Clone Name | rbart24a06 |
---|---|
Clone Library Name | barley_pub |
>gb|AY854249.1| Human T-lymphotropic virus 1 LTR, partial sequence; and gag protein gene, partial cds Length = 879 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 384 gaggccgccatccacgccggttgagtcgcgttctgc 419
>gb|AY563954.1| Human T-lymphotropic virus 1 strain BRRP438, complete genome Length = 8883 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 8554 gaggccgccatccacgccggttgagtcgcgttctgc 8589 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 275 gaggccgccatccacgccggttgagtcgcgttctgc 310
>gb|AY563953.1| Human T-lymphotropic virus 1, complete genome Length = 8383 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 379 gaggccgccatccacgccggttgagtcgcgttctgc 414
>gb|AY786219.1| Human T-lymphotropic virus 1 isolate ID3053 LTR, partial sequence Length = 506 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 270 gaggccgccatccacgccggttgagtcgcgttctgc 305
>gb|AY786218.1| Human T-lymphotropic virus 1 isolate ID3050 LTR, partial sequence Length = 507 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 271 gaggccgccatccacgccggttgagtcgcgttctgc 306
>gb|AY786217.1| Human T-lymphotropic virus 1 isolate ID3048 LTR, partial sequence Length = 507 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 271 gaggccgccatccacgccggttgagtcgcgttctgc 306
>gb|AY786216.1| Human T-lymphotropic virus 1 isolate ID3046 LTR, partial sequence Length = 507 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 271 gaggccgccatccacgccggttgagtcgcgttctgc 306
>gb|AY786215.1| Human T-lymphotropic virus 1 isolate CRM41 LTR, partial sequence Length = 507 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 271 gaggccgccatccacgccggttgagtcgcgttctgc 306
>gb|AY786214.1| Human T-lymphotropic virus 1 isolate CHI444 LTR, partial sequence Length = 508 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 271 gaggccgccatccacgccggttgagtcgcgttctgc 306
>gb|AY786213.1| Human T-lymphotropic virus 1 isolate CHI431 LTR, partial sequence Length = 508 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 272 gaggccgccatccacgccggttgagtcgcgttctgc 307
>gb|AY786211.1| Human T-lymphotropic virus 1 isolate CHI408 LTR, partial sequence Length = 507 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 271 gaggccgccatccacgccggttgagtcgcgttctgc 306
>gb|AY786210.1| Human T-lymphotropic virus 1 isolate CHI399 LTR, partial sequence Length = 507 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 271 gaggccgccatccacgccggttgagtcgcgttctgc 306
>gb|AY786209.1| Human T-lymphotropic virus 1 isolate CHI384 LTR, partial sequence Length = 507 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 271 gaggccgccatccacgccggttgagtcgcgttctgc 306
>gb|AY786208.1| Human T-lymphotropic virus 1 isolate BOL010 LTR, partial sequence Length = 507 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 271 gaggccgccatccacgccggttgagtcgcgttctgc 306
>gb|AY786207.1| Human T-lymphotropic virus 1 isolate BOL011 LTR, partial sequence Length = 507 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 271 gaggccgccatccacgccggttgagtcgcgttctgc 306
>gb|AY786206.1| Human T-lymphotropic virus 1 isolate ARG009 LTR, partial sequence Length = 508 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 272 gaggccgccatccacgccggttgagtcgcgttctgc 307
>gb|AY660719.1| Mammalian expression vector pBGSA, partial sequence Length = 1412 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 418 gaggccgccatccacgccggttgagtcgcgttctgc 453
>gb|AY611015.1| Human T-lymphotropic virus 1 isolate PE5ra 3' long terminal repeat, partial sequence Length = 484 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 289 gaggccgccatccacgccggttgagtcgcgttctgc 324
>gb|AY611014.1| Human T-lymphotropic virus 1 isolate PE3pe 3' long terminal repeat, partial sequence Length = 484 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 289 gaggccgccatccacgccggttgagtcgcgttctgc 324
>gb|AY611012.1| Human T-lymphotropic virus 1 isolate PE1ga 3' long terminal repeat, partial sequence Length = 484 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 289 gaggccgccatccacgccggttgagtcgcgttctgc 324
>gb|AY611011.1| Human T-lymphotropic virus 1 isolate CH1va 3' long terminal repeat, partial sequence Length = 484 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 290 gaggccgccatccacgccggttgagtcgcgttctgc 325
>gb|AY611010.1| Human T-lymphotropic virus 1 isolate PE4cu 3' long terminal repeat, partial sequence Length = 485 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 290 gaggccgccatccacgccggttgagtcgcgttctgc 325
>gb|AY611009.1| Human T-lymphotropic virus 1 isolate HT1IC1ta 3' long terminal repeat, partial sequence Length = 485 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 290 gaggccgccatccacgccggttgagtcgcgttctgc 325
>gb|AY342304.1| Human T-lymphotropic virus 1 isolate PH907 3' LTR, partial sequence Length = 758 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 393 gaggccgccatccacgccggttgagtcgcgttctgc 428
>gb|AY342303.1| Human T-lymphotropic virus 1 isolate PH906 3' LTR, partial sequence Length = 758 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 393 gaggccgccatccacgccggttgagtcgcgttctgc 428
>gb|AY342302.1| Human T-lymphotropic virus 1 isolate 2B-Abdou 3' LTR, partial sequence Length = 758 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 393 gaggccgccatccacgccggttgagtcgcgttctgc 428
>gb|AY342301.1| Human T-lymphotropic virus 1 isolate 5B-Marietou 3' LTR, partial sequence Length = 758 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 393 gaggccgccatccacgccggttgagtcgcgttctgc 428
>gb|AY342300.1| Human T-lymphotropic virus 1 isolate 6A-issa 3' LTR, partial sequence Length = 758 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 393 gaggccgccatccacgccggttgagtcgcgttctgc 428
>gb|AY613998.1| Cloning vector pSRalphahygroY, complete sequence Length = 6588 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 6345 gaggccgccatccacgccggttgagtcgcgttctgc 6380
>gb|AY613997.1| Cloning vector pSRalphaneoR, complete sequence Length = 6423 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 6180 gaggccgccatccacgccggttgagtcgcgttctgc 6215
>gb|AY613996.1| Cloning vector pSRalphapuroG, complete sequence Length = 5936 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 5693 gaggccgccatccacgccggttgagtcgcgttctgc 5728
>gb|AY613995.1| Cloning vector pSRalphablastC, complete sequence Length = 5800 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 5557 gaggccgccatccacgccggttgagtcgcgttctgc 5592
>gb|AY613994.1| Cloning vector pSRalphapuro, complete sequence Length = 4040 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 3797 gaggccgccatccacgccggttgagtcgcgttctgc 3832
>gb|AY613993.1| Cloning vector pSRalphablast, complete sequence Length = 3875 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 3632 gaggccgccatccacgccggttgagtcgcgttctgc 3667
>gb|AY613992.1| Cloning vector pSRalphaneo, complete sequence Length = 4542 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 4299 gaggccgccatccacgccggttgagtcgcgttctgc 4334
>gb|AY613991.1| Cloning vector pSRalphahygro, complete sequence Length = 4663 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 4420 gaggccgccatccacgccggttgagtcgcgttctgc 4455
>gb|DQ235699.1| Human T-lymphotropic virus 1 isolate BD89517 LTR, complete sequence; and tax protein gene, partial cds Length = 758 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 393 gaggccgccatccacgccggttgagtcgcgttctgc 428
>gb|DQ235698.1| Human T-lymphotropic virus 1 isolate BD89112 LTR, complete sequence; and tax protein gene, partial cds Length = 758 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 393 gaggccgccatccacgccggttgagtcgcgttctgc 428
>gb|AY496636.1| Simian T-lymphotropic virus 1 isolate 00CM-MT265 LTR, partial sequence Length = 650 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 382 gaggccgccatccacgccggttgagtcgcgttctgc 417
>gb|AY496635.1| Simian T-lymphotropic virus 1 isolate 02CM-3157 LTR, partial sequence Length = 648 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 381 gaggccgccatccacgccggttgagtcgcgttctgc 416
>gb|AY496634.1| Simian T-lymphotropic virus 1 isolate 01CM-2474 LTR, partial sequence Length = 649 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 382 gaggccgccatccacgccggttgagtcgcgttctgc 417
>gb|AY496633.1| Simian T-lymphotropic virus 1 isolate 01CM-1272 LTR, partial sequence Length = 648 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 381 gaggccgccatccacgccggttgagtcgcgttctgc 416
>gb|AY496632.1| Simian T-lymphotropic virus 1 isolate 01CM-1141 LTR, partial sequence Length = 648 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 381 gaggccgccatccacgccggttgagtcgcgttctgc 416
>gb|AY496631.1| Simian T-lymphotropic virus 1 isolate 01CM-1183 LTR, partial sequence Length = 648 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 381 gaggccgccatccacgccggttgagtcgcgttctgc 416
>gb|AY496630.1| Simian T-lymphotropic virus 1 isolate 01CM-1122 LTR, partial sequence Length = 648 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 381 gaggccgccatccacgccggttgagtcgcgttctgc 416
>gb|AY496629.1| Simian T-lymphotropic virus 1 isolate 01CM-1106 LTR, partial sequence Length = 648 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 381 gaggccgccatccacgccggttgagtcgcgttctgc 416
>gb|AY496627.1| Simian T-lymphotropic virus 1 isolate 01CM-1312 LTR, partial sequence Length = 648 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 381 gaggccgccatccacgccggttgagtcgcgttctgc 416
>gb|AY496626.1| Simian T-lymphotropic virus 1 isolate 01CM-1038 LTR, partial sequence Length = 648 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 381 gaggccgccatccacgccggttgagtcgcgttctgc 416
>gb|AF228988.1| Human T-cell lymphotropic virus type 1 isolate ATLL long terminal repeat, partial sequence Length = 555 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 36 gaggccgccatccacgccggttgagtcgcgttctgc 71
>gb|AF228987.1| Human T-cell lymphotropic virus type 1 isolate ATLL long terminal repeat, partial sequence Length = 555 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 35 gaggccgccatccacgccggttgagtcgcgttctgc 70
>gb|AF228986.1| Human T-cell lymphotropic virus type 1 isolate ATLL long terminal repeat, partial sequence Length = 556 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 36 gaggccgccatccacgccggttgagtcgcgttctgc 71
>gb|AF228985.1| Human T-cell lymphotropic virus type 1 isolate ATLL long terminal repeat, partial sequence Length = 655 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 36 gaggccgccatccacgccggttgagtcgcgttctgc 71
>gb|AF228984.1| Human T-cell lymphotropic virus type 1 isolate ATLL long terminal repeat, partial sequence Length = 656 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 36 gaggccgccatccacgccggttgagtcgcgttctgc 71
>gb|AF228983.1| Human T-cell lymphotropic virus type 1 isolate ATLL long terminal repeat, partial sequence Length = 414 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 36 gaggccgccatccacgccggttgagtcgcgttctgc 71
>gb|AF228982.1| Human T-cell lymphotropic virus type 1 isolate ATLL long terminal repeat, partial sequence Length = 413 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 36 gaggccgccatccacgccggttgagtcgcgttctgc 71
>gb|AF228981.1| Human T-cell lymphotropic virus type 1 isolate ATLL long terminal repeat, partial sequence Length = 415 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 36 gaggccgccatccacgccggttgagtcgcgttctgc 71
>gb|AF228980.1| Human T-cell lymphotropic virus type 1 isolate ATLL long terminal repeat, partial sequence Length = 415 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 36 gaggccgccatccacgccggttgagtcgcgttctgc 71
>gb|AF228979.1| Human T-cell lymphotropic virus type 1 isolate ATLL long terminal repeat, partial sequence Length = 563 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 36 gaggccgccatccacgccggttgagtcgcgttctgc 71
>gb|AF228966.1| Human T-cell lymphotropic virus type 1 isolate Asymptomatic carrier long terminal repeat, partial sequence Length = 640 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 36 gaggccgccatccacgccggttgagtcgcgttctgc 71
>gb|AF228965.1| Human T-cell lymphotropic virus type 1 isolate Asymptomatic carrier long terminal repeat, partial sequence Length = 527 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 36 gaggccgccatccacgccggttgagtcgcgttctgc 71
>gb|AF228964.1| Human T-cell lymphotropic virus type 1 isolate Asymptomatic carrier long terminal repeat, partial sequence Length = 454 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 36 gaggccgccatccacgccggttgagtcgcgttctgc 71
>gb|AF228963.1| Human T-cell lymphotropic virus type 1 isolate Asymptomatic carrier long terminal repeat, partial sequence Length = 454 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 36 gaggccgccatccacgccggttgagtcgcgttctgc 71
>gb|AF228962.1| Human T-cell lymphotropic virus type 1 isolate Asymptomatic carrier long terminal repeat, partial sequence Length = 441 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 36 gaggccgccatccacgccggttgagtcgcgttctgc 71
>gb|AF228961.1| Human T-cell lymphotropic virus type 1 isolate Asymptomatic carrier long terminal repeat, partial sequence Length = 441 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 36 gaggccgccatccacgccggttgagtcgcgttctgc 71
>gb|AF228960.1| Human T-cell lymphotropic virus type 1 isolate Asymptomatic carrier long terminal repeat, partial sequence Length = 441 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 36 gaggccgccatccacgccggttgagtcgcgttctgc 71
>gb|AF228959.1| Human T-cell lymphotropic virus type 1 isolate Asymptomatic carrier long terminal repeat, partial sequence Length = 421 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 36 gaggccgccatccacgccggttgagtcgcgttctgc 71
>gb|AF228958.1| Human T-cell lymphotropic virus type 1 isolate Asymptomatic carrier long terminal repeat, partial sequence Length = 675 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 36 gaggccgccatccacgccggttgagtcgcgttctgc 71
>gb|AF228957.1| Human T-cell lymphotropic virus type 1 isolate Asymptomatic carrier long terminal repeat, partial sequence Length = 469 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 36 gaggccgccatccacgccggttgagtcgcgttctgc 71
>gb|AF228956.1| Human T-cell lymphotropic virus type 1 isolate Asymptomatic carrier long terminal repeat, partial sequence Length = 469 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 36 gaggccgccatccacgccggttgagtcgcgttctgc 71
>gb|AF228955.1| Human T-cell lymphotropic virus type 1 isolate Asymptomatic carrier long terminal repeat, partial sequence Length = 469 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 36 gaggccgccatccacgccggttgagtcgcgttctgc 71
>gb|AF228954.1| Human T-cell lymphotropic virus type 1 isolate Asymptomatic carrier long terminal repeat, partial sequence Length = 413 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 36 gaggccgccatccacgccggttgagtcgcgttctgc 71
>gb|AF228953.1| Human T-cell lymphotropic virus type 1 isolate TSP/HAM long terminal repeat, partial sequence Length = 542 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 36 gaggccgccatccacgccggttgagtcgcgttctgc 71
>gb|AF228952.1| Human T-cell lymphotropic virus type 1 isolate TSP/HAM long terminal repeat, partial sequence Length = 542 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 36 gaggccgccatccacgccggttgagtcgcgttctgc 71
>gb|AF228951.1| Human T-cell lymphotropic virus type 1 isolate TSP/HAM long terminal repeat, partial sequence Length = 507 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 36 gaggccgccatccacgccggttgagtcgcgttctgc 71
>gb|AF228949.1| Human T-cell lymphotropic virus type 1 isolate TSP/HAM long terminal repeat, partial sequence Length = 507 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 36 gaggccgccatccacgccggttgagtcgcgttctgc 71
>gb|AF228948.1| Human T-cell lymphotropic virus type 1 isolate TSP/HAM long terminal repeat, partial sequence Length = 659 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 36 gaggccgccatccacgccggttgagtcgcgttctgc 71
>gb|AF228947.1| Human T-cell lymphotropic virus type 1 isolate TSP/HAM long terminal repeat, partial sequence Length = 659 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 36 gaggccgccatccacgccggttgagtcgcgttctgc 71
>gb|AF228946.1| Human T-cell lymphotropic virus type 1 isolate TSP/HAM long terminal repeat, partial sequence Length = 659 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 36 gaggccgccatccacgccggttgagtcgcgttctgc 71
>gb|AF228945.1| Human T-cell lymphotropic virus type 1 isolate TSP/HAM long terminal repeat, partial sequence Length = 539 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 36 gaggccgccatccacgccggttgagtcgcgttctgc 71
>gb|AF228944.1| Human T-cell lymphotropic virus type 1 isolate TSP/HAM long terminal repeat, partial sequence Length = 471 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 36 gaggccgccatccacgccggttgagtcgcgttctgc 71
>gb|AF228943.1| Human T-cell lymphotropic virus type 1 isolate TSP/HAM long terminal repeat, partial sequence Length = 407 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 36 gaggccgccatccacgccggttgagtcgcgttctgc 71
>gb|AF228942.1| Human T-cell lymphotropic virus type 1 isolate TSP/HAM long terminal repeat, partial sequence Length = 407 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 36 gaggccgccatccacgccggttgagtcgcgttctgc 71
>gb|AF228940.1| Human T-cell lymphotropic virus type 1 isolate TSP/HAM long terminal repeat, partial sequence Length = 407 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 36 gaggccgccatccacgccggttgagtcgcgttctgc 71
>gb|AF228939.1| Human T-cell lymphotropic virus type 1 isolate TSP/HAM long terminal repeat, partial sequence Length = 762 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 36 gaggccgccatccacgccggttgagtcgcgttctgc 71
>gb|AF228938.1| Human T-cell lymphotropic virus type 1 isolate TSP/HAM long terminal repeat, partial sequence Length = 409 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 36 gaggccgccatccacgccggttgagtcgcgttctgc 71
>gb|AF228937.1| Human T-cell lymphotropic virus type 1 isolate TSP/HAM long terminal repeat, partial sequence Length = 461 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 36 gaggccgccatccacgccggttgagtcgcgttctgc 71
>gb|AF228936.1| Human T-cell lymphotropic virus type 1 isolate TSP/HAM long terminal repeat, partial sequence Length = 461 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 36 gaggccgccatccacgccggttgagtcgcgttctgc 71
>gb|AF228935.1| Human T-cell lymphotropic virus type 1 isolate TSP/HAM long terminal repeat, partial sequence Length = 577 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 36 gaggccgccatccacgccggttgagtcgcgttctgc 71
>gb|AF228934.1| Human T-cell lymphotropic virus type 1 isolate TSP/HAM long terminal repeat, partial sequence Length = 577 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 36 gaggccgccatccacgccggttgagtcgcgttctgc 71
>gb|AF228933.1| Human T-cell lymphotropic virus type 1 isolate TSP/HAM long terminal repeat, partial sequence Length = 617 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 36 gaggccgccatccacgccggttgagtcgcgttctgc 71
>gb|AF228932.1| Human T-cell lymphotropic virus type 1 isolate TSP/HAM long terminal repeat, partial sequence Length = 459 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 36 gaggccgccatccacgccggttgagtcgcgttctgc 71
>gb|AF228931.1| Human T-cell lymphotropic virus type 1 isolate TSP/HAM long terminal repeat, partial sequence Length = 459 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 36 gaggccgccatccacgccggttgagtcgcgttctgc 71
>gb|AF228930.1| Human T-cell lymphotropic virus type 1 isolate TSP/HAM long terminal repeat, partial sequence Length = 459 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 36 gaggccgccatccacgccggttgagtcgcgttctgc 71
>gb|AF228929.1| Human T-cell lymphotropic virus type 1 isolate TSP/HAM long terminal repeat, partial sequence Length = 461 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 36 gaggccgccatccacgccggttgagtcgcgttctgc 71
>gb|AF228928.1| Human T-cell lymphotropic virus type 1 isolate TSP/HAM long terminal repeat, partial sequence Length = 460 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 36 gaggccgccatccacgccggttgagtcgcgttctgc 71
>gb|AF228927.1| Human T-cell lymphotropic virus type 1 isolate TSP/HAM long terminal repeat, partial sequence Length = 461 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 36 gaggccgccatccacgccggttgagtcgcgttctgc 71
>gb|AF228926.1| Human T-cell lymphotropic virus type 1 isolate TSP/HAM long terminal repeat, partial sequence Length = 461 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 36 gaggccgccatccacgccggttgagtcgcgttctgc 71
>gb|AY333376.1| Simian T-lymphotropic virus 1 isolate STLV-wrc14/97 3' LTR, partial sequence; and tax protein gene, partial cds Length = 547 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 376 gaggccgccatccacgccggttgagtcgcgttctgc 411
>gb|AY267836.1| Simian T-lymphotropic virus 1 isolate Ptr-Rafiki-I tax protein (tax) gene, partial cds; and 3' long terminal repeat, partial sequence Length = 470 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 432 gaggccgccatccacgccggttgagtcgcgttctgc 467
>gb|AY267835.1| Simian T-lymphotropic virus 1 isolate Ptr-Loukoum tax protein (tax) gene, partial cds; and 3' long terminal repeat, partial sequence Length = 929 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 728 gaggccgccatccacgccggttgagtcgcgttctgc 763
>gb|AF539747.1| Simian T-lymphotropic virus 1 isolate Ptr-Leo tax protein gene, partial cds; and long terminal repeat, partial sequence Length = 1630 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 1314 gaggccgccatccacgccggttgagtcgcgttctgc 1349
>gb|AY324788.1| Human T-lymphotropic virus 1 isolate Br4 tax protein gene, partial cds; and 3' long terminal repeat, complete sequence Length = 748 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 384 gaggccgccatccacgccggttgagtcgcgttctgc 419
>gb|AY324787.1| Human T-lymphotropic virus 1 isolate Pe491 tax protein gene, partial cds; and 3' long terminal repeat, complete sequence Length = 756 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 392 gaggccgccatccacgccggttgagtcgcgttctgc 427
>gb|AY324786.1| Human T-lymphotropic virus 1 isolate Pe488 tax protein gene, partial cds; and 3' long terminal repeat, complete sequence Length = 756 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 392 gaggccgccatccacgccggttgagtcgcgttctgc 427
>gb|AY324785.1| Human T-lymphotropic virus 1 isolate FrGu1 tax protein gene, partial cds; and 3' long terminal repeat, complete sequence Length = 757 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 393 gaggccgccatccacgccggttgagtcgcgttctgc 428
>gb|AY324783.1| Human T-lymphotropic virus 1 isolate Ar5 tax protein gene, partial cds; and 3' long terminal repeat, complete sequence Length = 756 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 392 gaggccgccatccacgccggttgagtcgcgttctgc 427
>gb|AY324782.1| Human T-lymphotropic virus 1 isolate Ar55 tax protein gene, partial cds; and 3' long terminal repeat, complete sequence Length = 756 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 392 gaggccgccatccacgccggttgagtcgcgttctgc 427
>gb|AY324781.1| Human T-lymphotropic virus 1 isolate Ar49 tax protein gene, partial cds; and 3' long terminal repeat, complete sequence Length = 756 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 392 gaggccgccatccacgccggttgagtcgcgttctgc 427
>gb|AY324780.1| Human T-lymphotropic virus 1 isolate Ar47 tax protein gene, partial cds; and 3' long terminal repeat, complete sequence Length = 756 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 392 gaggccgccatccacgccggttgagtcgcgttctgc 427
>gb|AY324779.1| Human T-lymphotropic virus 1 isolate Ar44 tax protein gene, partial cds; and 3' long terminal repeat, complete sequence Length = 756 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 392 gaggccgccatccacgccggttgagtcgcgttctgc 427
>gb|AY324778.1| Human T-lymphotropic virus 1 isolate Ar15 tax protein gene, partial cds; and 3' long terminal repeat, complete sequence Length = 756 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 392 gaggccgccatccacgccggttgagtcgcgttctgc 427
>gb|AY324777.1| Human T-lymphotropic virus 1 isolate Ar11 tax protein gene, partial cds; and 3' long terminal repeat, complete sequence Length = 753 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 392 gaggccgccatccacgccggttgagtcgcgttctgc 427
>gb|AF033817.1| Human T-cell lymphotropic virus 1, complete genome Length = 8507 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 8318 gaggccgccatccacgccggttgagtcgcgttctgc 8353 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 39 gaggccgccatccacgccggttgagtcgcgttctgc 74
>gb|AF494241.1| Human T-cell lymphotropic virus 1 isolate ES-TMD tax protein (tax) gene, partial cds; and long terminal repeat, partial sequence Length = 740 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 375 gaggccgccatccacgccggttgagtcgcgttctgc 410
>gb|AF494240.1| Human T-cell lymphotropic virus 1 isolate ES-TRR2 tax protein (tax) gene, partial cds; and long terminal repeat, partial sequence Length = 740 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 375 gaggccgccatccacgccggttgagtcgcgttctgc 410
>gb|AF494239.1| Human T-cell lymphotropic virus 1 isolate ES-TRR1 tax protein (tax) gene, partial cds; and long terminal repeat, partial sequence Length = 740 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 375 gaggccgccatccacgccggttgagtcgcgttctgc 410
>gb|AF494238.1| Human T-cell lymphotropic virus 1 isolate ES-TRH tax protein (tax) gene, partial cds; and long terminal repeat, partial sequence Length = 740 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 375 gaggccgccatccacgccggttgagtcgcgttctgc 410
>gb|AY263382.1| Simian T-lymphotropic virus 1 isolate GGO-Cam12 tax protein gene, partial cds; and long terminal repeat, complete sequence Length = 757 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 393 gaggccgccatccacgccggttgagtcgcgttctgc 428
>gb|AY263381.1| Simian T-lymphotropic virus 1 isolate PTR-CAM43 tax protein gene, partial cds; and long terminal repeat, complete sequence Length = 757 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 392 gaggccgccatccacgccggttgagtcgcgttctgc 427
>gb|AY183908.1| Human T-lymphotropic virus 1 isolate ES02-JCP long terminal repeat, partial sequence Length = 563 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 304 gaggccgccatccacgccggttgagtcgcgttctgc 339
>gb|AY183907.1| Human T-lymphotropic virus 1 isolate ES02-ECM long terminal repeat, partial sequence Length = 536 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 284 gaggccgccatccacgccggttgagtcgcgttctgc 319
>gb|AF529963.1| Human T-lymphotropic virus 1 isolate GT895 tax protein gene, partial cds; and long terminal repeat, partial sequence Length = 749 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 384 gaggccgccatccacgccggttgagtcgcgttctgc 419
>gb|AF529962.1| Human T-lymphotropic virus 1 isolate GT551 tax protein gene, partial cds; and long terminal repeat, partial sequence Length = 730 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 365 gaggccgccatccacgccggttgagtcgcgttctgc 400
>gb|AF529961.1| Human T-lymphotropic virus 1 isolate GP35 tax protein gene, partial cds; and long terminal repeat, partial sequence Length = 750 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 385 gaggccgccatccacgccggttgagtcgcgttctgc 420
>gb|AF529960.1| Human T-lymphotropic virus 1 isolate GP299 tax protein gene, partial cds; and long terminal repeat, partial sequence Length = 750 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 385 gaggccgccatccacgccggttgagtcgcgttctgc 420
>gb|AF529959.1| Human T-lymphotropic virus 1 isolate GP27 tax protein gene, partial cds; and long terminal repeat, partial sequence Length = 740 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 375 gaggccgccatccacgccggttgagtcgcgttctgc 410
>gb|AF529958.1| Human T-lymphotropic virus 1 isolate GP219 tax protein gene, partial cds; and long terminal repeat, partial sequence Length = 748 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 383 gaggccgccatccacgccggttgagtcgcgttctgc 418
>gb|AF529957.1| Human T-lymphotropic virus 1 isolate GP2 tax protein gene, partial cds; and long terminal repeat, partial sequence Length = 740 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 375 gaggccgccatccacgccggttgagtcgcgttctgc 410
>gb|AF529956.1| Human T-lymphotropic virus 1 isolate GM778 tax protein gene, partial cds; and long terminal repeat, partial sequence Length = 741 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 376 gaggccgccatccacgccggttgagtcgcgttctgc 411
>gb|AF529955.1| Human T-lymphotropic virus 1 isolate GM599 tax protein gene, partial cds; and long terminal repeat, partial sequence Length = 734 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 369 gaggccgccatccacgccggttgagtcgcgttctgc 404
>emb|BX061706.1|CNS09JRY Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC42CF08 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 270 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Minus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 253 gaggccgccatccacgccggttgagtcgcgttctgc 218
>gb|DQ182415.1| Human T-lymphotropic virus 1 isolate ArJ54-2 LTR, partial sequence Length = 593 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 243 gaggccgccatccacgccggttgagtcgcgttctgc 278
>gb|DQ182414.1| Human T-lymphotropic virus 1 isolate ArCBA-noju LTR, partial sequence Length = 642 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 292 gaggccgccatccacgccggttgagtcgcgttctgc 327
>gb|DQ182413.1| Human T-lymphotropic virus 1 isolate ArJ22-2 LTR, partial sequence Length = 643 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 293 gaggccgccatccacgccggttgagtcgcgttctgc 328
>gb|DQ182412.1| Human T-lymphotropic virus 1 isolate ArJ22-1 LTR, partial sequence Length = 593 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 257 gaggccgccatccacgccggttgagtcgcgttctgc 292
>gb|DQ182411.1| Human T-lymphotropic virus 1 isolate ArJ44-1 LTR, partial sequence Length = 599 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 247 gaggccgccatccacgccggttgagtcgcgttctgc 282
>gb|DQ182410.1| Human T-lymphotropic virus 1 isolate ArJ20-1 LTR, partial sequence Length = 627 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 253 gaggccgccatccacgccggttgagtcgcgttctgc 288
>gb|DQ182409.1| Human T-lymphotropic virus 1 isolate ArJ29-1 LTR, partial sequence Length = 582 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 246 gaggccgccatccacgccggttgagtcgcgttctgc 281
>gb|DQ182408.1| Human T-lymphotropic virus 1 isolate ArJ1-4 LTR, partial sequence Length = 624 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 251 gaggccgccatccacgccggttgagtcgcgttctgc 286
>gb|DQ182407.1| Human T-lymphotropic virus 1 isolate ArJ33-7 LTR, partial sequence Length = 664 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 292 gaggccgccatccacgccggttgagtcgcgttctgc 327
>gb|DQ182406.1| Human T-lymphotropic virus 1 isolate ArJ6-1 LTR, partial sequence Length = 607 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 258 gaggccgccatccacgccggttgagtcgcgttctgc 293
>gb|DQ182405.1| Human T-lymphotropic virus 1 isolate ArJ20-2 LTR, partial sequence Length = 631 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 266 gaggccgccatccacgccggttgagtcgcgttctgc 301
>gb|DQ182404.1| Human T-lymphotropic virus 1 isolate ArJ19-3 LTR, partial sequence Length = 604 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 256 gaggccgccatccacgccggttgagtcgcgttctgc 291
>gb|DQ182403.1| Human T-lymphotropic virus 1 isolate ArJ4-1 LTR, partial sequence Length = 603 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 255 gaggccgccatccacgccggttgagtcgcgttctgc 290
>gb|DQ182402.1| Human T-lymphotropic virus 1 isolate ArJ55-2 LTR, partial sequence Length = 607 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 257 gaggccgccatccacgccggttgagtcgcgttctgc 292
>gb|DQ182401.1| Human T-lymphotropic virus 1 isolate ArJ48-1 LTR, partial sequence Length = 602 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 252 gaggccgccatccacgccggttgagtcgcgttctgc 287
>gb|DQ182400.1| Human T-lymphotropic virus 1 isolate ArJ42-1 LTR, partial sequence Length = 631 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 256 gaggccgccatccacgccggttgagtcgcgttctgc 291
>gb|DQ182399.1| Human T-lymphotropic virus 1 isolate ArJ40-2 LTR, partial sequence Length = 622 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 255 gaggccgccatccacgccggttgagtcgcgttctgc 290
>gb|DQ182398.1| Human T-lymphotropic virus 1 isolate ArJ54-3 LTR, partial sequence Length = 644 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 269 gaggccgccatccacgccggttgagtcgcgttctgc 304
>gb|DQ182397.1| Human T-lymphotropic virus 1 isolate ArJ34-1 LTR, partial sequence Length = 608 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 252 gaggccgccatccacgccggttgagtcgcgttctgc 287
>gb|DQ182396.1| Human T-lymphotropic virus 1 isolate ArJ29-3 LTR, partial sequence Length = 628 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 253 gaggccgccatccacgccggttgagtcgcgttctgc 288
>gb|DQ182395.1| Human T-lymphotropic virus 1 isolate ArJ30-2 LTR, partial sequence Length = 571 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 239 gaggccgccatccacgccggttgagtcgcgttctgc 274
>gb|DQ182394.1| Human T-lymphotropic virus 1 isolate ArJ30-1 LTR, partial sequence Length = 602 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 252 gaggccgccatccacgccggttgagtcgcgttctgc 287
>gb|DQ182393.1| Human T-lymphotropic virus 1 isolate ArJ35-2 LTR, partial sequence Length = 602 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 252 gaggccgccatccacgccggttgagtcgcgttctgc 287
>gb|DQ182392.1| Human T-lymphotropic virus 1 isolate ArJ65-2 LTR, partial sequence Length = 630 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 258 gaggccgccatccacgccggttgagtcgcgttctgc 293
>gb|DQ182391.1| Human T-lymphotropic virus 1 isolate ArJ47-2 LTR, partial sequence Length = 603 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 253 gaggccgccatccacgccggttgagtcgcgttctgc 288
>gb|DQ182390.1| Human T-lymphotropic virus 1 isolate ArJ47-1 LTR, partial sequence Length = 609 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 253 gaggccgccatccacgccggttgagtcgcgttctgc 288
>gb|DQ182389.1| Human T-lymphotropic virus 1 isolate ArJ19-1 LTR, partial sequence Length = 609 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 253 gaggccgccatccacgccggttgagtcgcgttctgc 288
>gb|DQ182388.1| Human T-lymphotropic virus 1 isolate ArJ11-3 LTR, partial sequence Length = 593 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 252 gaggccgccatccacgccggttgagtcgcgttctgc 287
>gb|DQ182387.1| Human T-lymphotropic virus 1 isolate ArJ11-4 LTR, partial sequence Length = 619 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 256 gaggccgccatccacgccggttgagtcgcgttctgc 291
>gb|DQ182386.1| Human T-lymphotropic virus 1 isolate ArJ11-2 LTR, partial sequence Length = 604 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 252 gaggccgccatccacgccggttgagtcgcgttctgc 287
>gb|DQ182385.1| Human T-lymphotropic virus 1 isolate ArJ15-1 LTR, partial sequence Length = 601 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 253 gaggccgccatccacgccggttgagtcgcgttctgc 288
>gb|DQ182384.1| Human T-lymphotropic virus 1 isolate ArJ14-2 LTR, partial sequence Length = 588 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 254 gaggccgccatccacgccggttgagtcgcgttctgc 289
>gb|DQ182383.1| Human T-lymphotropic virus 1 isolate ArJ14-1 LTR, partial sequence Length = 604 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 254 gaggccgccatccacgccggttgagtcgcgttctgc 289
>gb|DQ182382.1| Human T-lymphotropic virus 1 isolate ArJ16-3 LTR, partial sequence Length = 595 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 252 gaggccgccatccacgccggttgagtcgcgttctgc 287
>gb|DQ182381.1| Human T-lymphotropic virus 1 isolate ArJ16-1 LTR, partial sequence Length = 608 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 252 gaggccgccatccacgccggttgagtcgcgttctgc 287
>gb|DQ182380.1| Human T-lymphotropic virus 1 isolate ArJ28-3 LTR, partial sequence Length = 593 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 252 gaggccgccatccacgccggttgagtcgcgttctgc 287
>gb|DQ182379.1| Human T-lymphotropic virus 1 isolate ArJ1-2 LTR, partial sequence Length = 554 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 221 gaggccgccatccacgccggttgagtcgcgttctgc 256
>gb|DQ182378.1| Human T-lymphotropic virus 1 isolate ArJ1-1 LTR, partial sequence Length = 628 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 255 gaggccgccatccacgccggttgagtcgcgttctgc 290
>gb|DQ182377.1| Human T-lymphotropic virus 1 isolate ArJ32-1 LTR, partial sequence Length = 604 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 254 gaggccgccatccacgccggttgagtcgcgttctgc 289
>gb|DQ182376.1| Human T-lymphotropic virus 1 isolate ArJ3-4 LTR, partial sequence Length = 582 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 252 gaggccgccatccacgccggttgagtcgcgttctgc 287
>gb|DQ182375.1| Human T-lymphotropic virus 1 isolate ArJ3-3 LTR, partial sequence Length = 591 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 254 gaggccgccatccacgccggttgagtcgcgttctgc 289
>gb|DQ182374.1| Human T-lymphotropic virus 1 isolate ArJ3-1 LTR, partial sequence Length = 606 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 256 gaggccgccatccacgccggttgagtcgcgttctgc 291
>gb|DQ182373.1| Human T-lymphotropic virus 1 isolate ArCBA-sego LTR, partial sequence Length = 643 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 281 gaggccgccatccacgccggttgagtcgcgttctgc 316
>gb|DQ182372.1| Human T-lymphotropic virus 1 isolate ArJ25-2 LTR, partial sequence Length = 604 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 253 gaggccgccatccacgccggttgagtcgcgttctgc 288
>gb|DQ182371.1| Human T-lymphotropic virus 1 isolate ArJ25-1 LTR, partial sequence Length = 631 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 279 gaggccgccatccacgccggttgagtcgcgttctgc 314
>gb|DQ182370.1| Human T-lymphotropic virus 1 isolate ArJ54-1 LTR, partial sequence Length = 603 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 256 gaggccgccatccacgccggttgagtcgcgttctgc 291
>gb|DQ182369.1| Human T-lymphotropic virus 1 isolate ArJ11-5 LTR, partial sequence Length = 618 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 266 gaggccgccatccacgccggttgagtcgcgttctgc 301
>gb|DQ182368.1| Human T-lymphotropic virus 1 isolate ArJ11-1 LTR, partial sequence Length = 614 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 266 gaggccgccatccacgccggttgagtcgcgttctgc 301
>gb|DQ182367.1| Human T-lymphotropic virus 1 isolate ArJ65-1 LTR, partial sequence Length = 643 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 292 gaggccgccatccacgccggttgagtcgcgttctgc 327
>gb|DQ182366.1| Human T-lymphotropic virus 1 isolate ArJ1-3 LTR, partial sequence Length = 590 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 256 gaggccgccatccacgccggttgagtcgcgttctgc 291
>gb|DQ182365.1| Human T-lymphotropic virus 1 isolate ArJ35-3 LTR, partial sequence Length = 589 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 253 gaggccgccatccacgccggttgagtcgcgttctgc 288
>gb|DQ182364.1| Human T-lymphotropic virus 1 isolate ArJ2-2 LTR, partial sequence Length = 616 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 266 gaggccgccatccacgccggttgagtcgcgttctgc 301
>gb|DQ182363.1| Human T-lymphotropic virus 1 isolate ArJ2-1 LTR, partial sequence Length = 604 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 255 gaggccgccatccacgccggttgagtcgcgttctgc 290
>gb|DQ182362.1| Human T-lymphotropic virus 1 isolate ArJ29-2 LTR, partial sequence Length = 602 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 252 gaggccgccatccacgccggttgagtcgcgttctgc 287
>gb|DQ182361.1| Human T-lymphotropic virus 1 isolate ArJ13-1 LTR, partial sequence Length = 616 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 253 gaggccgccatccacgccggttgagtcgcgttctgc 288
>gb|DQ182360.1| Human T-lymphotropic virus 1 isolate ArJ3-2 LTR, partial sequence Length = 580 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 251 gaggccgccatccacgccggttgagtcgcgttctgc 286
>gb|DQ182356.1| Human T-lymphotropic virus 1 isolate ArJ43-2 LTR, partial sequence Length = 654 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 284 gaggccgccatccacgccggttgagtcgcgttctgc 319
>gb|DQ182355.1| Human T-lymphotropic virus 1 isolate ArJ43-1 LTR, partial sequence Length = 624 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 254 gaggccgccatccacgccggttgagtcgcgttctgc 289
>gb|AY040796.1| Human T-cell lymphotropic virus type 1 tax protein (tax) gene, partial cds; and 3' long terminal repeat, partial sequence Length = 693 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 361 gaggccgccatccacgccggttgagtcgcgttctgc 396
>gb|AY040795.1| Human T-cell lymphotropic virus type 1 tax protein (tax) gene, partial cds; and 3' long terminal repeat, partial sequence Length = 693 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 361 gaggccgccatccacgccggttgagtcgcgttctgc 396
>gb|AY040794.1| Human T-cell lymphotropic virus type 1 tax protein (tax) gene, partial cds; and 3' long terminal repeat, partial sequence Length = 693 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 361 gaggccgccatccacgccggttgagtcgcgttctgc 396
>gb|AY040793.1| Human T-cell lymphotropic virus type 1 tax protein (tax) gene, partial cds; and 3' long terminal repeat, partial sequence Length = 695 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 363 gaggccgccatccacgccggttgagtcgcgttctgc 398
>gb|AY040792.1| Human T-cell lymphotropic virus type 1 tax protein (tax) gene, partial cds; and 3' long terminal repeat, partial sequence Length = 694 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 362 gaggccgccatccacgccggttgagtcgcgttctgc 397
>gb|AY040791.1| Human T-cell lymphotropic virus type 1 tax protein (tax) gene, partial cds; and 3' long terminal repeat, partial sequence Length = 693 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 361 gaggccgccatccacgccggttgagtcgcgttctgc 396
>gb|AY040790.1| Human T-cell lymphotropic virus type 1 tax protein (tax) gene, partial cds; and 3' long terminal repeat, partial sequence Length = 693 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 361 gaggccgccatccacgccggttgagtcgcgttctgc 396
>gb|AY040789.1| Human T-cell lymphotropic virus type 1 tax protein (tax) gene, partial cds; and 3' long terminal repeat, partial sequence Length = 693 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 361 gaggccgccatccacgccggttgagtcgcgttctgc 396
>gb|AY040788.1| Human T-cell lymphotropic virus type 1 tax protein (tax) gene, partial cds; and 3' long terminal repeat, partial sequence Length = 693 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 361 gaggccgccatccacgccggttgagtcgcgttctgc 396
>gb|AY040787.1| Human T-cell lymphotropic virus type 1 tax protein (tax) gene, partial cds; and 3' long terminal repeat, partial sequence Length = 695 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 363 gaggccgccatccacgccggttgagtcgcgttctgc 398
>gb|AY040786.1| Human T-cell lymphotropic virus type 1 tax protein (tax) gene, partial cds; and 3' long terminal repeat, partial sequence Length = 695 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 363 gaggccgccatccacgccggttgagtcgcgttctgc 398
>dbj|D82951.1|HIVSIB220F Human T-lymphotropic virus 1 genomic RNA, LTR region, clone:SIB220 Length = 507 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 271 gaggccgccatccacgccggttgagtcgcgttctgc 306
>dbj|D82950.1|HIVSIB190E Human T-lymphotropic virus 1 genomic RNA, LTR region, clone:SIB190 Length = 507 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 271 gaggccgccatccacgccggttgagtcgcgttctgc 306
>dbj|D82949.1|HIVCOL443D Human T-lymphotropic virus 1 genomic RNA, LTR region, clone:COL443 Length = 507 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 271 gaggccgccatccacgccggttgagtcgcgttctgc 306
>dbj|D82947.1|HIVCOL013B Human T-lymphotropic virus 1 genomic RNA, LTR region, clone:COL013 Length = 507 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 271 gaggccgccatccacgccggttgagtcgcgttctgc 306
>dbj|D82946.1|HIVCOL001A Human T-lymphotropic virus 1 genomic RNA, LTR region, clone:COL001 Length = 507 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 271 gaggccgccatccacgccggttgagtcgcgttctgc 306
>dbj|AB219938.1| Human T-lymphotropic virus 1 HBZ-SI mRNA for bZIP factor splicing isoform, complete cds Length = 1088 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Minus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 197 gaggccgccatccacgccggttgagtcgcgttctgc 162
>gb|AF384872.1| Simian T-cell lymphotropic virus type 1 isolate CAG-DJA.853 tax protein gene, partial sequence and long terminal repeat, complete sequence Length = 755 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 392 gaggccgccatccacgccggttgagtcgcgttctgc 427
>gb|AF384871.1| Simian T-cell lymphotropic virus type 1 isolate PTR-CAR.875 tax protein gene, partial sequence and long terminal repeat, complete sequence Length = 756 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 392 gaggccgccatccacgccggttgagtcgcgttctgc 427
>gb|AY269836.1| Human T-lymphotropic virus 1 isolate 9HU-Col long terminal repeat, partial sequence Length = 624 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 257 gaggccgccatccacgccggttgagtcgcgttctgc 292
>gb|AY269835.1| Human T-lymphotropic virus 1 isolate 5HU-Col long terminal repeat, partial sequence Length = 617 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 257 gaggccgccatccacgccggttgagtcgcgttctgc 292
>gb|AY269834.1| Human T-lymphotropic virus 1 isolate 3HU-Col long terminal repeat, partial sequence Length = 616 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 256 gaggccgccatccacgccggttgagtcgcgttctgc 291
>gb|AY269832.1| Human T-lymphotropic virus 1 isolate 2189-Col long terminal repeat, partial sequence Length = 616 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 256 gaggccgccatccacgccggttgagtcgcgttctgc 291
>gb|AY269831.1| Human T-lymphotropic virus 1 isolate 962-Col long terminal repeat, partial sequence Length = 617 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 257 gaggccgccatccacgccggttgagtcgcgttctgc 292
>gb|AY269829.1| Human T-lymphotropic virus 1 isolate 233-Col long terminal repeat, partial sequence Length = 624 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 257 gaggccgccatccacgccggttgagtcgcgttctgc 292
>gb|AY269828.1| Human T-lymphotropic virus 1 isolate 220-Col long terminal repeat, partial sequence Length = 624 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 257 gaggccgccatccacgccggttgagtcgcgttctgc 292
>gb|AY269827.1| Human T-lymphotropic virus 1 isolate 108-Col long terminal repeat, partial sequence Length = 624 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 257 gaggccgccatccacgccggttgagtcgcgttctgc 292
>dbj|AB036354.1| Human T-lymphotropic virus 1 DNA, LTR region, isolate:HC7B Length = 603 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 274 gaggccgccatccacgccggttgagtcgcgttctgc 309
>dbj|AB036353.1| Human T-lymphotropic virus 1 DNA, LTR region, isolate:HC5B Length = 593 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 265 gaggccgccatccacgccggttgagtcgcgttctgc 300
>dbj|AB036351.1| Human T-lymphotropic virus 1 DNA, LTR region, isolate:HC66A Length = 601 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 273 gaggccgccatccacgccggttgagtcgcgttctgc 308
>dbj|AB036349.1| Human T-lymphotropic virus 1 DNA, LTR region, isolate:HAM284A Length = 601 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 273 gaggccgccatccacgccggttgagtcgcgttctgc 308
>dbj|AB036348.1| Human T-lymphotropic virus 1 DNA, LTR region, isolate:HC1020A Length = 601 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 273 gaggccgccatccacgccggttgagtcgcgttctgc 308
>dbj|AB030745.1| Human T-lymphotropic virus 1 proviral LTR sequence, clone:CHI430 Length = 507 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 271 gaggccgccatccacgccggttgagtcgcgttctgc 306
>dbj|AB030744.1| Human T-lymphotropic virus 1 proviral LTR sequence, clone:CHI383 Length = 507 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 271 gaggccgccatccacgccggttgagtcgcgttctgc 306
>dbj|AB030743.1| Human T-lymphotropic virus 1 proviral LTR sequence, clone:KAG130 Length = 506 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 270 gaggccgccatccacgccggttgagtcgcgttctgc 305
>gb|AF438766.1| Human T-cell lymphotropic virus type 1 seroconverter case 3 long terminal repeat, partial sequence Length = 501 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 263 gaggccgccatccacgccggttgagtcgcgttctgc 298
>gb|AF438765.1| Human T-cell lymphotropic virus type 1 seroconverter case 2 long terminal repeat, partial sequence Length = 501 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 263 gaggccgccatccacgccggttgagtcgcgttctgc 298
>gb|AF485383.1| Human T-cell lymphotropic virus type 1 from Spain long terminal repeat, partial sequence Length = 598 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 272 gaggccgccatccacgccggttgagtcgcgttctgc 307
>gb|AF485382.1| Human T-cell lymphotropic virus type 1 from Spain long terminal repeat, partial sequence Length = 608 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 274 gaggccgccatccacgccggttgagtcgcgttctgc 309
>gb|AY920503.1| Human T-lymphotropic virus 1 strain Bel10564 5' LTR, partial sequence Length = 522 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 290 gaggccgccatccacgccggttgagtcgcgttctgc 325
>gb|AY920498.1| Human T-lymphotropic virus 1 strain Bel10420 5' LTR, partial sequence Length = 522 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 290 gaggccgccatccacgccggttgagtcgcgttctgc 325
>gb|L60024.1|STLLTRB Simian T-cell lymphotropic virus 1 (isolate Pcy2304) long terminal repeat Length = 705 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 363 gaggccgccatccacgccggttgagtcgcgttctgc 398
>gb|J02030.1|HTVPRO1 Integrated human T-cell lymphotropic virus type I, proviral 5' LTR Length = 805 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 412 gaggccgccatccacgccggttgagtcgcgttctgc 447
>gb|AY026855.1| Simian T-cell lymphotropic virus type 1 CTO-601 tax protein (tax) gene, partial cds; and long terminal repeat, complete sequence Length = 755 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 392 gaggccgccatccacgccggttgagtcgcgttctgc 427
>gb|AY026854.1| Simian T-cell lymphotropic virus type 1 CNI-1001 tax protein (tax) gene, partial cds; and long terminal repeat, complete sequence Length = 755 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 392 gaggccgccatccacgccggttgagtcgcgttctgc 427
>gb|AY026853.1| Simian T-cell lymphotropic virus type 1 CMO-1401 tax protein (tax) gene, partial cds; and long terminal repeat, complete sequence Length = 756 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 392 gaggccgccatccacgccggttgagtcgcgttctgc 427
>gb|AY026852.1| Simian T-cell lymphotropic virus type 1 CAE-1301 tax protein (tax) gene, partial cds; and long terminal repeat, complete sequence Length = 755 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 392 gaggccgccatccacgccggttgagtcgcgttctgc 427
>gb|AY026848.1| Simian T-cell lymphotropic virus type 1 CAE-AGM03 tax protein (tax) gene, partial cds; and long terminal repeat, complete sequence Length = 754 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 391 gaggccgccatccacgccggttgagtcgcgttctgc 426
>gb|AY026847.1| Simian T-cell lymphotropic virus type 1 CAE-AGM511 tax protein (tax) gene, partial cds; and long terminal repeat, complete sequence Length = 754 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 391 gaggccgccatccacgccggttgagtcgcgttctgc 426
>gb|AY026846.1| Simian T-cell lymphotropic virus type 1 CAE-AGM535 tax protein (tax) gene, partial cds; and long terminal repeat, complete sequence Length = 754 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 391 gaggccgccatccacgccggttgagtcgcgttctgc 426
>gb|AY026845.1| Simian T-cell lymphotropic virus type 1 CMI-MIT tax protein (tax) gene, partial cds; and long terminal repeat, complete sequence Length = 747 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 384 gaggccgccatccacgccggttgagtcgcgttctgc 419
>gb|AY026844.1| Simian T-cell lymphotropic virus type 1 PAN-614 tax protein (tax) gene, partial cds; and long terminal repeat, complete sequence Length = 759 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 396 gaggccgccatccacgccggttgagtcgcgttctgc 431
>gb|AY026843.1| Simian T-cell lymphotropic virus type 1 PAN-622 tax protein (tax) gene, partial cds; and long terminal repeat, complete sequence Length = 757 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 394 gaggccgccatccacgccggttgagtcgcgttctgc 429
>gb|AY026842.1| Simian T-cell lymphotropic virus type 1 PAN-623 tax protein (tax) gene, partial cds; and long terminal repeat, complete sequence Length = 759 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 395 gaggccgccatccacgccggttgagtcgcgttctgc 430
>gb|AF222019.1|AF222019 Human T-cell lymphotropic virus type 1 U8306 5' long terminal repeat, partial sequence Length = 508 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 272 gaggccgccatccacgccggttgagtcgcgttctgc 307
>gb|S81555.1| HTLV-I R-IL-15 fusion gene {junction region} [human, adult T-cell leukemia cell line HuT-102, mRNA Partial Mutant, 204 nt] Length = 204 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 22 gaggccgccatccacgccggttgagtcgcgttctgc 57
>gb|S74562.1| gag=Gag...pol [human T-lymphotropic virus type 1 HTLV-1, Zairian isolate, HTLV-1EL, Genomic, 3 genes, 5186 nt] Length = 5186 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 392 gaggccgccatccacgccggttgagtcgcgttctgc 427
>gb|AY349146.1| Human T-lymphotropic virus 1 isolate ARGF4 LTR, partial sequence Length = 496 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 175 gaggccgccatccacgccggttgagtcgcgttctgc 210
>gb|AY349145.1| Human T-lymphotropic virus 1 isolate ARGF3 LTR, partial sequence Length = 496 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 175 gaggccgccatccacgccggttgagtcgcgttctgc 210
>gb|AY349144.1| Human T-lymphotropic virus 1 isolate ARGF2 LTR, partial sequence Length = 496 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 175 gaggccgccatccacgccggttgagtcgcgttctgc 210
>gb|AY349143.1| Human T-lymphotropic virus 1 isolate ARGF1 LTR, partial sequence Length = 496 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 gaggccgccatccacgccggttgagtcgcgttctgc 36 |||||||||||||||||||||||||||||||||||| Sbjct: 175 gaggccgccatccacgccggttgagtcgcgttctgc 210 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 82,532 Number of Sequences: 3902068 Number of extensions: 82532 Number of successful extensions: 23500 Number of sequences better than 10.0: 909 Number of HSP's better than 10.0 without gapping: 908 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 22430 Number of HSP's gapped (non-prelim): 1070 length of query: 36 length of database: 17,233,045,268 effective HSP length: 20 effective length of query: 16 effective length of database: 17,155,003,908 effective search space: 274480062528 effective search space used: 274480062528 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 18 (36.2 bits)