>dbj|AB052133.1| Triticum aestivum tck2a mRNA for casein kinase II alpha, complete cds
          Length = 1531

 Score =  502 bits (253), Expect = e-139
 Identities = 333/357 (93%), Gaps = 2/357 (0%)
 Strand = Plus / Minus

                                                                        
Query: 6    aatccaaagcaacttaacaaagatattctttacaagcagagtcgtacaatattaccgaac 65
            |||||||||||| ||| ||||||||||||||||||||||||||||||||| ||||| |||
Sbjct: 1479 aatccaaagcaatttaccaaagatattctttacaagcagagtcgtacaatgttaccaaac 1420

                                                                        
Query: 66   acgttacatgaaaagtgggttgcgaactttcaatcaatcaggtttccatacacaaacaac 125
            |||||||||||||||||  ||||||| |||||||||||||||||||||||||||||||||
Sbjct: 1419 acgttacatgaaaagtgt-ttgcgaagtttcaatcaatcaggtttccatacacaaacaac 1361

                                                                        
Query: 126  aagagcaaatcacagttcttttccccctcgacgat-agaggcacacaccacacaggctct 184
            | |||||||||||||||||||||| ||||| |||| ||||||||||||||||||||||||
Sbjct: 1360 aggagcaaatcacagttcttttccgcctcgtcgatgagaggcacacaccacacaggctct 1301

                                                                        
Query: 185  tacctttcccagctgatccaaccattatcgagttgtaatacgtgacaaagtcgctacaag 244
            |||||||||||||||| ||||||||||||||||  |||||| ||||||||||||||||||
Sbjct: 1300 tacctttcccagctgacccaaccattatcgagtcataatacatgacaaagtcgctacaag 1241

                                                                        
Query: 245  gatgcggcttcatcacgcgctgctcattcaatgtcagcaacagtcctgctattgctattg 304
            ||||| ||||| ||| ||||||||| ||||||||||||||||||| ||||||||||||||
Sbjct: 1240 gatgcagcttcgtcaagcgctgctcgttcaatgtcagcaacagtcttgctattgctattg 1181

                                                                     
Query: 305  cgcgcgagtcctgctgttttcagcggccctcacctgcaggaagtatggatgtgccat 361
            ||| ||||||||||||||||| || ||||||||||| ||||||||||||||||||||
Sbjct: 1180 cgcacgagtcctgctgttttcggcagccctcacctggaggaagtatggatgtgccat 1124

>dbj|AB213317.1| Lolium perenne Lpck2a-2 mRNA for casein protein kinase 2 alpha
            subunit, complete cds
          Length = 1472

 Score =  117 bits (59), Expect = 3e-23
 Identities = 119/139 (85%)
 Strand = Plus / Minus

                                                                        
Query: 6    aatccaaagcaacttaacaaagatattctttacaagcagagtcgtacaatattaccgaac 65
            |||||||| ||| | | ||||||||||||||||||||||| || ||||||| |||| |||
Sbjct: 1452 aatccaaaccaattcaccaaagatattctttacaagcagactcatacaatagtaccaaac 1393

                                                                        
Query: 66   acgttacatgaaaagtgggttgcgaactttcaatcaatcaggtttccatacacaaacaac 125
            | |||||||||| | || ||||| ||||| |||| ||||||||| ||| |||||||||| 
Sbjct: 1392 aagttacatgaataatgtgttgcaaacttgcaattaatcaggttaccacacacaaacaag 1333

                               
Query: 126  aagagcaaatcacagttct 144
            | ||| |||||||||||||
Sbjct: 1332 aggagtaaatcacagttct 1314



 Score = 97.6 bits (49), Expect = 2e-17
 Identities = 74/81 (91%), Gaps = 1/81 (1%)
 Strand = Plus / Minus

                                                                        
Query: 282  caacagtcctgctattgct-attgcgcgcgagtcctgctgttttcagcggccctcacctg 340
            |||||||| |||||||||| | || || ||||||||||||||||| ||||||||||||||
Sbjct: 1174 caacagtcttgctattgcttactgtgcacgagtcctgctgttttctgcggccctcacctg 1115

                                 
Query: 341  caggaagtatggatgtgccat 361
             ||||||||||||||||||||
Sbjct: 1114 gaggaagtatggatgtgccat 1094



 Score = 81.8 bits (41), Expect = 1e-12
 Identities = 59/65 (90%)
 Strand = Plus / Minus

                                                                        
Query: 194  cagctgatccaaccattatcgagttgtaatacgtgacaaagtcgctacaaggatgcggct 253
            |||||||||||||||||||||||||| ||||| |||| ||||||| | ||||| ||||||
Sbjct: 1263 cagctgatccaaccattatcgagttgaaatacatgaccaagtcgccaaaaggaagcggct 1204

                 
Query: 254  tcatc 258
            |||||
Sbjct: 1203 tcatc 1199

>gb|AF517838.1| Lilium davidii CK2 catalytic alpha subunit mRNA, complete cds
          Length = 1480

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 43/49 (87%)
 Strand = Plus / Minus

                                                             
Query: 309  cgagtcctgctgttttcagcggccctcacctgcaggaagtatggatgtg 357
            |||||||||||||| || || || |||||||| ||||| ||||||||||
Sbjct: 1129 cgagtcctgctgttctctgctgctctcacctgaaggaaatatggatgtg 1081

>emb|AJ567830.1|GMA567830 Gigaspora margarita partial act gene for actin, exons 1-4, isolate
           UY278.9_spore2
          Length = 925

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                             
Query: 4   aaaatccaaagcaacttaacaaagatattcttta 37
           ||||||||||||||| |||||||| | |||||||
Sbjct: 494 aaaatccaaagcaacataacaaagtttttcttta 461

>emb|AJ567829.1|GMA567829 Gigaspora margarita partial act gene for actin, exons 1-4, isolate
           UY278.9_spore1
          Length = 925

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                             
Query: 4   aaaatccaaagcaacttaacaaagatattcttta 37
           ||||||||||||||| |||||||| | |||||||
Sbjct: 494 aaaatccaaagcaacataacaaagtttttcttta 461

>emb|AM039459.1| Hanseniaspora vineae partial act1 gene for actin, strain CBS 2171
          Length = 1023

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                            
Query: 5   aaatccaaagcaacttaacaaagatattcttta 37
           |||||||||||||| |||||||| | |||||||
Sbjct: 587 aaatccaaagcaacgtaacaaagtttttcttta 555

>gb|AC092981.3| Homo sapiens 3 BAC RP11-305I9 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 160000

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 107    gtttccatacacaaacaacaa 127
              |||||||||||||||||||||
Sbjct: 138753 gtttccatacacaaacaacaa 138773

>gb|AC109211.10| Mus musculus chromosome 8, clone RP23-27N18, complete sequence
          Length = 212670

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 107   gtttccatacacaaacaacaa 127
             |||||||||||||||||||||
Sbjct: 54298 gtttccatacacaaacaacaa 54278

>emb|BX248229.14| Zebrafish DNA sequence from clone CH211-126P4 in linkage group 2,
             complete sequence
          Length = 180233

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 10    caaagcaacttaacaaagatattct 34
             ||||||| |||||||||||||||||
Sbjct: 68777 caaagcagcttaacaaagatattct 68753

>gb|AY382677.1| Lycopersicon esculentum CTR1-like protein kinase (CTR4) gene, complete
             cds
          Length = 14530

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 9     ccaaagcaacttaacaaaga 28
             ||||||||||||||||||||
Sbjct: 12638 ccaaagcaacttaacaaaga 12619

>gb|AY686597.1| Drosophila virilis Dscam gene, exons 3 through 16 and partial cds,
             alternatively spliced
          Length = 43940

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 50    tacaatattaccgaacacgttaca 73
             ||||||||| ||||||||||||||
Sbjct: 43795 tacaatatttccgaacacgttaca 43818

>gb|AE016827.1| Mannheimia succiniciproducens MBEL55E, complete genome
          Length = 2314078

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 19     ttaacaaagatattctttac 38
              ||||||||||||||||||||
Sbjct: 258386 ttaacaaagatattctttac 258405

>gb|AC112945.9| Mus musculus chromosome 15, clone RP23-382O21, complete sequence
          Length = 189335

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 105    aggtttccatacacaaacaa 124
              ||||||||||||||||||||
Sbjct: 179197 aggtttccatacacaaacaa 179178

>gb|AC166334.8| Mus musculus chromosome 7, clone RP23-470P9, complete sequence
          Length = 171861

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 114   tacacaaacaacaagagcaaatca 137
             |||||||||| |||||||||||||
Sbjct: 97430 tacacaaacagcaagagcaaatca 97453

>gb|AC119382.7| Rattus norvegicus 4 BAC CH230-125G2 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 189442

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 12    aagcaacttaacaaagatat 31
             ||||||||||||||||||||
Sbjct: 40581 aagcaacttaacaaagatat 40600

>gb|AC157552.10| Mus musculus chromosome 7, clone RP23-89C10, complete sequence
          Length = 195587

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 114  tacacaaacaacaagagcaaatca 137
            |||||||||| |||||||||||||
Sbjct: 6871 tacacaaacagcaagagcaaatca 6894

>gb|AC113269.13| Mus musculus chromosome 15, clone RP23-372F2, complete sequence
          Length = 202155

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 105   aggtttccatacacaaacaa 124
             ||||||||||||||||||||
Sbjct: 51950 aggtttccatacacaaacaa 51931

>gb|AC008581.11| Homo sapiens chromosome 5 clone CTC-564N23, complete sequence
          Length = 198564

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 28     atattctttacaagcagagt 47
              ||||||||||||||||||||
Sbjct: 178664 atattctttacaagcagagt 178683

>emb|AL161614.16| Human DNA sequence from clone RP11-346L13 on chromosome 13q14.3-21.31
             Contains the 5'end of the MRPS31 gene for mitochondrial
             ribosomal protein S31, the SLC25A15 gene for solute
             carrier family 25 (mitochondrial carrier; ornithine
             transporter) member 15 (ORNT1), TPTE and PTEN homologous
             inositol lipid phosphatase (TPIP) pseudogene and 2 CpG
             islands, complete sequence
          Length = 70946

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 1     cttaaaatccaaagcaactt 20
             ||||||||||||||||||||
Sbjct: 22441 cttaaaatccaaagcaactt 22422

>emb|AL158072.9| Human DNA sequence from clone RP11-30O14 on chromosome 9p21.1-21.3,
              complete sequence
          Length = 200840

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 1      cttaaaatccaaagcaacttaaca 24
              ||||||||| ||||||||||||||
Sbjct: 126998 cttaaaatcaaaagcaacttaaca 127021

>dbj|AB213316.1| Lolium perenne Lpck2a-1 mRNA for casein protein kinase 2 alpha
            subunit, complete cds
          Length = 1629

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 41/48 (85%)
 Strand = Plus / Minus

                                                            
Query: 314  cctgctgttttcagcggccctcacctgcaggaagtatggatgtgccat 361
            |||||||||||| || ||  |||| || |||||||||||||| |||||
Sbjct: 1225 cctgctgttttccgctgctttcacttggaggaagtatggatgcgccat 1178

>gb|AC133589.24| Mus musculus chromosome 1, clone RP24-475M18, complete sequence
          Length = 167647

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 9     ccaaagcaacttaacaaaga 28
             ||||||||||||||||||||
Sbjct: 42006 ccaaagcaacttaacaaaga 41987

>gb|AC092415.3| Homo sapiens chromosome 3 clone RP11-9A14, complete sequence
          Length = 181664

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 164    ggcacacaccacacaggctc 183
              ||||||||||||||||||||
Sbjct: 147455 ggcacacaccacacaggctc 147474


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,150,293
Number of Sequences: 3902068
Number of extensions: 3150293
Number of successful extensions: 60319
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 60268
Number of HSP's gapped (non-prelim): 49
length of query: 361
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 339
effective length of database: 17,147,199,772
effective search space: 5812900722708
effective search space used: 5812900722708
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)