>ref|NM_190269.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 915

 Score = 89.7 bits (45), Expect = 5e-15
 Identities = 84/97 (86%)
 Strand = Plus / Minus

                                                                       
Query: 226 catcagcaccaccagatgagttgagggcattgagccgctctacgagactggccttcctct 285
           ||||||||||| | || |||||||| ||||| |  |  || |||||||||||||||||||
Sbjct: 886 catcagcaccagcggaggagttgagagcattcaatctttcgacgagactggccttcctct 827

                                                
Query: 286 gctcgtaggtcagcttcttgggattgtacctcttgtg 322
           |||||||||||||||||||| | ||||| ||||||||
Sbjct: 826 gctcgtaggtcagcttcttgaggttgtatctcttgtg 790

>gb|BT016492.1| Zea mays clone Contig325 mRNA sequence
          Length = 1365

 Score = 87.7 bits (44), Expect = 2e-14
 Identities = 59/64 (92%)
 Strand = Plus / Minus

                                                                       
Query: 269 gagactggccttcctctgctcgtaggtcagcttcttgggattgtacctcttgtgcgtctt 328
           |||||||||||||||||||||||| ||||| |||||||| |||||||||||||||  |||
Sbjct: 902 gagactggccttcctctgctcgtatgtcagtttcttggggttgtacctcttgtgctcctt 843

               
Query: 329 tggt 332
           ||||
Sbjct: 842 tggt 839

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 79.8 bits (40), Expect = 5e-12
 Identities = 70/80 (87%)
 Strand = Plus / Minus

                                                                            
Query: 226      catcagcaccaccagatgagttgagggcattgagccgctctacgagactggccttcctct 285
                ||||||||||| | || |||||||| ||||| |  |  || |||||||||||||||||||
Sbjct: 38964058 catcagcaccagcggaggagttgagagcattcaatctttcgacgagactggccttcctct 38963999

                                    
Query: 286      gctcgtaggtcagcttcttg 305
                ||||||||||||||||||||
Sbjct: 38963998 gctcgtaggtcagcttcttg 38963979



 Score = 63.9 bits (32), Expect = 3e-07
 Identities = 68/80 (85%)
 Strand = Plus / Minus

                                                                            
Query: 226      catcagcaccaccagatgagttgagggcattgagccgctctacgagactggccttcctct 285
                ||||||||||| |||| |||||||| ||||| |  |  || || ||||||||||||||||
Sbjct: 38969388 catcagcaccagcagaggagttgagagcattcaatctttcgacaagactggccttcctct 38969329

                                    
Query: 286      gctcgtaggtcagcttcttg 305
                | |||||||| |||||||||
Sbjct: 38969328 gttcgtaggttagcttcttg 38969309

>dbj|AP003349.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0674H09
          Length = 142955

 Score = 79.8 bits (40), Expect = 5e-12
 Identities = 70/80 (87%)
 Strand = Plus / Minus

                                                                         
Query: 226   catcagcaccaccagatgagttgagggcattgagccgctctacgagactggccttcctct 285
             ||||||||||| | || |||||||| ||||| |  |  || |||||||||||||||||||
Sbjct: 37691 catcagcaccagcggaggagttgagagcattcaatctttcgacgagactggccttcctct 37632

                                 
Query: 286   gctcgtaggtcagcttcttg 305
             ||||||||||||||||||||
Sbjct: 37631 gctcgtaggtcagcttcttg 37612



 Score = 63.9 bits (32), Expect = 3e-07
 Identities = 68/80 (85%)
 Strand = Plus / Minus

                                                                         
Query: 226   catcagcaccaccagatgagttgagggcattgagccgctctacgagactggccttcctct 285
             ||||||||||| |||| |||||||| ||||| |  |  || || ||||||||||||||||
Sbjct: 43021 catcagcaccagcagaggagttgagagcattcaatctttcgacaagactggccttcctct 42962

                                 
Query: 286   gctcgtaggtcagcttcttg 305
             | |||||||| |||||||||
Sbjct: 42961 gttcgtaggttagcttcttg 42942

>dbj|AP003316.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0696G06
          Length = 142571

 Score = 79.8 bits (40), Expect = 5e-12
 Identities = 70/80 (87%)
 Strand = Plus / Minus

                                                                          
Query: 226    catcagcaccaccagatgagttgagggcattgagccgctctacgagactggccttcctct 285
              ||||||||||| | || |||||||| ||||| |  |  || |||||||||||||||||||
Sbjct: 128844 catcagcaccagcggaggagttgagagcattcaatctttcgacgagactggccttcctct 128785

                                  
Query: 286    gctcgtaggtcagcttcttg 305
              ||||||||||||||||||||
Sbjct: 128784 gctcgtaggtcagcttcttg 128765



 Score = 63.9 bits (32), Expect = 3e-07
 Identities = 68/80 (85%)
 Strand = Plus / Minus

                                                                          
Query: 226    catcagcaccaccagatgagttgagggcattgagccgctctacgagactggccttcctct 285
              ||||||||||| |||| |||||||| ||||| |  |  || || ||||||||||||||||
Sbjct: 134174 catcagcaccagcagaggagttgagagcattcaatctttcgacaagactggccttcctct 134115

                                  
Query: 286    gctcgtaggtcagcttcttg 305
              | |||||||| |||||||||
Sbjct: 134114 gttcgtaggttagcttcttg 134095

>gb|BT016417.1| Zea mays clone Contig250 mRNA sequence
          Length = 1212

 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 90/107 (84%)
 Strand = Plus / Minus

                                                                       
Query: 226 catcagcaccaccagatgagttgagggcattgagccgctctacgagactggccttcctct 285
           ||||||||||||| || ||||||||    |||||||  || | ||| |||||||||||||
Sbjct: 960 catcagcaccaccggaggagttgagttggttgagcctttcaatgaggctggccttcctct 901

                                                          
Query: 286 gctcgtaggtcagcttcttgggattgtacctcttgtgcgtctttggt 332
           |||| || |||||||||||||| ||||||||||| |||  |||||||
Sbjct: 900 gctcatatgtcagcttcttggggttgtacctcttatgctcctttggt 854

>ref|NM_190270.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 906

 Score = 73.8 bits (37), Expect = 3e-10
 Identities = 82/97 (84%)
 Strand = Plus / Minus

                                                                       
Query: 226 catcagcaccaccagatgagttgagggcattgagccgctctacgagactggccttcctct 285
           ||||||||||| |||| |||||||| ||||| |  |  || || ||||||||||||||||
Sbjct: 877 catcagcaccagcagaggagttgagagcattcaatctttcgacaagactggccttcctct 818

                                                
Query: 286 gctcgtaggtcagcttcttgggattgtacctcttgtg 322
           | |||||||| ||||||||| | ||||| ||||||||
Sbjct: 817 gttcgtaggttagcttcttgaggttgtatctcttgtg 781

>emb|X64622.1|OS5SRRNMR O.sativa Rrl5 mRNA for 5S ribosomal RNA
          Length = 1114

 Score = 73.8 bits (37), Expect = 3e-10
 Identities = 82/97 (84%)
 Strand = Plus / Minus

                                                                       
Query: 226 catcagcaccaccagatgagttgagggcattgagccgctctacgagactggccttcctct 285
           ||||||||||| |||| |||||||| ||||| |  |  || || ||||||||||||||||
Sbjct: 887 catcagcaccagcagaggagttgagagcattcaatctttcgacaagactggccttcctct 828

                                                
Query: 286 gctcgtaggtcagcttcttgggattgtacctcttgtg 322
           | |||||||| ||||||||| | ||||| ||||||||
Sbjct: 827 gttcgtaggttagcttcttgaggttgtatctcttgtg 791

>dbj|AK104693.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-036-H05, full
           insert sequence
          Length = 1219

 Score = 73.8 bits (37), Expect = 3e-10
 Identities = 82/97 (84%)
 Strand = Plus / Minus

                                                                       
Query: 226 catcagcaccaccagatgagttgagggcattgagccgctctacgagactggccttcctct 285
           ||||||||||| |||| |||||||| ||||| |  |  || || ||||||||||||||||
Sbjct: 973 catcagcaccagcagaggagttgagagcattcaatctttcgacaagactggccttcctct 914

                                                
Query: 286 gctcgtaggtcagcttcttgggattgtacctcttgtg 322
           | |||||||| ||||||||| | ||||| ||||||||
Sbjct: 913 gttcgtaggttagcttcttgaggttgtatctcttgtg 877

>gb|AY109375.1| Zea mays CL457_2 mRNA sequence
          Length = 1397

 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 54/60 (90%)
 Strand = Plus / Minus

                                                                       
Query: 273 ctggccttcctctgctcgtaggtcagcttcttgggattgtacctcttgtgcgtctttggt 332
           ||||||||||||||||| || |||||||||||||| ||||||||||| |||  |||||||
Sbjct: 914 ctggccttcctctgctcatatgtcagcttcttggggttgtacctcttatgctcctttggt 855

>dbj|AK065268.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002K21, full
           insert sequence
          Length = 1219

 Score = 65.9 bits (33), Expect = 8e-08
 Identities = 48/53 (90%)
 Strand = Plus / Minus

                                                                
Query: 270 agactggccttcctctgctcgtaggtcagcttcttgggattgtacctcttgtg 322
           ||||||||||||||||| |||||||| ||||||||| | ||||| ||||||||
Sbjct: 930 agactggccttcctctgttcgtaggttagcttcttgaggttgtatctcttgtg 878

>gb|BT014015.1| Lycopersicon esculentum clone 133077F, mRNA sequence
          Length = 1274

 Score = 46.1 bits (23), Expect = 0.071
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                              
Query: 294 gtcagcttcttgggattgtacctcttgtgcgtctt 328
           |||||||||||  ||||||||||||||||| ||||
Sbjct: 926 gtcagcttcttcagattgtacctcttgtgcttctt 892

>emb|CT030195.12| Mouse DNA sequence from clone RP23-191J8 on chromosome 13, complete
              sequence
          Length = 219800

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                            
Query: 46     cagaacggtactcaaaaccaagggggcagg 75
              ||||| || |||||||||||||||||||||
Sbjct: 138517 cagaatgggactcaaaaccaagggggcagg 138546

>dbj|AB001583.1| Solanum melongena mRNA for ribosomal protein L5, partial cds
          Length = 399

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                 
Query: 291 taggtcagcttcttgggattgtacctcttgtgcgtctt 328
           ||||||||||||||  | |||||||||||||| |||||
Sbjct: 276 taggtcagcttcttaaggttgtacctcttgtgtgtctt 239

>ref|XM_657651.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN5139.2), mRNA
          Length = 3624

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 199  actctcattcatcgtcgtcttcatc 223
            ||||||||||||| |||||||||||
Sbjct: 3164 actctcattcatcttcgtcttcatc 3188

>emb|BX649413.8| Mouse DNA sequence from clone RP23-193P21 on chromosome 4 Contains the
             5' end of the Dbccr1 gene for deleted in bladder cancer 1,
             complete sequence
          Length = 186197

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 28    taagataatccagaactccag 48
             |||||||||||||||||||||
Sbjct: 81236 taagataatccagaactccag 81216

>ref|XM_638845.1| Dictyostelium discoideum hypothetical protein (DDB0217483), partial
            mRNA
          Length = 4395

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 207  tcatcgtcgtcttcatcgacatca 230
            ||||| ||||||||||||||||||
Sbjct: 1936 tcatcatcgtcttcatcgacatca 1959

>gb|AC091455.12| Mus musculus chromosome 1, clone RP23-23O9, complete sequence
          Length = 257924

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 269   gagactggccttcctctgct 288
             ||||||||||||||||||||
Sbjct: 17640 gagactggccttcctctgct 17621

>gb|BC049636.1| Mus musculus mitchondrial ribosomal protein S7, mRNA (cDNA clone
            MGC:58388 IMAGE:6532964), complete cds
          Length = 1355

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 97   aacttgagcaaaaatgcctctcac 120
            ||||||||||||| ||||||||||
Sbjct: 1121 aacttgagcaaaactgcctctcac 1144

>ref|NM_025305.1| Mus musculus mitchondrial ribosomal protein S7 (Mrps7), mRNA
          Length = 1355

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 97   aacttgagcaaaaatgcctctcac 120
            ||||||||||||| ||||||||||
Sbjct: 1121 aacttgagcaaaactgcctctcac 1144

>ref|XM_545753.2| PREDICTED: Canis familiaris similar to Sodium/potassium-transporting
            ATPase alpha-2 chain precursor (Sodium pump 2) (Na+/K+
            ATPase 2), transcript variant 1 (LOC488636), mRNA
          Length = 3039

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 277  ccttcctctgctcgtaggtc 296
            ||||||||||||||||||||
Sbjct: 2815 ccttcctctgctcgtaggtc 2796

>ref|XM_855596.1| PREDICTED: Canis familiaris similar to Sodium/potassium-transporting
            ATPase alpha-2 chain precursor (Sodium pump 2) (Na+/K+
            ATPase 2), transcript variant 2 (LOC488636), mRNA
          Length = 2949

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 277  ccttcctctgctcgtaggtc 296
            ||||||||||||||||||||
Sbjct: 2833 ccttcctctgctcgtaggtc 2814

>emb|Z81045.1|CEC36F7 Caenorhabditis elegans Cosmid C36F7, complete sequence
          Length = 39211

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 207  tcatcgtcgtcttcatcgacatca 230
            |||||||||||||||||| |||||
Sbjct: 1300 tcatcgtcgtcttcatcgtcatca 1323

>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome
          Length = 4892717

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 254     attgagccgctctacgagac 273
               ||||||||||||||||||||
Sbjct: 4242294 attgagccgctctacgagac 4242313

>gb|AC130456.2| Homo sapiens chromosome 16 clone CTA-363E6, complete sequence
          Length = 220579

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 161    aagcatgaagacagcactat 180
              ||||||||||||||||||||
Sbjct: 133716 aagcatgaagacagcactat 133697

>emb|AL121776.19|HSJ1050K3 Human DNA sequence from clone RP5-1050K3 on chromosome 20 Contains part
             of the EYA2 gene for eyes absent homolog 2 (Drosophila), a
             glyceraldehyde 3-phosphate dehydrogenase (GAPDH)
             pseudogene and an RPL27A (ribosomal protein L27A)
             pseudogene, complete sequence
          Length = 143981

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 26    tttaagataatccagaactccaga 49
             |||||||||| |||||||||||||
Sbjct: 56872 tttaagataaaccagaactccaga 56849

>gb|AC162866.5| Mus musculus chromosome 1, clone RP23-90B23, complete sequence
          Length = 230597

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 269   gagactggccttcctctgct 288
             ||||||||||||||||||||
Sbjct: 56125 gagactggccttcctctgct 56144

>dbj|AK126270.1| Homo sapiens cDNA FLJ44282 fis, clone TRACH2003516
          Length = 2555

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 161  aagcatgaagacagcactat 180
            ||||||||||||||||||||
Sbjct: 1586 aagcatgaagacagcactat 1567

>dbj|AK162024.1| Mus musculus 12 days embryo female mullerian duct includes
            surrounding region cDNA, RIKEN full-length enriched
            library, clone:6820413L12 product:mitchondrial ribosomal
            protein S7, full insert sequence
          Length = 1715

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 97   aacttgagcaaaaatgcctctcac 120
            ||||||||||||| ||||||||||
Sbjct: 1100 aacttgagcaaaactgcctctcac 1123

>dbj|AK009251.1| Mus musculus adult male tongue cDNA, RIKEN full-length enriched
            library, clone:2310009G03 product:mitchondrial ribosomal
            protein S7, full insert sequence
          Length = 1288

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 97   aacttgagcaaaaatgcctctcac 120
            ||||||||||||| ||||||||||
Sbjct: 1086 aacttgagcaaaactgcctctcac 1109

>ref|NM_060132.2| Caenorhabditis elegans IRoquois subclass of homeoboX family member
           (irx-1) (irx-1) mRNA, complete cds
          Length = 1150

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 207 tcatcgtcgtcttcatcgacatca 230
           |||||||||||||||||| |||||
Sbjct: 675 tcatcgtcgtcttcatcgtcatca 652

>ref|NM_178099.2| Danio rerio ATPase, Na+/K+ transporting, alpha 1a.5 polypeptide
            (atp1a1a.5), mRNA
          Length = 3838

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 277  ccttcctctgctcgtaggtc 296
            ||||||||||||||||||||
Sbjct: 2810 ccttcctctgctcgtaggtc 2791

>gb|AC116986.2| Dictyostelium discoideum chromosome 2 map 2234041-2567370 strain AX4,
              complete sequence
          Length = 333321

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 207    tcatcgtcgtcttcatcgacatca 230
              ||||| ||||||||||||||||||
Sbjct: 171756 tcatcatcgtcttcatcgacatca 171779

>gb|AC084452.1|AC084452 Caenorhabditis briggsae cosmid CB024D21, complete sequence
          Length = 93590

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 211   cgtcgtcttcatcgacatca 230
             ||||||||||||||||||||
Sbjct: 76007 cgtcgtcttcatcgacatca 76026

>gb|AY094620.1| Danio rerio Na+/K+ ATPase alpha subunit isoform 9 (atp1a1a.5) mRNA,
            complete cds
          Length = 3838

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 277  ccttcctctgctcgtaggtc 296
            ||||||||||||||||||||
Sbjct: 2810 ccttcctctgctcgtaggtc 2791

>gb|U91321.1|HUU91321 Human Chromosome 16 BAC clone CIT987SK-A-363E6, complete sequence
          Length = 220633

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 161    aagcatgaagacagcactat 180
              ||||||||||||||||||||
Sbjct: 133766 aagcatgaagacagcactat 133747

>gb|DQ203519.1| Uncultured bacterium clone MedHO1-20-2-C3 predicted
          proteorhodopsin gene, partial cds
          Length = 324

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 26 tttaagataatccagaactc 45
          ||||||||||||||||||||
Sbjct: 62 tttaagataatccagaactc 43

>emb|AL645470.20| Mouse DNA sequence from clone RP23-392H19 on chromosome 11, complete
             sequence
          Length = 198031

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 97    aacttgagcaaaaatgcctctcac 120
             ||||||||||||| ||||||||||
Sbjct: 17403 aacttgagcaaaactgcctctcac 17380


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,662,572
Number of Sequences: 3902068
Number of extensions: 2662572
Number of successful extensions: 54608
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 54514
Number of HSP's gapped (non-prelim): 83
length of query: 332
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 310
effective length of database: 17,147,199,772
effective search space: 5315631929320
effective search space used: 5315631929320
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)