ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart23h04
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1SPEG_HUMAN (Q15772) Striated muscle preferentially expressed pro... 33 0.53
2CFAB_HUMAN (P00751) Complement factor B precursor (EC 3.4.21.47)... 29 5.9

>SPEG_HUMAN (Q15772) Striated muscle preferentially expressed protein kinase (EC|
            2.7.11.1) (Aortic preferentially expressed protein 1)
            (APEG-1)
          Length = 3223

 Score = 32.7 bits (73), Expect = 0.53
 Identities = 21/64 (32%), Positives = 25/64 (39%)
 Frame = -2

Query: 332  EDGRSPERTPHEAEVVELVAYATYPYGYTRGSRGTTSRASWAVRRTPRAGPRALQRGYSN 153
            E GR+P +         L +    P       RG   R S A    PRAGPR L RG   
Sbjct: 1975 EQGRAPSQDQEAPSPEALPSPGQEPAAGASPRRGELRRGSSAESALPRAGPRELGRGLHK 2034

Query: 152  GVSM 141
              S+
Sbjct: 2035 AASV 2038



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>CFAB_HUMAN (P00751) Complement factor B precursor (EC 3.4.21.47) (C3/C5|
           convertase) (Properdin factor B) (Glycine-rich beta
           glycoprotein) (GBG) (PBF2) [Contains: Complement factor
           B Ba fragment; Complement factor B Bb fragment]
          Length = 764

 Score = 29.3 bits (64), Expect = 5.9
 Identities = 19/75 (25%), Positives = 31/75 (41%), Gaps = 2/75 (2%)
 Frame = -2

Query: 281 LVAYATYPYGYTRGSRGTTSRASWAVRRTPRAG--PRALQRGYSNGVSMRGVDW*VLEAC 108
           LV YATYP  + + S   +S A W  ++          L+ G +   +++ V        
Sbjct: 311 LVTYATYPKIWVKVSEADSSNADWVTKQLNEINYEDHKLKSGTNTKKALQAV-------Y 363

Query: 107 NGCRWATDVPVTSWS 63
           +   W  DVP   W+
Sbjct: 364 SMMSWPDDVPPEGWN 378


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 60,348,769
Number of Sequences: 219361
Number of extensions: 1068535
Number of successful extensions: 3226
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 3157
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3226
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3420806017
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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