Clone Information

BLAST Search Result

Clone Name	rbart23f11
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	AVP_HORVU (Q06572) Pyrophosphate-energized vacuolar membrane pro...	50	2e-06
2	AVP1_ARATH (P31414) Pyrophosphate-energized vacuolar membrane pr...	45	3e-05
3	AVP_PHAAU (P21616) Pyrophosphate-energized vacuolar membrane pro...	44	1e-04
4	MDTA_SALTY (Q8ZNQ3) Multidrug resistance protein mdtA precursor ...	34	0.072
5	MDTA_SALTI (Q8Z5F8) Multidrug resistance protein mdtA precursor ...	33	0.16
6	MAGD1_RAT (Q9ES73) Melanoma-associated antigen D1 (MAGE-D1 antig...	33	0.21
7	MAGD1_MOUSE (Q9QYH6) Melanoma-associated antigen D1 (MAGE-D1 ant...	33	0.21
8	HPPA_LEPIN (Q8F641) Pyrophosphate-energized proton pump (EC 3.6....	32	0.36
9	HPPA_LEPIC (Q72Q29) Pyrophosphate-energized proton pump (EC 3.6....	32	0.36
10	UBX_MUSDO (Q25451) Homeotic protein ultrabithorax (Fragment)	32	0.47
11	MSL3_DROVI (Q9NBL2) Protein male-specific lethal-3	31	0.80
12	S2A4R_HUMAN (Q9NR83) SLC2A4 regulator (GLUT4 enhancer factor) (G...	30	1.8
13	FRQ_SORFI (Q09033) Frequency clock protein	29	2.3
14	GPR62_HUMAN (Q9BZJ7) Probable G-protein coupled receptor 62 (hGP...	29	2.3
15	IF2_STRAW (Q82K53) Translation initiation factor IF-2	28	4.0
16	RING1_DROME (Q9VB08) Ubiquitin ligase protein RING1 (EC 6.3.2.-)...	28	4.0
17	GU01_RAT (P35894) Putative gustatory receptor clone PTE01 (Fragm...	28	4.0
18	MAF_AVIS4 (P23091) Transforming protein Maf	23	5.3
19	MCMR_DROME (Q9VF30) DNA replication licensing factor REC (Protei...	28	6.8
20	UNC89_CAEEL (O01761) Muscle M-line assembly protein unc-89 (Unco...	28	6.8
21	CAC1F_MOUSE (Q9JIS7) Voltage-dependent L-type calcium channel al...	28	6.8
22	CO4A1_DROME (P08120) Collagen alpha-1(IV) chain precursor	28	6.8
23	VA5_VESVU (Q05110) Venom allergen 5 precursor (Antigen 5) (Ag5) ...	27	8.8
24	EGLN2_MOUSE (Q91YE2) Egl nine homolog 2 (EC 1.14.11.-) (Hypoxia-...	27	8.8
25	ZFNL1_ORYSA (Q5NAW2) Zinc finger CCCH type domain-containing pro...	27	8.8
26	DP87_DICDI (Q04503) Prespore protein DP87 precursor	27	8.8
27	VA5_VESPE (P35785) Venom allergen 5 (Antigen 5) (Ag5) (Allergen ...	27	8.8
28	VA5_VESMC (P35760) Venom allergen 5 (Antigen 5) (Ag5) (Allergen ...	27	8.8
29	VA5_VESGE (P35784) Venom allergen 5 (Antigen 5) (Ag5) (Allergen ...	27	8.8
30	VA5_VESFL (P35783) Venom allergen 5 (Antigen 5) (Ag5) (Allergen ...	27	8.8
31	VA5_VESSQ (P35786) Venom allergen 5 (Antigen 5) (Ag5) (Allergen ...	27	8.8
32	MIB_DROME (Q9VUX2) Ubiquitin ligase protein mind-bomb (EC 6.3.2....	27	8.8
33	KCC2A_RAT (P11275) Calcium/calmodulin-dependent protein kinase t...	27	8.8
34	KCC2A_MOUSE (P11798) Calcium/calmodulin-dependent protein kinase...	27	8.8
35	GAG_MLVF5 (P26807) Gag polyprotein (Core polyprotein) [Contains:...	27	8.8
36	HPPA_CLOTE (Q898Q9) Pyrophosphate-energized proton pump (EC 3.6....	27	8.8
37	GABR2_RAT (O88871) Gamma-aminobutyric acid type B receptor, subu...	27	8.8
38	PRXC_STRLI (P49323) Non-heme chloroperoxidase (EC 1.11.1.10) (Ch...	27	8.8
39	GABR2_HUMAN (O75899) Gamma-aminobutyric acid type B receptor, su...	27	8.8
40	GAP1_DROME (P48423) GTPase-activating protein (Ras GTPase-activa...	27	8.8

>AVP_HORVU (Q06572) Pyrophosphate-energized vacuolar membrane proton pump (EC|
           3.6.1.1) (Pyrophosphate-energized inorganic
           pyrophosphatase) (H(+)-PPase)
          Length = 762

 Score = 49.7 bits (117), Expect = 2e-06
 Identities = 23/23 (100%), Positives = 23/23 (100%)
 Frame = -2

Query: 409 MAVESLVFAPFFATYGGLLFKYI 341
           MAVESLVFAPFFATYGGLLFKYI
Sbjct: 740 MAVESLVFAPFFATYGGLLFKYI 762

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>AVP1_ARATH (P31414) Pyrophosphate-energized vacuolar membrane proton pump 1|
           (EC 3.6.1.1) (Pyrophosphate-energized inorganic
           pyrophosphatase 1) (H(+)-PPase 1) (Vacuolar proton
           pyrophosphatase 1) (Vacuolar proton pyrophosphatase 3)
          Length = 770

 Score = 45.4 bits (106), Expect = 3e-05
 Identities = 20/22 (90%), Positives = 22/22 (100%)
 Frame = -2

Query: 409 MAVESLVFAPFFATYGGLLFKY 344
           MAVESLVFAPFFAT+GG+LFKY
Sbjct: 748 MAVESLVFAPFFATHGGILFKY 769

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>AVP_PHAAU (P21616) Pyrophosphate-energized vacuolar membrane proton pump (EC|
           3.6.1.1) (Pyrophosphate-energized inorganic
           pyrophosphatase) (H(+)-PPase) (Vacuolar
           H(+)-pyrophosphatase)
          Length = 764

 Score = 43.5 bits (101), Expect = 1e-04
 Identities = 20/21 (95%), Positives = 21/21 (100%)
 Frame = -2

Query: 409 MAVESLVFAPFFATYGGLLFK 347
           MAVESLVFAPFFAT+GGLLFK
Sbjct: 742 MAVESLVFAPFFATHGGLLFK 762

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>MDTA_SALTY (Q8ZNQ3) Multidrug resistance protein mdtA precursor (Multidrug|
           transporter mdtA)
          Length = 413

 Score = 34.3 bits (77), Expect = 0.072
 Identities = 26/82 (31%), Positives = 40/82 (48%), Gaps = 13/82 (15%)
 Frame = +2

Query: 200 VGNRGNPGMTLTTKNNSSAQRTK------------AGGQAGGGVIRDSVCRSSLDSSTLD 343
           +GN G+    L  +NN S +R K            AG  AG  V+ D + R + + + ++
Sbjct: 330 MGNEGHFVWVLNDENNVSKKRVKIGIQDNRNVVISAGLSAGDRVVTDGIDRLT-EGAKVE 388

Query: 344 VLEQQTSVRGEEG-REHEGLNG 406
           V+E QT+V  E+    HEG  G
Sbjct: 389 VVEPQTTVADEKSPSRHEGQKG 410

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>MDTA_SALTI (Q8Z5F8) Multidrug resistance protein mdtA precursor (Multidrug|
           transporter mdtA)
          Length = 413

 Score = 33.1 bits (74), Expect = 0.16
 Identities = 25/82 (30%), Positives = 40/82 (48%), Gaps = 13/82 (15%)
 Frame = +2

Query: 200 VGNRGNPGMTLTTKNNSSAQRTK------------AGGQAGGGVIRDSVCRSSLDSSTLD 343
           +GN G+    L  +NN S +R K            AG  AG  V+ D + R + + + ++
Sbjct: 330 MGNEGHFVWVLNDENNVSKKRVKIGIQDNRNVVISAGLSAGDRVVTDGIDRLT-EGAKVE 388

Query: 344 VLEQQTSVRGEEG-REHEGLNG 406
           V+E QT++  E+    HEG  G
Sbjct: 389 VVEPQTTMADEKSPSRHEGQKG 410

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>MAGD1_RAT (Q9ES73) Melanoma-associated antigen D1 (MAGE-D1 antigen)|
           (Neurotrophin receptor-interacting MAGE homolog)
           (Sertoli cell necdin-related gene 1) (SNERG-1)
          Length = 775

 Score = 32.7 bits (73), Expect = 0.21
 Identities = 18/62 (29%), Positives = 29/62 (46%)
 Frame = +2

Query: 218 PGMTLTTKNNSSAQRTKAGGQAGGGVIRDSVCRSSLDSSTLDVLEQQTSVRGEEGREHEG 397
           PG    T+N + A+    G  AG      +  ++S D S    +E +T +RG+  R+   
Sbjct: 192 PGADAQTQNVNQAKMADVGTSAGISETDGAAAQTSADGSQAQNVESRTIIRGKRTRKINN 251

Query: 398 LN 403
           LN
Sbjct: 252 LN 253

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>MAGD1_MOUSE (Q9QYH6) Melanoma-associated antigen D1 (MAGE-D1 antigen)|
           (Neurotrophin receptor-interacting MAGE homolog)
           (Dlxin-1)
          Length = 775

 Score = 32.7 bits (73), Expect = 0.21
 Identities = 18/62 (29%), Positives = 29/62 (46%)
 Frame = +2

Query: 218 PGMTLTTKNNSSAQRTKAGGQAGGGVIRDSVCRSSLDSSTLDVLEQQTSVRGEEGREHEG 397
           PG    T+N + A+    G  AG      +  ++S D S    +E +T +RG+  R+   
Sbjct: 190 PGADAQTQNVNQAKMADVGTSAGISEADGAAAQTSADGSQTQNVESRTIIRGKRTRKVNN 249

Query: 398 LN 403
           LN
Sbjct: 250 LN 251

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>HPPA_LEPIN (Q8F641) Pyrophosphate-energized proton pump (EC 3.6.1.1)|
           (Pyrophosphate-energized inorganic pyrophosphatase)
           (H+-PPase) (Membrane-bound proton-translocating
           pyrophosphatase)
          Length = 704

 Score = 32.0 bits (71), Expect = 0.36
 Identities = 14/21 (66%), Positives = 16/21 (76%)
 Frame = -2

Query: 409 MAVESLVFAPFFATYGGLLFK 347
           MA+ SLVFA FF   GGL+FK
Sbjct: 681 MAITSLVFAEFFVQQGGLIFK 701

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>HPPA_LEPIC (Q72Q29) Pyrophosphate-energized proton pump (EC 3.6.1.1)|
           (Pyrophosphate-energized inorganic pyrophosphatase)
           (H+-PPase) (Membrane-bound proton-translocating
           pyrophosphatase)
          Length = 704

 Score = 32.0 bits (71), Expect = 0.36
 Identities = 14/21 (66%), Positives = 16/21 (76%)
 Frame = -2

Query: 409 MAVESLVFAPFFATYGGLLFK 347
           MA+ SLVFA FF   GGL+FK
Sbjct: 681 MAITSLVFAEFFVQQGGLIFK 701

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>UBX_MUSDO (Q25451) Homeotic protein ultrabithorax (Fragment)|
          Length = 248

 Score = 31.6 bits (70), Expect = 0.47
 Identities = 17/45 (37%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
 Frame = +2

Query: 188 GERGVGNRGNPGMTLTTKNNSSAQRTKAGGQAGGG---VIRDSVC 313
           G  G G  G+ G      N ++ Q T  GG AGGG    +R S C
Sbjct: 115 GGTGGGGGGSAGSANGANNTANGQNTSGGGGAGGGGGMPVRPSAC 159

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>MSL3_DROVI (Q9NBL2) Protein male-specific lethal-3|
          Length = 543

 Score = 30.8 bits (68), Expect = 0.80
 Identities = 19/66 (28%), Positives = 29/66 (43%)
 Frame = +2

Query: 197 GVGNRGNPGMTLTTKNNSSAQRTKAGGQAGGGVIRDSVCRSSLDSSTLDVLEQQTSVRGE 376
           G GNR   G    +++NSS ++ +     GG    D   RS+    +L V  + T     
Sbjct: 184 GSGNRSRDGSGNRSRDNSSGRKKQRDKSKGGDKNDDGERRSARSQFSLHVSPKDTHTTDA 243

Query: 377 EGREHE 394
           E R H+
Sbjct: 244 EKRIHQ 249

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>S2A4R_HUMAN (Q9NR83) SLC2A4 regulator (GLUT4 enhancer factor) (GEF) (Huntington|
           disease gene regulatory region-binding protein 1)
           (HDBP-1)
          Length = 387

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 16/46 (34%), Positives = 23/46 (50%)
 Frame = -3

Query: 324 SDDLQTLSRITPPPACPPAFVRCALLLFLVVNVIPGLPRLPTPLSP 187
           +D L +L+ ++P  + PPAF R  L   L    +P   R P P  P
Sbjct: 254 TDGLSSLTPVSPTASMPPAFPRLELPELLEPPALPSPLRPPAPPLP 299

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>FRQ_SORFI (Q09033) Frequency clock protein|
          Length = 997

 Score = 29.3 bits (64), Expect = 2.3
 Identities = 21/63 (33%), Positives = 31/63 (49%), Gaps = 4/63 (6%)
 Frame = -2

Query: 220  RIAAV-TYPPFPWPLEGVMLVSPLHYRLVAPCSRRERPDVLP---RWYVPGKFSSSHDDD 53
            R+A++ T  P P P    ++++PL    VA    R  P  LP    +Y P    SS DD 
Sbjct: 815  RLASIRTSSPLPPPRSRNLILAPLQIEYVAGEFHRLNPASLPPPAMFYPPFSTDSSWDDG 874

Query: 52   DNV 44
            D++
Sbjct: 875  DDL 877

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>GPR62_HUMAN (Q9BZJ7) Probable G-protein coupled receptor 62 (hGPCR8)|
          Length = 368

 Score = 29.3 bits (64), Expect = 2.3
 Identities = 13/23 (56%), Positives = 16/23 (69%)
 Frame = -3

Query: 315 LQTLSRITPPPACPPAFVRCALL 247
           L  LS + PPPA PPA  RC++L
Sbjct: 143 LGALSLLGPPPAPPPAPARCSVL 165

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>IF2_STRAW (Q82K53) Translation initiation factor IF-2|
          Length = 1046

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 17/37 (45%), Positives = 18/37 (48%)
 Frame = +2

Query: 182 RPGERGVGNRGNPGMTLTTKNNSSAQRTKAGGQAGGG 292
           RPG    GNR NPGM          QR  AG + GGG
Sbjct: 295 RPGGAPGGNRPNPGM--------MPQRPAAGPRPGGG 323

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>RING1_DROME (Q9VB08) Ubiquitin ligase protein RING1 (EC 6.3.2.-) (dRING1)|
           (dRING protein) (Sex comb extra protein)
          Length = 435

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = +2

Query: 191 ERGVGNRGNPGMTLTTKNNSSAQRTKAGGQAGGG 292
           ++ + N  N G+ L ++N     RTK GG  GGG
Sbjct: 132 QQALVNSINEGIKLQSQNRPQRFRTKGGGGGGGG 165

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>GU01_RAT (P35894) Putative gustatory receptor clone PTE01 (Fragment)|
          Length = 185

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 18/67 (26%), Positives = 29/67 (43%)
 Frame = -2

Query: 337 STRVER*STDTVTNNSPACLPARLRTLCAAVIFGCQCHSRIAAVTYPPFPWPLEGVMLVS 158
           ST + +   D  TNN        L  +   ++FGC     + A+ Y  F      V +  
Sbjct: 17  STTLPKMIVDIQTNNRAISYSGCLTQMSFFMLFGCLDSLLLTAMAYDRF------VAICH 70

Query: 157 PLHYRLV 137
           PLHY+++
Sbjct: 71  PLHYQVI 77

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>MAF_AVIS4 (P23091) Transforming protein Maf|
          Length = 369

 Score = 23.5 bits (49), Expect(2) = 5.3
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +1

Query: 4   TAIIMISLFKGGFKHYRRHH 63
           +A+I  +  +GG  HY  HH
Sbjct: 159 SAVIAAAAAQGGAPHYHHHH 178



 Score = 23.1 bits (48), Expect(2) = 5.3
 Identities = 15/48 (31%), Positives = 19/48 (39%), Gaps = 6/48 (12%)
 Frame = +2

Query: 167 HNAFKRPGERGVGNRGN------PGMTLTTKNNSSAQRTKAGGQAGGG 292
           H+    P   G G  G       PG    +  +SSA  +  GG  GGG
Sbjct: 175 HHHHHHPHHGGGGGGGGHPHGAAPGSAPPSSASSSAAGSGGGGGGGGG 222

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>MCMR_DROME (Q9VF30) DNA replication licensing factor REC (Protein mini|
           chromosome maintenance-related) (Protein
           recombination-defective)
          Length = 885

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 13/30 (43%), Positives = 18/30 (60%)
 Frame = +2

Query: 239 KNNSSAQRTKAGGQAGGGVIRDSVCRSSLD 328
           K  SS Q T+ GG AGGG  + +  R+ L+
Sbjct: 798 KEGSSRQGTRGGGGAGGGAGKSAQLRNFLE 827

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>UNC89_CAEEL (O01761) Muscle M-line assembly protein unc-89 (Uncoordinated protein|
            89)
          Length = 8081

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 16/50 (32%), Positives = 24/50 (48%)
 Frame = +2

Query: 221  GMTLTTKNNSSAQRTKAGGQAGGGVIRDSVCRSSLDSSTLDVLEQQTSVR 370
            G+T+ TK + S   T   G   GGV   S+  S ++   +   + QT VR
Sbjct: 1300 GVTVETKESESESATTVIGGGSGGVTEGSISVSKIE--VVSKTDSQTDVR 1347

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>CAC1F_MOUSE (Q9JIS7) Voltage-dependent L-type calcium channel alpha-1F subunit|
            (Voltage-gated calcium channel alpha subunit Cav1.4)
          Length = 1985

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 12/20 (60%), Positives = 15/20 (75%)
 Frame = +3

Query: 60   SWDEENLPGTYQRGRTSGLS 119
            S ++  +PGTY RGRTSG S
Sbjct: 1821 SCEDLPIPGTYHRGRTSGPS 1840

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>CO4A1_DROME (P08120) Collagen alpha-1(IV) chain precursor|
          Length = 1775

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 25/91 (27%), Positives = 34/91 (37%), Gaps = 17/91 (18%)
 Frame = +2

Query: 185 PGERGVGNRGNPGMTLTTKNNSSAQRTKAGGQAGGGVIRDSV------CRS----SLDSS 334
           PG+  +G  G PG          A R    GQ G   I+  V      CR+       +S
Sbjct: 525 PGDSKLGRPGTPGAAGAPGQKGDAGRPGTPGQKGDMGIKGDVGGKCSSCRAGPKGDKGTS 584

Query: 335 TLDVLEQQTSVRGEEG-------REHEGLNG 406
            L  +  +   RG  G       R H+G+NG
Sbjct: 585 GLPGIPGKDGARGPPGERGYPGERGHDGING 615

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>VA5_VESVU (Q05110) Venom allergen 5 precursor (Antigen 5) (Ag5) (Allergen Ves|
           v 5) (Ves v V)
          Length = 227

 Score = 27.3 bits (59), Expect = 8.8
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = +2

Query: 167 HNAFKRPGERGVGNRGNPGMTLTTKN 244
           HN F++   RG+  RGNPG     KN
Sbjct: 71  HNDFRQKIARGLETRGNPGPQPPAKN 96

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>EGLN2_MOUSE (Q91YE2) Egl nine homolog 2 (EC 1.14.11.-) (Hypoxia-inducible|
           factor prolyl hydroxylase 1) (HIF-prolyl hydroxylase 1)
           (HIF-PH1) (Falkor)
          Length = 419

 Score = 27.3 bits (59), Expect = 8.8
 Identities = 18/42 (42%), Positives = 21/42 (50%), Gaps = 3/42 (7%)
 Frame = +2

Query: 173 AFKRPGERGVGNRGN--PGMTLT-TKNNSSAQRTKAGGQAGG 289
           A+ RPG  G  + GN  P  T T T   +S  R   GGQ GG
Sbjct: 45  AYHRPGASGEASAGNGTPRTTATATTTTASPLREGFGGQDGG 86

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>ZFNL1_ORYSA (Q5NAW2) Zinc finger CCCH type domain-containing protein ZFN-like 1|
          Length = 476

 Score = 27.3 bits (59), Expect = 8.8
 Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 5/62 (8%)
 Frame = -2

Query: 241 FGCQC---HSRIAAVTYPP--FPWPLEGVMLVSPLHYRLVAPCSRRERPDVLPRWYVPGK 77
           FG  C   H     V   P  +P PL+   + SP  Y  +A   +  RP V+P  Y+PG 
Sbjct: 170 FGTTCKFHHPEFGGVPMTPGIYP-PLQSPSIASPHPYASLANW-QMGRPPVVPGSYIPGS 227

Query: 76  FS 71
           ++
Sbjct: 228 YT 229

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>DP87_DICDI (Q04503) Prespore protein DP87 precursor|
          Length = 555

 Score = 27.3 bits (59), Expect = 8.8
 Identities = 14/36 (38%), Positives = 18/36 (50%)
 Frame = +2

Query: 227 TLTTKNNSSAQRTKAGGQAGGGVIRDSVCRSSLDSS 334
           T+ T  +++   T  GG   GG   DS   SS DSS
Sbjct: 450 TVATTTSATTAGTTTGGTTTGGSTSDSSAASSADSS 485

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>VA5_VESPE (P35785) Venom allergen 5 (Antigen 5) (Ag5) (Allergen Ves p 5) (Ves|
           p V)
          Length = 204

 Score = 27.3 bits (59), Expect = 8.8
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = +2

Query: 167 HNAFKRPGERGVGNRGNPGMTLTTKN 244
           HN F++   RG+  RGNPG     KN
Sbjct: 48  HNDFRQKIARGLETRGNPGPQPPAKN 73

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>VA5_VESMC (P35760) Venom allergen 5 (Antigen 5) (Ag5) (Allergen Ves m 5) (Ves|
           m V)
          Length = 204

 Score = 27.3 bits (59), Expect = 8.8
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = +2

Query: 167 HNAFKRPGERGVGNRGNPGMTLTTKN 244
           HN F++   RG+  RGNPG     KN
Sbjct: 48  HNDFRQKIARGLETRGNPGPQPPAKN 73

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>VA5_VESGE (P35784) Venom allergen 5 (Antigen 5) (Ag5) (Allergen Ves g 5) (Ves|
           g V)
          Length = 204

 Score = 27.3 bits (59), Expect = 8.8
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = +2

Query: 167 HNAFKRPGERGVGNRGNPGMTLTTKN 244
           HN F++   RG+  RGNPG     KN
Sbjct: 48  HNDFRQKIARGLETRGNPGPQPPAKN 73

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>VA5_VESFL (P35783) Venom allergen 5 (Antigen 5) (Ag5) (Allergen Ves f 5) (Ves|
           f V)
          Length = 204

 Score = 27.3 bits (59), Expect = 8.8
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = +2

Query: 167 HNAFKRPGERGVGNRGNPGMTLTTKN 244
           HN F++   RG+  RGNPG     KN
Sbjct: 48  HNDFRQKIARGLETRGNPGPQPPAKN 73

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>VA5_VESSQ (P35786) Venom allergen 5 (Antigen 5) (Ag5) (Allergen Ves s 5) (Ves|
           s V)
          Length = 205

 Score = 27.3 bits (59), Expect = 8.8
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = +2

Query: 167 HNAFKRPGERGVGNRGNPGMTLTTKN 244
           HN F+    RG+  RGNPG     KN
Sbjct: 49  HNDFRNKVARGLETRGNPGPQPPAKN 74

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>MIB_DROME (Q9VUX2) Ubiquitin ligase protein mind-bomb (EC 6.3.2.-) (Mind bomb|
           homolog) (D-mib)
          Length = 1226

 Score = 27.3 bits (59), Expect = 8.8
 Identities = 14/32 (43%), Positives = 17/32 (53%)
 Frame = +2

Query: 197 GVGNRGNPGMTLTTKNNSSAQRTKAGGQAGGG 292
           GVG  G  G +L     SS+  + AGG A GG
Sbjct: 60  GVGGGGGGGGSLPGGTTSSSSASAAGGVAAGG 91

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>KCC2A_RAT (P11275) Calcium/calmodulin-dependent protein kinase type II alpha|
           chain (EC 2.7.11.17) (CaM-kinase II alpha chain) (CaM
           kinase II alpha subunit) (CaMK-II alpha subunit)
          Length = 478

 Score = 27.3 bits (59), Expect = 8.8
 Identities = 19/53 (35%), Positives = 28/53 (52%)
 Frame = +2

Query: 221 GMTLTTKNNSSAQRTKAGGQAGGGVIRDSVCRSSLDSSTLDVLEQQTSVRGEE 379
           G  LTT     A R  +GG++GG    D V  SS +S+   + ++ T VR +E
Sbjct: 301 GAILTTM---LATRNFSGGKSGGNKKNDGVKESS-ESTNTTIEDEDTKVRKQE 349

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>KCC2A_MOUSE (P11798) Calcium/calmodulin-dependent protein kinase type II alpha|
           chain (EC 2.7.11.17) (CaM-kinase II alpha chain) (CaM
           kinase II alpha subunit) (CaMK-II alpha subunit)
          Length = 478

 Score = 27.3 bits (59), Expect = 8.8
 Identities = 19/53 (35%), Positives = 28/53 (52%)
 Frame = +2

Query: 221 GMTLTTKNNSSAQRTKAGGQAGGGVIRDSVCRSSLDSSTLDVLEQQTSVRGEE 379
           G  LTT     A R  +GG++GG    D V  SS +S+   + ++ T VR +E
Sbjct: 301 GAILTTM---LATRNFSGGKSGGNKKNDGVKESS-ESTNTTIEDEDTKVRKQE 349

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>GAG_MLVF5 (P26807) Gag polyprotein (Core polyprotein) [Contains: Matrix|
           protein p15; RNA-binding phosphoprotein p12; Capsid
           protein p30; Nucleocapsid protein p10]
          Length = 538

 Score = 27.3 bits (59), Expect = 8.8
 Identities = 14/34 (41%), Positives = 19/34 (55%)
 Frame = -2

Query: 199 PPFPWPLEGVMLVSPLHYRLVAPCSRRERPDVLP 98
           PPFP P +     S L+  L +P + + RP VLP
Sbjct: 120 PPFPTPPQ-----SSLYPALTSPLNTKPRPQVLP 148

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>HPPA_CLOTE (Q898Q9) Pyrophosphate-energized proton pump (EC 3.6.1.1)|
           (Pyrophosphate-energized inorganic pyrophosphatase)
           (H+-PPase) (Membrane-bound proton-translocating
           pyrophosphatase)
          Length = 673

 Score = 27.3 bits (59), Expect = 8.8
 Identities = 12/23 (52%), Positives = 14/23 (60%)
 Frame = -2

Query: 409 MAVESLVFAPFFATYGGLLFKYI 341
           M + SLVFAP    YGG+L   I
Sbjct: 650 MTIVSLVFAPVVLQYGGILLNLI 672

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>GABR2_RAT (O88871) Gamma-aminobutyric acid type B receptor, subunit 2|
           precursor (GABA-B receptor 2) (GABA-B-R2) (Gb2)
           (GABABR2) (G-protein coupled receptor 51)
          Length = 940

 Score = 27.3 bits (59), Expect = 8.8
 Identities = 19/44 (43%), Positives = 23/44 (52%), Gaps = 7/44 (15%)
 Frame = -3

Query: 291 PPPACPPAFVRCALLLFLVVNVIP-------GLPRLPTPLSPGL 181
           PPP  PPA +   LLL L++ + P       G PR P P SP L
Sbjct: 13  PPPPPPPARLLLPLLLSLLLWLAPGAWGWTRGAPR-PPPSSPPL 55

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>PRXC_STRLI (P49323) Non-heme chloroperoxidase (EC 1.11.1.10) (Chloride|
           peroxidase) (CPO-L) (Chloroperoxidase L)
          Length = 275

 Score = 27.3 bits (59), Expect = 8.8
 Identities = 17/48 (35%), Positives = 23/48 (47%)
 Frame = -2

Query: 187 WPLEGVMLVSPLHYRLVAPCSRRERPDVLPRWYVPGKFSSSHDDDDNV 44
           W L+G+M  +  HY  +A  S  +  D L R  VP     +H  DD V
Sbjct: 183 WWLQGMMGAANAHYECIAAFSETDFTDDLKRIDVP--VLVAHGTDDQV 228

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>GABR2_HUMAN (O75899) Gamma-aminobutyric acid type B receptor, subunit 2|
           precursor (GABA-B receptor 2) (GABA-B-R2) (Gb2)
           (GABABR2) (G-protein coupled receptor 51) (HG20)
          Length = 941

 Score = 27.3 bits (59), Expect = 8.8
 Identities = 19/44 (43%), Positives = 23/44 (52%), Gaps = 7/44 (15%)
 Frame = -3

Query: 291 PPPACPPAFVRCALLLFLVVNVIP-------GLPRLPTPLSPGL 181
           PPP  PPA +   LLL L++ + P       G PR P P SP L
Sbjct: 14  PPPPPPPARLLLLLLLPLLLPLAPGAWGWARGAPR-PPPSSPPL 56

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>GAP1_DROME (P48423) GTPase-activating protein (Ras GTPase-activating protein)|
          Length = 1163

 Score = 27.3 bits (59), Expect = 8.8
 Identities = 12/29 (41%), Positives = 19/29 (65%)
 Frame = -1

Query: 173 RYVSLTITLPACSSM**KRETRCPPSLVC 87
           R+V +TI +PAC  +  K++  C P +VC
Sbjct: 277 RFVGVTIKVPACVDL-AKKQGTCDPFVVC 304


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 62,350,111
Number of Sequences: 219361
Number of extensions: 1397475
Number of successful extensions: 4766
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 4559
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4763
length of database: 80,573,946
effective HSP length: 112
effective length of database: 56,005,514
effective search space used: 1344132336
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result