Clone Name | rbart23f04 |
---|---|
Clone Library Name | barley_pub |
>GSTX1_TOBAC (Q03662) Probable glutathione S-transferase (EC 2.5.1.18)| (Auxin-induced protein PGNT1/PCNT110) Length = 223 Score = 37.4 bits (85), Expect = 0.024 Identities = 16/37 (43%), Positives = 22/37 (59%) Frame = -1 Query: 509 VFEEMAGVQLLTEEAHPALCRWAREYRADETVRQCLP 399 VFEE +GV L+T E P C+W EY +++ LP Sbjct: 163 VFEEASGVVLVTSEKFPNFCKWRGEYINCSQIKESLP 199
>GSTX6_SOYBN (P32110) Probable glutathione S-transferase (EC 2.5.1.18) (Heat| shock protein 26A) (G2-4) Length = 225 Score = 37.0 bits (84), Expect = 0.031 Identities = 15/37 (40%), Positives = 24/37 (64%) Frame = -1 Query: 509 VFEEMAGVQLLTEEAHPALCRWAREYRADETVRQCLP 399 +F+E+AG+QL T E P L +W++E+ V + LP Sbjct: 169 IFQEIAGLQLFTSEKFPILYKWSQEFLNHPFVHEVLP 205
>GLSA_STRCO (P57755) Glutaminase (EC 3.5.1.2)| Length = 307 Score = 33.5 bits (75), Expect = 0.34 Identities = 29/108 (26%), Positives = 49/108 (45%), Gaps = 3/108 (2%) Frame = +1 Query: 148 HFNENSKL*HRLLSF*SIDDPLPICIDMYT*P*FRQP*RVRHGDKHIYPLTHHEMSYFCA 327 H + N+ L H + S+ +ID+P+P+ +D Y FRQ ++ CA Sbjct: 164 HGDRNAALAHFMASYGNIDNPVPVLLDQY----FRQ----------------CSVAASCA 203 Query: 328 AMALAMET*RSFLA---AKAASTRALSGRHCRTVSSALYSLAQRQSAG 462 +ALA FLA +A TR LS + +++ + + +AG Sbjct: 204 DLALA----TGFLARHGIRADGTRLLSRSRAKQINAVMLTCGTYDAAG 247
>GSTX3_TOBAC (Q03664) Probable glutathione S-transferase (EC 2.5.1.18)| (Auxin-induced protein PCNT103) Length = 223 Score = 33.1 bits (74), Expect = 0.45 Identities = 17/37 (45%), Positives = 20/37 (54%) Frame = -1 Query: 509 VFEEMAGVQLLTEEAHPALCRWAREYRADETVRQCLP 399 VFEE GV L+T E P RW EY V++ LP Sbjct: 163 VFEEGYGVVLVTSEKFPNFSRWRDEYINCSQVKESLP 199
>GSTXA_ARATH (P46421) Glutathione S-transferase 103-1A (EC 2.5.1.18)| Length = 224 Score = 32.3 bits (72), Expect = 0.77 Identities = 13/34 (38%), Positives = 19/34 (55%) Frame = -1 Query: 500 EMAGVQLLTEEAHPALCRWAREYRADETVRQCLP 399 E G++++TEE P RW R E V+ C+P Sbjct: 172 EGIGLEVITEEKFPEFKRWVRNLEKVEIVKDCVP 205
>DUT_MYCTU (P0A552) Deoxyuridine 5'-triphosphate nucleotidohydrolase (EC| 3.6.1.23) (dUTPase) (dUTP pyrophosphatase) Length = 154 Score = 31.6 bits (70), Expect = 1.3 Identities = 18/41 (43%), Positives = 23/41 (56%) Frame = +3 Query: 348 DIEVLPGRQGSQHAGPVREALPHGLVGPVLPRPAAERRVRL 470 D+E+ PGR+ G V A+P G+VG V PR RV L Sbjct: 34 DVELAPGRRALVRTG-VAVAVPFGMVGLVHPRSGLATRVGL 73
>DUT_MYCBO (P0A553) Deoxyuridine 5'-triphosphate nucleotidohydrolase (EC| 3.6.1.23) (dUTPase) (dUTP pyrophosphatase) Length = 154 Score = 31.6 bits (70), Expect = 1.3 Identities = 18/41 (43%), Positives = 23/41 (56%) Frame = +3 Query: 348 DIEVLPGRQGSQHAGPVREALPHGLVGPVLPRPAAERRVRL 470 D+E+ PGR+ G V A+P G+VG V PR RV L Sbjct: 34 DVELAPGRRALVRTG-VAVAVPFGMVGLVHPRSGLATRVGL 73
>HEY1_HUMAN (Q9Y5J3) Hairy/enhancer-of-split related with YRPW motif 1 (Hairy| and enhancer of split related 1) (HESR-1) (Cardiovascular helix-loop-helix factor 2) (HES-related repressor protein 2) (HERP2) Length = 304 Score = 30.8 bits (68), Expect = 2.2 Identities = 21/49 (42%), Positives = 23/49 (46%), Gaps = 7/49 (14%) Frame = +3 Query: 315 LLLCSHGLGNGDIEVLP------GRQGSQHA-GPVREALPHGLVGPVLP 440 LLL +G GN P GR GS H P A P G +GPVLP Sbjct: 194 LLLPQNGHGNAGTTASPTEPHHQGRLGSAHPEAPALRAPPSGSLGPVLP 242
>VGLG_HHV2H (P13290) Glycoprotein G| Length = 699 Score = 30.4 bits (67), Expect = 2.9 Identities = 15/49 (30%), Positives = 24/49 (48%), Gaps = 3/49 (6%) Frame = +3 Query: 363 PGRQGSQHAGPVREALPHGLVGPV---LPRPAAERRVRLLGEQLHPGHL 500 P + GP+R LP G++GP+ PRP A+ + + P H+ Sbjct: 589 PNKPPPARPGPIRPTLPPGILGPLAPNTPRPPAQAPAKDMPSGPTPQHI 637
>MYF5_XENLA (P24700) Myogenic factor 5 (Myf-5)| Length = 255 Score = 30.4 bits (67), Expect = 2.9 Identities = 18/43 (41%), Positives = 24/43 (55%) Frame = +2 Query: 161 IQSCNTDFFLFSPSMIHFPYASTCIHSPDFGSLDEYATATSIY 289 + SC+ FSPS F Y S+CI SP+ G ++Y SIY Sbjct: 4 VDSCH-----FSPS--EFFYDSSCIPSPEEGYTEDYEHGMSIY 39
>PGBM_HUMAN (P98160) Basement membrane-specific heparan sulfate proteoglycan core| protein precursor (HSPG) (Perlecan) (PLC) Length = 4391 Score = 29.3 bits (64), Expect = 6.5 Identities = 13/26 (50%), Positives = 13/26 (50%) Frame = -3 Query: 396 QGPRAGCLGGQEGPLCLHCQGHGCTE 319 QG R CL G GP C GHG E Sbjct: 4160 QGTRCLCLPGFSGPRCQQGSGHGIAE 4185
>DUT_MYCPA (P61910) Deoxyuridine 5'-triphosphate nucleotidohydrolase (EC| 3.6.1.23) (dUTPase) (dUTP pyrophosphatase) Length = 154 Score = 29.3 bits (64), Expect = 6.5 Identities = 17/41 (41%), Positives = 22/41 (53%) Frame = +3 Query: 348 DIEVLPGRQGSQHAGPVREALPHGLVGPVLPRPAAERRVRL 470 D+ + PGR+ G V A+P G+VG V PR RV L Sbjct: 34 DVRLEPGRRALVRTG-VAVAIPFGMVGLVHPRSGLAARVGL 73
>ICP4_HHV11 (P08392) Trans-acting transcriptional protein ICP4 (Transcriptional| activator IE175) (Alpha-4 protein) Length = 1298 Score = 29.3 bits (64), Expect = 6.5 Identities = 14/35 (40%), Positives = 19/35 (54%) Frame = +3 Query: 342 NGDIEVLPGRQGSQHAGPVREALPHGLVGPVLPRP 446 +GD+ +PG G++ A P R P G GP P P Sbjct: 584 DGDLAAVPGLAGARPASPPR---PEGPAGPASPPP 615
>GR65_HUMAN (Q9BQQ3) Golgi reassembly-stacking protein 1 (Golgi| reassembly-stacking protein of 65 kDa) (GRASP65) (Golgi peripheral membrane protein p65) (Golgi phosphoprotein 5) (GOLPH5) Length = 439 Score = 29.3 bits (64), Expect = 6.5 Identities = 13/40 (32%), Positives = 20/40 (50%) Frame = +3 Query: 339 GNGDIEVLPGRQGSQHAGPVREALPHGLVGPVLPRPAAER 458 G+ + LPG H+ P + LPH + P+ P P +R Sbjct: 261 GSSMEDPLPGPGSPSHSAPDPDGLPHFMETPLQPPPPVQR 300
>YGR5_YEAST (P53106) Hypothetical 21.9 kDa protein in ACE1-RAD54 intergenic| region Length = 192 Score = 28.9 bits (63), Expect = 8.5 Identities = 13/23 (56%), Positives = 16/23 (69%) Frame = -2 Query: 376 PWRPGRTSMSPLPRPWLHRSSSF 308 P+RP RTS S +PRP +SSF Sbjct: 152 PFRPKRTSRSAIPRPLTCAASSF 174
>TRI37_MOUSE (Q6PCX9) Tripartite motif protein 37| Length = 961 Score = 28.9 bits (63), Expect = 8.5 Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 6/39 (15%) Frame = +3 Query: 345 GDIEVLP------GRQGSQHAGPVREALPHGLVGPVLPR 443 GD +VL + GS+H+ P AL HG++G +LP+ Sbjct: 787 GDCQVLAEGSSGSSQSGSRHSSP--RALTHGIIGDLLPK 823
>PDLI2_MACFA (Q9GKU1) PDZ and LIM domain protein 2| Length = 352 Score = 28.9 bits (63), Expect = 8.5 Identities = 20/47 (42%), Positives = 21/47 (44%) Frame = +3 Query: 318 LLCSHGLGNGDIEVLPGRQGSQHAGPVREALPHGLVGPVLPRPAAER 458 L CS GL D GR GSQ AG R LV P P P + R Sbjct: 158 LACSPGLPAADRLSYSGRPGSQQAGLGRAGDSAVLVLPPSPGPRSSR 204
>ELA1_BOVIN (Q28153) Elastase-1 precursor (EC 3.4.21.36) (Elastase I)| Length = 266 Score = 28.9 bits (63), Expect = 8.5 Identities = 22/65 (33%), Positives = 27/65 (41%) Frame = -3 Query: 399 GQGPRAGCLGGQEGPLCLHCQGHGCTEVAHFMMSKGIYMLVAVAYSSRLPKSGLCIHVDA 220 G G RAGC G GP LHC +G V G+ V+ + K + V A Sbjct: 203 GDGVRAGCQGDSGGP--LHCLVNGQYAV------HGVTSFVSSLGCNVSKKPTVFTRVSA 254 Query: 219 YGKWI 205 Y WI Sbjct: 255 YISWI 259 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 72,838,487 Number of Sequences: 219361 Number of extensions: 1539112 Number of successful extensions: 5259 Number of sequences better than 10.0: 18 Number of HSP's better than 10.0 without gapping: 4951 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5256 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3754426130 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)