>RL5B_ORYSA (Q8L4L4) 60S ribosomal protein L5-2|
          Length = 304

 Score = 63.5 bits (153), Expect = 1e-10
 Identities = 31/34 (91%), Positives = 31/34 (91%)
 Frame = -2

Query: 331 PKTHKRYNPKKLTYEQRKASLVERLNALNSSGGA 230
           P THKRYN KKLTYEQRKASLVERLNALNSS GA
Sbjct: 261 PATHKRYNLKKLTYEQRKASLVERLNALNSSAGA 294

>RL5A_ORYSA (P49625) 60S ribosomal protein L5-1|
          Length = 304

 Score = 63.5 bits (153), Expect = 1e-10
 Identities = 31/34 (91%), Positives = 31/34 (91%)
 Frame = -2

Query: 331 PKTHKRYNPKKLTYEQRKASLVERLNALNSSGGA 230
           P THKRYN KKLTYEQRKASLVERLNALNSS GA
Sbjct: 261 PATHKRYNLKKLTYEQRKASLVERLNALNSSAGA 294

>RL5_SOLME (P93779) 60S ribosomal protein L5 (Fragment)|
          Length = 121

 Score = 61.2 bits (147), Expect = 6e-10
 Identities = 27/33 (81%), Positives = 31/33 (93%)
 Frame = -2

Query: 331 PKTHKRYNPKKLTYEQRKASLVERLNALNSSGG 233
           PKTHKRYN KKLTYE+RKA L+ERLNALN++GG
Sbjct: 79  PKTHKRYNLKKLTYEERKAKLIERLNALNAAGG 111

>RL5_CUCSA (Q6UNT2) 60S ribosomal protein L5|
          Length = 302

 Score = 54.7 bits (130), Expect = 6e-08
 Identities = 25/31 (80%), Positives = 28/31 (90%)
 Frame = -2

Query: 331 PKTHKRYNPKKLTYEQRKASLVERLNALNSS 239
           PK HKRYN KKLTY++RKA LVERLNALNS+
Sbjct: 260 PKAHKRYNLKKLTYDERKARLVERLNALNSA 290

>RL5_ARATH (P49227) 60S ribosomal protein L5|
          Length = 301

 Score = 52.8 bits (125), Expect = 2e-07
 Identities = 23/33 (69%), Positives = 27/33 (81%)
 Frame = -2

Query: 331 PKTHKRYNPKKLTYEQRKASLVERLNALNSSGG 233
           PK HKRYN KKLTYE+RK  L+ER+ ALN +GG
Sbjct: 260 PKEHKRYNLKKLTYEERKNKLIERVKALNGAGG 292

>ATG18_DEBHA (Q6BIL4) Autophagy-related protein 18|
          Length = 562

 Score = 27.7 bits (60), Expect = 7.4
 Identities = 21/67 (31%), Positives = 29/67 (43%), Gaps = 4/67 (5%)
 Frame = +1

Query: 16  PSII*DNPELQNGTQNQGG----RYNMRSAKNLSKNASHDILLFNAIKQVHLEA*RQHYR 183
           P  I  +  L NG    GG    + N++S  N S N   D+++FN      L     H  
Sbjct: 191 PKTITHDSLLVNGINTNGGMNSIQNNIQSVSN-SPNRIGDVIIFNTTTLQPLSVIEAHKS 249

Query: 184 GLGSITL 204
            L +ITL
Sbjct: 250 ALAAITL 256

>PMA10_ARATH (Q43128) ATPase 10, plasma membrane-type (EC 3.6.3.6) (Proton pump|
           10)
          Length = 947

 Score = 27.7 bits (60), Expect = 7.4
 Identities = 13/28 (46%), Positives = 19/28 (67%)
 Frame = -3

Query: 102 QVFSTPHVVPAPLVLSTVLEFWIILNYT 19
           Q+F+T  V+   L L TVL +WII++ T
Sbjct: 715 QIFATGIVIGTYLALVTVLFYWIIVSTT 742

>NOTCH_DROME (P07207) Neurogenic locus Notch protein precursor|
          Length = 2703

 Score = 27.7 bits (60), Expect = 7.4
 Identities = 10/16 (62%), Positives = 12/16 (75%)
 Frame = -2

Query: 106  CSSF*HSACCTCPLGF 59
            CS + +S  CTCPLGF
Sbjct: 999  CSQYVNSYTCTCPLGF 1014

>T2BLA_BACSQ (Q9LAI1) Type IIT restriction enzyme BslI alpha subunit (EC|
           3.1.21.4) (Endonuclease BslI alpha subunit)
           (R.BslIalpha)
          Length = 225

 Score = 27.3 bits (59), Expect = 9.7
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = +1

Query: 34  NPELQNGTQNQGGRYNMRSAKNLSKN 111
           N E+Q  T  QGG +++ S+ N+S N
Sbjct: 102 NEEIQRATDEQGGVFDLNSSFNVSLN 127

>RL5_NEUCR (O59953) 60S ribosomal protein L5 (CPR4)|
          Length = 301

 Score = 27.3 bits (59), Expect = 9.7
 Identities = 13/25 (52%), Positives = 16/25 (64%)
 Frame = -2

Query: 316 RYNPKKLTYEQRKASLVERLNALNS 242
           +Y   KLT EQR A + ER+ AL S
Sbjct: 276 KYKKSKLTREQRAAGVQERIAALRS 300


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 43,498,410
Number of Sequences: 219361
Number of extensions: 715993
Number of successful extensions: 1629
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1568
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1629
length of database: 80,573,946
effective HSP length: 86
effective length of database: 61,708,900
effective search space used: 1481013600
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)