Clone Information

BLAST Search Result

Clone Name	rbart23h01
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	YT35_STRFR (P20186) Hypothetical 35.5 kDa protein in transposon ...	38	0.019
2	BIOH_CHRVO (Q7NPW5) Carboxylesterase bioH (EC 3.1.1.1) (Biotin s...	37	0.032
3	DED1_GIBZE (Q4I7K4) ATP-dependent RNA helicase DED1 (EC 3.6.1.-)	36	0.055
4	MPA51_PHAAQ (P56164) Major pollen allergen Pha a 5.1 precursor (...	36	0.055
5	IF2_COREF (Q8FPA7) Translation initiation factor IF-2	35	0.12
6	GLIS3_MOUSE (Q6XP49) Zinc finger protein GLIS3 (GLI-similar 3)	35	0.16
7	EXTN_TOBAC (P13983) Extensin precursor (Cell wall hydroxyproline...	33	0.35
8	ACDA2_METKA (Q8TXF5) Putative acetyl-CoA decarbonylase/synthase ...	33	0.35
9	PHLB1_MOUSE (Q6PDH0) Pleckstrin homology-like domain family B me...	33	0.60
10	PHLB1_HUMAN (Q86UU1) Pleckstrin homology-like domain family B me...	32	0.79
11	IF2_STRAW (Q82K53) Translation initiation factor IF-2	32	0.79
12	WASIP_HUMAN (O43516) Wiskott-Aldrich syndrome protein-interactin...	32	0.79
13	HMCN1_HUMAN (Q96RW7) Hemicentin-1 precursor (Fibulin-6) (FIBL-6)	32	0.79
14	SRRM1_MOUSE (Q52KI8) Serine/arginine repetitive matrix protein 1...	32	0.79
15	WASL_RAT (O08816) Neural Wiskott-Aldrich syndrome protein (N-WASP)	32	1.0
16	WASL_MOUSE (Q91YD9) Neural Wiskott-Aldrich syndrome protein (N-W...	32	1.0
17	WASL_BOVIN (Q95107) Neural Wiskott-Aldrich syndrome protein (N-W...	32	1.0
18	ICP0_HHV2H (P28284) Trans-acting transcriptional protein ICP0 (V...	32	1.0
19	MUCDL_HUMAN (Q9HBB8) Mucin and cadherin-like protein precursor (...	32	1.3
20	IF2_DESDG (Q30WJ0) Translation initiation factor IF-2	32	1.3
21	RPB1_ENCCU (Q8SSC4) DNA-directed RNA polymerase II largest subun...	31	1.8
22	PALI_NEUCR (Q7SFN5) pH-response regulator protein palI/rim-9	31	1.8
23	XYLF_PSEPU (P23106) 2-hydroxymuconic semialdehyde hydrolase (EC ...	31	2.3
24	IF2_DESVH (Q72ER1) Translation initiation factor IF-2	31	2.3
25	RP54_RHISN (P22881) RNA polymerase sigma-54 factor	31	2.3
26	CJ095_HUMAN (Q9H7T3) Protein C10orf95	31	2.3
27	WASL_HUMAN (O00401) Neural Wiskott-Aldrich syndrome protein (N-W...	31	2.3
28	SRRM1_HUMAN (Q8IYB3) Serine/arginine repetitive matrix protein 1...	30	3.0
29	DPY10_CAEEL (P35800) Cuticle collagen dpy-10 precursor (Protein ...	30	3.0
30	COGA1_HUMAN (Q07092) Collagen alpha-1(XVI) chain precursor	30	3.0
31	DIDO1_HUMAN (Q9BTC0) Death-inducer obliterator 1 (DIO-1) (Death-...	30	3.0
32	RGL2_MOUSE (Q61193) Ral guanine nucleotide dissociation stimulat...	30	3.0
33	POL_SIVMK (P05897) Pol polyprotein [Contains: Protease (Retropep...	30	3.0
34	GCSH_TROWT (P64215) Glycine cleavage system H protein	30	3.9
35	GCSH_TROW8 (P64216) Glycine cleavage system H protein	30	3.9
36	DISS_TRIJE (Q7ZZM2) Disintegrin jerdostatin precursor	30	3.9
37	GCSH_STRAW (Q82JI1) Glycine cleavage system H protein	30	3.9
38	BIOH_AZOSE (Q5NZF6) Carboxylesterase bioH (EC 3.1.1.1) (Biotin s...	30	3.9
39	LRC25_MOUSE (Q8K1T1) Leucine-rich repeat-containing protein 25 p...	30	3.9
40	MYSC_ACACA (P10569) Myosin IC heavy chain	30	3.9
41	DAZP1_HUMAN (Q96EP5) DAZ-associated protein 1 (Deleted in azoosp...	30	5.1
42	MUTL_TREPA (O83325) DNA mismatch repair protein mutL	30	5.1
43	GCSH_CAUCR (Q9A352) Glycine cleavage system H protein	30	5.1
44	DAZP1_MOUSE (Q9JII5) DAZ-associated protein 1 (Deleted in azoosp...	30	5.1
45	SF01_HUMAN (Q15637) Splicing factor 1 (Zinc finger protein 162) ...	30	5.1
46	BIOH_NITEU (Q82SL8) Carboxylesterase bioH (EC 3.1.1.1) (Biotin s...	30	5.1
47	TPT_SPIOL (P11869) Triose phosphate/phosphate translocator, chlo...	30	5.1
48	SF01_MOUSE (Q64213) Splicing factor 1 (Zinc finger protein 162) ...	30	5.1
49	LYPD5_MOUSE (Q9D7Z7) Ly6/PLAUR domain-containing protein 5 precu...	30	5.1
50	TPT_FLAPR (P49131) Triose phosphate/phosphate translocator, chlo...	30	5.1
51	PIP_MYCPN (P75092) Putative proline iminopeptidase (EC 3.4.11.5)...	30	5.1
52	CVP5_PIMHY (Q8T0W1) Cysteine-rich venom protein 5 precursor	30	5.1
53	GRPE_STRCO (Q05562) Protein grpE (HSP-70 cofactor)	30	5.1
54	TPT1_BRAOB (P52177) Triose phosphate/phosphate translocator, chl...	29	6.7
55	CO3A1_HUMAN (P02461) Collagen alpha-1(III) chain precursor	29	6.7
56	FA13C_HUMAN (Q8NE31) Protein FAM13C1	29	6.7
57	DHYS_AERPE (Q9YE72) Probable deoxyhypusine synthase (EC 2.5.1.46...	29	6.7
58	SRRM1_PONPY (Q5R5Q2) Serine/arginine repetitive matrix protein 1	29	6.7
59	SRRM1_CHICK (Q5ZMJ9) Serine/arginine repetitive matrix protein 1	29	8.7
60	RPB1_SCHPO (P36594) DNA-directed RNA polymerase II largest subun...	29	8.7
61	NIFA_AZOBR (P30667) Nif-specific regulatory protein	29	8.7
62	IE63_HHV2H (P28276) Transcriptional regulator IE63 (VMW63) (ICP27)	29	8.7
63	SPL1_ARATH (Q9SMX9) Squamosa promoter-binding-like protein 1	29	8.7
64	SFPQ_HUMAN (P23246) Splicing factor, proline- and glutamine-rich...	29	8.7
65	TOR2X_HUMAN (Q8N2E6) Prosalusin precursor (Torsin-2A) (Torsin fa...	29	8.7
66	CR1KA_BACTM (Q45715) Pesticidal crystal protein cry1Ka (Insectic...	29	8.7
67	KIFC2_HUMAN (Q96AC6) Kinesin-like protein KIFC2	29	8.7
68	ERF1_LYCES (Q84XB3) Ethylene-responsive transcription factor 1 (...	29	8.7
69	TAU_SPECI (Q6TS35) Microtubule-associated protein tau	29	8.7
70	PCNT_HUMAN (O95613) Pericentrin (Pericentrin B) (Kendrin)	29	8.7
71	TPT_SOLTU (P29463) Triose phosphate/phosphate translocator, chlo...	29	8.7
72	LRP1_CHICK (P98157) Low-density lipoprotein receptor-related pro...	29	8.7
73	LAMB3_MOUSE (Q61087) Laminin beta-3 chain precursor (Laminin 5 b...	29	8.7
74	HXA2_CHICK (Q08727) Homeobox protein Hox-A2	29	8.7

>YT35_STRFR (P20186) Hypothetical 35.5 kDa protein in transposon Tn4556|
          Length = 348

 Score = 37.7 bits (86), Expect = 0.019
 Identities = 37/107 (34%), Positives = 41/107 (38%), Gaps = 18/107 (16%)
 Frame = +1

Query: 220 PPCHRPWGRGARPWAAHGTAPMAASA--RCTVRGQRAR*GPPRHAI-GAHPPHRRGTGSP 390
           P    P    + P AA   AP A     R T    R    P R  I  A PP RR  G+P
Sbjct: 233 PAPRPPASSASSPQAAAPAAPSATRLPRRTTPSAPRPSSRPARPPIPAARPPPRRTPGTP 292

Query: 391 -------------SPAGSNPTFRTRRSCPCA--GSRAPPAASPCSRK 486
                        SPA   P+  T R C  A  GS  PPAA P  R+
Sbjct: 293 RPAAARARAPAGCSPARRTPSAPTDRRCRAARRGSPRPPAARPPGRQ 339

to top

>BIOH_CHRVO (Q7NPW5) Carboxylesterase bioH (EC 3.1.1.1) (Biotin synthesis|
           protein bioH)
          Length = 254

 Score = 37.0 bits (84), Expect = 0.032
 Identities = 15/35 (42%), Positives = 22/35 (62%)
 Frame = -3

Query: 352 LWHGAEDLIVPVGLSRYIAQRLPWVQYHELPTAGH 248
           L++GA D I P+G  R++A+ LP    +E P A H
Sbjct: 198 LFYGARDAITPIGAGRWLAESLPDAVLYEFPQASH 232

to top

>DED1_GIBZE (Q4I7K4) ATP-dependent RNA helicase DED1 (EC 3.6.1.-)|
          Length = 675

 Score = 36.2 bits (82), Expect = 0.055
 Identities = 21/60 (35%), Positives = 27/60 (45%)
 Frame = +1

Query: 331 GPPRHAIGAHPPHRRGTGSPSPAGSNPTFRTRRSCPCAGSRAPPAASPCSRKVGMRTWGS 510
           GPP+      PPH RG G P PAG       +   P   +  PPAA+P    +G   W +
Sbjct: 19  GPPQGR-SYIPPHMRGRGGPPPAG------PQAGGPPVMNGGPPAAAPGPNGIGNSAWAN 71

to top

>MPA51_PHAAQ (P56164) Major pollen allergen Pha a 5.1 precursor (Pha A 5) (Clone|
           28)
          Length = 320

 Score = 36.2 bits (82), Expect = 0.055
 Identities = 26/52 (50%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
 Frame = -2

Query: 467 AAGGAREPAQGHDRRV-RKVG-LEPAGDGEPVPRR*GGCAPMAWRGGPHRAR 318
           AAGGA   A   D RV R  G L+ A     + R  GGC P+ WRGG HRAR
Sbjct: 268 AAGGAATVAAASDVRVCRSHGTLQDAC----LLRCRGGCQPVVWRGGSHRAR 315

to top

>IF2_COREF (Q8FPA7) Translation initiation factor IF-2|
          Length = 964

 Score = 35.0 bits (79), Expect = 0.12
 Identities = 30/86 (34%), Positives = 32/86 (37%), Gaps = 2/86 (2%)
 Frame = +1

Query: 223 PCHRPWGRGARPWAAHGTAPMAASARCTVRGQRAR*GPPRHAIGAHPPHRRGTGS--PSP 396
           P  RP G G RP    G  P    A     GQR+  G PR   G     R G GS  P P
Sbjct: 199 PGPRPGGGGPRP----GGGPRPGGAPRPQGGQRS--GAPRDGQGGPRGQRPGPGSGGPRP 252

Query: 397 AGSNPTFRTRRSCPCAGSRAPPAASP 474
            G N      +     G R  PA  P
Sbjct: 253 QGGNAAGAASQERQGGGRRPSPAMMP 278

to top

>GLIS3_MOUSE (Q6XP49) Zinc finger protein GLIS3 (GLI-similar 3)|
          Length = 780

 Score = 34.7 bits (78), Expect = 0.16
 Identities = 31/90 (34%), Positives = 38/90 (42%), Gaps = 4/90 (4%)
 Frame = +1

Query: 217 HPPCHRPW-GRGARPWAAHGTAPMAASARCTVRGQRAR*GPPRHAIGAHPPHRRGTGSP- 390
           H   H P  G G  P A   +AP+ AS   T  G  A  GPP H +    P     GSP 
Sbjct: 539 HTVGHSPGPGPGPGPGAELYSAPIFASNHSTRSGTAAGAGPPPHPVSHPSPGHNVQGSPH 598

Query: 391 SPAGSNPTFRTRRSCPCAGSR--APPAASP 474
           +P+   P      +   AG+   APP  SP
Sbjct: 599 NPSSQLPPL----TAVDAGAERFAPPTPSP 624

to top

>EXTN_TOBAC (P13983) Extensin precursor (Cell wall hydroxyproline-rich|
           glycoprotein)
          Length = 620

 Score = 33.5 bits (75), Expect = 0.35
 Identities = 27/91 (29%), Positives = 32/91 (35%), Gaps = 3/91 (3%)
 Frame = +1

Query: 211 G*HPPCHRPWGRGARPWAAHGTAPMAASAR---CTVRGQRAR*GPPRHAIGAHPPHRRGT 381
           G HPP HR       P + HG  P    A+     +     +  PP       P H + T
Sbjct: 160 GQHPPSHRR----PSPPSRHGHPPPPTYAQPPPTPIYSPSPQVQPPPTYSPPPPTHVQPT 215

Query: 382 GSPSPAGSNPTFRTRRSCPCAGSRAPPAASP 474
            SP   G  P   T R  P     APP   P
Sbjct: 216 PSPPSRGHQPQPPTHRHAPPTHRHAPPTHQP 246

to top

>ACDA2_METKA (Q8TXF5) Putative acetyl-CoA decarbonylase/synthase complex alpha|
           subunit-like
          Length = 632

 Score = 33.5 bits (75), Expect = 0.35
 Identities = 23/58 (39%), Positives = 25/58 (43%), Gaps = 6/58 (10%)
 Frame = +1

Query: 283 MAASARCTVRGQRAR*GPPRHAIGAHPPHR------RGTGSPSPAGSNPTFRTRRSCP 438
           +AA A   V G R R  PPR A    PP R      R  G P  AG+ P      SCP
Sbjct: 323 IAAWAALRVEGSRDRREPPRRAFRVGPPTRLTDVVIRNVGVPVVAGNIPGIVVLVSCP 380

to top

>PHLB1_MOUSE (Q6PDH0) Pleckstrin homology-like domain family B member 1 (Protein|
           LL5-alpha)
          Length = 1371

 Score = 32.7 bits (73), Expect = 0.60
 Identities = 22/53 (41%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
 Frame = +1

Query: 253 RPWAAHGTAPMAASARCTVRGQRAR*GPPRHAIGAHPPHRRG--TGSPSPAGS 405
           R WAAHGT+P   S     RG+R R   P   +G     R+G  +G  SPA S
Sbjct: 495 RRWAAHGTSPEDFSLTLGARGRRTR--SPSPTLGESLAPRKGSFSGRLSPAYS 545

to top

>PHLB1_HUMAN (Q86UU1) Pleckstrin homology-like domain family B member 1 (Protein|
           LL5-alpha)
          Length = 1377

 Score = 32.3 bits (72), Expect = 0.79
 Identities = 27/91 (29%), Positives = 35/91 (38%), Gaps = 2/91 (2%)
 Frame = +1

Query: 220 PPCHRPWGRGARP--WAAHGTAPMAASARCTVRGQRAR*GPPRHAIGAHPPHRRGTGSPS 393
           P  +R      RP  WAAHG +P   S     RG+R R   P       P     +G  S
Sbjct: 480 PKLNREVAESPRPRRWAAHGASPEDFSLTLGARGRRTRSPSPTLGESLAPHKGSFSGRLS 539

Query: 394 PAGSNPTFRTRRSCPCAGSRAPPAASPCSRK 486
           PA S  +           + A P  SPC ++
Sbjct: 540 PAYSLGSL----------TGASPCQSPCVQR 560

to top

>IF2_STRAW (Q82K53) Translation initiation factor IF-2|
          Length = 1046

 Score = 32.3 bits (72), Expect = 0.79
 Identities = 27/93 (29%), Positives = 36/93 (38%), Gaps = 2/93 (2%)
 Frame = +1

Query: 244 RGARPWAAHGTAPMAASARCTVRGQRAR*GP--PRHAIGAHPPHRRGTGSPSPAGSNPTF 417
           + ARP A    AP  A+A      +R    P  P    G  P  R    +P+PA   P F
Sbjct: 75  QAARPAAPRPPAPKPAAAERPAAAERPAAAPAAPGPRPGPKPAPRPAPAAPAPAA--PEF 132

Query: 418 RTRRSCPCAGSRAPPAASPCSRKVGMRTWGSWP 516
               S P A + A     P +R    +  G+ P
Sbjct: 133 TAPPSAPAAPAAAASGPRPGARPGAPKPGGARP 165

to top

>WASIP_HUMAN (O43516) Wiskott-Aldrich syndrome protein-interacting protein|
           (WASP-interacting protein) (PRPL-2 protein)
          Length = 503

 Score = 32.3 bits (72), Expect = 0.79
 Identities = 31/104 (29%), Positives = 36/104 (34%), Gaps = 10/104 (9%)
 Frame = +1

Query: 193 RATSS*G*HPPCHRPWGRGARPWAAHGTAPMAASARCTVRGQRAR*GPPRHAIGAHPPHR 372
           R   S G  PP   P GR     +A   +P +   R  V     R GPP       PP R
Sbjct: 117 RDNDSGGSRPPLLPPGGRST---SAKPFSPPSGPGRFPVPSPGHRSGPPEPQRNRMPPPR 173

Query: 373 RGTGS-----PSPAGSNP-----TFRTRRSCPCAGSRAPPAASP 474
              GS     P P  S P     +   R S P  G    P+  P
Sbjct: 174 PDVGSKPDSIPPPVPSTPRPIQSSLHNRGSPPVPGGPRQPSPGP 217

to top

>HMCN1_HUMAN (Q96RW7) Hemicentin-1 precursor (Fibulin-6) (FIBL-6)|
          Length = 5635

 Score = 32.3 bits (72), Expect = 0.79
 Identities = 23/65 (35%), Positives = 29/65 (44%), Gaps = 9/65 (13%)
 Frame = -1

Query: 357  CTYGMARRTSSC--PLASHGTSRRGCHG-------CSTMSCPRPGTSSPWPMAWGMSSSG 205
            C  G  +RT  C  P+  +G   R C G       C++  CP  G  SPW   WG  S  
Sbjct: 4716 CGGGARQRTRGCSDPVPQYGG--RKCEGSDVQSDFCNSDPCPTHGNWSPW-SGWGTCS-- 4770

Query: 204  RCCSG 190
            R C+G
Sbjct: 4771 RTCNG 4775

to top

>SRRM1_MOUSE (Q52KI8) Serine/arginine repetitive matrix protein 1|
           (Plenty-of-prolines 101)
          Length = 946

 Score = 32.3 bits (72), Expect = 0.79
 Identities = 19/47 (40%), Positives = 24/47 (51%)
 Frame = +1

Query: 334 PPRHAIGAHPPHRRGTGSPSPAGSNPTFRTRRSCPCAGSRAPPAASP 474
           P R A  + PP RR + SP P   +PT   RRS P   S+    +SP
Sbjct: 640 PKRRASPSPPPKRRVSHSPPPKQRSPTVTKRRS-PSLSSKHRKGSSP 685



 Score = 30.0 bits (66), Expect = 3.9
 Identities = 19/50 (38%), Positives = 22/50 (44%)
 Frame = +1

Query: 334 PPRHAIGAHPPHRRGTGSPSPAGSNPTFRTRRSCPCAGSRAPPAASPCSR 483
           PPR      PP RR T SP P   +P+   RR  P    R  P+  P  R
Sbjct: 585 PPRRRRSPTPPPRRRTPSPPPRRRSPS--PRRYSPPIQRRYSPSPPPKRR 632

to top

>WASL_RAT (O08816) Neural Wiskott-Aldrich syndrome protein (N-WASP)|
          Length = 501

 Score = 32.0 bits (71), Expect = 1.0
 Identities = 17/47 (36%), Positives = 20/47 (42%)
 Frame = +1

Query: 334 PPRHAIGAHPPHRRGTGSPSPAGSNPTFRTRRSCPCAGSRAPPAASP 474
           PP H+ G  PP  RG G+P P  S          P A    PP + P
Sbjct: 289 PPPHSSGPPPPPARGRGAPPPPPSR--------APTAAPPPPPPSRP 327

to top

>WASL_MOUSE (Q91YD9) Neural Wiskott-Aldrich syndrome protein (N-WASP)|
          Length = 501

 Score = 32.0 bits (71), Expect = 1.0
 Identities = 17/47 (36%), Positives = 20/47 (42%)
 Frame = +1

Query: 334 PPRHAIGAHPPHRRGTGSPSPAGSNPTFRTRRSCPCAGSRAPPAASP 474
           PP H+ G  PP  RG G+P P  S          P A    PP + P
Sbjct: 289 PPPHSSGPPPPPARGRGAPPPPPSR--------APTAAPPPPPPSRP 327

to top

>WASL_BOVIN (Q95107) Neural Wiskott-Aldrich syndrome protein (N-WASP)|
          Length = 505

 Score = 32.0 bits (71), Expect = 1.0
 Identities = 17/47 (36%), Positives = 20/47 (42%)
 Frame = +1

Query: 334 PPRHAIGAHPPHRRGTGSPSPAGSNPTFRTRRSCPCAGSRAPPAASP 474
           PP H+ G  PP  RG G+P P  S          P A    PP + P
Sbjct: 292 PPPHSSGPPPPPARGRGAPPPPPSR--------APTAAPPPPPPSRP 330

to top

>ICP0_HHV2H (P28284) Trans-acting transcriptional protein ICP0 (VMW118 protein)|
          Length = 825

 Score = 32.0 bits (71), Expect = 1.0
 Identities = 28/100 (28%), Positives = 38/100 (38%), Gaps = 2/100 (2%)
 Frame = +1

Query: 190 PRATSS*G*HPPCHRPWGRGARPWAAHGT--APMAASARCTVRGQRAR*GPPRHAIGAHP 363
           PR T++ G  P  H   G  ARP    G+   P A+S+  +    R+   P         
Sbjct: 492 PRGTNTPGAAP--HAAEGAAARPRKRRGSDSGPAASSSASSSAAPRSPLAPQGVGAKRAA 549

Query: 364 PHRRGTGSPSPAGSNPTFRTRRSCPCAGSRAPPAASPCSR 483
           P R         G  P        P +   APP+ASP S+
Sbjct: 550 PRRAPDSDSGDRGHGPL------APASAGAAPPSASPSSQ 583

to top

>MUCDL_HUMAN (Q9HBB8) Mucin and cadherin-like protein precursor|
           (Mu-protocadherin)
          Length = 845

 Score = 31.6 bits (70), Expect = 1.3
 Identities = 19/47 (40%), Positives = 21/47 (44%), Gaps = 5/47 (10%)
 Frame = -1

Query: 333 TSSCPLASHGTSRRGCH-----GCSTMSCPRPGTSSPWPMAWGMSSS 208
           TSS P  S G      H     G  T   P+PGTS P P   G S+S
Sbjct: 514 TSSTPGGSPGAENSTSHQPATPGGDTAQTPKPGTSQPMPPGVGTSTS 560

to top

>IF2_DESDG (Q30WJ0) Translation initiation factor IF-2|
          Length = 984

 Score = 31.6 bits (70), Expect = 1.3
 Identities = 30/87 (34%), Positives = 35/87 (40%), Gaps = 25/87 (28%)
 Frame = -2

Query: 506 PHVRI------PTLREQGEAAGGAREP-AQGHDRRVRKVGLEPA--------------GD 390
           P VR+        ++ Q  AA  ARE  A+  DR  R  G  PA              GD
Sbjct: 248 PQVRVISRPDPAAVQAQAAAAAQAREERAERPDRGPRPAGARPAGPRPGGPRQGDSRPGD 307

Query: 389 GEPVPR----R*GGCAPMAWRGGPHRA 321
           G P PR    R GG  P A  G P +A
Sbjct: 308 GRPAPRSGAPRPGGARPAAGFGQPAQA 334

to top

>RPB1_ENCCU (Q8SSC4) DNA-directed RNA polymerase II largest subunit (EC|
           2.7.7.6) (RNA polymerase II subunit 1)
          Length = 1599

 Score = 31.2 bits (69), Expect = 1.8
 Identities = 13/34 (38%), Positives = 15/34 (44%)
 Frame = -1

Query: 288 CHGCSTMSCPRPGTSSPWPMAWGMSSSGRCCSGK 187
           C  CS +  PR G  S     WGMS     C G+
Sbjct: 101 CFYCSKIKIPRKGIKSTLSNVWGMSKGRSVCEGE 134

to top

>PALI_NEUCR (Q7SFN5) pH-response regulator protein palI/rim-9|
          Length = 705

 Score = 31.2 bits (69), Expect = 1.8
 Identities = 26/90 (28%), Positives = 33/90 (36%), Gaps = 1/90 (1%)
 Frame = +1

Query: 241 GRGARPWAAHGTAPMAASARCTVRGQRAR*GPPRHAIGAHPPHRRGTGSPSP-AGSNPTF 417
           GRG  P    G  P         +  R   GPP    G + P  RG G P P  G  P  
Sbjct: 336 GRGGFPGPGRGGGPP--------QNGRGGYGPPGRGRGGYGPPPRGYGGPGPRGGRGPPP 387

Query: 418 RTRRSCPCAGSRAPPAASPCSRKVGMRTWG 507
           +  +  P    R P   +P     G+ T+G
Sbjct: 388 QGYQGGP---DRRPSPGAPYGPGPGVGTYG 414

to top

>XYLF_PSEPU (P23106) 2-hydroxymuconic semialdehyde hydrolase (EC 3.1.1.-)|
           (HMSH)
          Length = 281

 Score = 30.8 bits (68), Expect = 2.3
 Identities = 14/33 (42%), Positives = 18/33 (54%)
 Frame = -3

Query: 346 HGAEDLIVPVGLSRYIAQRLPWVQYHELPTAGH 248
           HG ED I+P+  S  +AQ +P  Q H     GH
Sbjct: 223 HGREDRIIPLQASLTLAQWIPNAQLHVFGQCGH 255

to top

>IF2_DESVH (Q72ER1) Translation initiation factor IF-2|
          Length = 1079

 Score = 30.8 bits (68), Expect = 2.3
 Identities = 30/92 (32%), Positives = 33/92 (35%), Gaps = 1/92 (1%)
 Frame = -2

Query: 482 REQGEAAGGAREPAQGHDRRVRKVGLEPAGDGEP-VPRR*GGCAPMAWRGGPHRARWPLT 306
           RE G   GGA  P  G+    R  G  P G   P  PR  GG  P    GGP        
Sbjct: 324 REGGYRPGGAPRPEGGY----RPGGPRPEGGYRPGAPRPEGGYRPA---GGPRPEGQREG 376

Query: 305 VHRXXXXXXXXXXXAHGRAPLPHGRWHGGCHP 210
            +R             G AP P G+  GG  P
Sbjct: 377 GYRPGAPRPEGGYRPAGGAPRPEGQREGGYRP 408

to top

>RP54_RHISN (P22881) RNA polymerase sigma-54 factor|
          Length = 525

 Score = 30.8 bits (68), Expect = 2.3
 Identities = 14/56 (25%), Positives = 26/56 (46%)
 Frame = +2

Query: 95  KKLKHRSTKNSSTQKTGKHQTTSL*LTLASFFPEQHRPEDDIPHAIGHGEEVPGRG 262
           + + H    +S+T   G+   + L    A+ F +   P+ D P  +G  + +PG G
Sbjct: 79  ESVDHGDLYDSATTSPGERLRSELDADFANVFQDDTAPQRDAPELLGQWKSMPGAG 134

to top

>CJ095_HUMAN (Q9H7T3) Protein C10orf95|
          Length = 257

 Score = 30.8 bits (68), Expect = 2.3
 Identities = 22/68 (32%), Positives = 26/68 (38%)
 Frame = -1

Query: 381 RSPAMRRMCTYGMARRTSSCPLASHGTSRRGCHGCSTMSCPRPGTSSPWPMAWGMSSSGR 202
           R+ A +  C  G A      PL S+ TS  G  G  T   P P  +SP   A       R
Sbjct: 160 RAGACKPSCA-GAAWSARGAPLCSYRTSCAGSCGARTAPTPAPTCASPSAAASSCCRRRR 218

Query: 201 CCSGKNEA 178
            CS    A
Sbjct: 219 ACSSPTTA 226

to top

>WASL_HUMAN (O00401) Neural Wiskott-Aldrich syndrome protein (N-WASP)|
          Length = 505

 Score = 30.8 bits (68), Expect = 2.3
 Identities = 17/47 (36%), Positives = 19/47 (40%)
 Frame = +1

Query: 334 PPRHAIGAHPPHRRGTGSPSPAGSNPTFRTRRSCPCAGSRAPPAASP 474
           PP H  G  PP  RG G+P P  S          P A    PP + P
Sbjct: 292 PPPHNSGPPPPPARGRGAPPPPPSR--------APTAAPPPPPPSRP 330

to top

>SRRM1_HUMAN (Q8IYB3) Serine/arginine repetitive matrix protein 1|
           (Ser/Arg-related nuclear matrix protein) (SR-related
           nuclear matrix protein of 160 kDa) (SRm160)
          Length = 904

 Score = 30.4 bits (67), Expect = 3.0
 Identities = 22/75 (29%), Positives = 29/75 (38%), Gaps = 6/75 (8%)
 Frame = +1

Query: 256 PWAAHGTAPMAASARCTVRGQRAR*GPP------RHAIGAHPPHRRGTGSPSPAGSNPTF 417
           P  +   +P       + RG+R R   P      R    A PP RR T +P P    P+ 
Sbjct: 525 PSRSASPSPRKRQKETSPRGRRRRSPSPPPTRRRRSPSPAPPPRRRRTPTPPPRRRTPSP 584

Query: 418 RTRRSCPCAGSRAPP 462
             RR  P     +PP
Sbjct: 585 PPRRRSPSPRRYSPP 599

to top

>DPY10_CAEEL (P35800) Cuticle collagen dpy-10 precursor (Protein dumpy-10)|
          Length = 356

 Score = 30.4 bits (67), Expect = 3.0
 Identities = 19/67 (28%), Positives = 28/67 (41%), Gaps = 5/67 (7%)
 Frame = +1

Query: 331 GPPRHAIGAHPPHRRG----TGSPSPAGSNPTFRTRRSCPCAGSRAPPAASPCSR-KVGM 495
           GPP     +  P + G     G P   G+ P     ++CP    R PP   PC +   G+
Sbjct: 128 GPPGPRGSSGTPGKPGLPGNAGKPGMPGTTPN----QTCPLNQVREPPPCRPCPKGPPGI 183

Query: 496 RTWGSWP 516
           + W  +P
Sbjct: 184 KGWPGFP 190

to top

>COGA1_HUMAN (Q07092) Collagen alpha-1(XVI) chain precursor|
          Length = 1603

 Score = 30.4 bits (67), Expect = 3.0
 Identities = 20/62 (32%), Positives = 22/62 (35%)
 Frame = +1

Query: 217  HPPCHRPWGRGARPWAAHGTAPMAASARCTVRGQRAR*GPPRHAIGAHPPHRRGTGSPSP 396
            HP    P G   +P     T    A       G + R GPP H     PP     G P P
Sbjct: 1249 HPGLPGPKGDCGKPGPPGSTGRPGAEGEPGAMGPQGRPGPPGHVGPPGPP-----GQPGP 1303

Query: 397  AG 402
            AG
Sbjct: 1304 AG 1305

to top

>DIDO1_HUMAN (Q9BTC0) Death-inducer obliterator 1 (DIO-1) (Death-associated|
            transcription factor 1) (DATF-1) (hDido1)
          Length = 2240

 Score = 30.4 bits (67), Expect = 3.0
 Identities = 26/79 (32%), Positives = 31/79 (39%), Gaps = 6/79 (7%)
 Frame = +1

Query: 250  ARPWAAHGTAPM------AASARCTVRGQRAR*GPPRHAIGAHPPHRRGTGSPSPAGSNP 411
            ARP    GTAP+         ++   +GQR    P  HA+G    H  G   P P G  P
Sbjct: 1727 ARP--GEGTAPLPPPGQKVGGSQPPFQGQRE---PGPHALGMSGLH--GPNFPGPRGPAP 1779

Query: 412  TFRTRRSCPCAGSRAPPAA 468
             F         G R PP A
Sbjct: 1780 PFPEENIASNDGPRGPPPA 1798

to top

>RGL2_MOUSE (Q61193) Ral guanine nucleotide dissociation stimulator-like 2|
           (RalGDS-like factor) (RAS-associated protein RAB2L)
          Length = 778

 Score = 30.4 bits (67), Expect = 3.0
 Identities = 16/48 (33%), Positives = 19/48 (39%)
 Frame = +1

Query: 334 PPRHAIGAHPPHRRGTGSPSPAGSNPTFRTRRSCPCAGSRAPPAASPC 477
           PP  +      HRR     SP   N    T RS  C G  + P +S C
Sbjct: 603 PPASSPRPSRGHRRSASCGSPLSGNTGEGTSRSAGCGGGVSGPGSSDC 650

to top

>POL_SIVMK (P05897) Pol polyprotein [Contains: Protease (Retropepsin) (EC|
           3.4.23.-); Reverse transcriptase/ribonuclease H (EC
           2.7.7.49) (EC 3.1.26.4) (RT); Integrase (IN)]
          Length = 1054

 Score = 30.4 bits (67), Expect = 3.0
 Identities = 15/42 (35%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
 Frame = +1

Query: 232 RPWGRGAR-PWAAHGTAPMAASARCTVRGQRAR*GPPRHAIG 354
           RPW  G   P   HG++   A A C+ RG         HA+G
Sbjct: 44  RPWSMGKEAPQFPHGSSASGADANCSPRGPSCGSAKELHAVG 85

to top

>GCSH_TROWT (P64215) Glycine cleavage system H protein|
          Length = 121

 Score = 30.0 bits (66), Expect = 3.9
 Identities = 16/57 (28%), Positives = 31/57 (54%), Gaps = 5/57 (8%)
 Frame = -3

Query: 370 DEADV-----HLWHGAEDLIVPVGLSRYIAQRLPWVQYHELPTAGHLFPMADGMGDV 215
           DE+D+     H W   +D I  VG+++Y  ++L  + Y +LP+   L    + +G++
Sbjct: 3   DESDLVYSKEHEWVFIDDDIAWVGITKYAVKKLGDIVYIDLPSQDALIVQGECVGEI 59

to top

>GCSH_TROW8 (P64216) Glycine cleavage system H protein|
          Length = 121

 Score = 30.0 bits (66), Expect = 3.9
 Identities = 16/57 (28%), Positives = 31/57 (54%), Gaps = 5/57 (8%)
 Frame = -3

Query: 370 DEADV-----HLWHGAEDLIVPVGLSRYIAQRLPWVQYHELPTAGHLFPMADGMGDV 215
           DE+D+     H W   +D I  VG+++Y  ++L  + Y +LP+   L    + +G++
Sbjct: 3   DESDLVYSKEHEWVFIDDDIAWVGITKYAVKKLGDIVYIDLPSQDALIVQGECVGEI 59

to top

>DISS_TRIJE (Q7ZZM2) Disintegrin jerdostatin precursor|
          Length = 110

 Score = 30.0 bits (66), Expect = 3.9
 Identities = 17/43 (39%), Positives = 20/43 (46%), Gaps = 7/43 (16%)
 Frame = +3

Query: 276 CTHGSLCAMYRERPTGT--MRSSAPCHRCTSASS-----PGNG 383
           CT G  C   + +P GT   R+S   H CT  S      PGNG
Sbjct: 68  CTTGPCCRQCKLKPAGTTCWRTSVSSHYCTGRSCECPSYPGNG 110

to top

>GCSH_STRAW (Q82JI1) Glycine cleavage system H protein|
          Length = 125

 Score = 30.0 bits (66), Expect = 3.9
 Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
 Frame = -3

Query: 391 MENPFPGDEADVHLW-HGAEDLIVPVGLSRYIAQRLPWVQYHELPTAGHLFPMADGMGDV 215
           M NP     +  H W  GAED +  VG++ + A  L  V Y +LP  G      +  G++
Sbjct: 1   MSNPQQLRYSKEHEWLSGAEDGVSTVGITEHAANALGDVVYVQLPEVGDTVTAGETCGEL 60

to top

>BIOH_AZOSE (Q5NZF6) Carboxylesterase bioH (EC 3.1.1.1) (Biotin synthesis|
           protein bioH)
          Length = 250

 Score = 30.0 bits (66), Expect = 3.9
 Identities = 13/37 (35%), Positives = 20/37 (54%)
 Frame = -3

Query: 358 VHLWHGAEDLIVPVGLSRYIAQRLPWVQYHELPTAGH 248
           V L HGA D ++P+  + ++A RLP  +       GH
Sbjct: 194 VQLIHGAGDALMPLAAAEWLATRLPDARLARFDDCGH 230

to top

>LRC25_MOUSE (Q8K1T1) Leucine-rich repeat-containing protein 25 precursor|
           (Monocyte and plasmacytoid-activated protein)
          Length = 297

 Score = 30.0 bits (66), Expect = 3.9
 Identities = 18/63 (28%), Positives = 26/63 (41%), Gaps = 10/63 (15%)
 Frame = -1

Query: 327 SCPLASHGTSRRGCHGCSTMSCPRPGTSSP----------WPMAWGMSSSGRCCSGKNEA 178
           SC LAS    R+ C G   + C  P T +P           P +WG  + G   +G    
Sbjct: 121 SCGLASWYALRQNCSGQQQLLCLHPATEAPRNLSTFLQVSCPPSWGPGTIGALVAGTISL 180

Query: 177 SVS 169
           +V+
Sbjct: 181 AVA 183

to top

>MYSC_ACACA (P10569) Myosin IC heavy chain|
          Length = 1168

 Score = 30.0 bits (66), Expect = 3.9
 Identities = 24/76 (31%), Positives = 28/76 (36%)
 Frame = +1

Query: 235  PWGRGARPWAAHGTAPMAASARCTVRGQRAR*GPPRHAIGAHPPHRRGTGSPSPAGSNPT 414
            P G+  R     G  PM         G      PP  A  A PP  RG   P+P G+ P 
Sbjct: 1052 PGGKSGRAAPMGGPGPMRGRGGPAPGGPGRGGAPPPGAGRAGPPGGRG--MPAPGGAAP- 1108

Query: 415  FRTRRSCPCAGSRAPP 462
                R  P  G+  PP
Sbjct: 1109 --RGRGAPPPGAGGPP 1122

to top

>DAZP1_HUMAN (Q96EP5) DAZ-associated protein 1 (Deleted in|
           azoospermia-associated protein 1)
          Length = 407

 Score = 29.6 bits (65), Expect = 5.1
 Identities = 27/95 (28%), Positives = 33/95 (34%)
 Frame = +1

Query: 190 PRATSS*G*HPPCHRPWGRGARPWAAHGTAPMAASARCTVRGQRAR*GPPRHAIGAHPPH 369
           PR + S     P    WG    P AA+G A           G +    P   AIG + P 
Sbjct: 190 PRDSKSQAPGQPGASQWGSRVVPNAANGWAGQPPPTWQQGYGPQGMWVPAGQAIGGYGPP 249

Query: 370 RRGTGSPSPAGSNPTFRTRRSCPCAGSRAPPAASP 474
             G G+P P    P F +       G   PP   P
Sbjct: 250 PAGRGAPPPP---PPFTSYIVSTPPGGFPPPQGFP 281

to top

>MUTL_TREPA (O83325) DNA mismatch repair protein mutL|
          Length = 620

 Score = 29.6 bits (65), Expect = 5.1
 Identities = 17/46 (36%), Positives = 21/46 (45%)
 Frame = +1

Query: 343 HAIGAHPPHRRGTGSPSPAGSNPTFRTRRSCPCAGSRAPPAASPCS 480
           H + A P H   T   +P  S+P        PC G R  PAA PC+
Sbjct: 351 HYVRAEPAHAPATQGNAPTHSSP--------PCTGVREEPAA-PCA 387

to top

>GCSH_CAUCR (Q9A352) Glycine cleavage system H protein|
          Length = 121

 Score = 29.6 bits (65), Expect = 5.1
 Identities = 15/47 (31%), Positives = 24/47 (51%)
 Frame = -3

Query: 355 HLWHGAEDLIVPVGLSRYIAQRLPWVQYHELPTAGHLFPMADGMGDV 215
           H W   E  +  VG++ Y A++L  V + E P AG +    +G+  V
Sbjct: 7   HEWVIVEGDVATVGITAYAAEQLGDVVFVETPEAGKVVKQGEGLAVV 53

to top

>DAZP1_MOUSE (Q9JII5) DAZ-associated protein 1 (Deleted in|
           azoospermia-associated protein 1)
          Length = 406

 Score = 29.6 bits (65), Expect = 5.1
 Identities = 26/95 (27%), Positives = 33/95 (34%)
 Frame = +1

Query: 190 PRATSS*G*HPPCHRPWGRGARPWAAHGTAPMAASARCTVRGQRAR*GPPRHAIGAHPPH 369
           PR + +     P    WG    P AA+G A           G +    P   AIG + P 
Sbjct: 190 PRDSKNQAPGQPGASQWGSRVAPSAANGWAGQPPPTWQQGYGPQGMWVPAGQAIGGYGPP 249

Query: 370 RRGTGSPSPAGSNPTFRTRRSCPCAGSRAPPAASP 474
             G G+P P    P F +       G   PP   P
Sbjct: 250 PAGRGAPPPP---PPFTSYIVSTPPGGFPPPQGFP 281

to top

>SF01_HUMAN (Q15637) Splicing factor 1 (Zinc finger protein 162) (Transcription|
           factor ZFM1) (Zinc finger gene in MEN1 locus) (Mammalian
           branch point-binding protein mBBP) (BBP)
          Length = 639

 Score = 29.6 bits (65), Expect = 5.1
 Identities = 24/91 (26%), Positives = 36/91 (39%), Gaps = 1/91 (1%)
 Frame = +1

Query: 211 G*HPPCHRPWGRGARPWAAH-GTAPMAASARCTVRGQRAR*GPPRHAIGAHPPHRRGTGS 387
           G HPP H     G  P   + G+ P+ +      +G+     PP   +   PP   G   
Sbjct: 435 GPHPPGHH----GPPPMDQYLGSTPVGSGVYRLHQGKGMMPPPPMGMMPPPPPPPSGQPP 490

Query: 388 PSPAGSNPTFRTRRSCPCAGSRAPPAASPCS 480
           P P+G  P ++ ++  P      PP   P S
Sbjct: 491 PPPSGPLPPWQQQQQQP------PPPPPPSS 515

to top

>BIOH_NITEU (Q82SL8) Carboxylesterase bioH (EC 3.1.1.1) (Biotin synthesis|
           protein bioH)
          Length = 252

 Score = 29.6 bits (65), Expect = 5.1
 Identities = 14/37 (37%), Positives = 19/37 (51%)
 Frame = -3

Query: 358 VHLWHGAEDLIVPVGLSRYIAQRLPWVQYHELPTAGH 248
           V L HG  D+I P G + ++ Q LP  +    P  GH
Sbjct: 199 VLLIHGRNDVITPAGAADWMQQHLPRARLVLFPHCGH 235

to top

>TPT_SPIOL (P11869) Triose phosphate/phosphate translocator, chloroplast|
           precursor (cTPT) (p36) (E29)
          Length = 404

 Score = 29.6 bits (65), Expect = 5.1
 Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 7/59 (11%)
 Frame = -3

Query: 346 HGAEDLIVPVGLSRYIAQRLPWV-----QYHELP--TAGHLFPMADGMGDVILRTMLLG 191
           HG  D I  VGL+++I+  L WV      Y++L   T   + P+   +G+V+ R  ++G
Sbjct: 302 HGFNDAIAKVGLTKFISD-LFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIG 359

to top

>SF01_MOUSE (Q64213) Splicing factor 1 (Zinc finger protein 162) (Transcription|
           factor ZFM1) (mZFM) (Zinc finger gene in MEN1 locus)
           (Mammalian branch point-binding protein mBBP) (BBP)
           (CW17)
          Length = 653

 Score = 29.6 bits (65), Expect = 5.1
 Identities = 24/91 (26%), Positives = 36/91 (39%), Gaps = 1/91 (1%)
 Frame = +1

Query: 211 G*HPPCHRPWGRGARPWAAH-GTAPMAASARCTVRGQRAR*GPPRHAIGAHPPHRRGTGS 387
           G HPP H     G  P   + G+ P+ +      +G+     PP   +   PP   G   
Sbjct: 435 GPHPPGHH----GPPPMDQYLGSTPVGSGVYRLHQGKGMMPPPPMGMMPPPPPPPSGQPP 490

Query: 388 PSPAGSNPTFRTRRSCPCAGSRAPPAASPCS 480
           P P+G  P ++ ++  P      PP   P S
Sbjct: 491 PPPSGPLPPWQQQQQQP------PPPPPPSS 515

to top

>LYPD5_MOUSE (Q9D7Z7) Ly6/PLAUR domain-containing protein 5 precursor|
          Length = 256

 Score = 29.6 bits (65), Expect = 5.1
 Identities = 16/39 (41%), Positives = 19/39 (48%), Gaps = 2/39 (5%)
 Frame = -1

Query: 279 CSTMSCPRPGTSSPWPMAWGMSSSGRCCSGK--NEASVS 169
           C   SC   GT+SPW     +   G CC G   N ASV+
Sbjct: 182 CHRPSCTTMGTTSPWT---SIDLQGYCCEGHLCNRASVT 217

to top

>TPT_FLAPR (P49131) Triose phosphate/phosphate translocator, chloroplast|
           precursor (cTPT)
          Length = 408

 Score = 29.6 bits (65), Expect = 5.1
 Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 7/61 (11%)
 Frame = -3

Query: 352 LWHGAEDLIVPVGLSRYIAQRLPWVQ--YH-----ELPTAGHLFPMADGMGDVILRTMLL 194
           L HG  D I  VG++++I+  L WV   YH      + T   + P+   +G+V+ R  ++
Sbjct: 304 LKHGFSDAIAKVGMTKFISD-LFWVGMFYHLYNQLAINTLERVAPLTHAVGNVLKRVFVI 362

Query: 193 G 191
           G
Sbjct: 363 G 363

to top

>PIP_MYCPN (P75092) Putative proline iminopeptidase (EC 3.4.11.5) (PIP)|
           (Prolyl aminopeptidase) (PAP)
          Length = 309

 Score = 29.6 bits (65), Expect = 5.1
 Identities = 15/48 (31%), Positives = 24/48 (50%)
 Frame = -3

Query: 391 MENPFPGDEADVHLWHGAEDLIVPVGLSRYIAQRLPWVQYHELPTAGH 248
           +EN     +  VHL HG  DL+ P+  +  + + LP +  +    AGH
Sbjct: 243 LENVAVLKDKPVHLIHGRFDLVCPLSQALELKRALPTLNLYVTNNAGH 290

to top

>CVP5_PIMHY (Q8T0W1) Cysteine-rich venom protein 5 precursor|
          Length = 115

 Score = 29.6 bits (65), Expect = 5.1
 Identities = 25/60 (41%), Positives = 25/60 (41%), Gaps = 7/60 (11%)
 Frame = +1

Query: 301 CTVRGQR--AR*GPPRHAIGAHP-----PHRRGTGSPSPAGSNPTFRTRRSCPCAGSRAP 459
           C V   R  AR GPP   I   P     P RR  G      S PT RTRR  P   SR P
Sbjct: 44  CNVHTLRCEARIGPP---INTQPTRRTQPTRRTRGPKVTRSSRPTNRTRRPKPTNRSRRP 100

to top

>GRPE_STRCO (Q05562) Protein grpE (HSP-70 cofactor)|
          Length = 225

 Score = 29.6 bits (65), Expect = 5.1
 Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
 Frame = -2

Query: 482 REQGEAAGGAREPAQGHDRRVRKVGLEPAG-DGEP 381
           RE GE  GG +  A+  +  V K+GL+  G +GEP
Sbjct: 107 REHGELVGGFKSVAESLETTVAKLGLQQFGKEGEP 141

to top

>TPT1_BRAOB (P52177) Triose phosphate/phosphate translocator, chloroplast|
           precursor (cTPT)
          Length = 407

 Score = 29.3 bits (64), Expect = 6.7
 Identities = 19/61 (31%), Positives = 33/61 (54%), Gaps = 7/61 (11%)
 Frame = -3

Query: 352 LWHGAEDLIVPVGLSRYIAQRLPWV-----QYHELP--TAGHLFPMADGMGDVILRTMLL 194
           L HG  D I  VG++++I+  L WV      Y++L   T   + P+   +G+V+ R  ++
Sbjct: 303 LKHGFNDAIAKVGMTKFISD-LFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVI 361

Query: 193 G 191
           G
Sbjct: 362 G 362

to top

>CO3A1_HUMAN (P02461) Collagen alpha-1(III) chain precursor|
          Length = 1466

 Score = 29.3 bits (64), Expect = 6.7
 Identities = 23/82 (28%), Positives = 29/82 (35%), Gaps = 1/82 (1%)
 Frame = +1

Query: 256 PWAAHGTAPMAASARCTVRGQRAR*GPPRHAIGAHPPHRRG-TGSPSPAGSNPTFRTRRS 432
           P A     P  +       GQR   GP  HA    PP   G  GSP   G         +
Sbjct: 347 PGAKGEVGPAGSPGSNGAPGQRGEPGPQGHAGAQGPPGPPGINGSPGGKGEMGPAGIPGA 406

Query: 433 CPCAGSRAPPAASPCSRKVGMR 498
               G+R PP  +  +   G+R
Sbjct: 407 PGLMGARGPPGPAGANGAPGLR 428

to top

>FA13C_HUMAN (Q8NE31) Protein FAM13C1|
          Length = 585

 Score = 29.3 bits (64), Expect = 6.7
 Identities = 16/52 (30%), Positives = 22/52 (42%)
 Frame = +1

Query: 331 GPPRHAIGAHPPHRRGTGSPSPAGSNPTFRTRRSCPCAGSRAPPAASPCSRK 486
           GPPR+ +   P   R  G P  AG  P+         +G   P AA  C ++
Sbjct: 357 GPPRNLLCEQPTVPRENGKPEAAGPEPS--------SSGEETPDAALTCLKE 400

to top

>DHYS_AERPE (Q9YE72) Probable deoxyhypusine synthase (EC 2.5.1.46) (DHS)|
          Length = 292

 Score = 29.3 bits (64), Expect = 6.7
 Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 3/41 (7%)
 Frame = -2

Query: 221 GCHPQDDVARGKMKRVLARVMLSG---AFLSSVCYCFLCSC 108
           G HP++ V+ GK+K    RV++ G     L  + YC L  C
Sbjct: 251 GAHPREAVSWGKIKESSRRVVVYGDATITLPVIAYCLLHGC 291

to top

>SRRM1_PONPY (Q5R5Q2) Serine/arginine repetitive matrix protein 1|
          Length = 917

 Score = 29.3 bits (64), Expect = 6.7
 Identities = 19/50 (38%), Positives = 22/50 (44%)
 Frame = +1

Query: 334 PPRHAIGAHPPHRRGTGSPSPAGSNPTFRTRRSCPCAGSRAPPAASPCSR 483
           PPR      PP RR T SP P   +P+   RR  P    R  P+  P  R
Sbjct: 580 PPRRRRTPTPPPRRRTPSPPPRRRSPS--PRRYSPPIQRRYSPSPPPKRR 627

to top

>SRRM1_CHICK (Q5ZMJ9) Serine/arginine repetitive matrix protein 1|
          Length = 888

 Score = 28.9 bits (63), Expect = 8.7
 Identities = 22/65 (33%), Positives = 26/65 (40%), Gaps = 14/65 (21%)
 Frame = +1

Query: 334 PPRHAIGAHPPHRRGTGSPSPAGSN--------------PTFRTRRSCPCAGSRAPPAAS 471
           PPRH     P  RR   S S +GS+              P  RT  S P    R  P+AS
Sbjct: 331 PPRHRRSRSPVRRRRRSSASLSGSSSSSSSSRSRSPPKKPPKRTVSSPPRKTRRLSPSAS 390

Query: 472 PCSRK 486
           P  R+
Sbjct: 391 PPRRR 395

to top

>RPB1_SCHPO (P36594) DNA-directed RNA polymerase II largest subunit (EC|
           2.7.7.6) (RNA polymerase II subunit 1)
          Length = 1752

 Score = 28.9 bits (63), Expect = 8.7
 Identities = 11/17 (64%), Positives = 12/17 (70%)
 Frame = +1

Query: 463 AASPCSRKVGMRTWGSW 513
           AA P  RK G+R WGSW
Sbjct: 177 AAQPTIRKDGLRLWGSW 193

to top

>NIFA_AZOBR (P30667) Nif-specific regulatory protein|
          Length = 625

 Score = 28.9 bits (63), Expect = 8.7
 Identities = 31/91 (34%), Positives = 34/91 (37%), Gaps = 9/91 (9%)
 Frame = +1

Query: 235 PWGRGARPWAAHGTAPMAASA-------RCTVRGQRAR*GPPRHAIGAHPPHRRGTGSPS 393
           P GR   P AA+     A  A           RG+ AR   PR   G       G+G P 
Sbjct: 483 PPGRPGGPAAANAPKTPAMPAPVPEPAGAAAARGRPARRVVPRPLAGLRRRPAGGSGPPD 542

Query: 394 PAGSNPTFRTRRSCPCAGSRA--PPAASPCS 480
           PA           CPC  SRA  PP A P S
Sbjct: 543 PA-----------CPCP-SRAPLPPQAPPPS 561

to top

>IE63_HHV2H (P28276) Transcriptional regulator IE63 (VMW63) (ICP27)|
          Length = 512

 Score = 28.9 bits (63), Expect = 8.7
 Identities = 26/78 (33%), Positives = 33/78 (42%), Gaps = 8/78 (10%)
 Frame = +1

Query: 259 WAAHGTAPMAASARCTVRGQRAR*GPPR----HAIGAHPPHRRGTGSPSPAGSN----PT 414
           W+  GT   +AS R    G+ AR  PP     H  G     RRG G   P G++    P 
Sbjct: 105 WSRLGTR-RSASPREPHGGKVARIQPPSTKAPHPRGGRRGRRRGRGRYGPGGADSTPKPR 163

Query: 415 FRTRRSCPCAGSRAPPAA 468
            R  R+    G R P +A
Sbjct: 164 RRVSRNAHNQGGRHPASA 181

to top

>SPL1_ARATH (Q9SMX9) Squamosa promoter-binding-like protein 1|
          Length = 881

 Score = 28.9 bits (63), Expect = 8.7
 Identities = 14/39 (35%), Positives = 18/39 (46%)
 Frame = -2

Query: 497 RIPTLREQGEAAGGAREPAQGHDRRVRKVGLEPAGDGEP 381
           R   L+E  E     R    GH++R RK   EP  +G P
Sbjct: 152 RFHLLQEFDEGKRSCRRRLAGHNKRRRKTNPEPGANGNP 190

to top

>SFPQ_HUMAN (P23246) Splicing factor, proline- and glutamine-rich|
           (Polypyrimidine tract-binding protein-associated
           splicing factor) (PTB-associated splicing factor) (PSF)
           (DNA-binding p52/p100 complex, 100 kDa subunit) (100-kDa
           DNA-pairing protein) (hPOMp
          Length = 707

 Score = 28.9 bits (63), Expect = 8.7
 Identities = 20/58 (34%), Positives = 24/58 (41%), Gaps = 9/58 (15%)
 Frame = +1

Query: 334 PPRHAIGAHP-PHRRGTGSPSPAGSNPTFRTR--------RSCPCAGSRAPPAASPCS 480
           PP H    HP PH++    P P  S+     +         S P A S APPA  P S
Sbjct: 82  PPPHQPPPHPQPHQQQQPPPPPQDSSKPVVAQGPGPAPGVGSAPPASSSAPPATPPTS 139

to top

>TOR2X_HUMAN (Q8N2E6) Prosalusin precursor (Torsin-2A) (Torsin family 2 member|
           A) [Contains: Salusin-alpha; Salusin-beta]
          Length = 242

 Score = 28.9 bits (63), Expect = 8.7
 Identities = 12/29 (41%), Positives = 15/29 (51%)
 Frame = +1

Query: 352 GAHPPHRRGTGSPSPAGSNPTFRTRRSCP 438
           G  PP R G   P+PA   P  R +R+ P
Sbjct: 207 GRAPPRRSGALPPAPAAPRPALRAQRAGP 235

to top

>CR1KA_BACTM (Q45715) Pesticidal crystal protein cry1Ka (Insecticidal|
           delta-endotoxin CryIK(a)) (Crystaline entomocidal
           protoxin) (137 kDa crystal protein)
          Length = 1215

 Score = 28.9 bits (63), Expect = 8.7
 Identities = 12/19 (63%), Positives = 14/19 (73%)
 Frame = -1

Query: 255 PGTSSPWPMAWGMSSSGRC 199
           PGT SPWP + G+  SGRC
Sbjct: 807 PGTESPWPSS-GVYPSGRC 824

to top

>KIFC2_HUMAN (Q96AC6) Kinesin-like protein KIFC2|
          Length = 838

 Score = 28.9 bits (63), Expect = 8.7
 Identities = 21/57 (36%), Positives = 24/57 (42%), Gaps = 3/57 (5%)
 Frame = +1

Query: 301 CTVRGQRAR*GPPRHAIGAHPPHRRGTGSPSPAGSNPTFRTRRSC---PCAGSRAPP 462
           C  R    R  PP       P  RR +G  S   S+PT   + S      AGSRAPP
Sbjct: 715 CACRSPPTRARPPAPLARRSPRGRRISGRQSAPSSSPTEWVKWSWGQPGAAGSRAPP 771

to top

>ERF1_LYCES (Q84XB3) Ethylene-responsive transcription factor 1|
           (Ethylene-responsive element-binding factor 1) (EREBP-1)
           (ERF1-like protein) (LeERF1)
          Length = 244

 Score = 28.9 bits (63), Expect = 8.7
 Identities = 28/104 (26%), Positives = 37/104 (35%), Gaps = 16/104 (15%)
 Frame = +1

Query: 232 RPWGR-----------GARPW-----AAHGTAPMAASARCTVRGQRAR*GPPRHAIGAHP 363
           RPWG+           GAR W     +A   A     A   +RG +A           + 
Sbjct: 113 RPWGKFAAEIRDPAKNGARVWLGTYESAEEAALAYGKAAFRMRGTKAL---------LNF 163

Query: 364 PHRRGTGSPSPAGSNPTFRTRRSCPCAGSRAPPAASPCSRKVGM 495
           PHR G   P P       R   S   + S A  + SP  R+ G+
Sbjct: 164 PHRIGLNEPEPVRVTVKRRLSESASSSVSSASESGSPKRRRKGV 207

to top

>TAU_SPECI (Q6TS35) Microtubule-associated protein tau|
          Length = 429

 Score = 28.9 bits (63), Expect = 8.7
 Identities = 38/124 (30%), Positives = 48/124 (38%), Gaps = 1/124 (0%)
 Frame = +1

Query: 133 TEDRKAPDNITLANTRFIFPRATSS*G*HPPCHRPWGRGARPWAAHGTAPMAASARCTVR 312
           +EDRKA    +   T+   PR T+     PP  +      R  A    +P          
Sbjct: 123 SEDRKAKGADSKTGTKIATPRGTA-----PPGQKGTANATRIPAKTTPSPKTPPG----T 173

Query: 313 GQRAR*GPPRHAIGAHPPHRRGT-GSPSPAGSNPTFRTRRSCPCAGSRAPPAASPCSRKV 489
           G+ A+ G      G   P   GT GS S   S PT  TR     A  R PP  SP S K 
Sbjct: 174 GEPAKSG---DRSGYSSPGSPGTPGSRSRTPSLPTPPTREPKKVAVVRTPP-KSPSSTKS 229

Query: 490 GMRT 501
            ++T
Sbjct: 230 RLQT 233

to top

>PCNT_HUMAN (O95613) Pericentrin (Pericentrin B) (Kendrin)|
          Length = 3336

 Score = 28.9 bits (63), Expect = 8.7
 Identities = 16/47 (34%), Positives = 21/47 (44%), Gaps = 5/47 (10%)
 Frame = -2

Query: 503  HVRIPTLREQGEAAGGAREPAQG-----HDRRVRKVGLEPAGDGEPV 378
            H R+P    Q    GGA+    G     HD  +  V  +P GD +PV
Sbjct: 1958 HTRVPGAHPQPRMDGGAKAQVTGDVEASHDAALEPVVPDPQGDLQPV 2004

to top

>TPT_SOLTU (P29463) Triose phosphate/phosphate translocator, chloroplast|
           precursor (cTPT) (E29)
          Length = 414

 Score = 28.9 bits (63), Expect = 8.7
 Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 7/61 (11%)
 Frame = -3

Query: 352 LWHGAEDLIVPVGLSRYIAQRLPWVQ--YH-----ELPTAGHLFPMADGMGDVILRTMLL 194
           L HG  D I  VGL++++   L WV   YH        T   + P+   +G+V+ R  ++
Sbjct: 310 LQHGFNDAIAKVGLTKFVTD-LFWVGMFYHLYNQVATNTLERVAPLTHAVGNVLKRVFVI 368

Query: 193 G 191
           G
Sbjct: 369 G 369

to top

>LRP1_CHICK (P98157) Low-density lipoprotein receptor-related protein 1 precursor|
            (LRP) (Alpha-2-macroglobulin receptor) (A2MR)
          Length = 4543

 Score = 28.9 bits (63), Expect = 8.7
 Identities = 19/68 (27%), Positives = 26/68 (38%), Gaps = 6/68 (8%)
 Frame = +3

Query: 228  PSAMGKRCPAVGSSWYCTHGSLCAMYRER------PTGTMRSSAPCHRCTSASSPGNGFS 389
            P   G+RC     S YC +G LC            PTG   S      CT+        +
Sbjct: 4223 PRYNGERCQINQCSDYCQNGGLCTASPSGMPTCRCPTGFTGSRCDQQVCTNYCHNNGSCT 4282

Query: 390  ISSGLQPH 413
            ++ G QP+
Sbjct: 4283 VNQGNQPN 4290

to top

>LAMB3_MOUSE (Q61087) Laminin beta-3 chain precursor (Laminin 5 beta 3) (Kalinin|
           B1 chain)
          Length = 1168

 Score = 28.9 bits (63), Expect = 8.7
 Identities = 12/40 (30%), Positives = 16/40 (40%)
 Frame = +1

Query: 385 SPSPAGSNPTFRTRRSCPCAGSRAPPAASPCSRKVGMRTW 504
           +P+P GS    R    C C  + A P    C+     R W
Sbjct: 260 APNPGGSTTAVRVNNVCVCQHNTAAPNCDRCAPFYNNRPW 299

to top

>HXA2_CHICK (Q08727) Homeobox protein Hox-A2|
          Length = 375

 Score = 28.9 bits (63), Expect = 8.7
 Identities = 21/61 (34%), Positives = 25/61 (40%), Gaps = 12/61 (19%)
 Frame = +1

Query: 331 GPPRHAIGAHPPH--RRGTGSPSPAGSNP----------TFRTRRSCPCAGSRAPPAASP 474
           G PRH+ G  P    R  +GSP PAG+ P              R S P A + A  A   
Sbjct: 63  GHPRHSGGGRPKASPRARSGSPGPAGAPPPPEYPWMKEKKASKRSSLPPASASASAAGPA 122

Query: 475 C 477
           C
Sbjct: 123 C 123


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 80,409,498
Number of Sequences: 219361
Number of extensions: 1849109
Number of successful extensions: 7047
Number of sequences better than 10.0: 74
Number of HSP's better than 10.0 without gapping: 6312
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7018
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3869946934
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

to top

full-length cDNA and EST

Clone Information

BLAST Search Result