ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart24a05 |
|---|---|
| Clone Library Name | barley_pub |
>GRP8_ARATH (Q03251) Glycine-rich RNA-binding protein 8 (CCR1 protein)| Length = 169 Score = 33.1 bits (74), Expect = 0.16 Identities = 23/57 (40%), Positives = 24/57 (42%) Frame = -1 Query: 365 RGSYGEAHRGYASGRYESFGERPDYPEFHGGGQGRDLGFEHRGQYPGGRAYNSGGRR 195 RG G +R G Y S G Y GGG R G G GGR Y GGRR Sbjct: 94 RGGSGGGYRSGGGGGY-SGGGGGGYSGGGGGGYERRSGGYGSGGGGGGRGYGGGGRR 149
>SQD_DROME (Q08473) RNA-binding protein squid (Heterogeneous nuclear| ribonucleoprotein 40) (HNRNP 40) Length = 344 Score = 33.1 bits (74), Expect = 0.16 Identities = 23/60 (38%), Positives = 27/60 (45%), Gaps = 2/60 (3%) Frame = -1 Query: 368 SRGSYGEAHRGYASGRYESFGERPDYPEFHGG--GQGRDLGFEHRGQYPGGRAYNSGGRR 195 S G YG + GY +G Y + Y + G G G GFE G Y GG N GG R Sbjct: 253 SYGGYGGGYGGYGAGGYGDYYAGGYYNGYDYGYDGYGYGGGFEGNG-YGGGGGGNMGGGR 311
>DBP2_CANAL (Q59LU0) ATP-dependent RNA helicase DBP2 (EC 3.6.1.-)| Length = 562 Score = 32.7 bits (73), Expect = 0.21 Identities = 21/59 (35%), Positives = 27/59 (45%), Gaps = 2/59 (3%) Frame = -1 Query: 368 SRGSYGEAHRGYASGRYESFGERPDYPEFHGGGQGRDLGFEHR--GQYPGGRAYNSGGR 198 + G Y + G G Y G R + GGG+G G R G Y GGR ++ GGR Sbjct: 4 NNGGYNNRNGGSYGGGYGGGGSRGGRDGYSGGGRGGGYGGGDRDQGGYRGGR-FSGGGR 61
>GRP2_PHAVU (P10496) Glycine-rich cell wall structural protein 1.8 precursor| (GRP 1.8) Length = 465 Score = 32.7 bits (73), Expect = 0.21 Identities = 23/63 (36%), Positives = 26/63 (41%), Gaps = 3/63 (4%) Frame = -1 Query: 380 AAASSRGSYGEAHRGYASGRYESFGERPD-YPEFHGGGQGRDLGF--EHRGQYPGGRAYN 210 A G G G A G Y + GE Y GGG G G EH G Y GG+ Sbjct: 311 AGGEHGGGGGGGQGGGAGGGYAAVGEHGGGYGGGQGGGDGGGYGTGGEHGGGYGGGQGGG 370 Query: 209 SGG 201 +GG Sbjct: 371 AGG 373 Score = 30.8 bits (68), Expect = 0.81 Identities = 24/67 (35%), Positives = 27/67 (40%), Gaps = 7/67 (10%) Frame = -1 Query: 380 AAASSRGSYGEAHRGYASGRYESFGERPD-YPEFHGGGQGRDLGF--EHRGQYPGGR--- 219 A G YG G G Y + GE Y GGG G G EH G Y GG+ Sbjct: 333 AVGEHGGGYGGGQGGGDGGGYGTGGEHGGGYGGGQGGGAGGGYGTGGEHGGGYGGGQGGG 392 Query: 218 -AYNSGG 201 Y +GG Sbjct: 393 GGYGAGG 399 Score = 28.9 bits (63), Expect = 3.1 Identities = 20/60 (33%), Positives = 22/60 (36%) Frame = -1 Query: 380 AAASSRGSYGEAHRGYASGRYESFGERPDYPEFHGGGQGRDLGFEHRGQYPGGRAYNSGG 201 A G G G A G Y + GE HGGG G G G Y G + GG Sbjct: 267 AGGEHGGGAGGGQGGGAGGGYGAGGE-------HGGGAGGGQGGGAGGGYGAGGEHGGGG 319 Score = 28.5 bits (62), Expect = 4.0 Identities = 19/53 (35%), Positives = 24/53 (45%) Frame = -1 Query: 362 GSYGEAHRGYASGRYESFGERPDYPEFHGGGQGRDLGFEHRGQYPGGRAYNSG 204 G YG G A G Y + GE + +GGGQG G+ G + G Y G Sbjct: 361 GGYGGGQGGGAGGGYGTGGE---HGGGYGGGQGGGGGYGAGGDH-GAAGYGGG 409 Score = 27.3 bits (59), Expect = 9.0 Identities = 22/65 (33%), Positives = 24/65 (36%), Gaps = 11/65 (16%) Frame = -1 Query: 362 GSYGEAHRGYASG---------RYESFGERPDYPEFHGGGQGRDLGF--EHRGQYPGGRA 216 G G+ GY G Y GER Y GGG G G EH Y GG Sbjct: 87 GYGGDQGAGYGGGGGSGGGGGVAYGGGGERGGYGGGQGGGAGGGYGAGGEHGIGYGGGGG 146 Query: 215 YNSGG 201 +GG Sbjct: 147 SGAGG 151
>DBP2_YEAST (P24783) ATP-dependent RNA helicase DBP2 (EC 3.6.1.-) (DEAD box| protein 2) (p68-like protein) Length = 546 Score = 32.3 bits (72), Expect = 0.28 Identities = 22/65 (33%), Positives = 25/65 (38%) Frame = -1 Query: 389 PPPAAASSRGSYGEAHRGYASGRYESFGERPDYPEFHGGGQGRDLGFEHRGQYPGGRAYN 210 PP R SYG H Y GR GG+G G+ RG Y GGR Sbjct: 487 PPELLKYDRRSYGGGHPRYGGGR---------------GGRG---GYGRRGGYGGGRGGY 528 Query: 209 SGGRR 195 G R+ Sbjct: 529 GGNRQ 533
>RO21_XENLA (P51989) Heterogeneous nuclear ribonucleoprotein A2 homolog 1| (hnRNP A2(A)) Length = 346 Score = 32.0 bits (71), Expect = 0.36 Identities = 19/59 (32%), Positives = 27/59 (45%), Gaps = 1/59 (1%) Frame = -1 Query: 365 RGSYGEAHRGYASGRYE-SFGERPDYPEFHGGGQGRDLGFEHRGQYPGGRAYNSGGRRF 192 RG + GY G+ ++G P Y GGG G G+ ++G GG N GG + Sbjct: 225 RGYGDNGYNGYGGGQGGGNYGGGPSYGGGRGGGYGGGAGYGNQGGGYGGGYDNYGGGNY 283
>PRP3_RAT (P04474) Acidic proline-rich protein PRP33 precursor (Proline-rich| proteoglycan 1) Length = 206 Score = 31.6 bits (70), Expect = 0.48 Identities = 18/55 (32%), Positives = 23/55 (41%) Frame = -1 Query: 386 PPAAASSRGSYGEAHRGYASGRYESFGERPDYPEFHGGGQGRDLGFEHRGQYPGG 222 PP A+ G ++ G G + G RP+ P HGG R H G P G Sbjct: 49 PPPASDENGDGDDSDDGDDDGSGDD-GNRPERPPPHGGNHQRPPPGHHHGPPPSG 102
>HORN_HUMAN (Q86YZ3) Hornerin| Length = 2850 Score = 31.2 bits (69), Expect = 0.62 Identities = 22/66 (33%), Positives = 28/66 (42%), Gaps = 9/66 (13%) Frame = -1 Query: 374 ASSRGSYGEAHRGYASGRYESFGE------RPDYPEFHGGGQGRDLGFEHR---GQYPGG 222 + S S G RG SG+ S+G R HG G G+ GF H+ GQ G Sbjct: 885 SGSGQSPGHGQRGSGSGQSPSYGRHGSGSGRSSSSGRHGSGSGQSSGFGHKSSSGQSSGY 944 Query: 221 RAYNSG 204 + SG Sbjct: 945 TQHGSG 950 Score = 30.4 bits (67), Expect = 1.1 Identities = 19/60 (31%), Positives = 25/60 (41%), Gaps = 2/60 (3%) Frame = -1 Query: 374 ASSRGSYGEAHRGYASGRYESFGERPDYPEFHGGGQGRDLGFEHRGQYPG--GRAYNSGG 201 A S S G SG+ S+G+ HG G G+ G+ G G G +Y GG Sbjct: 2764 AGSGQSLSHGRHGSGSGQSSSYGQ-------HGSGSGQSSGYSQHGSGSGQDGYSYCKGG 2816
>CUP9_DROME (P27781) Pupal cuticle protein Edg-91 precursor (Ecdysone-dependent| protein 91) Length = 159 Score = 31.2 bits (69), Expect = 0.62 Identities = 25/68 (36%), Positives = 30/68 (44%), Gaps = 5/68 (7%) Frame = -1 Query: 389 PPPAAASSRGSYGEAHRGYASGRYESFGERPDYPEFHGGGQGRDLGFEHR-----GQYPG 225 P A+ G YG + GY FG YP GGG GF HR G YPG Sbjct: 64 PGGYASGYPGGYGGGYSGYNGYGGSGFGGGY-YP---GGGYS---GFGHRPHHHGGYYPG 116 Query: 224 GRAYNSGG 201 G +Y++ G Sbjct: 117 GGSYHNQG 124
>HAND1_HUMAN (O96004) Heart- and neural crest derivatives-expressed protein 1| (Extraembryonic tissues, heart, autonomic nervous system and neural crest derivatives-expressed protein 1) (eHAND) Length = 215 Score = 31.2 bits (69), Expect = 0.62 Identities = 16/34 (47%), Positives = 22/34 (64%), Gaps = 1/34 (2%) Frame = -1 Query: 398 ADTPPPAAASSRGSYG-EAHRGYASGRYESFGER 300 A PPPAAA++ +YG +A G + GR E+ G R Sbjct: 58 AGGPPPAAAAAATAYGPDARPGQSPGRLEALGGR 91
>FBRL2_ARATH (Q94AH9) Fibrillarin-2 (Fibrillarin-like protein)| Length = 320 Score = 31.2 bits (69), Expect = 0.62 Identities = 24/65 (36%), Positives = 27/65 (41%), Gaps = 1/65 (1%) Frame = -1 Query: 386 PPAAASSRG-SYGEAHRGYASGRYESFGERPDYPEFHGGGQGRDLGFEHRGQYPGGRAYN 210 PP S G S G GY+ GR G+ GGG+G GF RG GR Sbjct: 3 PPLTGSGGGFSGGRGRGGYSGGR----GDGGFSGGRGGGGRGGGRGFSDRGGRGRGRGPP 58 Query: 209 SGGRR 195 GG R Sbjct: 59 RGGAR 63
>ROA2_HUMAN (P22626) Heterogeneous nuclear ribonucleoproteins A2/B1 (hnRNP A2 /| hnRNP B1) Length = 353 Score = 30.8 bits (68), Expect = 0.81 Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 1/61 (1%) Frame = -1 Query: 371 SSRGSYGEAHRGYASGRYE-SFGERPDYPEFHGGGQGRDLGFEHRGQYPGGRAYNSGGRR 195 S RG +G+ + GY G +FG P Y GG G G+ ++G GG N GG Sbjct: 236 SGRG-FGDGYNGYGGGPGGGNFGGSPGYGGGRGGYGGGGPGYGNQGGGYGGGYDNYGGGN 294 Query: 194 F 192 + Sbjct: 295 Y 295 Score = 28.1 bits (61), Expect = 5.3 Identities = 20/68 (29%), Positives = 25/68 (36%), Gaps = 7/68 (10%) Frame = -1 Query: 383 PAAASSRGSYGEAHRGYA-----SGRYESFGERPDYPEFHGGGQGRDLGFEHR--GQYPG 225 P + G YG + Y SG Y FG P +G + + G G Y G Sbjct: 274 PGYGNQGGGYGGGYDNYGGGNYGSGNYNDFGNYNQQPSNYGPMKSGNFGGSRNMGGPYGG 333 Query: 224 GRAYNSGG 201 G Y GG Sbjct: 334 GN-YGPGG 340
>NOP3_YEAST (Q01560) Nucleolar protein 3 (Mitochondrial targeting suppressor 1| protein) (Nuclear polyadenylated RNA-binding protein 1) Length = 414 Score = 30.8 bits (68), Expect = 0.81 Identities = 22/57 (38%), Positives = 23/57 (40%) Frame = -1 Query: 368 SRGSYGEAHRGYASGRYESFGERPDYPEFHGGGQGRDLGFEHRGQYPGGRAYNSGGR 198 SRG YG + GY S R R Y GG D G RG Y G R G R Sbjct: 336 SRGGYGGSRGGYDSPRGGYDSPRGGYSRGGYGGPRNDYG-PPRGSYGGSRGGYDGPR 391
>ERF2_PICPI (P23637) Eukaryotic peptide chain release factor GTP-binding| subunit (ERF2) (Translation release factor 3) (Polypeptide release factor 3) (ERF3) (ERF-3) (Omnipotent suppressor protein 2) Length = 741 Score = 30.8 bits (68), Expect = 0.81 Identities = 15/56 (26%), Positives = 23/56 (41%) Frame = -1 Query: 362 GSYGEAHRGYASGRYESFGERPDYPEFHGGGQGRDLGFEHRGQYPGGRAYNSGGRR 195 G YG+ + Y G Y ++ R Y GG +RG Y +YN+ + Sbjct: 62 GQYGQQQQNYNQGGYNNYNNRGGYSNNRGGYNN-----SNRGGYSNYNSYNTNSNQ 112
>ROA2_MOUSE (O88569) Heterogeneous nuclear ribonucleoproteins A2/B1 (hnRNP A2 /| hnRNP B1) Length = 341 Score = 30.8 bits (68), Expect = 0.81 Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 1/61 (1%) Frame = -1 Query: 371 SSRGSYGEAHRGYASGRYE-SFGERPDYPEFHGGGQGRDLGFEHRGQYPGGRAYNSGGRR 195 S RG +G+ + GY G +FG P Y GG G G+ ++G GG N GG Sbjct: 224 SGRG-FGDGYNGYGGGPGGGNFGGSPGYGGGRGGYGGGGPGYGNQGGGYGGGYDNYGGGN 282 Query: 194 F 192 + Sbjct: 283 Y 283 Score = 27.7 bits (60), Expect = 6.9 Identities = 20/68 (29%), Positives = 25/68 (36%), Gaps = 7/68 (10%) Frame = -1 Query: 383 PAAASSRGSYGEAHRGYA-----SGRYESFGERPDYPEFHGGGQGRDLGFEHR--GQYPG 225 P + G YG + Y SG Y FG P +G + + G G Y G Sbjct: 262 PGYGNQGGGYGGGYDNYGGGNYGSGTYNDFGNYNQQPSNYGPMKSGNFGGSRNMGGPYGG 321 Query: 224 GRAYNSGG 201 G Y GG Sbjct: 322 GN-YGPGG 328
>DHX9_HUMAN (Q08211) ATP-dependent RNA helicase A (EC 3.6.1.-) (Nuclear DNA| helicase II) (NDH II) (DEAH box protein 9) Length = 1270 Score = 30.8 bits (68), Expect = 0.81 Identities = 23/56 (41%), Positives = 26/56 (46%) Frame = -1 Query: 368 SRGSYGEAHRGYASGRYESFGERPDYPEFHGGGQGRDLGFEHRGQYPGGRAYNSGG 201 S G YG GY+SG Y S G F G G +G +RG GG NSGG Sbjct: 1181 SGGGYGG---GYSSGGYGSGGYGGSANSFRAG-YGAGVGGGYRGVSRGGFRGNSGG 1232
>ARS2_CAEEL (Q966L5) Arsenite-resistance protein 2 homolog| Length = 712 Score = 30.8 bits (68), Expect = 0.81 Identities = 25/78 (32%), Positives = 33/78 (42%), Gaps = 9/78 (11%) Frame = -1 Query: 398 ADTPPPAAASSRGSYGEAHRGYASGRYESFGERPDYPEFHGGGQGRDL----GFEHRGQY 231 AD P + + + HRG G +G D GGG GR+ G++ R Q+ Sbjct: 617 ADAQRPVDCEPKQAPRDDHRGGGGGERGGYGRERDDDRGPGGG-GRNSFGGGGYDRRPQF 675 Query: 230 P-----GGRAYNSGGRRF 192 P GGR GGR F Sbjct: 676 PPRHSLGGR--GGGGRYF 691
>K2C1_HUMAN (P04264) Keratin, type II cytoskeletal 1 (Cytokeratin-1) (CK-1)| (Keratin-1) (K1) (67 kDa cytokeratin) (Hair alpha protein) Length = 643 Score = 30.4 bits (67), Expect = 1.1 Identities = 23/62 (37%), Positives = 24/62 (38%), Gaps = 5/62 (8%) Frame = -1 Query: 371 SSRGSYGEAHRGYASGRYESFGERPDYPEFHGGG-----QGRDLGFEHRGQYPGGRAYNS 207 S GSYG G G Y S Y GGG GR G G GGR +S Sbjct: 560 SGGGSYGSGGGGGGHGSYGSGSSSGGYRGGSGGGGGGSSGGRGSGGGSSGGSIGGRGSSS 619 Query: 206 GG 201 GG Sbjct: 620 GG 621 Score = 28.5 bits (62), Expect = 4.0 Identities = 22/58 (37%), Positives = 23/58 (39%), Gaps = 1/58 (1%) Frame = -1 Query: 371 SSRGSYGEAHRGYASGRYESFGERPDYPEFHGGGQGRDLGFEHRGQY-PGGRAYNSGG 201 S GS G GY SG Y GGG G RG Y GG +Y SGG Sbjct: 512 SGGGSRGGGGGGYGSGGSSYGSGGGSYGSGGGGGGG-------RGSYGSGGSSYGSGG 562
>RO31_XENLA (P51968) Heterogeneous nuclear ribonucleoprotein A3 homolog 1| (hnRNP A3(A)) Length = 373 Score = 30.0 bits (66), Expect = 1.4 Identities = 24/76 (31%), Positives = 28/76 (36%), Gaps = 15/76 (19%) Frame = -1 Query: 383 PAAASSRGSYGEAHRGY---------ASGRYESFG-----ERPDYPEFHGGG-QGRDLGF 249 P + G YG GY G Y FG ++ +Y GG GR G Sbjct: 287 PGYGNQGGGYGGGGGGYDGYNESGNFGGGNYNDFGNYGGQQQSNYGPMKGGSFSGRSSGG 346 Query: 248 EHRGQYPGGRAYNSGG 201 G Y GG Y SGG Sbjct: 347 SGSGPYGGG--YGSGG 360 Score = 29.6 bits (65), Expect = 1.8 Identities = 19/51 (37%), Positives = 22/51 (43%), Gaps = 2/51 (3%) Frame = -1 Query: 347 AHRGYASGRYESFGERPDYPEFHGG--GQGRDLGFEHRGQYPGGRAYNSGG 201 A RG G G +Y GG G+G GF +RG Y GG GG Sbjct: 204 AQRGRGGGGSNFMGRGGNYGGGDGGNFGRGGGGGFGNRGGYGGGGGRGGGG 254
>UCRI_BOVIN (P13272) Ubiquinol-cytochrome c reductase iron-sulfur subunit,| mitochondrial precursor (EC 1.10.2.2) (Rieske iron-sulfur protein) (RISP) [Contains: Ubiquinol-cytochrome c reductase 8 kDa protein (Complex III subunit IX)] Length = 274 Score = 30.0 bits (66), Expect = 1.4 Identities = 26/86 (30%), Positives = 39/86 (45%), Gaps = 16/86 (18%) Frame = +3 Query: 72 LHSKAAGTKLLKKFTLNFPRKDKPS*SEAKMADC----------STKPSSESTSAR---- 209 L +AAG L+ +LN P + S ++ K+ D STK S ES+ AR Sbjct: 55 LRGQAAGRPLVASVSLNVPASVRYSHTDIKVPDFSDYRRPEVLDSTKSSKESSEARKGFS 114 Query: 210 --VISTTSRVLATVLKTKISTLAPTM 281 V +TT+ +A K +S +M Sbjct: 115 YLVTATTTVGVAYAAKNVVSQFVSSM 140
>ILF3_MOUSE (Q9Z1X4) Interleukin enhancer-binding factor 3| Length = 898 Score = 30.0 bits (66), Expect = 1.4 Identities = 21/66 (31%), Positives = 25/66 (37%), Gaps = 10/66 (15%) Frame = -1 Query: 374 ASSRGSYGEAHRGYASGRYESFGERPDYPEFH----------GGGQGRDLGFEHRGQYPG 225 A+ G Y A GY S Y S Y +F+ GGG G G Y Sbjct: 660 ANHGGGYMNAGAGYGSYGYSSNSATAGYSQFYSNGGHSGNAGGGGSGGGGGSSSYSSYYQ 719 Query: 224 GRAYNS 207 G +YNS Sbjct: 720 GDSYNS 725 Score = 29.6 bits (65), Expect = 1.8 Identities = 21/72 (29%), Positives = 29/72 (40%), Gaps = 11/72 (15%) Frame = -1 Query: 383 PAAASSRGSYG-----EAHRGYASGRYESFGERPDYPEFHGGGQGRDLGFEHRGQY---- 231 P S SYG + G+ G Y S+ + P GGG G D ++ + Y Sbjct: 759 PYNQSQYSSYGTPQGKQKGYGHGQGSYSSYSNSYNSP---GGGGGSDYSYDSKFNYSGSG 815 Query: 230 --PGGRAYNSGG 201 GG +Y S G Sbjct: 816 GRSGGNSYGSSG 827
>ILF3_RAT (Q9JIL3) Interleukin enhancer-binding factor 3| Length = 897 Score = 30.0 bits (66), Expect = 1.4 Identities = 21/75 (28%), Positives = 30/75 (40%), Gaps = 11/75 (14%) Frame = -1 Query: 383 PAAASSRGSYG-----EAHRGYASGRYESFGERPDYPEFHGGGQGRDLGFEHRGQY---- 231 P S SYG + G+ G Y S+ + P GGG G D ++ + Y Sbjct: 759 PYNQSQYSSYGTPQGKQKGYGHGQGSYSSYSNSYNSP---GGGGGSDYSYDSKFNYSGSG 815 Query: 230 --PGGRAYNSGGRRF 192 GG +Y S G + Sbjct: 816 GRSGGNSYGSSGSSY 830 Score = 30.0 bits (66), Expect = 1.4 Identities = 17/57 (29%), Positives = 23/57 (40%) Frame = -1 Query: 377 AASSRGSYGEAHRGYASGRYESFGERPDYPEFHGGGQGRDLGFEHRGQYPGGRAYNS 207 A + GSYG + +G + + Y GGG G G Y G +YNS Sbjct: 669 AGAGYGSYGYSSNSATAGYSQFYSNGGHYGNAGGGGSGGGGGSSSYSSYYQGDSYNS 725
>K1C10_MOUSE (P02535) Keratin, type I cytoskeletal 10 (Cytokeratin-10) (CK-10)| (Keratin-10) (K10) (56 kDa cytokeratin) (Keratin, type I cytoskeletal 59 kDa) Length = 569 Score = 30.0 bits (66), Expect = 1.4 Identities = 21/62 (33%), Positives = 25/62 (40%), Gaps = 6/62 (9%) Frame = -1 Query: 368 SRGSYGEAHRGYASGRYESFGERPDY------PEFHGGGQGRDLGFEHRGQYPGGRAYNS 207 SRGS G G +SG Y FG + F GG G G + G GG + Sbjct: 49 SRGSSGGGCFGGSSGGYGGFGGGGSFGGGYGGSSFGGGYGGSSFGGGYGGSSFGGAGFGG 108 Query: 206 GG 201 GG Sbjct: 109 GG 110
>AGA1_YEAST (P32323) A-agglutinin attachment subunit precursor| Length = 725 Score = 30.0 bits (66), Expect = 1.4 Identities = 20/68 (29%), Positives = 32/68 (47%) Frame = +3 Query: 78 SKAAGTKLLKKFTLNFPRKDKPS*SEAKMADCSTKPSSESTSARVISTTSRVLATVLKTK 257 S + T T + PS + + ST PSS+STSA ST+S +T Sbjct: 242 SSSTSTSQSSTSTSSSSTSTSPSSTSTSSSSTSTSPSSKSTSASSTSTSS--YSTSTSPS 299 Query: 258 ISTLAPTM 281 +++ +PT+ Sbjct: 300 LTSSSPTL 307
>AMPL3_ARATH (Q944P7) Leucine aminopeptidase 3, chloroplast precursor (EC| 3.4.11.1) (LAP 3) (Leucyl aminopeptidase 3) (Proline aminopeptidase 3) (EC 3.4.11.5) (Prolyl aminopeptidase 3) Length = 583 Score = 29.6 bits (65), Expect = 1.8 Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 2/72 (2%) Frame = -2 Query: 325 VGMNPLGSGQITQSSM--VGAKVEILVLSTVANTLEVVLITLADVDSEDGLVEQSAILAS 152 VG+ LG T S+ +G V ++ A+++ VVL + V +E L SAI + Sbjct: 158 VGLIGLGKSASTPSAFQSLGEAVAAAAKASQASSVAVVLASSESVSNESKLCSASAIASG 217 Query: 151 LQLGLSFRGKFK 116 LGL ++K Sbjct: 218 TVLGLFEDSRYK 229
>FUS_BOVIN (Q28009) RNA-binding protein FUS (Pigpen protein)| Length = 512 Score = 29.3 bits (64), Expect = 2.4 Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 11/68 (16%) Frame = -1 Query: 380 AAASSRGSYGE--AHRGYA--------SGRYESFGERPDYPEFHGGGQGRDLGFEHRGQ- 234 ++ SS+ SYG+ ++ GY SG Y S + Y + GGG G+ G+ + Q Sbjct: 83 SSQSSQSSYGQQSSYPGYGQQPAPSSTSGSYGSSSQSSGYGQPQGGGYGQQSGYGGQQQS 142 Query: 233 YPGGRAYN 210 Y ++YN Sbjct: 143 YGQQQSYN 150
>NOLA1_CAEBR (Q61B10) Putative H/ACA ribonucleoprotein complex subunit 1-like| protein Length = 246 Score = 29.3 bits (64), Expect = 2.4 Identities = 21/56 (37%), Positives = 25/56 (44%) Frame = -1 Query: 365 RGSYGEAHRGYASGRYESFGERPDYPEFHGGGQGRDLGFEHRGQYPGGRAYNSGGR 198 RG G+ RG GR G F GG +G G RG + GGR + GGR Sbjct: 166 RGRGGDRGRGGDRGRGGFGGRGGGGGGFRGGSRG-GFGGGDRGGFRGGRGGDFGGR 220
>FBRL_ASHGO (Q756P0) Fibrillarin| Length = 326 Score = 29.3 bits (64), Expect = 2.4 Identities = 21/62 (33%), Positives = 24/62 (38%) Frame = -1 Query: 383 PAAASSRGSYGEAHRGYASGRYESFGERPDYPEFHGGGQGRDLGFEHRGQYPGGRAYNSG 204 P + RG RG A G FG R GG +G GF+ RG GG G Sbjct: 5 PGSRGGRGGARGGARGGARGGRGGFGGR-------GGSRGGRGGFDSRGGARGGFGGRGG 57 Query: 203 GR 198 R Sbjct: 58 SR 59
>ROC2_ARATH (Q43349) 29 kDa ribonucleoprotein, chloroplast precursor| (RNA-binding protein cp29) Length = 342 Score = 29.3 bits (64), Expect = 2.4 Identities = 19/58 (32%), Positives = 22/58 (37%), Gaps = 2/58 (3%) Frame = -1 Query: 389 PPPAAASSRGSYGEAHRGYASGRYESFGER--PDYPEFHGGGQGRDLGFEHRGQYPGG 222 PPP S G GY S R +G Y GGG G + G + Q GG Sbjct: 176 PPPPKREESFSRGPRSGGYGSERGGGYGSERGGGYGSERGGGYGSERGGGYGSQRSGG 233
>MDTB_SHIFL (P69340) Multidrug resistance protein mdtB (Multidrug transporter| mdtB) Length = 1039 Score = 29.3 bits (64), Expect = 2.4 Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 7/55 (12%) Frame = +3 Query: 186 SSESTSARVISTTSRVLATV-------LKTKISTLAPTMELWVIWPLPKGFIPTR 329 +SE R+I+ R LA V L +STL ++ LWV +PKGF P + Sbjct: 513 ASEKMFDRIIAAYGRGLAKVLNHPWLTLSVALSTLLLSVLLWVF--IPKGFFPVQ 565
>RBP56_HUMAN (Q92804) TATA-binding protein-associated factor 2N (RNA-binding| protein 56) (TAFII68) (TAF(II)68) Length = 592 Score = 29.3 bits (64), Expect = 2.4 Identities = 20/53 (37%), Positives = 22/53 (41%) Frame = -1 Query: 362 GSYGEAHRGYASGRYESFGERPDYPEFHGGGQGRDLGFEHRGQYPGGRAYNSG 204 G YG GY R G+R Y GG +G G RG Y G R SG Sbjct: 492 GGYGGDRGGYGGDRGGYGGDRGGY----GGDRGGYGGDRSRGGYGGDRGGGSG 540
>ADCY8_RAT (P40146) Adenylate cyclase type 8 (EC 4.6.1.1) (Adenylate cyclase| type VIII) (ATP pyrophosphate-lyase 8) (Ca(2+)/calmodulin-activated adenylyl cyclase) Length = 1248 Score = 29.3 bits (64), Expect = 2.4 Identities = 22/77 (28%), Positives = 28/77 (36%) Frame = -1 Query: 359 SYGEAHRGYASGRYESFGERPDYPEFHGGGQGRDLGFEHRGQYPGGRAYNSGGRRF*RWL 180 S G R + +G + F ER G G G DLGF H P + G Sbjct: 90 SLGSGERAHNTGGTKVFPERSGSGSASGSGGGGDLGFLHLDCAPSNSDFFLNG------- 142 Query: 179 G*TVSHFGLTSAGLIFP 129 G + G+IFP Sbjct: 143 -------GYSYRGVIFP 152
>MDTB_ECOLI (P76398) Multidrug resistance protein mdtB (Multidrug transporter| mdtB) Length = 1040 Score = 29.3 bits (64), Expect = 2.4 Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 7/55 (12%) Frame = +3 Query: 186 SSESTSARVISTTSRVLATV-------LKTKISTLAPTMELWVIWPLPKGFIPTR 329 +SE R+I+ R LA V L +STL ++ LWV +PKGF P + Sbjct: 513 ASEKMFDRIIAAYGRGLAKVLNHPWLTLSVALSTLLLSVLLWVF--IPKGFFPVQ 565
>MDTB_ECOL6 (Q8FG04) Multidrug resistance protein mdtB (Multidrug transporter| mdtB) Length = 1040 Score = 29.3 bits (64), Expect = 2.4 Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 7/55 (12%) Frame = +3 Query: 186 SSESTSARVISTTSRVLATV-------LKTKISTLAPTMELWVIWPLPKGFIPTR 329 +SE R+I+ R LA V L +STL ++ LWV +PKGF P + Sbjct: 513 ASEKMFDRIIAAYGRGLAKVLNHPWLTLSVALSTLLLSVLLWVF--IPKGFFPVQ 565
>MDTB_ECO57 (Q8X7J4) Multidrug resistance protein mdtB (Multidrug transporter| mdtB) Length = 1040 Score = 29.3 bits (64), Expect = 2.4 Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 7/55 (12%) Frame = +3 Query: 186 SSESTSARVISTTSRVLATV-------LKTKISTLAPTMELWVIWPLPKGFIPTR 329 +SE R+I+ R LA V L +STL ++ LWV +PKGF P + Sbjct: 513 ASEKMFDRIIAAYGRGLAKVLNHPWLTLSVALSTLLLSVLLWVF--IPKGFFPVQ 565
>GRP2_SINAL (P49311) Glycine-rich RNA-binding protein GRP2A| Length = 169 Score = 28.9 bits (63), Expect = 3.1 Identities = 19/54 (35%), Positives = 21/54 (38%) Frame = -1 Query: 362 GSYGEAHRGYASGRYESFGERPDYPEFHGGGQGRDLGFEHRGQYPGGRAYNSGG 201 G YG GY GR E G + GGG G G Y GG + GG Sbjct: 106 GGYGGGGGGYGGGRREGGG-------YSGGGGGYSSRGGGGGGYGGGGRRDGGG 152 Score = 27.3 bits (59), Expect = 9.0 Identities = 13/28 (46%), Positives = 15/28 (53%) Frame = -1 Query: 278 GGGQGRDLGFEHRGQYPGGRAYNSGGRR 195 GGG+G G+ G Y GG GGRR Sbjct: 93 GGGRGGGGGYRGGGGYGGGGGGYGGGRR 120
>ELN_RAT (Q99372) Elastin precursor (Tropoelastin)| Length = 870 Score = 28.9 bits (63), Expect = 3.1 Identities = 23/60 (38%), Positives = 24/60 (40%) Frame = -1 Query: 383 PAAASSRGSYGEAHRGYASGRYESFGERPDYPEFHGGGQGRDLGFEHRGQYPGGRAYNSG 204 PAAA+ YG A G G RP F GGG GF YPGG A G Sbjct: 788 PAAAAKAAKYGAAGLGGV------LGARP----FPGGGVAARPGFGLSPIYPGGGAGGLG 837
>GLH2_CAEEL (Q966L9) ATP-dependent RNA helicase glh-2 (EC 3.6.1.-) (Germline| helicase 2) Length = 974 Score = 28.9 bits (63), Expect = 3.1 Identities = 17/60 (28%), Positives = 24/60 (40%) Frame = -1 Query: 380 AAASSRGSYGEAHRGYASGRYESFGERPDYPEFHGGGQGRDLGFEHRGQYPGGRAYNSGG 201 A + G + G+ SG FG ++ GGG+ G G GG + SGG Sbjct: 183 AGGTGFGGNSNSGSGFGSGLTNGFGSGNNHESGFGGGKSGGFG----GGNSGGSGFGSGG 238
>ROA3_RAT (Q6URK4) Heterogeneous nuclear ribonucleoprotein A3 (hnRNP A3)| Length = 379 Score = 28.9 bits (63), Expect = 3.1 Identities = 26/79 (32%), Positives = 34/79 (43%), Gaps = 2/79 (2%) Frame = -1 Query: 371 SSRGSYGEAHRGYASGRYESFGERPDYPEFHGGGQGRDLGFEHRGQYPGGRAYNSGG--R 198 SSRG YG GY + + G + GGG G D G+ G + GG Y GG Sbjct: 284 SSRGGYGGGGPGYGN---QGGG-------YGGGGGGYD-GYNEGGNFGGGN-YGGGGNYN 331 Query: 197 RF*RWLG*TVSHFGLTSAG 141 F + G S++G G Sbjct: 332 DFGNYSGQQQSNYGPMKGG 350
>ROA3_MOUSE (Q8BG05) Heterogeneous nuclear ribonucleoprotein A3 (hnRNP A3)| Length = 379 Score = 28.9 bits (63), Expect = 3.1 Identities = 26/79 (32%), Positives = 34/79 (43%), Gaps = 2/79 (2%) Frame = -1 Query: 371 SSRGSYGEAHRGYASGRYESFGERPDYPEFHGGGQGRDLGFEHRGQYPGGRAYNSGG--R 198 SSRG YG GY + + G + GGG G D G+ G + GG Y GG Sbjct: 284 SSRGGYGGGGPGYGN---QGGG-------YGGGGGGYD-GYNEGGNFGGGN-YGGGGNYN 331 Query: 197 RF*RWLG*TVSHFGLTSAG 141 F + G S++G G Sbjct: 332 DFGNYSGQQQSNYGPMKGG 350
>ZN326_CHICK (Q5ZJ02) Zinc finger protein 326| Length = 565 Score = 28.9 bits (63), Expect = 3.1 Identities = 16/55 (29%), Positives = 22/55 (40%) Frame = -1 Query: 389 PPPAAASSRGSYGEAHRGYASGRYESFGERPDYPEFHGGGQGRDLGFEHRGQYPG 225 P P + RG+ G+ S Y++FG G GR G H G + G Sbjct: 170 PAPVGSRGRGTPAYPESGFGSRNYDAFG---------GPSTGRGRGRGHMGDFGG 215
>FA98A_PONPY (Q5R679) Protein FAM98A| Length = 518 Score = 28.9 bits (63), Expect = 3.1 Identities = 20/62 (32%), Positives = 26/62 (41%), Gaps = 6/62 (9%) Frame = -1 Query: 362 GSYGEAHRGYAS-GRYESFGERPDYPEFHGGGQGRDLGFEHRGQYP-----GGRAYNSGG 201 G G H Y G +E G R + GG+G G +H+G + GG Y GG Sbjct: 339 GRGGYEHSSYGGRGGHEQGGGRGGRGGYDHGGRGGGRGNKHQGGWTDGGSGGGGGYQDGG 398 Query: 200 RR 195 R Sbjct: 399 YR 400
>FA98A_HUMAN (Q8NCA5) Protein FAM98A| Length = 519 Score = 28.9 bits (63), Expect = 3.1 Identities = 20/62 (32%), Positives = 26/62 (41%), Gaps = 6/62 (9%) Frame = -1 Query: 362 GSYGEAHRGYAS-GRYESFGERPDYPEFHGGGQGRDLGFEHRGQYP-----GGRAYNSGG 201 G G H Y G +E G R + GG+G G +H+G + GG Y GG Sbjct: 340 GRGGYEHSSYGGRGGHEQGGGRGGRGGYDHGGRGGGRGNKHQGGWTDGGSGGGGGYQDGG 399 Query: 200 RR 195 R Sbjct: 400 YR 401
>RB87F_DROME (P48810) Heterogeneous nuclear ribonucleoprotein 87F (HRP36.1| protein) (Protein P11) Length = 385 Score = 28.9 bits (63), Expect = 3.1 Identities = 21/58 (36%), Positives = 27/58 (46%), Gaps = 4/58 (6%) Frame = -1 Query: 362 GSYG-EAHRGYASG--RYESFGERPDYPEFHGGGQGR-DLGFEHRGQYPGGRAYNSGG 201 G +G E + Y G R +FG P GGG G + G + GQ G YN+GG Sbjct: 314 GGFGNEYQQSYGGGPQRNSNFGNNRPAPYSQGGGGGGFNKGNQGGGQGFAGNNYNTGG 371
>VG38_BPOX2 (P08233) Receptor recognizing protein (Protein Gp38)| Length = 266 Score = 28.9 bits (63), Expect = 3.1 Identities = 18/58 (31%), Positives = 25/58 (43%) Frame = -1 Query: 377 AASSRGSYGEAHRGYASGRYESFGERPDYPEFHGGGQGRDLGFEHRGQYPGGRAYNSG 204 AA G G A+R ++ +++ G GG GR G G+Y GG A G Sbjct: 156 AAGGGGGGGIAYRPHSGAKWQDIG----------GGGGRPFGGAGGGRYSGGAASYEG 203
>ELN_MOUSE (P54320) Elastin precursor (Tropoelastin)| Length = 860 Score = 28.9 bits (63), Expect = 3.1 Identities = 23/60 (38%), Positives = 24/60 (40%) Frame = -1 Query: 383 PAAASSRGSYGEAHRGYASGRYESFGERPDYPEFHGGGQGRDLGFEHRGQYPGGRAYNSG 204 PAAA+ YG A G G RP F GGG GF YPGG A G Sbjct: 778 PAAAAKAAKYGAAGLGGV------LGARP----FPGGGVAARPGFGLSPIYPGGGAGGLG 827
>ADCY8_MOUSE (P97490) Adenylate cyclase type 8 (EC 4.6.1.1) (Adenylate cyclase| type VIII) (ATP pyrophosphate-lyase 8) (Ca(2+)/calmodulin-activated adenylyl cyclase) Length = 1249 Score = 28.9 bits (63), Expect = 3.1 Identities = 22/77 (28%), Positives = 28/77 (36%) Frame = -1 Query: 359 SYGEAHRGYASGRYESFGERPDYPEFHGGGQGRDLGFEHRGQYPGGRAYNSGGRRF*RWL 180 S G R + +G + F ER G G G DLGF H P + G Sbjct: 91 SLGPGERAHNTGGTKVFPERSGSGSASGSGGGGDLGFLHLDCAPSNSDFFLNG------- 143 Query: 179 G*TVSHFGLTSAGLIFP 129 G + G+IFP Sbjct: 144 -------GYSYRGVIFP 153
>PP1RA_PIG (Q767K9) Serine/threonine-protein phosphatase 1 regulatory subunit 10| (MHC class I region proline-rich protein CAT53) (Protein FB19) Length = 925 Score = 28.9 bits (63), Expect = 3.1 Identities = 22/76 (28%), Positives = 24/76 (31%), Gaps = 13/76 (17%) Frame = -1 Query: 383 PAAASSRGSYGEAHRGYASGRYESFGERPDYPEFHGGGQGR-------DLGFEHRGQYP- 228 P GS H G G G RP HGG G G +HRG P Sbjct: 804 PGGGMGGGSGHRPHEGPGGGMGAGGGHRPHEGPGHGGPHGHRPHDVPGHRGHDHRGPPPH 863 Query: 227 -----GGRAYNSGGRR 195 G + GG R Sbjct: 864 EHRGHDGPGHGGGGHR 879
>RX21_DROME (Q24491) RNA-binding protein Rsf1 (RNA-binding protein Rox21)| Length = 197 Score = 28.9 bits (63), Expect = 3.1 Identities = 21/59 (35%), Positives = 26/59 (44%), Gaps = 3/59 (5%) Frame = -1 Query: 371 SSRGSYGEAHRGYASGRYESFGERPDYPEFHGGGQGRDLGFEHRGQYPGGR---AYNSG 204 SS S RGY+SGR + + G +G GF R Y GGR Y+SG Sbjct: 120 SSGSSSRHTERGYSSGRSGASS--------YNGREGGGSGFNRREVYGGGRDSSRYSSG 170
>YM38_YEAST (Q03825) Hypothetical 85.0 kDa protein in HLJ1-SMP2 intergenic| region Length = 758 Score = 28.5 bits (62), Expect = 4.0 Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 1/50 (2%) Frame = +2 Query: 242 GAQNQDLDLGPHHGTLGNLAAPQRIHTDQMHNPD-EPLHKNLETKQQQEE 388 G Q ++L H L + A PQ+ Q+ P +P H+ + +QQQ++ Sbjct: 253 GQQYATINLHKHFNDLQSPAQPQQSSQQQIQQPQHQPQHQPQQQQQQQQQ 302
>ION3_CARAU (P18520) Intermediate filament protein ON3| Length = 520 Score = 28.5 bits (62), Expect = 4.0 Identities = 17/52 (32%), Positives = 22/52 (42%) Frame = -1 Query: 359 SYGEAHRGYASGRYESFGERPDYPEFHGGGQGRDLGFEHRGQYPGGRAYNSG 204 SYG AS Y ++ Y +GGG G+ G Y G Y+SG Sbjct: 435 SYGSYPMESASSGYSNYSS--GYGGGYGGGYSSGGGYSSGGGYSSGGGYSSG 484
>MBP_RABIT (P25274) Myelin basic protein (MBP) (Myelin A1 protein) (Myelin P1| protein) Length = 168 Score = 28.5 bits (62), Expect = 4.0 Identities = 23/67 (34%), Positives = 27/67 (40%), Gaps = 4/67 (5%) Frame = -1 Query: 392 TPPPAAASSRGSYGEAHRGYASGRYESF---GERPDYPEFHGGGQGRDL-GFEHRGQYPG 225 TPPP+ RG+ A G+ F G DY H G +G D G R G Sbjct: 96 TPPPSQGKGRGTVLSRFSWGAEGQKPGFGYGGRAADYKSAHKGLKGADAQGTLSRLFKLG 155 Query: 224 GRAYNSG 204 GR SG Sbjct: 156 GRDSRSG 162
>HAND1_RABIT (P57100) Heart- and neural crest derivatives-expressed protein 1| (Extraembryonic tissues, heart, autonomic nervous system and neural crest derivatives-expressed protein 1) (eHAND) Length = 215 Score = 28.5 bits (62), Expect = 4.0 Identities = 14/31 (45%), Positives = 19/31 (61%), Gaps = 1/31 (3%) Frame = -1 Query: 389 PPPAAASSRGSYGEAHR-GYASGRYESFGER 300 PPP AA++ +YG R G + GR E+ G R Sbjct: 61 PPPTAAAAAATYGPDTRPGQSPGRLEALGGR 91
>FBRL_HUMAN (P22087) Fibrillarin (34 kDa nucleolar scleroderma antigen)| Length = 321 Score = 28.5 bits (62), Expect = 4.0 Identities = 20/53 (37%), Positives = 24/53 (45%), Gaps = 2/53 (3%) Frame = -1 Query: 353 GEAHRGYASGRYESFGERPDYPEF--HGGGQGRDLGFEHRGQYPGGRAYNSGG 201 G + RG G FG+R GGG+GR GF RG+ GG GG Sbjct: 4 GFSPRGGGFGGRGGFGDRGGRGGRGGFGGGRGRGGGFRGRGRGGGGGGGGGGG 56
>PGL1_CAEEL (Q9TZQ3) P granule abnormality protein 1| Length = 730 Score = 28.5 bits (62), Expect = 4.0 Identities = 21/54 (38%), Positives = 22/54 (40%) Frame = -1 Query: 365 RGSYGEAHRGYASGRYESFGERPDYPEFHGGGQGRDLGFEHRGQYPGGRAYNSG 204 RG YG RG G G R Y GG+G G RG Y GGR G Sbjct: 677 RGGYGGGDRGGRGGYGGDRGGRGGYGGGDRGGRGGYGGDRGRGGY-GGRGGRGG 729
>RO32_XENLA (P51992) Heterogeneous nuclear ribonucleoprotein A3 homolog 2| (hnRNP A3(B)) Length = 385 Score = 28.5 bits (62), Expect = 4.0 Identities = 19/51 (37%), Positives = 21/51 (41%), Gaps = 3/51 (5%) Frame = -1 Query: 347 AHRGYASGRYESFGERPDYPEFHGGGQG---RDLGFEHRGQYPGGRAYNSG 204 A RG G G +Y GGG G R GF +RG Y GG G Sbjct: 204 AQRGRGGGGSNFMGRGGNYGGGDGGGGGNFGRGGGFGNRGGYGGGGGRGGG 254
>FBRL_CAEEL (Q22053) Fibrillarin| Length = 352 Score = 28.5 bits (62), Expect = 4.0 Identities = 25/65 (38%), Positives = 29/65 (44%), Gaps = 9/65 (13%) Frame = -1 Query: 365 RGSYGEAHRG-YASGRYESFGERPDYPEFHGGGQ-----GRDL---GFEHRGQYPGGRAY 213 RGS+G RG + GR G+R + GGG GR GF RG GGR Sbjct: 43 RGSFGGGDRGGFRGGR--GGGDRGGFRGGRGGGDRGGFGGRGSPRGGFGGRGSPRGGRGS 100 Query: 212 NSGGR 198 GGR Sbjct: 101 PRGGR 105
>FBRL_GIALA (Q24957) Fibrillarin| Length = 327 Score = 28.5 bits (62), Expect = 4.0 Identities = 20/48 (41%), Positives = 25/48 (52%), Gaps = 1/48 (2%) Frame = -1 Query: 362 GSYGEAHRGYASGRYESFGER-PDYPEFHGGGQGRDLGFEHRGQYPGG 222 G G + SGR SFG+R P+ P+F G GR G + RG P G Sbjct: 17 GGRGPGNDRRDSGR--SFGDRRPERPDFKRGDGGRGFG-DRRGSGPPG 61
>EGG1_SCHJA (P19470) Eggshell protein 1 precursor| Length = 212 Score = 28.5 bits (62), Expect = 4.0 Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 1/55 (1%) Frame = -1 Query: 359 SYGEAHRGYASGRYESFGERPDYPEFHGGGQGRDLGFEH-RGQYPGGRAYNSGGR 198 SYG + G ++GR G+ GGG+G G + +G GG N GG+ Sbjct: 143 SYGNDYYGDSNGRKNGHGKGGKGGNGGGGGKGGGKGGGNGKGNGKGGGGKNGGGK 197
>NUCL_MESAU (P08199) Nucleolin (Protein C23)| Length = 713 Score = 28.1 bits (61), Expect = 5.3 Identities = 21/61 (34%), Positives = 25/61 (40%) Frame = -1 Query: 374 ASSRGSYGEAHRGYASGRYESFGERPDYPEFHGGGQGRDLGFEHRGQYPGGRAYNSGGRR 195 A +G G RG G + G GG+GR GF RG + GGR GG Sbjct: 644 AKPKGEGGFGGRGGGRGGFGGRGGGRGGGRGGFGGRGRG-GFGGRGGFRGGRGGGGGGGD 702 Query: 194 F 192 F Sbjct: 703 F 703
>HNRL1_HUMAN (Q9BUJ2) Heterogeneous nuclear ribonucleoprotein U-like protein 1| (Adenovirus early region 1B-associated protein 5) (E1B-55 kDa-associated protein 5) (E1B-AP5) Length = 856 Score = 28.1 bits (61), Expect = 5.3 Identities = 24/68 (35%), Positives = 27/68 (39%), Gaps = 2/68 (2%) Frame = -1 Query: 398 ADTPPPAAASSRGSYGEAHRGYASG--RYESFGERPDYPEFHGGGQGRDLGFEHRGQYPG 225 A PP +RG G RG G RYE+ G GG Q R G G Y G Sbjct: 601 AGPPPEKRFDNRGGGGFRGRGGGGGFQRYENRGPPGGN---RGGFQNRGGGSGGGGNYRG 657 Query: 224 GRAYNSGG 201 G + GG Sbjct: 658 GFNRSGGG 665
>GRP7_ARATH (Q03250) Glycine-rich RNA-binding protein 7| Length = 176 Score = 28.1 bits (61), Expect = 5.3 Identities = 25/75 (33%), Positives = 26/75 (34%), Gaps = 17/75 (22%) Frame = -1 Query: 374 ASSRGSYGEA-HRGYASGRYESFG----------------ERPDYPEFHGGGQGRDLGFE 246 A SRGS G HRG G Y S G R + GGG G Sbjct: 84 AQSRGSGGGGGHRGGGGGGYRSGGGGGYSGGGGSYGGGGGRREGGGGYSGGGGGYSSRGG 143 Query: 245 HRGQYPGGRAYNSGG 201 G Y GGR GG Sbjct: 144 GGGSYGGGRREGGGG 158
>THYD_CLAFS (Q9UVI4) Trihydrophobin precursor (CFTH1)| Length = 394 Score = 28.1 bits (61), Expect = 5.3 Identities = 16/54 (29%), Positives = 22/54 (40%) Frame = -1 Query: 362 GSYGEAHRGYASGRYESFGERPDYPEFHGGGQGRDLGFEHRGQYPGGRAYNSGG 201 G + G G + G DYP +GG G + G + G G N+GG Sbjct: 123 GGNNGGNGGNNGGNGGNNGGNTDYPGGNGGNNGGNNGGNNGGNNGGNNGGNNGG 176
>RPOB_MYCHJ (Q4A969) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (RNAP| beta subunit) (Transcriptase beta chain) (RNA polymerase beta subunit) Length = 1220 Score = 28.1 bits (61), Expect = 5.3 Identities = 16/43 (37%), Positives = 24/43 (55%) Frame = -2 Query: 220 VLITLADVDSEDGLVEQSAILASLQLGLSFRGKFKVNFFRSLV 92 V +TL V SEDG +E+ IL + ++ G F +N F +V Sbjct: 99 VYVTLVKVHSEDGEMEEQEILLAEFPFMTQGGTFIINGFEKVV 141
>RPOB_MYCH7 (Q4A7A9) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (RNAP| beta subunit) (Transcriptase beta chain) (RNA polymerase beta subunit) Length = 1220 Score = 28.1 bits (61), Expect = 5.3 Identities = 16/43 (37%), Positives = 24/43 (55%) Frame = -2 Query: 220 VLITLADVDSEDGLVEQSAILASLQLGLSFRGKFKVNFFRSLV 92 V +TL V SEDG +E+ IL + ++ G F +N F +V Sbjct: 99 VYVTLVKVHSEDGEMEEQEILLAEFPFMTQGGTFIINGFEKVV 141
>RPOB_MYCH2 (Q5ZZS1) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (RNAP| beta subunit) (Transcriptase beta chain) (RNA polymerase beta subunit) Length = 1220 Score = 28.1 bits (61), Expect = 5.3 Identities = 16/43 (37%), Positives = 24/43 (55%) Frame = -2 Query: 220 VLITLADVDSEDGLVEQSAILASLQLGLSFRGKFKVNFFRSLV 92 V +TL V SEDG +E+ IL + ++ G F +N F +V Sbjct: 99 VYVTLVKVHSEDGEMEEQEILLAEFPFMTQGGTFIINGFEKVV 141
>LORI_MOUSE (P18165) Loricrin| Length = 486 Score = 28.1 bits (61), Expect = 5.3 Identities = 18/58 (31%), Positives = 22/58 (37%) Frame = -1 Query: 374 ASSRGSYGEAHRGYASGRYESFGERPDYPEFHGGGQGRDLGFEHRGQYPGGRAYNSGG 201 +S GS G G G+Y G + GG G G G Y GG + GG Sbjct: 190 SSGGGSSGGCGGGSGGGKYSGGGGGSSCGGGYSGGGGSSGGSSCGGGYSGGGGSSCGG 247
>GRP1_HORVU (P17816) Glycine-rich cell wall structural protein precursor| Length = 200 Score = 28.1 bits (61), Expect = 5.3 Identities = 20/60 (33%), Positives = 22/60 (36%), Gaps = 6/60 (10%) Frame = -1 Query: 362 GSYG------EAHRGYASGRYESFGERPDYPEFHGGGQGRDLGFEHRGQYPGGRAYNSGG 201 G YG H G G Y G P + GGG G G+ G GG Y GG Sbjct: 80 GGYGGGGGGYPGHGGEGGGGYGGGGGYPGHGGEGGGGYGGGGGYHGHGG-EGGGGYGGGG 138
>KIN25_CAEEL (Q10925) Probable tyrosine-protein kinase kin-25 (EC 2.7.10.2)| Length = 1237 Score = 28.1 bits (61), Expect = 5.3 Identities = 12/31 (38%), Positives = 15/31 (48%) Frame = -1 Query: 293 YPEFHGGGQGRDLGFEHRGQYPGGRAYNSGG 201 YP + G Q G + YPG + YNS G Sbjct: 1059 YPNYGNGFQAYGYGMNYHQGYPGYQGYNSYG 1089
>K1C9_HUMAN (P35527) Keratin, type I cytoskeletal 9 (Cytokeratin-9) (CK-9)| (Keratin-9) (K9) Length = 623 Score = 28.1 bits (61), Expect = 5.3 Identities = 23/76 (30%), Positives = 25/76 (32%), Gaps = 20/76 (26%) Frame = -1 Query: 368 SRGSYGEAHRGYASGRYESFGERPDYPEFHG--------------------GGQGRDLGF 249 S GSYG RG + G Y G Y G GG G G Sbjct: 481 SGGSYGRGSRGGSGGSYGGGGSGGGYGGGSGSRGGSGGSYGGGSGSGGGSGGGYGGGSGG 540 Query: 248 EHRGQYPGGRAYNSGG 201 H G GG + SGG Sbjct: 541 GHSGGSGGGHSGGSGG 556
>VG50_ICHV1 (Q00130) Hypothetical gene 50 protein| Length = 670 Score = 27.7 bits (60), Expect = 6.9 Identities = 22/70 (31%), Positives = 29/70 (41%), Gaps = 4/70 (5%) Frame = -1 Query: 392 TPPPAAASSRGSYGEAHRGYASGRYESFGERP---DYPEFHGGGQGRDLGFEHRGQ-YPG 225 T PA A+ + A A+G + +P + HG G G G H G+ PG Sbjct: 601 TAKPAGANGTVTTTTAKPAGANGTVTTTTAKPAGAGHGHGHGHGHGHGHGHGHGGRGPPG 660 Query: 224 GRAYNSGGRR 195 G SG RR Sbjct: 661 GHKPKSGARR 670
>ENC_DROME (Q8MSX1) Protein encore| Length = 1818 Score = 27.7 bits (60), Expect = 6.9 Identities = 21/66 (31%), Positives = 25/66 (37%) Frame = -1 Query: 392 TPPPAAASSRGSYGEAHRGYASGRYESFGERPDYPEFHGGGQGRDLGFEHRGQYPGGRAY 213 TPP S GS A G SG Y S P Y + +G +E R G Sbjct: 1401 TPPAPNNGSSGS-SSAGGGGNSGGYHSNSSTPHYYQGQNSNEGYTSPYEKRNHGGGASGA 1459 Query: 212 NSGGRR 195 +S G R Sbjct: 1460 HSVGVR 1465
>GUX2_TRIRE (P07987) Exoglucanase 2 precursor (EC 3.2.1.91) (Exoglucanase II)| (Exocellobiohydrolase II) (CBHII) (1,4-beta-cellobiohydrolase) Length = 471 Score = 27.7 bits (60), Expect = 6.9 Identities = 16/50 (32%), Positives = 24/50 (48%) Frame = +3 Query: 165 ADCSTKPSSESTSARVISTTSRVLATVLKTKISTLAPTMELWVIWPLPKG 314 + C +S S+S R STTSRV T ++ +T P + P+ G Sbjct: 59 SQCLPGAASSSSSTRAASTTSRVSPTTSRSSSATPPPGSTTTRVPPVGSG 108
>TSGA2_MOUSE (Q8VIG3) Testis-specific gene A2 protein (Male meiotic metaphase| chromosome-associated acidic protein) (Meichroacidin) Length = 301 Score = 27.7 bits (60), Expect = 6.9 Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 1/46 (2%) Frame = -1 Query: 326 GRYESFGERPDYPEFHGGGQGR-DLGFEHRGQYPGGRAYNSGGRRF 192 G YE GER + E HG G+ R G + G Y G+ + G +F Sbjct: 18 GEYE--GERNEVGERHGHGKARLPNGDTYEGSYEFGKRHGQGTYKF 61
>TIM54_DEBHA (Q6BTN1) Mitochondrial import inner membrane translocase subunit| TIM54 Length = 495 Score = 27.7 bits (60), Expect = 6.9 Identities = 18/53 (33%), Positives = 24/53 (45%), Gaps = 6/53 (11%) Frame = +2 Query: 233 IGHGAQNQDLDLGPHHGTLGNLAAPQRIHT------DQMHNPDEPLHKNLETK 373 IG GA + + G H G LG L AP+ + T N E H + E+K Sbjct: 246 IGRGAYKEYMT-GVHEGLLGPLEAPEEVRTITEVDPQVTENEPETAHNDNESK 297
>DHX9_MOUSE (O70133) ATP-dependent RNA helicase A (EC 3.6.1.-) (Nuclear DNA| helicase II) (NDH II) (DEAH box protein 9) (mHEL-5) Length = 1380 Score = 27.7 bits (60), Expect = 6.9 Identities = 24/66 (36%), Positives = 26/66 (39%) Frame = -1 Query: 389 PPPAAASSRGSYGEAHRGYASGRYESFGERPDYPEFHGGGQGRDLGFEHRGQYPGGRAYN 210 PP A GS RGY G Y G Y G G GF G + GG +N Sbjct: 1162 PPKMARYDNGS--GYRRGYGGGGYGGGGYGGGY-----GSGGFGGGFGSGGGFGGG--FN 1212 Query: 209 SGGRRF 192 SGG F Sbjct: 1213 SGGGGF 1218
>RBM3_HUMAN (P98179) Putative RNA-binding protein 3 (RNA-binding motif protein| 3) (RNPL) Length = 157 Score = 27.7 bits (60), Expect = 6.9 Identities = 21/53 (39%), Positives = 25/53 (47%) Frame = -1 Query: 359 SYGEAHRGYASGRYESFGERPDYPEFHGGGQGRDLGFEHRGQYPGGRAYNSGG 201 S G +GY SGRY + RP +G G GR + R Q GG SGG Sbjct: 104 SRGGGDQGYGSGRY--YDSRPG---GYGYGYGRSRDYNGRNQ--GGYDRYSGG 149
>UL73_HCMVA (P16795) Structural glycoprotein UL73 (gpUL73)| Length = 138 Score = 27.7 bits (60), Expect = 6.9 Identities = 18/39 (46%), Positives = 25/39 (64%) Frame = +3 Query: 162 MADCSTKPSSESTSARVISTTSRVLATVLKTKISTLAPT 278 +A+ S SS STSA TTS+ A+V TK++T+A T Sbjct: 16 VAESSGNNSSTSTSA----TTSKSSASVSTTKLTTVATT 50
>CIRBP_RAT (P60825) Cold-inducible RNA-binding protein (Glycine-rich| RNA-binding protein CIRP) (A18 hnRNP) Length = 172 Score = 27.7 bits (60), Expect = 6.9 Identities = 23/63 (36%), Positives = 27/63 (42%), Gaps = 10/63 (15%) Frame = -1 Query: 368 SRG---SYGEAHRGYASGRYES----FGERPDY--PEFHGGGQG-RDLGFEHRGQYPGGR 219 SRG S G RGY GR+ES +G DY GG G R G +R Y Sbjct: 109 SRGRGFSRGGGDRGYGGGRFESRSGGYGGSRDYYASRSQGGSYGYRSSGGSYRDSYDSYA 168 Query: 218 AYN 210 +N Sbjct: 169 THN 171
>CIRBP_MOUSE (P60824) Cold-inducible RNA-binding protein (Glycine-rich| RNA-binding protein CIRP) (A18 hnRNP) Length = 172 Score = 27.7 bits (60), Expect = 6.9 Identities = 23/63 (36%), Positives = 27/63 (42%), Gaps = 10/63 (15%) Frame = -1 Query: 368 SRG---SYGEAHRGYASGRYES----FGERPDY--PEFHGGGQG-RDLGFEHRGQYPGGR 219 SRG S G RGY GR+ES +G DY GG G R G +R Y Sbjct: 109 SRGRGFSRGGGDRGYGGGRFESRSGGYGGSRDYYASRSQGGSYGYRSSGGSYRDSYDSYA 168 Query: 218 AYN 210 +N Sbjct: 169 THN 171
>CIRBP_CRIGR (P60826) Cold-inducible RNA-binding protein (Glycine-rich| RNA-binding protein CIRP) (A18 hnRNP) Length = 172 Score = 27.7 bits (60), Expect = 6.9 Identities = 23/63 (36%), Positives = 27/63 (42%), Gaps = 10/63 (15%) Frame = -1 Query: 368 SRG---SYGEAHRGYASGRYES----FGERPDY--PEFHGGGQG-RDLGFEHRGQYPGGR 219 SRG S G RGY GR+ES +G DY GG G R G +R Y Sbjct: 109 SRGRGFSRGGGDRGYGGGRFESRSGGYGGSRDYYASRSQGGSYGYRSSGGSYRDSYDSYA 168 Query: 218 AYN 210 +N Sbjct: 169 THN 171
>Y486_METJA (Q57910) Hypothetical protein MJ0486| Length = 322 Score = 27.7 bits (60), Expect = 6.9 Identities = 16/62 (25%), Positives = 27/62 (43%) Frame = -2 Query: 223 VVLITLADVDSEDGLVEQSAILASLQLGLSFRGKFKVNFFRSLVPAAFECKHL*NLFCDY 44 V+++ D+ D + + + A Q G+ + KFK F+ V C H N C + Sbjct: 3 VIMLNYDDIKIIDEIYSEGYLFA--QYGIYIKKKFKQKIFKIPVDIGLGCPHKKNGGCIF 60 Query: 43 VP 38 P Sbjct: 61 CP 62
>EGG2_SCHJA (P19469) Eggshell protein 2A precursor| Length = 207 Score = 27.7 bits (60), Expect = 6.9 Identities = 18/55 (32%), Positives = 25/55 (45%), Gaps = 1/55 (1%) Frame = -1 Query: 359 SYGEAHRGYASGRYESFGERPDYPEFHGGGQGRDLGFEH-RGQYPGGRAYNSGGR 198 SYG + G ++GR G+ GGG+G G + G GG N GG+ Sbjct: 138 SYGNDYYGGSNGRRNGHGKGGKGGNGGGGGKGGGKGGGNGEGNGKGGGGKNGGGK 192
>ILF3_HUMAN (Q12906) Interleukin enhancer-binding factor 3 (Nuclear factor of| activated T-cells 90 kDa) (NF-AT-90) (Double-stranded RNA-binding protein 76) (DRBP76) (Translational control protein 80) (TCP80) (Nuclear factor associated with dsRNA) (NFAR) ( Length = 894 Score = 27.7 bits (60), Expect = 6.9 Identities = 20/65 (30%), Positives = 24/65 (36%), Gaps = 10/65 (15%) Frame = -1 Query: 371 SSRGSYGEAHRGYASGRYESFGERPDYPEFH----------GGGQGRDLGFEHRGQYPGG 222 ++ G Y A GY S Y Y +F+ GGG G G G Y G Sbjct: 660 ANHGGYMNAGAGYGSYGYGGNSATAGYSQFYSNGGHSGNASGGGGGGGGGSSGYGSYYQG 719 Query: 221 RAYNS 207 YNS Sbjct: 720 DNYNS 724 Score = 27.3 bits (59), Expect = 9.0 Identities = 20/71 (28%), Positives = 27/71 (38%), Gaps = 6/71 (8%) Frame = -1 Query: 386 PPAAASSRGSYGEAHRGYASGRYESFGERPDYPEFHGGGQGRDLGFEHRGQY------PG 225 PP ++G+ Y S Y S GGG G D +E + Y G Sbjct: 769 PPQGKQKGYNHGQGSYSY-SNSYNS----------PGGGGGSDYNYESKFNYSGSGGRSG 817 Query: 224 GRAYNSGGRRF 192 G +Y SGG + Sbjct: 818 GNSYGSGGASY 828
>MAST3_HUMAN (O60307) Microtubule-associated serine/threonine-protein kinase 3 (EC| 2.7.11.1) Length = 1309 Score = 27.7 bits (60), Expect = 6.9 Identities = 26/76 (34%), Positives = 29/76 (38%), Gaps = 12/76 (15%) Frame = -1 Query: 389 PPPAAAS-----SRGSYGEAHRGYASGRYESFGERPDYPEFHGGGQGRDLG-------FE 246 PPPAA S S A +A R S G R P G+GR LG + Sbjct: 817 PPPAATPVMPKPSSLSADTAALSHARLRSNSIGARHSTPRPLDAGRGRRLGGPRDPAPEK 876 Query: 245 HRGQYPGGRAYNSGGR 198 R GG SGGR Sbjct: 877 SRASSSGGSGGGSGGR 892
>CRH1_YEAST (P53301) Probable glycosidase CRH1 precursor (EC 3.2.-.-) (Congo| red hypersensitive protein 1) Length = 507 Score = 27.7 bits (60), Expect = 6.9 Identities = 19/44 (43%), Positives = 27/44 (61%), Gaps = 2/44 (4%) Frame = +3 Query: 159 KMADCSTKPS--SESTSARVISTTSRVLATVLKTKISTLAPTME 284 K + S+K + S STS +IS+T + ATV T ST+APT + Sbjct: 385 KQSSSSSKKTVASSSTSESIISST-KTPATVSSTTRSTVAPTTQ 427
>GRP9_DAUCA (P37703) Glycine-rich protein DC9.1| Length = 144 Score = 27.3 bits (59), Expect = 9.0 Identities = 18/56 (32%), Positives = 24/56 (42%), Gaps = 2/56 (3%) Frame = -1 Query: 362 GSYGEAHRGY--ASGRYESFGERPDYPEFHGGGQGRDLGFEHRGQYPGGRAYNSGG 201 G Y GY G + G + +H GG G + G G + GG YN+GG Sbjct: 55 GGYHNGGGGYNNGGGYHNGGGGYNNGGGYHNGGGGYNNG---GGHHNGGGGYNNGG 107
>GRP1_CHERU (P11898) Glycine-rich protein HC1| Length = 144 Score = 27.3 bits (59), Expect = 9.0 Identities = 18/56 (32%), Positives = 24/56 (42%), Gaps = 2/56 (3%) Frame = -1 Query: 362 GSYGEAHRGY--ASGRYESFGERPDYPEFHGGGQGRDLGFEHRGQYPGGRAYNSGG 201 G Y GY G + G + +H GG G + G G + GG YN+GG Sbjct: 55 GGYHNGGGGYNNGGGYHNGGGGYNNGGGYHNGGGGYNNG---GGHHNGGGGYNNGG 107
>GRP10_BRANA (Q05966) Glycine-rich RNA-binding protein 10| Length = 169 Score = 27.3 bits (59), Expect = 9.0 Identities = 19/56 (33%), Positives = 22/56 (39%) Frame = -1 Query: 362 GSYGEAHRGYASGRYESFGERPDYPEFHGGGQGRDLGFEHRGQYPGGRAYNSGGRR 195 G YG G G +G+R + GG GR G G GG Y GG R Sbjct: 96 GGYGGRGGGGYGGGGGGYGDRRGGGGYGSGGGGRGGG----GYGSGGGGYGGGGGR 147
>RP3A_HUMAN (Q9Y2J0) Rabphilin-3A (Exophilin-1)| Length = 694 Score = 27.3 bits (59), Expect = 9.0 Identities = 16/42 (38%), Positives = 19/42 (45%) Frame = -1 Query: 389 PPPAAASSRGSYGEAHRGYASGRYESFGERPDYPEFHGGGQG 264 P PA+A RG+YG R + R S R H GG G Sbjct: 218 PDPASAPGRGNYGPPVRRASEARMSS-SSRDSESWDHSGGAG 258
>SCD6_YEAST (P45978) Protein SCD6| Length = 349 Score = 27.3 bits (59), Expect = 9.0 Identities = 16/42 (38%), Positives = 20/42 (47%), Gaps = 1/42 (2%) Frame = -1 Query: 317 ESFGERPDYPEFHGGGQGRDLGFEHRGQYPGGRAYNS-GGRR 195 ++FG+ P FH G GR RG Y G R GG+R Sbjct: 274 DTFGQASARPRFHSRGLGRG-----RGNYRGNRGNRGRGGQR 310
>PEX13_YEAST (P80667) Peroxisomal membrane protein PAS20 (Peroxin-13)| Length = 386 Score = 27.3 bits (59), Expect = 9.0 Identities = 21/74 (28%), Positives = 29/74 (39%), Gaps = 27/74 (36%) Frame = -1 Query: 389 PPPAAASSRGSYGEAHR-------------------------GYASGRYESFGE--RPDY 291 P PAA +S G+YGE++ G + GRY G +Y Sbjct: 60 PRPAALNSSGTYGESNTIPGIYGNSNYGIPYDNNPYSMNSIYGNSIGRYGYGGSYYGNNY 119 Query: 290 PEFHGGGQGRDLGF 249 F+GGG G G+ Sbjct: 120 GSFYGGGYGAGAGY 133
>COX3_MARPO (P26858) Cytochrome c oxidase subunit 3 (EC 1.9.3.1) (Cytochrome c| oxidase polypeptide III) Length = 265 Score = 27.3 bits (59), Expect = 9.0 Identities = 12/18 (66%), Positives = 15/18 (83%) Frame = +3 Query: 261 STLAPTMELWVIWPLPKG 314 S+LAPT+E+ IWP PKG Sbjct: 107 SSLAPTVEIGAIWP-PKG 123
>COX3_HELAN (P32808) Cytochrome c oxidase subunit 3 (EC 1.9.3.1) (Cytochrome c| oxidase polypeptide III) Length = 265 Score = 27.3 bits (59), Expect = 9.0 Identities = 14/35 (40%), Positives = 21/35 (60%) Frame = +3 Query: 210 VISTTSRVLATVLKTKISTLAPTMELWVIWPLPKG 314 ++S + A + S+LAPT+E+ IWP PKG Sbjct: 90 IVSEVMFLFALFRASSHSSLAPTVEIGGIWP-PKG 123
>Y684_MYCPN (P75109) Protein MG468 homolog (K05_orf1882)| Length = 1882 Score = 27.3 bits (59), Expect = 9.0 Identities = 21/78 (26%), Positives = 39/78 (50%), Gaps = 2/78 (2%) Frame = -2 Query: 241 VANTLEVVLITLADVDSED-GLVEQSAILASLQLGLSFRGKFKVNFFRSLVPAAF-ECKH 68 + N EV+ T+ VD G + + + LG+S + K F SL + + ++ Sbjct: 1742 IRNNAEVLFNTVNQVDGFLLGTIIPFIFITCVVLGISMLEEMK-RIFISLKSIGYKDSQN 1800 Query: 67 L*NLFCDYVPVFIQALII 14 L +L C ++P F+ +L+I Sbjct: 1801 LVSLLCFFIPAFVLSLLI 1818
>PTPRS_HUMAN (Q13332) Receptor-type tyrosine-protein phosphatase S precursor (EC| 3.1.3.48) (R-PTP-S) (Protein-tyrosine phosphatase sigma) (R-PTP-sigma) Length = 1948 Score = 27.3 bits (59), Expect = 9.0 Identities = 16/44 (36%), Positives = 21/44 (47%) Frame = -1 Query: 350 EAHRGYASGRYESFGERPDYPEFHGGGQGRDLGFEHRGQYPGGR 219 E R Y + R+ P FH G Q + GF++RG PG R Sbjct: 1203 EVPRPYIAARFSVLP-----PTFHPGDQKQYGGFDNRGLEPGHR 1241
>COX3_PISOC (P25003) Cytochrome c oxidase subunit 3 (EC 1.9.3.1) (Cytochrome c| oxidase polypeptide III) Length = 260 Score = 27.3 bits (59), Expect = 9.0 Identities = 13/21 (61%), Positives = 15/21 (71%) Frame = +3 Query: 261 STLAPTMELWVIWPLPKGFIP 323 S+LAPT+EL V WP P G P Sbjct: 103 SSLAPTIELGVSWP-PTGITP 122
>ANTF_SARPE (Q08617) Antifungal protein precursor (AFP)| Length = 85 Score = 27.3 bits (59), Expect = 9.0 Identities = 14/42 (33%), Positives = 19/42 (45%) Frame = -1 Query: 362 GSYGEAHRGYASGRYESFGERPDYPEFHGGGQGRDLGFEHRG 237 G G GYA G + G HGG G+ G+++RG Sbjct: 51 GQDGHGQHGYAHGHSDQHG--------HGGQHGQHDGYKNRG 84
>COS10_YEAST (P52924) Protein COS10| Length = 374 Score = 27.3 bits (59), Expect = 9.0 Identities = 21/55 (38%), Positives = 25/55 (45%), Gaps = 7/55 (12%) Frame = -3 Query: 393 HTSSCC---CFVSRFLWRGS----SGLCIWSV*ILWGAARLPRVPWWGPRSRSWF 250 H+S C F +R W S SG IWS + W LP WWG S +WF Sbjct: 16 HSSFCLPEDIFRNRLTWLCSEIRNSGFWIWS--LSW----LPLAVWWGMAS-TWF 63
>INVO_PIG (P18175) Involucrin| Length = 347 Score = 27.3 bits (59), Expect = 9.0 Identities = 15/55 (27%), Positives = 24/55 (43%), Gaps = 3/55 (5%) Frame = +2 Query: 233 IGHGAQ---NQDLDLGPHHGTLGNLAAPQRIHTDQMHNPDEPLHKNLETKQQQEE 388 +GH Q +Q+ +L H + Q +H DQ E + L QQQ++ Sbjct: 152 VGHHQQQQESQEQELHVDHHQQQQESQEQELHVDQQQQQQESQEQELHVDQQQQQ 206
>DBP80_DROME (O61305) DEAD-box helicase Dbp80 (EC 3.6.1.-)| Length = 460 Score = 27.3 bits (59), Expect = 9.0 Identities = 21/81 (25%), Positives = 38/81 (46%), Gaps = 6/81 (7%) Frame = +3 Query: 63 YKCLHSKAAGTKLLKKFTLNFPRKDKPS*SEAKMAD------CSTKPSSESTSARVISTT 224 ++ LH KA+ K + N P K + + +AD ++ + T+A V++ Sbjct: 75 FEALHLKASLLKGIYAMGFNTPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAML 134 Query: 225 SRVLATVLKTKISTLAPTMEL 287 SRV + ++ L+PT EL Sbjct: 135 SRVNVCLNHPQVLCLSPTYEL 155
>IF2_STRAW (Q82K53) Translation initiation factor IF-2| Length = 1046 Score = 27.3 bits (59), Expect = 9.0 Identities = 18/66 (27%), Positives = 24/66 (36%), Gaps = 4/66 (6%) Frame = -1 Query: 386 PPAAASSRGSYGEAHRGYASGRYESFGERPDYPEFHG----GGQGRDLGFEHRGQYPGGR 219 P + + G+ G G G+R D + G GGQ G G PG Sbjct: 158 PKPGGARPATPGQGQGGQVRGERTDRGDRGDRGDRQGAARPGGQAPRPGARPAGPRPGNN 217 Query: 218 AYNSGG 201 + SGG Sbjct: 218 PFTSGG 223
>VG02_BPP22 (P26745) DNA packaging protein gp2 (Terminase large subunit)| Length = 499 Score = 27.3 bits (59), Expect = 9.0 Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 9/49 (18%) Frame = -1 Query: 296 DYPE--FHGGGQ-------GRDLGFEHRGQYPGGRAYNSGGRRF*RWLG 177 DYPE F G Q ++ F G+YPG + Y + G+ W G Sbjct: 52 DYPERCFMAGNQLGKSFTGAAEVAFHLTGRYPGTKGYPADGKYGGEWKG 100
>M130_STRPU (P08472) Mesenchyme-specific cell surface glycoprotein precursor| (MSP130) Length = 779 Score = 27.3 bits (59), Expect = 9.0 Identities = 19/55 (34%), Positives = 23/55 (41%), Gaps = 1/55 (1%) Frame = -1 Query: 386 PPAAASSRGSYGEAHRGYASGRYESFGERPDYPEFHG-GGQGRDLGFEHRGQYPG 225 P A A +G G+ G G + YP G GGQG G +G YPG Sbjct: 259 PNAGAGGQGGQGQYPGQGGQGGQGGQGGQGQYPGQGGQGGQGGQGGQGGQGGYPG 313
>RBM3_MOUSE (O89086) Putative RNA-binding protein 3 (RNA-binding motif protein| 3) Length = 153 Score = 27.3 bits (59), Expect = 9.0 Identities = 19/55 (34%), Positives = 25/55 (45%) Frame = -1 Query: 359 SYGEAHRGYASGRYESFGERPDYPEFHGGGQGRDLGFEHRGQYPGGRAYNSGGRR 195 S G +GY SGRY+S P +G G GR ++ G G Y+ G R Sbjct: 102 SRGGGDQGYGSGRYDS------RPGGYGYGYGRSR--DYSGSQGGYDRYSGGNYR 148 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 58,331,025 Number of Sequences: 219361 Number of extensions: 1217951 Number of successful extensions: 4463 Number of sequences better than 10.0: 105 Number of HSP's better than 10.0 without gapping: 4082 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4393 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 1365190992 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
