ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart23h12
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|AL606647.3|OSJN00096 Oryza sativa genomic DNA, chromosome 4,... 121 2e-24
2dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 121 2e-24
3dbj|AK101107.1| Oryza sativa (japonica cultivar-group) cDNA clon... 100 7e-18
4ref|XM_473461.1| Oryza sativa (japonica cultivar-group), predic... 88 3e-14
5dbj|AK120794.1| Oryza sativa (japonica cultivar-group) cDNA clon... 88 3e-14
6gb|AY542311.1| Sorghum bicolor clone SB20O07 b1-1, b1-2, putativ... 88 3e-14
7gb|AF466203.1| Zea mays clone ZMBBb_0092E12, partial sequence 72 2e-09
8gb|AF318075.1| Zea mays cis-zeatin O-glucosyltransferase (ciszog... 72 2e-09
9ref|XM_473462.1| Oryza sativa (japonica cultivar-group), predic... 70 7e-09
10gb|AY082660.2| Zea mays cis-zeatin O-glucosyltransferase 2 (cisz... 70 7e-09
11dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 44 0.38
12emb|AL606628.3|OSJN00055 Oryza sativa genomic DNA, chromosome 4,... 44 0.38
13ref|XM_751002.1| Aspergillus fumigatus Af293 polyketide syntheta... 42 1.5
14emb|Y17317.1|AFY17317 Aspergillus fumigatus pksP gene 42 1.5
15gb|AC094098.4| Homo sapiens chromosome 5 clone RP11-141F7, compl... 42 1.5
16emb|AJ308100.1|SSC308100 Sus scrofa mRNA for secreted phosphopro... 42 1.5
17ref|NM_213780.1| Sus scrofa secreted phosphoprotein 24 (SPP2), mRNA 42 1.5
18gb|AF025541.1|AF025541 Aspergillus fumigatus polyketide synthase... 42 1.5
19gb|AC149631.3| Rhinolophus ferrumequinum clone VMRC7-80B12, comp... 40 6.0
20gb|AC135110.3| Mus musculus BAC clone RP23-392G14 from chromosom... 40 6.0
21ref|XM_389958.1| Gibberella zeae PH-1 chromosome 4 hypothetical ... 40 6.0
22gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete ... 40 6.0
23dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.0
24gb|DP000028.1| Rhinolophus ferrumequinum target 1 genomic scaffold 40 6.0
25gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 6.0
26emb|BX000510.1|CNS08CE0 Oryza sativa chromosome 12, . BAC OJ1769... 40 6.0
27gb|M88172.1|YSCY164A Saccharomyces cerevisiae homolog of the cif... 40 6.0 
>emb|AL606647.3|OSJN00096 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0012E24,
             complete sequence
          Length = 127506

 Score =  121 bits (61), Expect = 2e-24
 Identities = 133/157 (84%)
 Strand = Plus / Plus

                                                                         
Query: 287   gccacggaggcgcggacagcctccccgagcgcacgtgctcgttgccgcacggcaattcct 346
             ||||||||||||||||  || || |||||| | ||||| ||||| |||| ||| | ||||
Sbjct: 86294 gccacggaggcgcggatggcatctccgagctcccgtgcacgttgtcgcatggctactcct 86353

                                                                         
Query: 347   ttgtcggagagcatggcctcctcgatgacttcctggatggccttcgccggggtcacctcg 406
               ||  || |||||||||||||||||| ||||||||||| |||||||||| || ||||||
Sbjct: 86354 ccgttagaaagcatggcctcctcgatggcttcctggatgtccttcgccggcgtgacctcg 86413

                                                  
Query: 407   ctgtgcttctcccaggggcgcacgaggatgccggcct 443
              ||||||||||||| || |||||||||| ||||||||
Sbjct: 86414 ttgtgcttctcccatggccgcacgaggacgccggcct 86450



 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 77/88 (87%)
 Strand = Plus / Plus

                                                                         
Query: 356   agcatggcctcctcgatgacttcctggatggccttcgccggggtcacctcgctgtgcttc 415
             ||||| |||||||| ||||| ||||||||||||| |||||||  ||||||||||||||||
Sbjct: 90938 agcatcgcctcctcaatgacctcctggatggcctccgccgggaccacctcgctgtgcttc 90997

                                         
Query: 416   tcccaggggcgcacgaggatgccggcct 443
             ||||| || | |||||||| ||| ||||
Sbjct: 90998 tcccatggcctcacgaggaggccagcct 91025



 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 56/63 (88%)
 Strand = Plus / Plus

                                                                         
Query: 356   agcatggcctcctcgatgacttcctggatggccttcgccggggtcacctcgctgtgcttc 415
             ||||| ||||| |||||||| || |||||||||| |||||||  ||||||||||||||||
Sbjct: 95586 agcatcgcctcttcgatgacctcttggatggcctccgccgggaccacctcgctgtgcttc 95645

                
Query: 416   tcc 418
             |||
Sbjct: 95646 tcc 95648
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score =  121 bits (61), Expect = 2e-24
 Identities = 133/157 (84%)
 Strand = Plus / Plus

                                                                            
Query: 287      gccacggaggcgcggacagcctccccgagcgcacgtgctcgttgccgcacggcaattcct 346
                ||||||||||||||||  || || |||||| | ||||| ||||| |||| ||| | ||||
Sbjct: 27817622 gccacggaggcgcggatggcatctccgagctcccgtgcacgttgtcgcatggctactcct 27817681

                                                                            
Query: 347      ttgtcggagagcatggcctcctcgatgacttcctggatggccttcgccggggtcacctcg 406
                  ||  || |||||||||||||||||| ||||||||||| |||||||||| || ||||||
Sbjct: 27817682 ccgttagaaagcatggcctcctcgatggcttcctggatgtccttcgccggcgtgacctcg 27817741

                                                     
Query: 407      ctgtgcttctcccaggggcgcacgaggatgccggcct 443
                 ||||||||||||| || |||||||||| ||||||||
Sbjct: 27817742 ttgtgcttctcccatggccgcacgaggacgccggcct 27817778



 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 77/88 (87%)
 Strand = Plus / Plus

                                                                            
Query: 356      agcatggcctcctcgatgacttcctggatggccttcgccggggtcacctcgctgtgcttc 415
                ||||| |||||||| ||||| ||||||||||||| |||||||  ||||||||||||||||
Sbjct: 27822266 agcatcgcctcctcaatgacctcctggatggcctccgccgggaccacctcgctgtgcttc 27822325

                                            
Query: 416      tcccaggggcgcacgaggatgccggcct 443
                ||||| || | |||||||| ||| ||||
Sbjct: 27822326 tcccatggcctcacgaggaggccagcct 27822353



 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 56/63 (88%)
 Strand = Plus / Plus

                                                                            
Query: 356      agcatggcctcctcgatgacttcctggatggccttcgccggggtcacctcgctgtgcttc 415
                ||||| ||||| |||||||| || |||||||||| |||||||  ||||||||||||||||
Sbjct: 27826914 agcatcgcctcttcgatgacctcttggatggcctccgccgggaccacctcgctgtgcttc 27826973

                   
Query: 416      tcc 418
                |||
Sbjct: 27826974 tcc 27826976



 Score = 44.1 bits (22), Expect = 0.38
 Identities = 46/54 (85%)
 Strand = Plus / Minus

                                                                      
Query: 225      tcgatcaccttgtgatgtaagcagtgaaatgatctaggtccttgcgcgatgaac 278
                |||||||||||||||||| |||| |||| |  || || || |||||||||||||
Sbjct: 28311348 tcgatcaccttgtgatgtgagcaatgaagtcctccagatcattgcgcgatgaac 28311295
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>dbj|AK101107.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033025D23, full
            insert sequence
          Length = 2456

 Score = 99.6 bits (50), Expect = 7e-18
 Identities = 132/158 (83%), Gaps = 1/158 (0%)
 Strand = Plus / Minus

                                                                        
Query: 287  gccacggaggcgcggacagcctccccgagcgcacgtgctcgttgccgcacggcaattcct 346
            ||||||||||||||||  || || |||| | | ||||| ||||| |||| ||| | ||||
Sbjct: 1367 gccacggaggcgcggatggcatctccgaactcccgtgcacgttgtcgcatggctactcct 1308

                                                                        
Query: 347  ttgtcggagagcatggcc-tcctcgatgacttcctggatggccttcgccggggtcacctc 405
              ||  || ||||||||| ||||||||| ||||||||||| |||||||||| || |||||
Sbjct: 1307 ccgttagaaagcatggccctcctcgatggcttcctggatgtccttcgccggcgtgacctc 1248

                                                  
Query: 406  gctgtgcttctcccaggggcgcacgaggatgccggcct 443
            | ||||||||||||| || |||||||||| ||||||||
Sbjct: 1247 gttgtgcttctcccatggccgcacgaggacgccggcct 1210
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>ref|XM_473461.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1392

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 77/88 (87%)
 Strand = Plus / Minus

                                                                        
Query: 356  agcatggcctcctcgatgacttcctggatggccttcgccggggtcacctcgctgtgcttc 415
            ||||| |||||||| ||||| ||||||||||||| |||||||  ||||||||||||||||
Sbjct: 1265 agcatcgcctcctcaatgacctcctggatggcctccgccgggaccacctcgctgtgcttc 1206

                                        
Query: 416  tcccaggggcgcacgaggatgccggcct 443
            ||||| || | |||||||| ||| ||||
Sbjct: 1205 tcccatggcctcacgaggaggccagcct 1178
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>dbj|AK120794.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023012B12, full
            insert sequence
          Length = 1720

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 77/88 (87%)
 Strand = Plus / Minus

                                                                        
Query: 356  agcatggcctcctcgatgacttcctggatggccttcgccggggtcacctcgctgtgcttc 415
            ||||| |||||||| ||||| ||||||||||||| |||||||  ||||||||||||||||
Sbjct: 1328 agcatcgcctcctcaatgacctcctggatggcctccgccgggaccacctcgctgtgcttc 1269

                                        
Query: 416  tcccaggggcgcacgaggatgccggcct 443
            ||||| || | |||||||| ||| ||||
Sbjct: 1268 tcccatggcctcacgaggaggccagcct 1241
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>gb|AY542311.1| Sorghum bicolor clone SB20O07 b1-1, b1-2, putative genetic modifier,
             hypothetical protein, putative NAM protein, putative
             cis-zeatin O-glucosyltransferases, putative small nuclear
             ribonucleoprotein, putative cis-zeatin
             O-glucosyltransferase, putative glutathione peroxidase,
             putative copper-exporting ATPases, putative
             serine/threonine dehydratase, and putative actin
             depolymerizing factor genes, complete cds; and
             hypothetical protein gene, partial cds
          Length = 157237

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 167/208 (80%)
 Strand = Plus / Minus

                                                                         
Query: 234   ttgtgatgtaagcagtgaaatgatctaggtccttgcgcgatgaaccgccgtcagccacgg 293
             ||||||| | |||| ||||||  || ||||| ||||||||||| ||||||||||||| | 
Sbjct: 79042 ttgtgatatgagcaatgaaatcgtcaaggtctttgcgcgatgagccgccgtcagccaggc 78983

                                                                         
Query: 294   aggcgcggacagcctccccgagcgcacgtgctcgttgccgcacggcaattcctttgtcgg 353
             |||| ||||| ||||| |||||| |    ||||| |||||||| || | ||||| ||| |
Sbjct: 78982 aggcacggacggcctctccgagcaccttcgctcgctgccgcaccgccactccttggtcag 78923

                                                                         
Query: 354   agagcatggcctcctcgatgacttcctggatggccttcgccggggtcacctcgctgtgct 413
             | |||||||| |||||||||||||    |||| ||| ||||||  ||||||| | |||||
Sbjct: 78922 aaagcatggcgtcctcgatgacttgtctgatgacctccgccggaatcacctcaccgtgct 78863

                                         
Query: 414   tctcccaggggcgcacgaggatgccggc 441
             ||||||| || | ||| ||||| |||||
Sbjct: 78862 tctcccatggcctcaccaggatcccggc 78835



 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 98/119 (82%)
 Strand = Plus / Minus

                                                                         
Query: 278   ccgccgtcagccacggaggcgcggacagcctccccgagcgcacgtgctcgttgccgcacg 337
             |||||||| |||||||||||||| || |||||||||||| |   ||| || |||||||| 
Sbjct: 69820 ccgccgtcggccacggaggcgcgaaccgcctccccgagctcctttgcccgctgccgcacc 69761

                                                                        
Query: 338   gcaattcctttgtcggagagcatggcctcctcgatgacttcctggatggccttcgccgg 396
             || || ||  |||| || ||||| ||||||||||| || | ||||||||||| ||||||
Sbjct: 69760 gccatgccgctgtcagatagcatcgcctcctcgatcaccttctggatggcctgcgccgg 69702



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                      
Query: 260   aggtccttgcgcgatgaaccgccgtcagccacggaggcgcg 300
             |||||||||||||| || ||||| ||||| |||||||||||
Sbjct: 96666 aggtccttgcgcgaggacccgccctcagcgacggaggcgcg 96626
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>gb|AF466203.1| Zea mays clone ZMBBb_0092E12, partial sequence
          Length = 147198

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 135/168 (80%)
 Strand = Plus / Plus

                                                                         
Query: 229   tcaccttgtgatgtaagcagtgaaatgatctaggtccttgcgcgatgaaccgccgtcagc 288
             |||||||||||||||  || ||||||  || || ||||| |||||    |||||||||||
Sbjct: 65638 tcaccttgtgatgtagccaatgaaatcgtcgagatccttacgcgagttcccgccgtcagc 65697

                                                                         
Query: 289   cacggaggcgcggacagcctccccgagcgcacgtgctcgttgccgcacggcaattccttt 348
             |||||||||||| || |||||||||||| |    || || |||||||| || || ||  |
Sbjct: 65698 cacggaggcgcgaaccgcctccccgagctccttggcccgctgccgcaccgccatcccgct 65757

                                                             
Query: 349   gtcggagagcatggcctcctcgatgacttcctggatggccttcgccgg 396
             |||||| ||||| ||||||||||| || |  |||||||||| ||||||
Sbjct: 65758 gtcggatagcattgcctcctcgatcaccttttggatggcctgcgccgg 65805
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>gb|AF318075.1| Zea mays cis-zeatin O-glucosyltransferase (ciszog1) mRNA, complete
            cds
          Length = 1404

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 135/168 (80%)
 Strand = Plus / Minus

                                                                        
Query: 229  tcaccttgtgatgtaagcagtgaaatgatctaggtccttgcgcgatgaaccgccgtcagc 288
            |||||||||||||||  || ||||||  || || ||||| |||||    |||||||||||
Sbjct: 1404 tcaccttgtgatgtagccaatgaaatcgtcgagatccttacgcgagttcccgccgtcagc 1345

                                                                        
Query: 289  cacggaggcgcggacagcctccccgagcgcacgtgctcgttgccgcacggcaattccttt 348
            |||||||||||| || |||||||||||| |    || || |||||||| || || ||  |
Sbjct: 1344 cacggaggcgcgaaccgcctccccgagctccttggcccgctgccgcaccgccatcccgct 1285

                                                            
Query: 349  gtcggagagcatggcctcctcgatgacttcctggatggccttcgccgg 396
            |||||| ||||| ||||||||||| || |  |||||||||| ||||||
Sbjct: 1284 gtcggatagcattgcctcctcgatcaccttttggatggcctgcgccgg 1237
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>ref|XM_473462.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1392

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 56/63 (88%)
 Strand = Plus / Minus

                                                                        
Query: 356  agcatggcctcctcgatgacttcctggatggccttcgccggggtcacctcgctgtgcttc 415
            ||||| ||||| |||||||| || |||||||||| |||||||  ||||||||||||||||
Sbjct: 1265 agcatcgcctcttcgatgacctcttggatggcctccgccgggaccacctcgctgtgcttc 1206

               
Query: 416  tcc 418
            |||
Sbjct: 1205 tcc 1203
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>gb|AY082660.2| Zea mays cis-zeatin O-glucosyltransferase 2 (ciszog2) gene, complete
            cds
          Length = 3920

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 98/119 (82%)
 Strand = Plus / Minus

                                                                        
Query: 278  ccgccgtcagccacggaggcgcggacagcctccccgagcgcacgtgctcgttgccgcacg 337
            ||||||||||||||||||||||| || |||||||||||| |    || || |||||||| 
Sbjct: 3871 ccgccgtcagccacggaggcgcgaaccgcctccccgagctccttggcccgctgccgcacc 3812

                                                                       
Query: 338  gcaattcctttgtcggagagcatggcctcctcgatgacttcctggatggccttcgccgg 396
            || || ||  ||||||| ||||| ||||||||||| || |  |||||||||| ||||||
Sbjct: 3811 gccatcccgctgtcggatagcattgcctcctcgatcaccttttggatggcctgcgccgg 3753
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                             
Query: 388     cttcgccggggtcacctcgctgtgcttctc 417
               ||||||||||||||||  ||||||||||||
Sbjct: 2794632 cttcgccggggtcaccctgctgtgcttctc 2794661
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>emb|AL606628.3|OSJN00055 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0017B10,
              complete sequence
          Length = 150957

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 46/54 (85%)
 Strand = Plus / Minus

                                                                    
Query: 225    tcgatcaccttgtgatgtaagcagtgaaatgatctaggtccttgcgcgatgaac 278
              |||||||||||||||||| |||| |||| |  || || || |||||||||||||
Sbjct: 103656 tcgatcaccttgtgatgtgagcaatgaagtcctccagatcattgcgcgatgaac 103603
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>ref|XM_751002.1| Aspergillus fumigatus Af293 polyketide synthetase PksP (Afu2g17600)
            partial mRNA
          Length = 6441

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 370  gatgacttcctggatggcctt 390
            |||||||||||||||||||||
Sbjct: 4446 gatgacttcctggatggcctt 4426
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>emb|Y17317.1|AFY17317 Aspergillus fumigatus pksP gene
          Length = 7721

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 370  gatgacttcctggatggcctt 390
            |||||||||||||||||||||
Sbjct: 5133 gatgacttcctggatggcctt 5113
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>gb|AC094098.4| Homo sapiens chromosome 5 clone RP11-141F7, complete sequence
          Length = 138425

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 77     ctgacacatgaattattaaac 97
              |||||||||||||||||||||
Sbjct: 117191 ctgacacatgaattattaaac 117171
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>emb|AJ308100.1|SSC308100 Sus scrofa mRNA for secreted phosphoprotein 24 precursor (SPP2
           gene)
          Length = 864

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 287 gccacggaggcgcggacagcctccc 311
           ||||||||||||| |||||||||||
Sbjct: 261 gccacggaggcgccgacagcctccc 237
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>ref|NM_213780.1| Sus scrofa secreted phosphoprotein 24 (SPP2), mRNA
          Length = 864

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 287 gccacggaggcgcggacagcctccc 311
           ||||||||||||| |||||||||||
Sbjct: 261 gccacggaggcgccgacagcctccc 237
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>gb|AF025541.1|AF025541 Aspergillus fumigatus polyketide synthase (alb1) gene, complete cds
          Length = 7972

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 370  gatgacttcctggatggcctt 390
            |||||||||||||||||||||
Sbjct: 5192 gatgacttcctggatggcctt 5172
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>gb|AC149631.3| Rhinolophus ferrumequinum clone VMRC7-80B12, complete sequence
          Length = 142320

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 231   accttgtgatgtaagcagtgaaatgatc 258
             ||||||||||||||| | ||||||||||
Sbjct: 98496 accttgtgatgtaagtattgaaatgatc 98469
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>gb|AC135110.3| Mus musculus BAC clone RP23-392G14 from chromosome 18, complete
             sequence
          Length = 182942

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 168   ggcatcctccaacatggcag 187
             ||||||||||||||||||||
Sbjct: 66578 ggcatcctccaacatggcag 66559
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>ref|XM_389958.1| Gibberella zeae PH-1 chromosome 4 hypothetical protein (FG09782.1)
           partial mRNA
          Length = 3183

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 290 acggaggcgcggacagcctc 309
           ||||||||||||||||||||
Sbjct: 869 acggaggcgcggacagcctc 850
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>gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete sequence
          Length = 2726152

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 297     cgcggacagcctccccgagc 316
               ||||||||||||||||||||
Sbjct: 1908325 cgcggacagcctccccgagc 1908306
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12,
              complete sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 160    catcaaaaggcatcctccaa 179
              ||||||||||||||||||||
Sbjct: 565601 catcaaaaggcatcctccaa 565620
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>gb|DP000028.1| Rhinolophus ferrumequinum target 1 genomic scaffold
          Length = 1756392

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 231     accttgtgatgtaagcagtgaaatgatc 258
               ||||||||||||||| | ||||||||||
Sbjct: 1585843 accttgtgatgtaagtattgaaatgatc 1585816
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 160    catcaaaaggcatcctccaa 179
              ||||||||||||||||||||
Sbjct: 565601 catcaaaaggcatcctccaa 565620
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>emb|BX000510.1|CNS08CE0 Oryza sativa chromosome 12, . BAC OJ1769_D07 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 115859

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 160   catcaaaaggcatcctccaa 179
             ||||||||||||||||||||
Sbjct: 83242 catcaaaaggcatcctccaa 83223
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>gb|M88172.1|YSCY164A Saccharomyces cerevisiae homolog of the cif1 gene and 2 ORFs,
            complete cds, and one ORF, 5' end
          Length = 6359

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 178  aacatggcagtgggcatcaa 197
            ||||||||||||||||||||
Sbjct: 2523 aacatggcagtgggcatcaa 2542


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,101,821
Number of Sequences: 3902068
Number of extensions: 3101821
Number of successful extensions: 50426
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 50257
Number of HSP's gapped (non-prelim): 161
length of query: 445
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 423
effective length of database: 17,147,199,772
effective search space: 7253265503556
effective search space used: 7253265503556
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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