Clone Name | rbart23e11 |
---|---|
Clone Library Name | barley_pub |
>CSK2A_MAIZE (P28523) Casein kinase II subunit alpha (EC 2.7.11.1) (CK II)| (CK2-alpha) Length = 332 Score = 38.1 bits (87), Expect = 0.005 Identities = 17/19 (89%), Positives = 17/19 (89%) Frame = -1 Query: 361 MAHPYFLQVRAAENSRTRA 305 M HPYF QVRAAENSRTRA Sbjct: 314 MTHPYFQQVRAAENSRTRA 332
>CSK22_ARATH (Q08466) Casein kinase II subunit alpha-2 (EC 2.7.11.1) (CK II)| Length = 333 Score = 36.2 bits (82), Expect = 0.020 Identities = 16/20 (80%), Positives = 17/20 (85%) Frame = -1 Query: 361 MAHPYFLQVRAAENSRTRAQ 302 MAHPYF QVRAAE+SR R Q Sbjct: 314 MAHPYFAQVRAAESSRMRTQ 333
>CSK21_ARATH (Q08467) Casein kinase II subunit alpha-1 (EC 2.7.11.1) (CK II)| Length = 333 Score = 33.1 bits (74), Expect = 0.17 Identities = 15/20 (75%), Positives = 16/20 (80%) Frame = -1 Query: 361 MAHPYFLQVRAAENSRTRAQ 302 MAH YF QVRAAE SR R+Q Sbjct: 314 MAHAYFAQVRAAETSRMRSQ 333
>CSK23_ARATH (O64817) Probable casein kinase II subunit alpha (EC 2.7.11.1) (CK| II) Length = 333 Score = 32.7 bits (73), Expect = 0.22 Identities = 14/20 (70%), Positives = 16/20 (80%) Frame = -1 Query: 361 MAHPYFLQVRAAENSRTRAQ 302 M HPYF QV+AAE+SR R Q Sbjct: 314 MDHPYFAQVKAAESSRLRTQ 333
>BACB_BACLI (O68007) Bacitracin synthetase 2 (BA2) [Includes: ATP-dependent| lysine adenylase (LysA) (Lysine activase); ATP-dependent D-ornithine adenylase (D-OrnA) (D-ornithine activase); Ornithine racemase (EC 5.1.1.12)] Length = 2607 Score = 29.6 bits (65), Expect = 1.9 Identities = 11/37 (29%), Positives = 22/37 (59%) Frame = +2 Query: 95 SINQVSIHKQQEQITVLFPLDDRGTHHTGSYLSQLIQ 205 ++N +S+ ++E+ TVL+ +D T H S+L + Sbjct: 1521 TLNDISMLSEEERHTVLYQFNDTNTEHPSGIFSELFE 1557
>PPID_CRYNE (Q5KFV5) Peptidyl-prolyl cis-trans isomerase D (EC 5.2.1.8) (PPIase| D) (Rotamase D) Length = 375 Score = 28.5 bits (62), Expect = 4.2 Identities = 18/64 (28%), Positives = 30/64 (46%), Gaps = 6/64 (9%) Frame = +3 Query: 24 KDILYKQSRTILPNTLHEKWVANFQSIRFPYTNNKSKSQFFSP------STIEAHTTQAL 185 K + Y +LPN + V +F+S+R P N + P S + + T++AL Sbjct: 242 KALRYLDVHPVLPNDSPAELVESFRSLRLPLLTNAALCALKLPASPNTSSLVVSLTSRAL 301 Query: 186 TFPS 197 T P+ Sbjct: 302 TLPN 305
>PSBC_SYNP7 (P11004) Photosystem II 44 kDa reaction center protein (P6 protein)| (CP43) Length = 461 Score = 28.1 bits (61), Expect = 5.5 Identities = 12/26 (46%), Positives = 15/26 (57%) Frame = +3 Query: 114 YTNNKSKSQFFSPSTIEAHTTQALTF 191 Y N S+FF P+ EA +QA TF Sbjct: 280 YNNTVYPSEFFGPTAAEASQSQAFTF 305 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 48,718,086 Number of Sequences: 219361 Number of extensions: 849825 Number of successful extensions: 2452 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 2409 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2452 length of database: 80,573,946 effective HSP length: 95 effective length of database: 59,734,651 effective search space used: 1433631624 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)