ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart23f06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|L28008.1|WHTWALI Triticum aestivum (wali7) mRNA, 3' end, part... 688 0.0
2gb|AY106409.1| Zea mays PCO130569 mRNA sequence 141 2e-30
3gb|BT017472.1| Zea mays clone EL01N0408D08.c mRNA sequence 125 1e-25
4gb|AY104105.1| Zea mays PCO130572 mRNA sequence 125 1e-25
5gb|BT016691.1| Zea mays clone Contig524 mRNA sequence 121 2e-24
6dbj|AK119185.1| Oryza sativa (japonica cultivar-group) cDNA clon... 105 1e-19
7dbj|AK104445.1| Oryza sativa (japonica cultivar-group) cDNA clon... 105 1e-19
8dbj|AK071762.1| Oryza sativa (japonica cultivar-group) cDNA clon... 105 1e-19
9dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 64 4e-07
10dbj|AK067141.1| Oryza sativa (japonica cultivar-group) cDNA clon... 64 4e-07
11gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 64 4e-07
12emb|BX000499.1|CNS08CDP Oryza sativa chromosome 11, . BAC OSJNBa... 64 4e-07
13dbj|AK104347.1| Oryza sativa (japonica cultivar-group) cDNA clon... 56 1e-04
14dbj|AK104102.1| Oryza sativa (japonica cultivar-group) cDNA clon... 56 1e-04
15gb|AC025674.10| Homo sapiens chromosome 8, clone RP11-513O17, co... 44 0.41
16gb|AC010894.10| Homo sapiens BAC clone RP11-483E17 from 2, compl... 44 0.41
17gb|AC011284.3| Homo sapiens BAC clone CTD-2326L19 from 7, comple... 42 1.6
18gb|AC142336.1| Pan troglodytes BAC clone RP43-39E5 from 7, compl... 42 1.6
19gb|AC007271.4| Homo sapiens BAC clone RP11-4B12 from 2, complete... 42 1.6
20gb|AC129093.34| Mus musculus strain C57BL/6J clone rp23-198m10 m... 40 6.4
21gb|AC150310.1| Latimeria menadoensis clone VMRC4-40C18, complete... 40 6.4
22gb|AC103380.13| Mus musculus chromosome 1, clone RP24-263A16, co... 40 6.4
23gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, comple... 40 6.4
24gb|AC021016.5| Homo sapiens BAC clone RP11-378A13 from 2, comple... 40 6.4
25gb|AC117662.13| Mus musculus chromosome 16, clone RP23-351D19, c... 40 6.4
26emb|CT010426.3| Mouse DNA sequence from clone RP23-17A17 on chro... 40 6.4
27gb|AC122815.3| Mus musculus BAC clone RP23-234O3 from chromosome... 40 6.4
28gb|AC131722.4| Mus musculus BAC clone RP23-143M5 from chromosome... 40 6.4
29gb|AC118608.7| Mus musculus chromosome 17, clone RP23-478J10, co... 40 6.4
30gb|AY680783.1| Dionysia gaubae isolate 213 ribosomal protein S16... 40 6.4
31gb|AC153359.4| Mus musculus BAC clone RP23-477I1 from chromosome... 40 6.4
32gb|AC130814.3| Homo sapiens BAC clone RP11-599B8 from 2, complet... 40 6.4
33gb|AF229163.1|AF229163 Homo sapiens natural resistance-associate... 40 6.4
34gb|AC092594.2| Homo sapiens BAC clone RP11-78J22 from 2, complet... 40 6.4
35dbj|BA000019.2| Nostoc sp. PCC 7120 DNA, complete genome 40 6.4
36gb|AC151833.3| Mus musculus BAC clone RP23-374P15 from 14, compl... 40 6.4
37emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome 40 6.4
38gb|AC138308.3| Mus musculus BAC clone RP23-286G16 from 14, compl... 40 6.4
39gb|AC122846.4| Mus musculus BAC clone RP23-156M18 from 19, compl... 40 6.4
40gb|AC099701.4| Mus musculus chromosome 7, clone RP23-184F6, comp... 40 6.4
41emb|AL772389.10| Mouse DNA sequence from clone RP23-106D7 on chr... 40 6.4
42gb|AC138106.9| Mus musculus chromosome 1, clone RP23-278C19, com... 40 6.4
43dbj|AB012110.1| Vigna radiata mRNA for ARG10, complete cds 40 6.4 
>gb|L28008.1|WHTWALI Triticum aestivum (wali7) mRNA, 3' end, partial cds
          Length = 956

 Score =  688 bits (347), Expect = 0.0
 Identities = 423/445 (95%), Gaps = 5/445 (1%)
 Strand = Plus / Minus

                                                                       
Query: 28  gaaagcttatttgctactacattataattgttacattcaactgaaaacggccggtcttga 87
           |||||||||||||||||| |||||  |||||||||| |||||||| ||||||||||||||
Sbjct: 943 gaaagcttatttgctactgcatta--attgttacatccaactgaagacggccggtcttga 886

                                                                       
Query: 88  atccactgcgagaatttgaagagctagagatacagatgatcagatacacaaccgaacagt 147
           |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 885 atccactgcgagaatttgaacagctagagatacagatgatcagatacacaaccgaacagt 826

                                                                       
Query: 148 tcccataagatcacaagagagagtagcacacgcgccttgttgcattatattacaccacca 207
           || ||||||||||||||||||  |||||||||||||||||||||||||||||||||||||
Sbjct: 825 tcacataagatcacaagagag--tagcacacgcgccttgttgcattatattacaccacca 768

                                                                       
Query: 208 ccacctacacacgaccggtgttgcctgctttgcccagcgacggagacgagagaatctcct 267
           ||| |||||||||| ||| |||||||||||||||||||||| |||||| |||||||||||
Sbjct: 767 ccatctacacacgaacggcgttgcctgctttgcccagcgacagagacgggagaatctcct 708

                                                                       
Query: 268 actgaagtgccgcgagaacggtagatccttccaccatgaaggttgcatcacagatttcct 327
           ||||||||||||||| ||||||||||||||||||||||||||| ||| |||| |||||||
Sbjct: 707 actgaagtgccgcgacaacggtagatccttccaccatgaaggt-gcaccacatatttcct 649

                                                                       
Query: 328 cctcatctgcaggcacagcggtcaccttgttcttgggattctcgtacgacttgaggcctc 387
           |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 648 cctcatctgcaggcacagcggtgaccttgttcttgggattctcgtacgacttgaggcctc 589

                                                                       
Query: 388 caagggcgttccagtagaagcagccttgcgggaaaggcgccagtgatttgccgcaagatc 447
           |||| ||||||||||||||||| ||||||||||||||||||||||| |||||||||||||
Sbjct: 588 caagagcgttccagtagaagcaaccttgcgggaaaggcgccagtgacttgccgcaagatc 529

                                    
Query: 448 ctttcagcaggtcgatgtcgtcgga 472
           |||||||||||||||||||||||||
Sbjct: 528 ctttcagcaggtcgatgtcgtcgga 504
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>gb|AY106409.1| Zea mays PCO130569 mRNA sequence
          Length = 1186

 Score =  141 bits (71), Expect = 2e-30
 Identities = 152/179 (84%)
 Strand = Plus / Minus

                                                                       
Query: 294 ccttccaccatgaaggttgcatcacagatttcctcctcatctgcaggcacagcggtcacc 353
           |||||||||  |||||||||  | |||||||||||||| | |||||| || || ||||| 
Sbjct: 768 ccttccacctggaaggttgcgccgcagatttcctcctcgtttgcaggaacggcagtcact 709

                                                                       
Query: 354 ttgttcttgggattctcgtacgacttgaggcctccaagggcgttccagtagaagcagcct 413
           ||||||||||||||||||||  |||| |  ||||||||||| ||  |||||||||| |||
Sbjct: 708 ttgttcttgggattctcgtagcacttcaatcctccaagggcattagagtagaagcaacct 649

                                                                      
Query: 414 tgcgggaaaggcgccagtgatttgccgcaagatcctttcagcaggtcgatgtcgtcgga 472
           |||||||||||||| || || |||||||| || ||||| |||| |||||||||||||||
Sbjct: 648 tgcgggaaaggcgcgagggacttgccgcaggagcctttgagcacgtcgatgtcgtcgga 590
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>gb|BT017472.1| Zea mays clone EL01N0408D08.c mRNA sequence
          Length = 1157

 Score =  125 bits (63), Expect = 1e-25
 Identities = 114/131 (87%)
 Strand = Plus / Minus

                                                                       
Query: 342 acagcggtcaccttgttcttgggattctcgtacgacttgaggcctccaagggcgttccag 401
           |||||||| ||||||| |||||| ||||||||  ||||||| ||||| ||||||||  ||
Sbjct: 744 acagcggtgaccttgtgcttggggttctcgtagcacttgagccctccgagggcgttggag 685

                                                                       
Query: 402 tagaagcagccttgcgggaaaggcgccagtgatttgccgcaagatcctttcagcaggtcg 461
           |||||||||||||||||||| ||||| || || |||||||| || ||||| |||| ||||
Sbjct: 684 tagaagcagccttgcgggaacggcgcgagcgacttgccgcatgagcctttgagcatgtcg 625

                      
Query: 462 atgtcgtcgga 472
           |||||||||||
Sbjct: 624 atgtcgtcgga 614
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>gb|AY104105.1| Zea mays PCO130572 mRNA sequence
          Length = 1280

 Score =  125 bits (63), Expect = 1e-25
 Identities = 114/131 (87%)
 Strand = Plus / Minus

                                                                       
Query: 342 acagcggtcaccttgttcttgggattctcgtacgacttgaggcctccaagggcgttccag 401
           |||||||| ||||||| |||||| ||||||||  ||||||| ||||| ||||||||  ||
Sbjct: 734 acagcggtgaccttgtgcttggggttctcgtagcacttgagccctccgagggcgttggag 675

                                                                       
Query: 402 tagaagcagccttgcgggaaaggcgccagtgatttgccgcaagatcctttcagcaggtcg 461
           |||||||||||||||||||| ||||| || || |||||||| || ||||| |||| ||||
Sbjct: 674 tagaagcagccttgcgggaacggcgcgagcgacttgccgcatgagcctttgagcatgtcg 615

                      
Query: 462 atgtcgtcgga 472
           |||||||||||
Sbjct: 614 atgtcgtcgga 604
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>gb|BT016691.1| Zea mays clone Contig524 mRNA sequence
          Length = 1198

 Score =  121 bits (61), Expect = 2e-24
 Identities = 154/185 (83%)
 Strand = Plus / Plus

                                                                       
Query: 288 gtagatccttccaccatgaaggttgcatcacagatttcctcctcatctgcaggcacagcg 347
           |||| ||||||||||  ||||| |||  | || ||||||||||| | |||||| || || 
Sbjct: 419 gtagctccttccacctggaagggtgcgccgcaaatttcctcctcgtttgcaggaacggca 478

                                                                       
Query: 348 gtcaccttgttcttgggattctcgtacgacttgaggcctccaagggcgttccagtagaag 407
           ||||| ||||||||||||||||||||  |||| |  ||||||||||| ||  ||||||||
Sbjct: 479 gtcactttgttcttgggattctcgtagcacttcaatcctccaagggcattagagtagaag 538

                                                                       
Query: 408 cagccttgcgggaaaggcgccagtgatttgccgcaagatcctttcagcaggtcgatgtcg 467
           || || |||||||||||||| || || |||||||| || ||||| |||| ||||||||||
Sbjct: 539 caaccctgcgggaaaggcgcgagggacttgccgcaggagcctttgagcacgtcgatgtcg 598

                
Query: 468 tcgga 472
           |||||
Sbjct: 599 tcgga 603
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>dbj|AK119185.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-039-G04, full
           insert sequence
          Length = 1135

 Score =  105 bits (53), Expect = 1e-19
 Identities = 137/165 (83%)
 Strand = Plus / Minus

                                                                       
Query: 304 tgaaggttgcatcacagatttcctcctcatctgcaggcacagcggtcaccttgttcttgg 363
           ||||||||||| ||||||| || || |||| |||||| ||||| |||||||||||||| |
Sbjct: 887 tgaaggttgcaccacagatctcttcttcatttgcaggaacagcagtcaccttgttctttg 828

                                                                       
Query: 364 gattctcgtacgacttgaggcctccaagggcgttccagtagaagcagccttgcgggaaag 423
           | ||||| ||  |||| | ||||||||| || ||  | |||||||| ||||| |||||||
Sbjct: 827 ggttctcatagcacttcaagcctccaagagcattggaatagaagcaaccttgtgggaaag 768

                                                        
Query: 424 gcgccagtgatttgccgcaagatcctttcagcaggtcgatgtcgt 468
           | || ||||| ||||| || |||||||| |||||||| |||||||
Sbjct: 767 gtgcaagtgacttgccacatgatcctttaagcaggtcaatgtcgt 723
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>dbj|AK104445.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-211-B05, full
           insert sequence
          Length = 1124

 Score =  105 bits (53), Expect = 1e-19
 Identities = 137/165 (83%)
 Strand = Plus / Minus

                                                                       
Query: 304 tgaaggttgcatcacagatttcctcctcatctgcaggcacagcggtcaccttgttcttgg 363
           ||||||||||| ||||||| || || |||| |||||| ||||| |||||||||||||| |
Sbjct: 887 tgaaggttgcaccacagatctcttcttcatttgcaggaacagcagtcaccttgttctttg 828

                                                                       
Query: 364 gattctcgtacgacttgaggcctccaagggcgttccagtagaagcagccttgcgggaaag 423
           | ||||| ||  |||| | ||||||||| || ||  | |||||||| ||||| |||||||
Sbjct: 827 ggttctcatagcacttcaagcctccaagagcattggaatagaagcaaccttgtgggaaag 768

                                                        
Query: 424 gcgccagtgatttgccgcaagatcctttcagcaggtcgatgtcgt 468
           | || ||||| ||||| || |||||||| |||||||| |||||||
Sbjct: 767 gtgcaagtgacttgccacatgatcctttaagcaggtcaatgtcgt 723
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>dbj|AK071762.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023109H06, full
           insert sequence
          Length = 1136

 Score =  105 bits (53), Expect = 1e-19
 Identities = 137/165 (83%)
 Strand = Plus / Minus

                                                                       
Query: 304 tgaaggttgcatcacagatttcctcctcatctgcaggcacagcggtcaccttgttcttgg 363
           ||||||||||| ||||||| || || |||| |||||| ||||| |||||||||||||| |
Sbjct: 888 tgaaggttgcaccacagatctcttcttcatttgcaggaacagcagtcaccttgttctttg 829

                                                                       
Query: 364 gattctcgtacgacttgaggcctccaagggcgttccagtagaagcagccttgcgggaaag 423
           | ||||| ||  |||| | ||||||||| || ||  | |||||||| ||||| |||||||
Sbjct: 828 ggttctcatagcacttcaagcctccaagagcattggaatagaagcaaccttgtgggaaag 769

                                                        
Query: 424 gcgccagtgatttgccgcaagatcctttcagcaggtcgatgtcgt 468
           | || ||||| ||||| || |||||||| |||||||| |||||||
Sbjct: 768 gtgcaagtgacttgccacatgatcctttaagcaggtcaatgtcgt 724
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 74/88 (84%)
 Strand = Plus / Plus

                                                                           
Query: 304     tgaaggttgcatcacagatttcctcctcatctgcaggcacagcggtcaccttgttcttgg 363
               ||||||||||| ||||||| || || |||| |||||| ||||| |||||||||||||| |
Sbjct: 2187475 tgaaggttgcaccacagatctcttcttcatttgcaggaacagcagtcaccttgttctttg 2187534

                                           
Query: 364     gattctcgtacgacttgaggcctccaag 391
               | ||||| ||  |||| | |||||||||
Sbjct: 2187535 ggttctcatagcacttcaagcctccaag 2187562
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>dbj|AK067141.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013095J21, full
           insert sequence
          Length = 1130

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 56/64 (87%)
 Strand = Plus / Minus

                                                                       
Query: 402 tagaagcagccttgcgggaaaggcgccagtgatttgccgcaagatcctttcagcaggtcg 461
           |||||||||||||| |||||||| || || || ||||| || |||||||| |||||||||
Sbjct: 750 tagaagcagccttgtgggaaaggtgcaagagacttgccacacgatcctttaagcaggtcg 691

               
Query: 462 atgt 465
           ||||
Sbjct: 690 atgt 687



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 69/83 (83%)
 Strand = Plus / Minus

                                                                       
Query: 288 gtagatccttccaccatgaaggttgcatcacagatttcctcctcatctgcaggcacagcg 347
           ||||||||||||||| ||||||||||| | || ||||| || || |  ||||| || |||
Sbjct: 870 gtagatccttccaccttgaaggttgcaccgcaaatttcttcttctttggcaggaactgcg 811

                                  
Query: 348 gtcaccttgttcttgggattctc 370
           |||||||||| ||| || |||||
Sbjct: 810 gtcaccttgtgctttgggttctc 788
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 74/88 (84%)
 Strand = Plus / Plus

                                                                           
Query: 304     tgaaggttgcatcacagatttcctcctcatctgcaggcacagcggtcaccttgttcttgg 363
               ||||||||||| ||||||| || || |||| |||||| ||||| |||||||||||||| |
Sbjct: 2195256 tgaaggttgcaccacagatctcttcttcatttgcaggaacagcagtcaccttgttctttg 2195315

                                           
Query: 364     gattctcgtacgacttgaggcctccaag 391
               | ||||| ||  |||| | |||||||||
Sbjct: 2195316 ggttctcatagcacttcaagcctccaag 2195343
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>emb|BX000499.1|CNS08CDP Oryza sativa chromosome 11, . BAC OSJNBa0039D03 of library OSJNBa from
             chromosome 11 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 125593

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 74/88 (84%)
 Strand = Plus / Plus

                                                                         
Query: 304   tgaaggttgcatcacagatttcctcctcatctgcaggcacagcggtcaccttgttcttgg 363
             ||||||||||| ||||||| || || |||| |||||| ||||| |||||||||||||| |
Sbjct: 84169 tgaaggttgcaccacagatctcttcttcatttgcaggaacagcagtcaccttgttctttg 84228

                                         
Query: 364   gattctcgtacgacttgaggcctccaag 391
             | ||||| ||  |||| | |||||||||
Sbjct: 84229 ggttctcatagcacttcaagcctccaag 84256
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>dbj|AK104347.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-F10, full
           insert sequence
          Length = 1101

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 55/64 (85%)
 Strand = Plus / Minus

                                                                       
Query: 402 tagaagcagccttgcgggaaaggcgccagtgatttgccgcaagatcctttcagcaggtcg 461
           |||||||||||||| |||||||| || || || ||||| || |||||||| |||||||| 
Sbjct: 737 tagaagcagccttgtgggaaaggtgcaagagacttgccacacgatcctttaagcaggtca 678

               
Query: 462 atgt 465
           ||||
Sbjct: 677 atgt 674



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 69/83 (83%)
 Strand = Plus / Minus

                                                                       
Query: 288 gtagatccttccaccatgaaggttgcatcacagatttcctcctcatctgcaggcacagcg 347
           ||||||||||||||| ||||||||||| | || ||||| || || |  ||||| || |||
Sbjct: 857 gtagatccttccaccttgaaggttgcaccgcaaatttcttcttctttggcaggaactgcg 798

                                  
Query: 348 gtcaccttgttcttgggattctc 370
           |||||||||| ||| || |||||
Sbjct: 797 gtcaccttgtgctttgggttctc 775
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>dbj|AK104102.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-202-B06, full
           insert sequence
          Length = 1099

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 55/64 (85%)
 Strand = Plus / Minus

                                                                       
Query: 402 tagaagcagccttgcgggaaaggcgccagtgatttgccgcaagatcctttcagcaggtcg 461
           |||||||||||||| |||||||| || || || ||||| || |||||||| |||||||| 
Sbjct: 749 tagaagcagccttgtgggaaaggtgcaagagacttgccacacgatcctttaagcaggtca 690

               
Query: 462 atgt 465
           ||||
Sbjct: 689 atgt 686



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 69/83 (83%)
 Strand = Plus / Minus

                                                                       
Query: 288 gtagatccttccaccatgaaggttgcatcacagatttcctcctcatctgcaggcacagcg 347
           ||||||||||||||| ||||||||||| | || ||||| || || |  ||||| || |||
Sbjct: 869 gtagatccttccaccttgaaggttgcaccgcaaatttcttcttctttggcaggaactgcg 810

                                  
Query: 348 gtcaccttgttcttgggattctc 370
           |||||||||| ||| || |||||
Sbjct: 809 gtcaccttgtgctttgggttctc 787
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>gb|AC025674.10| Homo sapiens chromosome 8, clone RP11-513O17, complete sequence
          Length = 152451

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 101   atttgaagagctagagatacag 122
             ||||||||||||||||||||||
Sbjct: 75017 atttgaagagctagagatacag 75038
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>gb|AC010894.10| Homo sapiens BAC clone RP11-483E17 from 2, complete sequence
          Length = 181663

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 10    ttcttttagatggagaaggaaa 31
             ||||||||||||||||||||||
Sbjct: 25284 ttcttttagatggagaaggaaa 25305
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>gb|AC011284.3| Homo sapiens BAC clone CTD-2326L19 from 7, complete sequence
          Length = 92959

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 103   ttgaagagctagagatacaga 123
             |||||||||||||||||||||
Sbjct: 59521 ttgaagagctagagatacaga 59541
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>gb|AC142336.1| Pan troglodytes BAC clone RP43-39E5 from 7, complete sequence
          Length = 75539

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 103   ttgaagagctagagatacaga 123
             |||||||||||||||||||||
Sbjct: 47729 ttgaagagctagagatacaga 47709
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>gb|AC007271.4| Homo sapiens BAC clone RP11-4B12 from 2, complete sequence
          Length = 179954

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 46    acattataattgttacattca 66
             |||||||||||||||||||||
Sbjct: 88020 acattataattgttacattca 88000
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>gb|AC129093.34| Mus musculus strain C57BL/6J clone rp23-198m10 map 19, complete
             sequence
          Length = 190697

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 107   agagctagagatacagatga 126
             ||||||||||||||||||||
Sbjct: 35605 agagctagagatacagatga 35586
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>gb|AC150310.1| Latimeria menadoensis clone VMRC4-40C18, complete sequence
          Length = 170774

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 45    tacattataattgttacattcaactgaaaacg 76
             ||||||||||||  |||||| |||||||||||
Sbjct: 13870 tacattataattaatacattgaactgaaaacg 13901
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>gb|AC103380.13| Mus musculus chromosome 1, clone RP24-263A16, complete sequence
          Length = 173136

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 107   agagctagagatacagatga 126
             ||||||||||||||||||||
Sbjct: 16259 agagctagagatacagatga 16278
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>gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, complete sequence
          Length = 6365727

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 10      ttcttttagatggagaaggaaagc 33
               |||||| |||||||||||||||||
Sbjct: 4088128 ttctttaagatggagaaggaaagc 4088151
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>gb|AC021016.5| Homo sapiens BAC clone RP11-378A13 from 2, complete sequence
          Length = 191755

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 200    caccaccaccacctacacac 219
              ||||||||||||||||||||
Sbjct: 153105 caccaccaccacctacacac 153124
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>gb|AC117662.13| Mus musculus chromosome 16, clone RP23-351D19, complete sequence
          Length = 293822

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 200    caccaccaccacctacacac 219
              ||||||||||||||||||||
Sbjct: 167383 caccaccaccacctacacac 167364
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>emb|CT010426.3| Mouse DNA sequence from clone RP23-17A17 on chromosome 17, complete
             sequence
          Length = 221525

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 200   caccaccaccacctacacac 219
             ||||||||||||||||||||
Sbjct: 94535 caccaccaccacctacacac 94554
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>gb|AC122815.3| Mus musculus BAC clone RP23-234O3 from chromosome 2, complete sequence
          Length = 176452

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 24     gaaggaaagcttatttgcta 43
              ||||||||||||||||||||
Sbjct: 105241 gaaggaaagcttatttgcta 105260
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>gb|AC131722.4| Mus musculus BAC clone RP23-143M5 from chromosome 9, complete sequence
          Length = 228144

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 108    gagctagagatacagatgat 127
              ||||||||||||||||||||
Sbjct: 164138 gagctagagatacagatgat 164119
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>gb|AC118608.7| Mus musculus chromosome 17, clone RP23-478J10, complete sequence
          Length = 196566

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 200   caccaccaccacctacacac 219
             ||||||||||||||||||||
Sbjct: 19345 caccaccaccacctacacac 19364
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>gb|AY680783.1| Dionysia gaubae isolate 213 ribosomal protein S16 (rps16) gene,
           intron; chloroplast
          Length = 784

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 3   ataaattttcttttagatggagaa 26
           |||||||||||||||||| |||||
Sbjct: 228 ataaattttcttttagattgagaa 205
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>gb|AC153359.4| Mus musculus BAC clone RP23-477I1 from chromosome 9, complete sequence
          Length = 195269

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 108    gagctagagatacagatgat 127
              ||||||||||||||||||||
Sbjct: 168771 gagctagagatacagatgat 168790
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>gb|AC130814.3| Homo sapiens BAC clone RP11-599B8 from 2, complete sequence
          Length = 129660

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 26   aggaaagcttatttgctact 45
            ||||||||||||||||||||
Sbjct: 7147 aggaaagcttatttgctact 7128
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>gb|AF229163.1|AF229163 Homo sapiens natural resistance-associated macrophage protein 1
             (SLC11A1) gene, complete cds, alternatively spliced; and
             nuclear LIM interactor-interacting factor (NLI-IF) gene,
             complete cds
          Length = 32198

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 200   caccaccaccacctacacac 219
             ||||||||||||||||||||
Sbjct: 31094 caccaccaccacctacacac 31113
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>gb|AC092594.2| Homo sapiens BAC clone RP11-78J22 from 2, complete sequence
          Length = 159471

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 26  aggaaagcttatttgctact 45
           ||||||||||||||||||||
Sbjct: 928 aggaaagcttatttgctact 909
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>dbj|BA000019.2| Nostoc sp. PCC 7120 DNA, complete genome
          Length = 6413771

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 10      ttcttttagatggagaaggaaagc 33
               |||||| |||||||||||||||||
Sbjct: 5274094 ttctttaagatggagaaggaaagc 5274071
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>gb|AC151833.3| Mus musculus BAC clone RP23-374P15 from 14, complete sequence
          Length = 197918

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 24    gaaggaaagcttatttgcta 43
             ||||||||||||||||||||
Sbjct: 37432 gaaggaaagcttatttgcta 37451
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>emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome
          Length = 2595221

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 452    cagcaggtcgatgtcgtcgg 471
              ||||||||||||||||||||
Sbjct: 969612 cagcaggtcgatgtcgtcgg 969631
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>gb|AC138308.3| Mus musculus BAC clone RP23-286G16 from 14, complete sequence
          Length = 148679

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 24     gaaggaaagcttatttgcta 43
              ||||||||||||||||||||
Sbjct: 111508 gaaggaaagcttatttgcta 111527
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>gb|AC122846.4| Mus musculus BAC clone RP23-156M18 from 19, complete sequence
          Length = 217949

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 24     gaaggaaagcttatttgcta 43
              ||||||||||||||||||||
Sbjct: 134693 gaaggaaagcttatttgcta 134674
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>gb|AC099701.4| Mus musculus chromosome 7, clone RP23-184F6, complete sequence
          Length = 226167

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 18     gatggagaaggaaagcttat 37
              ||||||||||||||||||||
Sbjct: 171373 gatggagaaggaaagcttat 171392
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>emb|AL772389.10| Mouse DNA sequence from clone RP23-106D7 on chromosome 2, complete
             sequence
          Length = 211326

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 24    gaaggaaagcttatttgcta 43
             ||||||||||||||||||||
Sbjct: 22595 gaaggaaagcttatttgcta 22576
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>gb|AC138106.9| Mus musculus chromosome 1, clone RP23-278C19, complete sequence
          Length = 173026

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 107    agagctagagatacagatga 126
              ||||||||||||||||||||
Sbjct: 103588 agagctagagatacagatga 103607
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>dbj|AB012110.1| Vigna radiata mRNA for ARG10, complete cds
          Length = 959

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 65/80 (81%)
 Strand = Plus / Minus

                                                                       
Query: 291 gatccttccaccatgaaggttgcatcacagatttcctcctcatctgcaggcacagcggtc 350
           ||||| |||||| | || |||||| | ||||||||||| || || ||||| || || || 
Sbjct: 726 gatccctccaccttaaaagttgcaccccagatttcctcttcttcggcaggtactgcagta 667

                               
Query: 351 accttgttcttgggattctc 370
           | ||||||||| ||||||||
Sbjct: 666 atcttgttctttggattctc 647


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,589,196
Number of Sequences: 3902068
Number of extensions: 4589196
Number of successful extensions: 102458
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 102227
Number of HSP's gapped (non-prelim): 228
length of query: 472
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 450
effective length of database: 17,147,199,772
effective search space: 7716239897400
effective search space used: 7716239897400
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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