ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart23g09
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_001030720.1| Gallus gallus similar to RIKEN cDNA 1300013J... 44 0.36
2emb|AL606645.2|OSJN00079 Oryza sativa genomic DNA, chromosome 4,... 44 0.36
3emb|AJ720238.1| Gallus gallus mRNA for hypothetical protein, clo... 44 0.36
4dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.36
5gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome 44 0.36
6gb|AC156569.3| Mus musculus BAC clone RP23-315K10 from chromosom... 44 0.36
7gb|AC154557.2| Mus musculus BAC clone RP23-425M9 from 17, comple... 44 0.36
8emb|CT030155.10| Mouse DNA sequence from clone RP23-425N11 on ch... 44 0.36
9emb|CT030714.5| Mouse DNA sequence from clone RP23-223P19 on chr... 44 0.36
10ref|NM_191356.1| Oryza sativa (japonica cultivar-group), predic... 42 1.4
11ref|XM_525831.1| PREDICTED: Pan troglodytes lymphoid nuclear pro... 42 1.4
12gb|BT019155.1| Zea mays clone Contig818.F mRNA sequence 42 1.4
13ref|NM_001025108.1| Homo sapiens AF4/FMR2 family, member 3 (AFF3... 42 1.4
14ref|NM_002285.2| Homo sapiens AF4/FMR2 family, member 3 (AFF3), ... 42 1.4
15gb|CP000352.1| Ralstonia metallidurans CH34, complete genome 42 1.4
16emb|AL139081.21| Human DNA sequence from clone RP11-179A7 on chr... 42 1.4
17gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete ... 42 1.4
18gb|CP000088.1| Thermobifida fusca YX, complete genome 42 1.4
19gb|BC036895.1| Homo sapiens AF4/FMR2 family, member 3, mRNA (cDN... 42 1.4
20gb|AC126178.6| Homo sapiens 12 BAC RP11-567C2 (Roswell Park Canc... 42 1.4
21dbj|AK092327.1| Homo sapiens cDNA FLJ35008 fis, clone OCBBF20121... 42 1.4
22gb|AC093373.2| Homo sapiens BAC clone RP13-516J8 from 2, complet... 42 1.4
23gb|AC008517.7| Homo sapiens chromosome 5 clone CTC-458G6, comple... 42 1.4
24emb|BX930079.2| Gallus gallus finished cDNA, clone ChEST593b14 42 1.4
25dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
26dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
27gb|AC018690.5| Homo sapiens BAC clone RP11-527J8 from 2, complet... 42 1.4
28dbj|AP003239.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
29ref|XM_343559.2| PREDICTED: Rattus norvegicus lymphoid nuclear p... 42 1.4
30dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ... 42 1.4
31dbj|AP005904.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
32dbj|AK108127.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.4
33gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete ge... 42 1.4
34gb|U34360.1|HSU34360 Human lymphoid nuclear protein (LAF-4) mRNA... 42 1.4
35ref|XM_550081.1| Oryza sativa (japonica cultivar-group), mRNA 40 5.7
36ref|NM_196911.1| Oryza sativa (japonica cultivar-group) hypothet... 40 5.7
37ref|NM_026415.1| Mus musculus RIKEN cDNA 2310002J15 gene (231000... 40 5.7
38gb|AE017346.1| Cryptococcus neoformans var. neoformans JEC21 chr... 40 5.7
39ref|XM_415475.1| PREDICTED: Gallus gallus similar to prostagland... 40 5.7
40ref|XM_571252.1| Cryptococcus neoformans var. neoformans JEC21 h... 40 5.7
41gb|AC122471.4| Mus musculus BAC clone RP24-322M5 from chromosome... 40 5.7
42gb|AC114737.3| Homo sapiens BAC clone CTD-2192D1 from 7, complet... 40 5.7
43emb|AL590483.32| Human DNA sequence from clone RP11-278H7 on chr... 40 5.7
44ref|XM_499831.1| Yarrowia lipolytica CLIB122, YALI0A07018g predi... 40 5.7
45gb|AC145450.4| Mus musculus strain C57BL/6J clone rp23-430i3, co... 40 5.7
46gb|AC027038.12| Oryza sativa chromosome 10 BAC OSJNBa0071K18 gen... 40 5.7
47emb|AL939108.1|SCO939108 Streptomyces coelicolor A3(2) complete ... 40 5.7
48emb|AL606521.24| Mouse DNA sequence from clone RP23-280J3 on chr... 40 5.7
49dbj|D89547.1| Gallus gallus mRNA for vitellogenin I, complete cds 40 5.7
50gb|AF461326.1| Drosophila malerkotliana malerkotliana hunchback ... 40 5.7
51gb|AF461320.1| Drosophila mimetica hunchback (hb) gene, partial cds 40 5.7
52gb|AF461319.1| Drosophila lucipennis hunchback (hb) gene, partia... 40 5.7
53ref|NM_142761.1| Drosophila melanogaster CG13859-RA (CG13859), mRNA 40 5.7
54gb|AC007550.70| Mus musculus strain 129S6/SvEvTac chromosome 11a... 40 5.7
55emb|CR406830.1| Gallus gallus finished cDNA, clone ChEST736o3 40 5.7
56dbj|AK003658.1| Mus musculus 18-day embryo whole body cDNA, RIKE... 40 5.7
57gb|AC005522.2| Homo sapiens PAC clone RP5-1129E22 from 7, comple... 40 5.7
58dbj|AK009095.1| Mus musculus adult male tongue cDNA, RIKEN full-... 40 5.7
59gb|AE003738.3| Drosophila melanogaster chromosome 3R, section 76... 40 5.7
60emb|BX322566.6| Zebrafish DNA sequence from clone CH211-209B6 in... 40 5.7
61dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.7
62dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.7
63dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.7
64dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.7
65gb|AC009915.5|AC009915 Drosophila melanogaster, chromosome 3R, r... 40 5.7
66gb|AC007472.6|AC007472 Drosophila melanogaster, chromosome 2R, r... 40 5.7
67ref|XM_575082.1| PREDICTED: Rattus norvegicus similar to RIKEN c... 40 5.7
68ref|NM_001004408.1| Gallus gallus vitellogenin I (LOC424547), mRNA 40 5.7
69dbj|AP005885.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.7
70dbj|AP002913.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.7
71dbj|AP005471.2| Oryza sativa (japonica cultivar-group) genomic D... 40 5.7
72gb|AC113286.11| Mus musculus chromosome 1, clone RP23-411P10, co... 40 5.7
73gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, c... 40 5.7
74gb|AE003820.3| Drosophila melanogaster chromosome 2R, section 30... 40 5.7
75gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 40 5.7
76gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 5.7
77emb|AL831797.4|CNS08CAA Oryza sativa chromosome 12, . BAC OSJNBa... 40 5.7
78emb|CR382127.1| Yarrowia lipolytica chromosome A of strain CLIB1... 40 5.7
79emb|AL732309.9| Mouse DNA sequence from clone RP23-132N23 on chr... 40 5.7
80emb|AL591404.4| Mouse DNA sequence from clone RP23-394O9 on chro... 40 5.7
81emb|X15359.1|DVHB Drosophila virilis hunchback (hb) gene for zin... 40 5.7 
>ref|NM_001030720.1| Gallus gallus similar to RIKEN cDNA 1300013J15 (LOC417617), mRNA
          Length = 2591

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 149  ggctgctgctgctgcccttgct 170
            ||||||||||||||||||||||
Sbjct: 2006 ggctgctgctgctgcccttgct 2027
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>emb|AL606645.2|OSJN00079 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0053K19,
             complete sequence
          Length = 187601

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 143   gccatgggctgctgctgctgcc 164
             ||||||||||||||||||||||
Sbjct: 82104 gccatgggctgctgctgctgcc 82125
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>emb|AJ720238.1| Gallus gallus mRNA for hypothetical protein, clone 13e7
          Length = 2591

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 149  ggctgctgctgctgcccttgct 170
            ||||||||||||||||||||||
Sbjct: 2006 ggctgctgctgctgcccttgct 2027
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                      
Query: 143      gccatgggctgctgctgctgcc 164
                ||||||||||||||||||||||
Sbjct: 31748834 gccatgggctgctgctgctgcc 31748855
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>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome
          Length = 3304561

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 291     ccgccgtgcccgaccgcaccct 312
               ||||||||||||||||||||||
Sbjct: 1273091 ccgccgtgcccgaccgcaccct 1273070
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>gb|AC156569.3| Mus musculus BAC clone RP23-315K10 from chromosome 13, complete
             sequence
          Length = 165570

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 150   gctgctgctgctgcccttgctc 171
             ||||||||||||||||||||||
Sbjct: 28594 gctgctgctgctgcccttgctc 28615
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>gb|AC154557.2| Mus musculus BAC clone RP23-425M9 from 17, complete sequence
          Length = 186378

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 141   cagccatgggctgctgctgctg 162
             ||||||||||||||||||||||
Sbjct: 69349 cagccatgggctgctgctgctg 69370
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>emb|CT030155.10| Mouse DNA sequence from clone RP23-425N11 on chromosome 17, complete
              sequence
          Length = 189713

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 141    cagccatgggctgctgctgctg 162
              ||||||||||||||||||||||
Sbjct: 103238 cagccatgggctgctgctgctg 103259
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>emb|CT030714.5| Mouse DNA sequence from clone RP23-223P19 on chromosome 13, complete
              sequence
          Length = 176581

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 150    gctgctgctgctgcccttgctc 171
              ||||||||||||||||||||||
Sbjct: 141891 gctgctgctgctgcccttgctc 141912
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>ref|NM_191356.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 510

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 150 gctgctgctgctgcccttgctcggc 174
           |||||||||||||| ||||||||||
Sbjct: 18  gctgctgctgctgctcttgctcggc 42
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>ref|XM_525831.1| PREDICTED: Pan troglodytes lymphoid nuclear protein related to AF4
           (LOC470450), mRNA
          Length = 3183

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 150 gctgctgctgctgcccttgct 170
           |||||||||||||||||||||
Sbjct: 621 gctgctgctgctgcccttgct 601
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>gb|BT019155.1| Zea mays clone Contig818.F mRNA sequence
          Length = 1093

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 139 cgcagccatgggctgctgctgctgc 163
           |||||||||| ||||||||||||||
Sbjct: 426 cgcagccatgtgctgctgctgctgc 402
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>ref|NM_001025108.1| Homo sapiens AF4/FMR2 family, member 3 (AFF3), transcript variant 2,
            mRNA
          Length = 8136

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 150  gctgctgctgctgcccttgct 170
            |||||||||||||||||||||
Sbjct: 1467 gctgctgctgctgcccttgct 1447
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>ref|NM_002285.2| Homo sapiens AF4/FMR2 family, member 3 (AFF3), transcript variant 1,
            mRNA
          Length = 8153

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 150  gctgctgctgctgcccttgct 170
            |||||||||||||||||||||
Sbjct: 1484 gctgctgctgctgcccttgct 1464
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>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome
          Length = 3928089

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 256    cgccgcctccgcaactggcgcagccgcca 284
              |||||||| ||| ||||||||||||||||
Sbjct: 760091 cgccgcctgcgcgactggcgcagccgcca 760063
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>emb|AL139081.21| Human DNA sequence from clone RP11-179A7 on chromosome 13 Contains
             parts of 2 novel genes and the RFC3 gene for replication
             factor C (activator 1) 3, 38kDa, complete sequence
          Length = 185602

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 143   gccatgggctgctgctgctgc 163
             |||||||||||||||||||||
Sbjct: 94024 gccatgggctgctgctgctgc 94004
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>gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete sequence
          Length = 2726152

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 204    gcagcagcatggcgcgcatgg 224
              |||||||||||||||||||||
Sbjct: 579094 gcagcagcatggcgcgcatgg 579114
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>gb|CP000088.1| Thermobifida fusca YX, complete genome
          Length = 3642249

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 197     cgggagcgcagcagcatggcg 217
               |||||||||||||||||||||
Sbjct: 1869571 cgggagcgcagcagcatggcg 1869591
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>gb|BC036895.1| Homo sapiens AF4/FMR2 family, member 3, mRNA (cDNA clone
            IMAGE:5498133), partial cds
          Length = 2005

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 150  gctgctgctgctgcccttgct 170
            |||||||||||||||||||||
Sbjct: 1429 gctgctgctgctgcccttgct 1409
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>gb|AC126178.6| Homo sapiens 12 BAC RP11-567C2 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 127439

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 150    gctgctgctgctgcccttgct 170
              |||||||||||||||||||||
Sbjct: 115862 gctgctgctgctgcccttgct 115842
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>dbj|AK092327.1| Homo sapiens cDNA FLJ35008 fis, clone OCBBF2012191, highly similar to
            LAF-4 PROTEIN
          Length = 2914

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 150  gctgctgctgctgcccttgct 170
            |||||||||||||||||||||
Sbjct: 1557 gctgctgctgctgcccttgct 1537
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>gb|AC093373.2| Homo sapiens BAC clone RP13-516J8 from 2, complete sequence
          Length = 25368

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 150 gctgctgctgctgcccttgct 170
           |||||||||||||||||||||
Sbjct: 247 gctgctgctgctgcccttgct 267
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>gb|AC008517.7| Homo sapiens chromosome 5 clone CTC-458G6, complete sequence
          Length = 198942

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 68    cattttgtatgcatatggcta 88
             |||||||||||||||||||||
Sbjct: 21860 cattttgtatgcatatggcta 21880
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>emb|BX930079.2| Gallus gallus finished cDNA, clone ChEST593b14
          Length = 865

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 150 gctgctgctgctgcccttgct 170
           |||||||||||||||||||||
Sbjct: 581 gctgctgctgctgcccttgct 561
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 143      gccatgggctgctgctgctgc 163
                |||||||||||||||||||||
Sbjct: 13701930 gccatgggctgctgctgctgc 13701950
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 150      gctgctgctgctgcccttgctcggc 174
                |||||||||||||| ||||||||||
Sbjct: 32140230 gctgctgctgctgctcttgctcggc 32140206



 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 148     gggctgctgctgctgccctt 167
               ||||||||||||||||||||
Sbjct: 2145790 gggctgctgctgctgccctt 2145771
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>gb|AC018690.5| Homo sapiens BAC clone RP11-527J8 from 2, complete sequence
          Length = 233117

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 150    gctgctgctgctgcccttgct 170
              |||||||||||||||||||||
Sbjct: 231364 gctgctgctgctgcccttgct 231384
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>dbj|AP003239.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0403C05
          Length = 151085

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 150   gctgctgctgctgcccttgctcggc 174
             |||||||||||||| ||||||||||
Sbjct: 10983 gctgctgctgctgctcttgctcggc 10959
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>ref|XM_343559.2| PREDICTED: Rattus norvegicus lymphoid nuclear protein related to AF4
            (predicted) (Laf4_predicted), mRNA
          Length = 10512

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 150  gctgctgctgctgcccttgct 170
            |||||||||||||||||||||
Sbjct: 7890 gctgctgctgctgcccttgct 7870
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>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 358     ctcctcctccggcatcatctg 378
               |||||||||||||||||||||
Sbjct: 4870629 ctcctcctccggcatcatctg 4870609
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>dbj|AP005904.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:B1040D06
          Length = 155034

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 143    gccatgggctgctgctgctgc 163
              |||||||||||||||||||||
Sbjct: 100044 gccatgggctgctgctgctgc 100064
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>dbj|AK108127.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-139-D06, full
           insert sequence
          Length = 954

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 150 gctgctgctgctgcccttgctcggc 174
           |||||||||||||| ||||||||||
Sbjct: 123 gctgctgctgctgctcttgctcggc 147
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>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome
          Length = 4751080

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 212     atggcgcgcatggccggcgtc 232
               |||||||||||||||||||||
Sbjct: 2321333 atggcgcgcatggccggcgtc 2321353
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>gb|U34360.1|HSU34360 Human lymphoid nuclear protein (LAF-4) mRNA, complete cds
          Length = 3857

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 150  gctgctgctgctgcccttgct 170
            |||||||||||||||||||||
Sbjct: 1302 gctgctgctgctgcccttgct 1282
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>ref|XM_550081.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 201

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 148 gggctgctgctgctgccctt 167
           ||||||||||||||||||||
Sbjct: 176 gggctgctgctgctgccctt 195
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>ref|NM_196911.1| Oryza sativa (japonica cultivar-group) hypothetical protein
            (OSJNBa0071K18.16), mRNA
          Length = 1941

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 373  catctgcctcgaggtggcgcgttgctgc 400
            |||||||||||| |||||||| ||||||
Sbjct: 1740 catctgcctcgacgtggcgcgctgctgc 1713
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>ref|NM_026415.1| Mus musculus RIKEN cDNA 2310002J15 gene (2310002J15Rik), mRNA
          Length = 776

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 151 ctgctgctgctgcccttgct 170
           ||||||||||||||||||||
Sbjct: 454 ctgctgctgctgcccttgct 473
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>gb|AE017346.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 6, complete
              sequence
          Length = 1438950

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 144    ccatgggctgctgctgctgc 163
              ||||||||||||||||||||
Sbjct: 296077 ccatgggctgctgctgctgc 296058
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>ref|XM_415475.1| PREDICTED: Gallus gallus similar to prostaglandin E synthase isoform
            1; microsomal glutathione S-transferase 1-like 1; tumor
            protein p53 inducible protein 12; p53-induced gene 12;
            p53-induced apoptosis protein 12; glutathione
            S-transferase 1-like 1; MGST1-like 1 ... (LOC417193),
            mRNA
          Length = 1365

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 138  ccgcagccatgggctgctgctgct 161
            ||||||||||| ||||||||||||
Sbjct: 1065 ccgcagccatgtgctgctgctgct 1088
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>ref|XM_571252.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein
           (CNF00930) partial mRNA
          Length = 492

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 144 ccatgggctgctgctgctgc 163
           ||||||||||||||||||||
Sbjct: 82  ccatgggctgctgctgctgc 63
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>gb|AC122471.4| Mus musculus BAC clone RP24-322M5 from chromosome 2, complete sequence
          Length = 206592

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 151   ctgctgctgctgcccttgct 170
             ||||||||||||||||||||
Sbjct: 28577 ctgctgctgctgcccttgct 28596
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>gb|AC114737.3| Homo sapiens BAC clone CTD-2192D1 from 7, complete sequence
          Length = 99227

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 150   gctgctgctgctgcccttgc 169
             ||||||||||||||||||||
Sbjct: 58801 gctgctgctgctgcccttgc 58820
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>emb|AL590483.32| Human DNA sequence from clone RP11-278H7 on chromosome 1 Contains the
             3' end of a novel gene (LOC339529), the ZNF238 gene for
             zinc finger protein 238, a novel gene and a CpG island,
             complete sequence
          Length = 98228

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 144   ccatgggctgctgctgctgc 163
             ||||||||||||||||||||
Sbjct: 60624 ccatgggctgctgctgctgc 60605
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>ref|XM_499831.1| Yarrowia lipolytica CLIB122, YALI0A07018g predicted mRNA
          Length = 3411

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 144  ccatgggctgctgctgctgc 163
            ||||||||||||||||||||
Sbjct: 2701 ccatgggctgctgctgctgc 2682
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>gb|AC145450.4| Mus musculus strain C57BL/6J clone rp23-430i3, complete sequence
          Length = 208207

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 151    ctgctgctgctgcccttgct 170
              ||||||||||||||||||||
Sbjct: 195869 ctgctgctgctgcccttgct 195850
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>gb|AC027038.12| Oryza sativa chromosome 10 BAC OSJNBa0071K18 genomic sequence, complete
             sequence
          Length = 149758

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 373   catctgcctcgaggtggcgcgttgctgc 400
             |||||||||||| |||||||| ||||||
Sbjct: 18704 catctgcctcgacgtggcgcgctgctgc 18677
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>emb|AL939108.1|SCO939108 Streptomyces coelicolor A3(2) complete genome; segment 5/29
          Length = 339650

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 208    cagcatggcgcgcatggccggcgt 231
              ||||||||||||| ||||||||||
Sbjct: 266023 cagcatggcgcgcctggccggcgt 266000
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>emb|AL606521.24| Mouse DNA sequence from clone RP23-280J3 on chromosome 11 Contains the 5'
              end of the Mtmr3 gene for myotubularin related protein 3,
              two novel genes, the gene for a novel protein similar to
              human ASC-1 complex subunit P100, the gene for a novel
              protein similar to human ubiquinol-cytochrome C reductase
              complex 7.2 kDa protein UQCR10, the Cabp7 gene for calcium
              binding protein 7, the 3' end of the Nf2 gene for
              neurofibromatosis 2 and two CpG islands, complete sequence
          Length = 233997

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 149    ggctgctgctgctgcccttg 168
              ||||||||||||||||||||
Sbjct: 153429 ggctgctgctgctgcccttg 153448
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>dbj|D89547.1| Gallus gallus mRNA for vitellogenin I, complete cds
          Length = 5952

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 151  ctgctgctgctgcccttgct 170
            ||||||||||||||||||||
Sbjct: 3710 ctgctgctgctgcccttgct 3691
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>gb|AF461326.1| Drosophila malerkotliana malerkotliana hunchback (hb) gene, partial
           cds
          Length = 471

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 144 ccatgggctgctgctgctgc 163
           ||||||||||||||||||||
Sbjct: 118 ccatgggctgctgctgctgc 99
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>gb|AF461320.1| Drosophila mimetica hunchback (hb) gene, partial cds
          Length = 471

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 144 ccatgggctgctgctgctgc 163
           ||||||||||||||||||||
Sbjct: 100 ccatgggctgctgctgctgc 81
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>gb|AF461319.1| Drosophila lucipennis hunchback (hb) gene, partial cds
          Length = 459

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 144 ccatgggctgctgctgctgc 163
           ||||||||||||||||||||
Sbjct: 97  ccatgggctgctgctgctgc 78
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>ref|NM_142761.1| Drosophila melanogaster CG13859-RA (CG13859), mRNA
          Length = 384

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 373 catctgcctcgaggtggcgc 392
           ||||||||||||||||||||
Sbjct: 337 catctgcctcgaggtggcgc 318
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>gb|AC007550.70| Mus musculus strain 129S6/SvEvTac chromosome 11a2 clone rp21-434h10,
              complete sequence
          Length = 199956

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 149    ggctgctgctgctgcccttg 168
              ||||||||||||||||||||
Sbjct: 146038 ggctgctgctgctgcccttg 146019
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>emb|CR406830.1| Gallus gallus finished cDNA, clone ChEST736o3
          Length = 1064

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 151 ctgctgctgctgcccttgct 170
           ||||||||||||||||||||
Sbjct: 40  ctgctgctgctgcccttgct 21
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>dbj|AK003658.1| Mus musculus 18-day embryo whole body cDNA, RIKEN full-length
           enriched library, clone:1110013E23 product:hypothetical
           protein, full insert sequence
          Length = 749

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 151 ctgctgctgctgcccttgct 170
           ||||||||||||||||||||
Sbjct: 420 ctgctgctgctgcccttgct 439
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>gb|AC005522.2| Homo sapiens PAC clone RP5-1129E22 from 7, complete sequence
          Length = 149605

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 150   gctgctgctgctgcccttgc 169
             ||||||||||||||||||||
Sbjct: 14308 gctgctgctgctgcccttgc 14289
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>dbj|AK009095.1| Mus musculus adult male tongue cDNA, RIKEN full-length enriched
           library, clone:2310002J15 product:hypothetical protein,
           full insert sequence
          Length = 776

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 151 ctgctgctgctgcccttgct 170
           ||||||||||||||||||||
Sbjct: 454 ctgctgctgctgcccttgct 473
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>gb|AE003738.3| Drosophila melanogaster chromosome 3R, section 76 of 118 of the complete
              sequence
          Length = 287397

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 373    catctgcctcgaggtggcgc 392
              ||||||||||||||||||||
Sbjct: 184624 catctgcctcgaggtggcgc 184643
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>emb|BX322566.6| Zebrafish DNA sequence from clone CH211-209B6 in linkage group 23,
              complete sequence
          Length = 203127

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 145    catgggctgctgctgctgcc 164
              ||||||||||||||||||||
Sbjct: 177814 catgggctgctgctgctgcc 177795
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 153      gctgctgctgcccttgctcggccg 176
                ||||||||| ||||||||||||||
Sbjct: 24959124 gctgctgctccccttgctcggccg 24959147
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                            
Query: 373      catctgcctcgaggtggcgcgttgctgc 400
                |||||||||||| |||||||| ||||||
Sbjct: 16641138 catctgcctcgacgtggcgcgctgctgc 16641165
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 25       attattcaaagttcaaacaa 44
                ||||||||||||||||||||
Sbjct: 21713239 attattcaaagttcaaacaa 21713258
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                            
Query: 387      tggcgcgttgctgctggtgcgcgctgat 414
                ||||||||||||||||||| | ||||||
Sbjct: 27511230 tggcgcgttgctgctggtgagtgctgat 27511203
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>gb|AC009915.5|AC009915 Drosophila melanogaster, chromosome 3R, region 94A-94A, BAC clone
             BACR09L14, complete sequence
          Length = 167368

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 373   catctgcctcgaggtggcgc 392
             ||||||||||||||||||||
Sbjct: 94444 catctgcctcgaggtggcgc 94463
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>gb|AC007472.6|AC007472 Drosophila melanogaster, chromosome 2R, region 49E-49F, BAC clone
             BACR30D19, complete sequence
          Length = 163052

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 147   tgggctgctgctgctgcccttgct 170
             |||||||||||||||||| |||||
Sbjct: 88035 tgggctgctgctgctgccattgct 88012
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>ref|XM_575082.1| PREDICTED: Rattus norvegicus similar to RIKEN cDNA 2310002J15
           (LOC499747), mRNA
          Length = 736

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 151 ctgctgctgctgcccttgct 170
           ||||||||||||||||||||
Sbjct: 416 ctgctgctgctgcccttgct 435
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>ref|NM_001004408.1| Gallus gallus vitellogenin I (LOC424547), mRNA
          Length = 5952

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 151  ctgctgctgctgcccttgct 170
            ||||||||||||||||||||
Sbjct: 3710 ctgctgctgctgcccttgct 3691
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>dbj|AP005885.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0657H12
          Length = 142688

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 387    tggcgcgttgctgctggtgcgcgctgat 414
              ||||||||||||||||||| | ||||||
Sbjct: 102952 tggcgcgttgctgctggtgagtgctgat 102925
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>dbj|AP002913.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0480E02
          Length = 141862

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 148   gggctgctgctgctgccctt 167
             ||||||||||||||||||||
Sbjct: 66902 gggctgctgctgctgccctt 66883
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>dbj|AP005471.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
              clone:OSJNBa0062E01
          Length = 161804

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 25     attattcaaagttcaaacaa 44
              ||||||||||||||||||||
Sbjct: 112170 attattcaaagttcaaacaa 112189
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>gb|AC113286.11| Mus musculus chromosome 1, clone RP23-411P10, complete sequence
          Length = 204629

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 144    ccatgggctgctgctgctgc 163
              ||||||||||||||||||||
Sbjct: 104366 ccatgggctgctgctgctgc 104347
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>gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, complete sequence
          Length = 3131724

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 249    cctcggtcgccgcctccgca 268
              ||||||||||||||||||||
Sbjct: 349654 cctcggtcgccgcctccgca 349635
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>gb|AE003820.3| Drosophila melanogaster chromosome 2R, section 30 of 73 of the complete
              sequence
          Length = 263912

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 147    tgggctgctgctgctgcccttgct 170
              |||||||||||||||||| |||||
Sbjct: 157247 tgggctgctgctgctgccattgct 157224
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                            
Query: 373      catctgcctcgaggtggcgcgttgctgc 400
                |||||||||||| |||||||| ||||||
Sbjct: 16649779 catctgcctcgacgtggcgcgctgctgc 16649806
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 153      gctgctgctgcccttgctcggccg 176
                ||||||||| ||||||||||||||
Sbjct: 24887330 gctgctgctccccttgctcggccg 24887353
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>emb|AL831797.4|CNS08CAA Oryza sativa chromosome 12, . BAC OSJNBa0010M16 of library OSJNBa
            from chromosome 12 of cultivar Nipponbare of ssp.
            japonica of Oryza sativa (rice), complete sequence
          Length = 132741

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 153  gctgctgctgcccttgctcggccg 176
            ||||||||| ||||||||||||||
Sbjct: 5744 gctgctgctccccttgctcggccg 5721
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>emb|CR382127.1| Yarrowia lipolytica chromosome A of strain CLIB122 of Yarrowia lipolytica
          Length = 2303261

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 144    ccatgggctgctgctgctgc 163
              ||||||||||||||||||||
Sbjct: 683001 ccatgggctgctgctgctgc 682982
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>emb|AL732309.9| Mouse DNA sequence from clone RP23-132N23 on chromosome 2, complete
              sequence
          Length = 221859

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 151    ctgctgctgctgcccttgct 170
              ||||||||||||||||||||
Sbjct: 131780 ctgctgctgctgcccttgct 131761
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>emb|AL591404.4| Mouse DNA sequence from clone RP23-394O9 on chromosome 11, complete
            sequence
          Length = 203613

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 147  tgggctgctgctgctgccct 166
            ||||||||||||||||||||
Sbjct: 2050 tgggctgctgctgctgccct 2069
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>emb|X15359.1|DVHB Drosophila virilis hunchback (hb) gene for zinc-finger protein
            transcription factor
          Length = 8807

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 144  ccatgggctgctgctgctgc 163
            ||||||||||||||||||||
Sbjct: 5914 ccatgggctgctgctgctgc 5895


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,644,964
Number of Sequences: 3902068
Number of extensions: 3644964
Number of successful extensions: 241391
Number of sequences better than 10.0: 81
Number of HSP's better than 10.0 without gapping: 82
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 239350
Number of HSP's gapped (non-prelim): 2041
length of query: 424
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 402
effective length of database: 17,147,199,772
effective search space: 6893174308344
effective search space used: 6893174308344
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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