Clone Name | rbart23h11 |
---|---|
Clone Library Name | barley_pub |
>gb|AC152400.9| Mus musculus chromosome 3, clone RP23-277L18, complete sequence Length = 190913 Score = 40.1 bits (20), Expect = 3.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 157 actcatgtaaatttaatcag 176 |||||||||||||||||||| Sbjct: 65460 actcatgtaaatttaatcag 65479
>gb|DQ002016.1| Eurycorymbus cavaleriei clone EC6 microsatellite sequence Length = 397 Score = 40.1 bits (20), Expect = 3.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 175 aggcaggtgatggtaatcat 194 |||||||||||||||||||| Sbjct: 119 aggcaggtgatggtaatcat 138
>gb|AC016711.9| Homo sapiens BAC clone RP11-249O24 from 2, complete sequence Length = 122880 Score = 40.1 bits (20), Expect = 3.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 24 taaaataaatctagatatgt 43 |||||||||||||||||||| Sbjct: 112884 taaaataaatctagatatgt 112865
>emb|BX469886.5| Zebrafish DNA sequence from clone CH211-127D20 in linkage group 19, complete sequence Length = 151598 Score = 40.1 bits (20), Expect = 3.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 66 ccaataatcatatcaacaag 85 |||||||||||||||||||| Sbjct: 26535 ccaataatcatatcaacaag 26516
>emb|AM085663.1| Minuartia biflora chloroplast trnT-trnL intergenic spacer, isolate MB22 Length = 1029 Score = 40.1 bits (20), Expect = 3.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 16 gcaataactaaaataaatctagat 39 ||||||||||||| |||||||||| Sbjct: 142 gcaataactaaaaaaaatctagat 165
>emb|AM085662.1| Minuartia biflora chloroplast trnT-trnL intergenic spacer, isolate MB21 Length = 1301 Score = 40.1 bits (20), Expect = 3.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 16 gcaataactaaaataaatctagat 39 ||||||||||||| |||||||||| Sbjct: 414 gcaataactaaaaaaaatctagat 437
>emb|AM085660.1| Minuartia biflora chloroplast trnT-trnL intergenic spacer, isolate MB19 Length = 1297 Score = 40.1 bits (20), Expect = 3.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 16 gcaataactaaaataaatctagat 39 ||||||||||||| |||||||||| Sbjct: 410 gcaataactaaaaaaaatctagat 433
>emb|AM085658.1| Minuartia biflora chloroplast trnT-trnL intergenic spacer, isolate MB17 Length = 1297 Score = 40.1 bits (20), Expect = 3.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 16 gcaataactaaaataaatctagat 39 ||||||||||||| |||||||||| Sbjct: 410 gcaataactaaaaaaaatctagat 433
>emb|AM085657.1| Minuartia biflora chloroplast trnT-trnL intergenic spacer, isolate MB16 Length = 1297 Score = 40.1 bits (20), Expect = 3.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 16 gcaataactaaaataaatctagat 39 ||||||||||||| |||||||||| Sbjct: 410 gcaataactaaaaaaaatctagat 433
>emb|AM085656.1| Minuartia biflora chloroplast trnT-trnL intergenic spacer, isolate MB15 Length = 1297 Score = 40.1 bits (20), Expect = 3.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 16 gcaataactaaaataaatctagat 39 ||||||||||||| |||||||||| Sbjct: 410 gcaataactaaaaaaaatctagat 433
>emb|AM085655.1| Minuartia biflora chloroplast trnT-trnL intergenic spacer, isolate MB14 Length = 1297 Score = 40.1 bits (20), Expect = 3.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 16 gcaataactaaaataaatctagat 39 ||||||||||||| |||||||||| Sbjct: 410 gcaataactaaaaaaaatctagat 433
>emb|AM085654.1| Minuartia biflora chloroplast trnT-trnL intergenic spacer, isolate MB11 Length = 1297 Score = 40.1 bits (20), Expect = 3.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 16 gcaataactaaaataaatctagat 39 ||||||||||||| |||||||||| Sbjct: 410 gcaataactaaaaaaaatctagat 433
>emb|AM085653.1| Minuartia biflora chloroplast trnT-trnL intergenic spacer, isolate MB9 Length = 1297 Score = 40.1 bits (20), Expect = 3.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 16 gcaataactaaaataaatctagat 39 ||||||||||||| |||||||||| Sbjct: 410 gcaataactaaaaaaaatctagat 433
>emb|AM085652.1| Minuartia biflora chloroplast trnT-trnL intergenic spacer, isolate MB1 Length = 1297 Score = 40.1 bits (20), Expect = 3.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 16 gcaataactaaaataaatctagat 39 ||||||||||||| |||||||||| Sbjct: 410 gcaataactaaaaaaaatctagat 433 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,088,709 Number of Sequences: 3902068 Number of extensions: 2088709 Number of successful extensions: 39209 Number of sequences better than 10.0: 14 Number of HSP's better than 10.0 without gapping: 14 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 39193 Number of HSP's gapped (non-prelim): 16 length of query: 263 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 241 effective length of database: 17,147,199,772 effective search space: 4132475145052 effective search space used: 4132475145052 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)