 GRYFLSNPDLPFRLKYNLPLNKWDRATFYTKMSPKGYIDYPF 381



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>OYEA_SCHPO (Q09670) Putative NADPH dehydrogenase C5H10.04 (EC 1.6.99.1) (Old|
           yellow enzyme homolog)
          Length = 382

 Score = 72.4 bits (176), Expect = 7e-13
 Identities = 43/101 (42%), Positives = 57/101 (56%), Gaps = 1/101 (0%)
 Frame = -1

Query: 481 YCHMVEPRMAIVDGRRQIPHRLLPF-RKAFNGTFIAAGGYDRKEGNKVVADGYADLVAYG 305
           Y H +EPR      +     +   F +K + G FI AGGYD +   +  A+    LVA+G
Sbjct: 275 YIHAIEPRKYWSGHKLVSSEQNTSFLQKYWKGPFITAGGYDPETAVQA-ANERGVLVAFG 333

Query: 304 RIFLANPDLPKRFELDAPLNKYDRNTFYTQDPIIGYTDYPF 182
           R F+ANPDL  R +   PLNK+DR++FY      GYTDYPF
Sbjct: 334 RNFIANPDLVFRIKHHIPLNKWDRSSFYLPKTEKGYTDYPF 374



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>OYE3_YEAST (P41816) NADPH dehydrogenase 3 (EC 1.6.99.1) (Old yellow enzyme 3)|
          Length = 399

 Score = 68.9 bits (167), Expect = 8e-12
 Identities = 44/106 (41%), Positives = 59/106 (55%), Gaps = 7/106 (6%)
 Frame = -1

Query: 481 YCHMVEPRM---AIVDGRRQIPHRLLPFRKA-FNGTFIAAGGYDRKEGNKVVADGYAD-- 320
           + H+VEPR+   ++V+G  +       F  + + G  I AG Y      +VV +   D  
Sbjct: 284 FVHLVEPRVTDPSLVEGEGEYSEGTNDFAYSIWKGPIIRAGNYALHP--EVVREQVKDPR 341

Query: 319 -LVAYGRIFLANPDLPKRFELDAPLNKYDRNTFYTQDPIIGYTDYP 185
            L+ YGR F++NPDL  R E   PLNKYDR+TFYT     GYTDYP
Sbjct: 342 TLIGYGRFFISNPDLVYRLEEGLPLNKYDRSTFYTMS-AEGYTDYP 386



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>NEMA_ECOLI (P77258) N-ethylmaleimide reductase (EC 1.-.-.-) (N-ethylmaleimide|
           reducing enzyme)
          Length = 365

 Score = 65.1 bits (157), Expect = 1e-10
 Identities = 42/113 (37%), Positives = 56/113 (49%)
 Frame = -1

Query: 517 MVQQLNKHQGFVYCHMVEPRMAIVDGRRQIPHRLLPFRKAFNGTFIAAGGYDRKEGNKVV 338
           +++QL K +G  Y HM EP  A   G           R  F+G  I AG Y  ++   ++
Sbjct: 257 LIEQLGK-RGIAYLHMSEPDWA--GGEPYTDAFREKVRARFHGPIIGAGAYTVEKAETLI 313

Query: 337 ADGYADLVAYGRIFLANPDLPKRFELDAPLNKYDRNTFYTQDPIIGYTDYPFL 179
             G  D VA+GR ++ANPDL  R +  A LN     +FY      GYTDYP L
Sbjct: 314 GKGLIDAVAFGRDWIANPDLVARLQRKAELNPQRAESFY-GGGAEGYTDYPTL 365



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>OYE1_SACPS (Q02899) NADPH dehydrogenase 1 (EC 1.6.99.1) (Old yellow enzyme 1)|
          Length = 399

 Score = 60.5 bits (145), Expect = 3e-09
 Identities = 41/106 (38%), Positives = 55/106 (51%), Gaps = 7/106 (6%)
 Frame = -1

Query: 481 YCHMVEPRMA---IVDGRRQIPHRLLPF-RKAFNGTFIAAGGYDRKEGNKVVADGYAD-- 320
           + H+VEPR+    + +G  +       F    + G  I AG +      +VV +   D  
Sbjct: 284 FVHLVEPRVTNPFLTEGEGEYEGGSNDFVYSIWKGPVIRAGNFALHP--EVVREEVKDKR 341

Query: 319 -LVAYGRIFLANPDLPKRFELDAPLNKYDRNTFYTQDPIIGYTDYP 185
            L+ YGR F++NPDL  R E   PLNKYDR+TFY Q    GY DYP
Sbjct: 342 TLIGYGRFFISNPDLVDRLEKGLPLNKYDRDTFY-QMSAHGYIDYP 386



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>OYE2_YEAST (Q03558) NADPH dehydrogenase 2 (EC 1.6.99.1) (Old yellow enzyme 2)|
          Length = 399

 Score = 60.1 bits (144), Expect = 4e-09
 Identities = 40/106 (37%), Positives = 55/106 (51%), Gaps = 7/106 (6%)
 Frame = -1

Query: 481 YCHMVEPRMA---IVDGRRQIPHRLLPFRKA-FNGTFIAAGGYDRKEGNKVVADGYAD-- 320
           + H+VEPR+    + +G  +       F  + + G  I AG +      +VV +   D  
Sbjct: 284 FVHLVEPRVTNPFLTEGEGEYNGGSNKFAYSIWKGPIIRAGNFALHP--EVVREEVKDPR 341

Query: 319 -LVAYGRIFLANPDLPKRFELDAPLNKYDRNTFYTQDPIIGYTDYP 185
            L+ YGR F++NPDL  R E   PLNKYDR+TFY      GY DYP
Sbjct: 342 TLIGYGRFFISNPDLVDRLEKGLPLNKYDRDTFYKMS-AEGYIDYP 386



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>KYE1_KLULA (P40952) NADPH dehydrogenase 1 (EC 1.6.99.1) (Old yellow enzyme 1)|
          Length = 398

 Score = 55.5 bits (132), Expect = 9e-08
 Identities = 41/118 (34%), Positives = 52/118 (44%), Gaps = 19/118 (16%)
 Frame = -1

Query: 481 YCHMVEPRMAIVDGRRQIPHRLLPFRKAFNGTFIAAGG-----YDRKEGNKVVADGYA-- 323
           Y  +VEPR+              PF+  F G +   GG     Y   +GN +    YA  
Sbjct: 284 YVDLVEPRVTS------------PFQPEFEGWY--KGGTNEFVYSVWKGNVLRVGNYALD 329

Query: 322 ------------DLVAYGRIFLANPDLPKRFELDAPLNKYDRNTFYTQDPIIGYTDYP 185
                        L+ YGR F+ANPDL +R E   PLN+YDR +FY      GY DYP
Sbjct: 330 PDAAITDSKNPNTLIGYGRAFIANPDLVERLEKGLPLNQYDRPSFYKMS-AEGYIDYP 386



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>EBP1_CANAL (P43084) Probable NADPH dehydrogenase (EC 1.6.99.1)|
           (Estrogen-binding protein) (EBP)
          Length = 406

 Score = 48.9 bits (115), Expect = 8e-06
 Identities = 36/104 (34%), Positives = 52/104 (50%), Gaps = 7/104 (6%)
 Frame = -1

Query: 511 QQLNKHQGFVYCHMVEPRMA-IVD-GRRQIPHRLLPFR-KAFNGTFIAAGGY--DRKEGN 347
           Q+ +  Q   Y  +VEPR+  I D   +    R   F  K + G FI AG Y  D  E  
Sbjct: 280 QRADNGQQLAYISLVEPRVTGIYDVSLKDQQGRSNEFAYKIWKGNFIRAGNYTYDAPEFK 339

Query: 346 KVVADGYAD--LVAYGRIFLANPDLPKRFELDAPLNKYDRNTFY 221
            ++ D   D  ++ + R F +NPDL ++ +L  PLN Y+R  FY
Sbjct: 340 TLINDLKNDRSIIGFSRFFTSNPDLVEKLKLGKPLNYYNREEFY 383



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>NADO_THEBR (P32382) NADH oxidase (EC 1.-.-.-)|
          Length = 651

 Score = 33.5 bits (75), Expect = 0.35
 Identities = 18/47 (38%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
 Frame = -1

Query: 406 RKAFNGTFIAAGGYDRKE-GNKVVADGYADLVAYGRIFLANPDLPKR 269
           +K  N   I  G     E   K++A+G AD VA GR  +A+P+ PK+
Sbjct: 286 KKVVNIPVITVGVIREPEFAEKIIAEGRADFVAVGRGLIADPEWPKK 332



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>MRAW_CHLCV (Q823N6) S-adenosyl-methyltransferase mraW (EC 2.1.1.-)|
          Length = 297

 Score = 32.7 bits (73), Expect = 0.60
 Identities = 19/71 (26%), Positives = 31/71 (43%), Gaps = 4/71 (5%)
 Frame = +2

Query: 284 WISKKDPSVSNKISIAVGHHFVAFLSIIPS----SGNERAVECFPEGQEPVGYLSAAIHN 451
           W S ++P     +++  G H  AFLS  PS     G++R        +E +      +H 
Sbjct: 18  WFSDRNPRSFCDVTVGAGGHAEAFLSTYPSIISYDGSDRDATALSLARERLEKFGDRVHL 77

Query: 452 GHSGFYHVAID 484
            H+ F  +A D
Sbjct: 78  HHASFEDLAQD 88



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>MAD1_YEAST (P40957) Spindle assembly checkpoint component MAD1 (Mitotic arrest|
           deficient protein 1)
          Length = 749

 Score = 31.6 bits (70), Expect = 1.3
 Identities = 14/43 (32%), Positives = 27/43 (62%)
 Frame = +2

Query: 167 VRAIKERIVCVANDRILCVEGVAVVLVQRSVELKSLRQIWISK 295
           ++++KER     ND+  C+E +   L  + +E+++LRQ + SK
Sbjct: 124 LKSLKERSANSMNDKDKCIEELRTTLQNKDLEMETLRQQYDSK 166



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>DCNL2_MOUSE (Q8BZJ7) DCN1-like protein 2 (Defective in cullin neddylation|
           protein 2-like protein 2) (DCUN1 domain-containing
           protein 2)
          Length = 258

 Score = 30.0 bits (66), Expect = 3.9
 Identities = 17/44 (38%), Positives = 24/44 (54%)
 Frame = +2

Query: 245 VQRSVELKSLRQIWISKKDPSVSNKISIAVGHHFVAFLSIIPSS 376
           ++ SV+ K L Q++   KDP   NKI I     F   LS+ P+S
Sbjct: 56  MKSSVDQKKLEQLYSRYKDPQDENKIGIDGIQQFCDDLSLDPAS 99



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>Y435_BUCAI (P57510) Hypothetical protein BU435|
          Length = 319

 Score = 30.0 bits (66), Expect = 3.9
 Identities = 13/37 (35%), Positives = 23/37 (62%)
 Frame = +3

Query: 36  YISKLFVEMIHYTCPCIYIPEKKLLQLYKPSKSLTIV 146
           ++S LFV++ + +CP I+   K +L   KPS+   +V
Sbjct: 128 FLSSLFVKIPNQSCPVIHEDNKTILWYEKPSERFLLV 164



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>SYC_SYNEL (Q8DHW6) Cysteinyl-tRNA synthetase (EC 6.1.1.16) (Cysteine--tRNA|
           ligase) (CysRS)
          Length = 486

 Score = 30.0 bits (66), Expect = 3.9
 Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
 Frame = +2

Query: 209 RILCVEGVAVVLVQRSVEL--KSLRQIWISKKDPSVSNKISIAVGHHFVAFLSIIPSSGN 382
           R L   G  V  VQ   ++  K LR+ + + +  +  +   IA  H  +A L+I+P+S  
Sbjct: 53  RYLTFLGYTVHYVQNFTDIDDKILRRAYENGETMATVSDRYIAAYHQDMAALNILPASAY 112

Query: 383 ERAVECFPE 409
            RA E  PE
Sbjct: 113 PRATEVIPE 121



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>EF2_METTH (O27131) Elongation factor 2 (EF-2)|
          Length = 730

 Score = 29.6 bits (65), Expect = 5.1
 Identities = 31/126 (24%), Positives = 52/126 (41%), Gaps = 27/126 (21%)
 Frame = +2

Query: 173 AIKERIVCVANDRILCVEGVAVV---LVQRSVELKSLRQI--------WISKKDPSVSNK 319
           A+    +C    +I   EG+  +   +V  +VE K+ + +         + K+DP+V  +
Sbjct: 366 AVAGETICDTGRKIKAFEGLEHISEPVVTVAVEAKNTKDLPKLIEVLRQVGKEDPTVRVE 425

Query: 320 ISIAVGHHFVA-----FLSIIPSSGNERAVECFPEGQEPV-----------GYLSAAIHN 451
           I+   G H ++      L II    NE+ VE   E  EP+           G +     N
Sbjct: 426 INEETGEHLISGMGELHLEIIAYRINEKGVEI--ETSEPIVVYRETVAGTAGPVEGKSPN 483

Query: 452 GHSGFY 469
            H+ FY
Sbjct: 484 KHNRFY 489



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>M2GD_RAT (Q63342) Dimethylglycine dehydrogenase, mitochondrial precursor (EC|
           1.5.99.2) (ME2GLYDH)
          Length = 857

 Score = 29.6 bits (65), Expect = 5.1
 Identities = 20/54 (37%), Positives = 24/54 (44%), Gaps = 8/54 (14%)
 Frame = +2

Query: 356 LSIIPSSGNERAVECF--------PEGQEPVGYLSAAIHNGHSGFYHVAIDKSL 493
           L  I + G +R + C         PEG E V Y    I N  SG Y  +I KSL
Sbjct: 753 LKQIKAKGLKRRLVCLTLATDDVDPEGNESVWYKGKVIGNTTSGSYSYSIQKSL 806



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>Y31K_SSV1 (P20203) Hypothetical 31.5 kDa protein (ORF B-277)|
          Length = 277

 Score = 29.6 bits (65), Expect = 5.1
 Identities = 13/60 (21%), Positives = 32/60 (53%), Gaps = 10/60 (16%)
 Frame = +2

Query: 224 EGVAVVLVQRS----------VELKSLRQIWISKKDPSVSNKISIAVGHHFVAFLSIIPS 373
           +G++++ ++R+          +E+K LR+ W+   +P +  ++    G  FVA   ++P+
Sbjct: 108 DGLSILFLRRAKLIENQGYLMLEVKKLRKAWVLTAEPILLERLKFPFGKKFVAVHFVLPN 167



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>ISPH_CLOTE (Q895G2) 4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC|
           1.17.1.2)
          Length = 635

 Score = 29.3 bits (64), Expect = 6.7
 Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 3/50 (6%)
 Frame = +3

Query: 21  GITWEYISKLF---VEMIHYTCPCIYIPEKKLLQLYKPSKSLTIVEQMNY 161
           G+T E I KL    + +I  TCP +   +KK  + YK   S+ IV   N+
Sbjct: 78  GVTLETIQKLKEKKLNIIDATCPYVSNIQKKAQKYYKEGYSILIVGDKNH 127



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>DHTM_METME (P16099) Trimethylamine dehydrogenase (EC 1.5.8.2) (TMADh)|
          Length = 729

 Score = 28.9 bits (63), Expect = 8.7
 Identities = 14/41 (34%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
 Frame = -1

Query: 382 IAAGGY-DRKEGNKVVADGYADLVAYGRIFLANPDLPKRFE 263
           +  G Y D ++  ++V  GYAD++   R  +A+P LP++ E
Sbjct: 295 LGVGRYTDPEKMIEIVTKGYADIIGCARPSIADPFLPQKVE 335



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>M2GD_MOUSE (Q9DBT9) Dimethylglycine dehydrogenase, mitochondrial precursor (EC|
           1.5.99.2) (ME2GLYDH)
          Length = 869

 Score = 28.9 bits (63), Expect = 8.7
 Identities = 18/54 (33%), Positives = 24/54 (44%), Gaps = 8/54 (14%)
 Frame = +2

Query: 356 LSIIPSSGNERAVECF--------PEGQEPVGYLSAAIHNGHSGFYHVAIDKSL 493
           L  I + G +R + C         PEG E + Y    + N  SG Y  +I KSL
Sbjct: 753 LKQIKTEGLKRRLVCLTVATDDVDPEGNESIWYKGKVVGNTTSGSYSYSIQKSL 806



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>DCNL1_MOUSE (Q9QZ73) DCN1-like protein 1 (Defective in cullin neddylation|
           protein 1-like protein 1) (DCUN1 domain-containing
           protein 1) (Testis-specific protein 3)
          Length = 259

 Score = 28.9 bits (63), Expect = 8.7
 Identities = 16/44 (36%), Positives = 24/44 (54%)
 Frame = +2

Query: 245 VQRSVELKSLRQIWISKKDPSVSNKISIAVGHHFVAFLSIIPSS 376
           V+ S++ K L Q++   KDP   NKI I     F   L++ P+S
Sbjct: 56  VKGSLDRKKLEQLYTRYKDPQDENKIGIDGIQQFCDDLALDPAS 99


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 80,593,294
Number of Sequences: 219361
Number of extensions: 1741869
Number of successful extensions: 4772
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 4645
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4769
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3869946934
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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