Clone Name | rbart23f06 |
---|---|
Clone Library Name | barley_pub |
>NFAC1_MOUSE (O88942) Nuclear factor of activated T-cells, cytoplasmic 1 (NFAT| transcription complex cytosolic component) (NF-ATc1) (NF-ATc) Length = 717 Score = 31.2 bits (69), Expect = 1.4 Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 1/61 (1%) Frame = +3 Query: 291 DPSTMKVASQISSSSAGTAVTLF-LGFSYDLRPPRAFQ*KQPCGKGASDLPQDPFSRSMS 467 DPS + AS +SS S + + + +SY P+ + PC + P++ F RS+ Sbjct: 169 DPSCLSPASSLSSRSCNSEASSYESNYSYPYASPQTSPWQSPCVSPKTTDPEEGFPRSLG 228 Query: 468 S 470 + Sbjct: 229 A 229
>NFAC1_PIG (O77638) Nuclear factor of activated T-cells, cytoplasmic 1 (NFAT| transcription complex cytosolic component) (NF-ATc1) (NF-ATc) (NFATmac) Length = 822 Score = 30.8 bits (68), Expect = 1.8 Identities = 17/61 (27%), Positives = 29/61 (47%), Gaps = 1/61 (1%) Frame = +3 Query: 291 DPSTMKVASQISSSSAGTAVTLF-LGFSYDLRPPRAFQ*KQPCGKGASDLPQDPFSRSMS 467 DPS + AS +SS S + + + FSY P+ + PC + P++ F R + Sbjct: 159 DPSCLSPASSLSSRSCNSEASSYESSFSYPYASPQTSPWQSPCVSPKTTDPEEGFPRGLG 218 Query: 468 S 470 + Sbjct: 219 A 219
>NFAC1_HUMAN (O95644) Nuclear factor of activated T-cells, cytoplasmic 1 (NFAT| transcription complex cytosolic component) (NF-ATc1) (NF-ATc) Length = 943 Score = 29.6 bits (65), Expect = 4.1 Identities = 16/61 (26%), Positives = 29/61 (47%), Gaps = 1/61 (1%) Frame = +3 Query: 291 DPSTMKVASQISSSSAGTAVTLF-LGFSYDLRPPRAFQ*KQPCGKGASDLPQDPFSRSMS 467 DPS + AS +SS S + + + +SY P+ + PC + P++ F R + Sbjct: 167 DPSCLSPASSLSSRSCNSEASSYESNYSYPYASPQTSPWQSPCVSPKTTDPEEGFPRGLG 226 Query: 468 S 470 + Sbjct: 227 A 227
>PROP_CAVPO (Q64181) Properdin precursor (Factor P)| Length = 470 Score = 29.6 bits (65), Expect = 4.1 Identities = 19/62 (30%), Positives = 26/62 (41%) Frame = -3 Query: 242 GQSRQHRSCVGGGGVI*CNKARVLLSLVILWELFGCVSDHLYL*LFKFSQWIQDRPFSVE 63 G +HR C+G GG NKA L W+L C + +S W P +V Sbjct: 95 GSQLRHRRCIGWGGQCSENKAPGTLE----WQLQACEEQQCCPEMGGWSNWEPWGPCTVT 150 Query: 62 CN 57 C+ Sbjct: 151 CS 152
>LAC1_CRYPA (Q03966) Laccase precursor (EC 1.10.3.2) (Benzenediol:oxygen| oxidoreductase) (Urishiol oxidase) Length = 591 Score = 28.9 bits (63), Expect = 6.9 Identities = 17/41 (41%), Positives = 21/41 (51%) Frame = -1 Query: 448 GSCGKSLAPFPQGCFYWNALGGLKSYENPKNKVTAVPADEE 326 G CGKS P+P ++N S +P NK A PAD E Sbjct: 330 GFCGKSNNPYPAAIIHYNG----ASNSHPTNKGVA-PADHE 365
>PROP_MOUSE (P11680) Properdin precursor (Factor P)| Length = 464 Score = 28.5 bits (62), Expect = 9.1 Identities = 21/68 (30%), Positives = 28/68 (41%) Frame = -3 Query: 260 SLVSVAGQSRQHRSCVGGGGVI*CNKARVLLSLVILWELFGCVSDHLYL*LFKFSQWIQD 81 S+ G +HR CVG GG N A L W+L C + +S+W Sbjct: 86 SVTCSEGSQLRHRRCVGRGGQCSENVAPGTLE----WQLQACEDQPCCPEMGGWSEWGPW 141 Query: 80 RPFSVECN 57 P SV C+ Sbjct: 142 GPCSVTCS 149 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 62,644,047 Number of Sequences: 219361 Number of extensions: 1124877 Number of successful extensions: 3083 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 2984 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3083 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3072927439 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)