ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart23e05 |
|---|---|
| Clone Library Name | barley_pub |
>ECX1_METTH (O26779) Probable exosome complex exonuclease 1 (EC 3.1.13.-)| Length = 240 Score = 73.9 bits (180), Expect = 2e-13 Identities = 39/83 (46%), Positives = 51/83 (61%) Frame = -1 Query: 519 GIPMRDIVTSCSAGYLCSTPLLDLNYIEDSAGGADVTVGILAKMDKVTLLQMDAKLPMDT 340 GIPMRD+V +C+AG + +LDL+ ED G ADV V IL + ++TLLQ D L + Sbjct: 152 GIPMRDMVVACAAGKVGDQVVLDLSEEEDKEGQADVPVAILPRTREITLLQSDGNLTPEE 211 Query: 339 FETVMDLATEGCKAIATYIREVL 271 FE +DLA EGC I +E L Sbjct: 212 FERALDLAVEGCLRIHEVQKEAL 234
>EXOS4_HUMAN (Q9NPD3) Exosome complex exonuclease RRP41 (EC 3.1.13.-) (Ribosomal| RNA-processing protein 41) (Exosome component 4) (p12A) Length = 244 Score = 73.2 bits (178), Expect = 4e-13 Identities = 32/89 (35%), Positives = 58/89 (65%) Frame = -1 Query: 519 GIPMRDIVTSCSAGYLCSTPLLDLNYIEDSAGGADVTVGILAKMDKVTLLQMDAKLPMDT 340 GIPMRD V +CSAG++ T L DL+++E++AGG + + +L ++ LL+MDA+L D Sbjct: 149 GIPMRDFVCACSAGFVDGTALADLSHVEEAAGGPQLALALLPASGQIALLEMDARLHEDH 208 Query: 339 FETVMDLATEGCKAIATYIREVLLENTKQ 253 E V++ A + + + T + V+ ++ ++ Sbjct: 209 LERVLEAAAQAARDVHTLLDRVVRQHVRE 237
>EXOS4_MOUSE (Q921I9) Exosome complex exonuclease RRP41 (EC 3.1.13.-) (Ribosomal| RNA-processing protein 41) (Exosome component 4) Length = 244 Score = 72.0 bits (175), Expect = 9e-13 Identities = 32/95 (33%), Positives = 59/95 (62%) Frame = -1 Query: 519 GIPMRDIVTSCSAGYLCSTPLLDLNYIEDSAGGADVTVGILAKMDKVTLLQMDAKLPMDT 340 GIPMRD V +CSAG++ T L DL+++E++AGG + + +L ++ LL+MD++L D Sbjct: 149 GIPMRDFVCACSAGFVDGTALADLSHVEEAAGGPQLALALLPASGQIALLEMDSRLHEDH 208 Query: 339 FETVMDLATEGCKAIATYIREVLLENTKQLECQRG 235 E V++ A + + + T + V+ ++ ++ G Sbjct: 209 LEQVLEAAAQAARGVHTLLDLVVRQHVQEASVSLG 243
>ECX1_PYRAB (Q9V119) Probable exosome complex exonuclease 1 (EC 3.1.13.-)| Length = 249 Score = 72.0 bits (175), Expect = 9e-13 Identities = 40/85 (47%), Positives = 52/85 (61%) Frame = -1 Query: 519 GIPMRDIVTSCSAGYLCSTPLLDLNYIEDSAGGADVTVGILAKMDKVTLLQMDAKLPMDT 340 GIPMRD+V +C+AG + +LDLN ED+ G ADV V I+ + +TLLQMD L D Sbjct: 152 GIPMRDLVAACAAGKIEGEIVLDLNKEEDNYGEADVPVAIMPLKNDITLLQMDGYLTKDE 211 Query: 339 FETVMDLATEGCKAIATYIREVLLE 265 F + LA +G KA+ RE L E Sbjct: 212 FIEAVKLAIKGAKAVYQKQREALKE 236
>ECX1_PYRFU (Q8U0L9) Probable exosome complex exonuclease 1 (EC 3.1.13.-)| Length = 250 Score = 71.2 bits (173), Expect = 2e-12 Identities = 40/85 (47%), Positives = 52/85 (61%) Frame = -1 Query: 519 GIPMRDIVTSCSAGYLCSTPLLDLNYIEDSAGGADVTVGILAKMDKVTLLQMDAKLPMDT 340 GIPMRD+V +CSAG + +LDLN ED+ G ADV V I+ + +TLLQMD L + Sbjct: 152 GIPMRDLVAACSAGKIEGEIVLDLNKEEDNYGEADVPVAIMPIKNDITLLQMDGYLTKEE 211 Query: 339 FETVMDLATEGCKAIATYIREVLLE 265 F + LA +G KA+ RE L E Sbjct: 212 FIEAVKLAIKGAKAVYQKQREALKE 236
>ECX1_PYRKO (Q5JIR6) Probable exosome complex exonuclease 1 (EC 3.1.13.-)| Length = 249 Score = 70.9 bits (172), Expect = 2e-12 Identities = 39/85 (45%), Positives = 52/85 (61%) Frame = -1 Query: 519 GIPMRDIVTSCSAGYLCSTPLLDLNYIEDSAGGADVTVGILAKMDKVTLLQMDAKLPMDT 340 GIPM+D+V +C+AG + +LDLN ED+ G ADV V I+ + +TLLQMD L D Sbjct: 152 GIPMKDLVAACAAGKIDGEIVLDLNKEEDNYGEADVPVAIMPLKNDITLLQMDGYLTKDE 211 Query: 339 FETVMDLATEGCKAIATYIREVLLE 265 F + LA +G KA+ RE L E Sbjct: 212 FLEAVRLAIKGAKAVYQKQREALKE 236
>ECX1_PYRHO (O59223) Probable exosome complex exonuclease 1 (EC 3.1.13.-)| Length = 249 Score = 70.1 bits (170), Expect = 3e-12 Identities = 39/85 (45%), Positives = 52/85 (61%) Frame = -1 Query: 519 GIPMRDIVTSCSAGYLCSTPLLDLNYIEDSAGGADVTVGILAKMDKVTLLQMDAKLPMDT 340 GIPMRD+V +C+AG + +LDLN ED+ G ADV V I+ + +TLLQMD L + Sbjct: 152 GIPMRDLVAACAAGKIEGEIVLDLNKEEDNYGEADVPVAIMPLKNDITLLQMDGYLTKEE 211 Query: 339 FETVMDLATEGCKAIATYIREVLLE 265 F + LA +G KA+ RE L E Sbjct: 212 FIEAVRLAIKGAKAVYQKQREALKE 236
>ECX1_METKA (Q8TYC1) Probable exosome complex exonuclease 1 (EC 3.1.13.-)| Length = 239 Score = 66.2 bits (160), Expect = 5e-11 Identities = 35/85 (41%), Positives = 49/85 (57%) Frame = -1 Query: 519 GIPMRDIVTSCSAGYLCSTPLLDLNYIEDSAGGADVTVGILAKMDKVTLLQMDAKLPMDT 340 GI MRD+V +C+AG + +LD Y ED G ADV + ++ K K+TLLQMD + Sbjct: 150 GIEMRDLVAACAAGKVEGKVVLDPMYYEDGYGEADVPLAMMPKEGKITLLQMDGDMTPGE 209 Query: 339 FETVMDLATEGCKAIATYIREVLLE 265 F+ + LA +GCK + R L E Sbjct: 210 FKQAVKLAKKGCKIVYKEQRRALKE 234
>ECX1_THEAC (Q9HIP2) Probable exosome complex exonuclease 1 (EC 3.1.13.-)| Length = 248 Score = 65.9 bits (159), Expect = 7e-11 Identities = 34/88 (38%), Positives = 49/88 (55%) Frame = -1 Query: 519 GIPMRDIVTSCSAGYLCSTPLLDLNYIEDSAGGADVTVGILAKMDKVTLLQMDAKLPMDT 340 G+PMRD+V C+AG + +LDL+ ED+ G AD+ + I+ K + L+QMD + D Sbjct: 153 GVPMRDMVVGCTAGKVDGHMVLDLSKEEDNYGEADIPIAIMPKTGDIVLMQMDGDVTEDE 212 Query: 339 FETVMDLATEGCKAIATYIREVLLENTK 256 MD+ E K I+ RE LL K Sbjct: 213 LYQAMDMIFEATKRISQIQREALLNKYK 240
>ECX1_THEVO (Q97BZ5) Probable exosome complex exonuclease 1 (EC 3.1.13.-)| Length = 248 Score = 62.8 bits (151), Expect = 6e-10 Identities = 34/88 (38%), Positives = 48/88 (54%) Frame = -1 Query: 519 GIPMRDIVTSCSAGYLCSTPLLDLNYIEDSAGGADVTVGILAKMDKVTLLQMDAKLPMDT 340 GIPMRD+V C+AG + +LDL+ ED+ G AD+ + I+ K ++ LLQMD + D Sbjct: 153 GIPMRDMVVGCTAGKVDGHIVLDLSKEEDNFGEADIPMAIMPKTGEIVLLQMDGDVTEDE 212 Query: 339 FETVMDLATEGCKAIATYIREVLLENTK 256 F + E K I+ R LL K Sbjct: 213 FYEATSMIIEATKKISQIQRNALLNKYK 240
>ECX1_SULSO (Q9UXC2) Probable exosome complex exonuclease 1 (EC 3.1.13.-)| Length = 248 Score = 60.5 bits (145), Expect = 3e-09 Identities = 30/83 (36%), Positives = 45/83 (54%) Frame = -1 Query: 519 GIPMRDIVTSCSAGYLCSTPLLDLNYIEDSAGGADVTVGILAKMDKVTLLQMDAKLPMDT 340 GIPMRD++ + G +LDLN ED G AD+ + ++ +++VTL Q++ + D Sbjct: 154 GIPMRDLIAGVAVGKADGVIILDLNETEDMWGEADMPIAMMPSLNQVTLFQLNGSMTPDE 213 Query: 339 FETVMDLATEGCKAIATYIREVL 271 F DLA +G I RE L Sbjct: 214 FRQAFDLAVKGINIIYNLEREAL 236
>ECX1_METMA (Q8PTT8) Probable exosome complex exonuclease 1 (EC 3.1.13.-)| Length = 493 Score = 58.2 bits (139), Expect = 1e-08 Identities = 32/83 (38%), Positives = 49/83 (59%) Frame = -1 Query: 519 GIPMRDIVTSCSAGYLCSTPLLDLNYIEDSAGGADVTVGILAKMDKVTLLQMDAKLPMDT 340 GIPM+ ++TSC+ G + +LDLN ED+ G AD V + + ++TL+QMD L D Sbjct: 152 GIPMKGLITSCAFGKVDGKIVLDLNKEEDNYGEADFPVA-MTQDGEITLIQMDGNLTPDE 210 Query: 339 FETVMDLATEGCKAIATYIREVL 271 + ++L +GCK I + VL Sbjct: 211 IKQGLELVKKGCKEILEIQQAVL 233
>ECX1_PYRAE (Q8ZVM9) Probable exosome complex exonuclease 1 (EC 3.1.13.-)| Length = 246 Score = 58.2 bits (139), Expect = 1e-08 Identities = 30/83 (36%), Positives = 45/83 (54%) Frame = -1 Query: 519 GIPMRDIVTSCSAGYLCSTPLLDLNYIEDSAGGADVTVGILAKMDKVTLLQMDAKLPMDT 340 GI MRD+V S G + T +LDLN +ED G D+ +G + + + TLLQ+D D Sbjct: 150 GIYMRDLVVGVSVGLVDGTVVLDLNGLEDQYGEGDLPLGYMPNLKRFTLLQLDGAWTRDM 209 Query: 339 FETVMDLATEGCKAIATYIREVL 271 F ++LA G + + R+ L Sbjct: 210 FLQALNLAVRGAEYVYQIARDAL 232
>RRP41_YEAST (P46948) Exosome complex exonuclease RRP41 (EC 3.1.13.-) (Ribosomal| RNA-processing protein 41) (SKI6 protein) Length = 246 Score = 56.6 bits (135), Expect = 4e-08 Identities = 29/89 (32%), Positives = 53/89 (59%) Frame = -1 Query: 519 GIPMRDIVTSCSAGYLCSTPLLDLNYIEDSAGGADVTVGILAKMDKVTLLQMDAKLPMDT 340 GI M D ++ S G +TPLLD N +E++A VT+G++ K +K++LL ++ K+P+D Sbjct: 151 GISMFDYISGISVGLYDTTPLLDTNSLEENAMST-VTLGVVGKSEKLSLLLVEDKIPLDR 209 Query: 339 FETVMDLATEGCKAIATYIREVLLENTKQ 253 E V+ + G + + E L ++ ++ Sbjct: 210 LENVLAIGIAGAHRVRDLMDEELRKHAQK 238
>ECX1_SULAC (Q4JB27) Probable exosome complex exonuclease 1 (EC 3.1.13.-)| Length = 243 Score = 56.6 bits (135), Expect = 4e-08 Identities = 29/83 (34%), Positives = 46/83 (55%) Frame = -1 Query: 519 GIPMRDIVTSCSAGYLCSTPLLDLNYIEDSAGGADVTVGILAKMDKVTLLQMDAKLPMDT 340 GIPMRD++ + G + +LDLN ED G AD+ + +L + +V LLQ++ + D Sbjct: 151 GIPMRDLIAGVAVGKADGSLVLDLNEQEDMWGEADMPIAVLPSLGQVVLLQLNGFMTPDE 210 Query: 339 FETVMDLATEGCKAIATYIREVL 271 F +LA +G +I +E L Sbjct: 211 FRRAFELAQKGISSIYALQKEAL 233
>RRP41_SCHPO (O42872) Putative exosome complex exonuclease RRP41 (EC 3.1.13.-)| (Ribosomal RNA-processing protein 41) Length = 242 Score = 54.7 bits (130), Expect = 2e-07 Identities = 30/88 (34%), Positives = 54/88 (61%) Frame = -1 Query: 519 GIPMRDIVTSCSAGYLCSTPLLDLNYIEDSAGGADVTVGILAKMDKVTLLQMDAKLPMDT 340 GIP++D V +AG + S LLDLN +E+SA + +TV +L + KV +Q++ + +D Sbjct: 149 GIPVKDFVCCSTAGIVESDMLLDLNSLEESA-LSWLTVAVLGNIKKVVYMQLETSMHLDY 207 Query: 339 FETVMDLATEGCKAIATYIREVLLENTK 256 E+VM++A G + I ++ + ++ K Sbjct: 208 LESVMNMAIAGSEHIYNTMQSAVRQSAK 235
>ECX1_SULTO (Q975G8) Probable exosome complex exonuclease 1 (EC 3.1.13.-)| Length = 247 Score = 53.9 bits (128), Expect = 3e-07 Identities = 27/91 (29%), Positives = 48/91 (52%) Frame = -1 Query: 519 GIPMRDIVTSCSAGYLCSTPLLDLNYIEDSAGGADVTVGILAKMDKVTLLQMDAKLPMDT 340 GIPMRD++ + G +LDLN ED G AD+ V ++ + +V LLQ++ + Sbjct: 155 GIPMRDLIAGVAVGKADGVLVLDLNEPEDMWGEADMPVAMMPSLKQVALLQLNGNMTPQE 214 Query: 339 FETVMDLATEGCKAIATYIREVLLENTKQLE 247 F +++A +G + I +E + +L+ Sbjct: 215 FRQALEMAQKGIETIYNLEKEAIRSKYAELK 245
>ECX1_ARCFU (O29757) Probable exosome complex exonuclease 1 (EC 3.1.13.-)| Length = 258 Score = 48.1 bits (113), Expect = 1e-05 Identities = 28/87 (32%), Positives = 46/87 (52%), Gaps = 3/87 (3%) Frame = -1 Query: 519 GIPMRDIVTSCSAGYLCSTPLLDLNYIEDSAGGADVTVGIL---AKMDKVTLLQMDAKLP 349 G+PM+ ++TS + G +LD ED+ G AD+ L K++ + LLQMD ++ Sbjct: 152 GVPMKGMITSVAVGKADGQLVLDPMKEEDNFGEADMPFAFLIRNGKIESIALLQMDGRMT 211 Query: 348 MDTFETVMDLATEGCKAIATYIREVLL 268 D + ++LA +G I RE +L Sbjct: 212 RDEVKQAIELAKKGALQIYEMQREAIL 238
>ECX1_AERPE (Q9YC03) Probable exosome complex exonuclease 1 (EC 3.1.13.-)| Length = 246 Score = 45.1 bits (105), Expect = 1e-04 Identities = 23/83 (27%), Positives = 43/83 (51%) Frame = -1 Query: 519 GIPMRDIVTSCSAGYLCSTPLLDLNYIEDSAGGADVTVGILAKMDKVTLLQMDAKLPMDT 340 GIPMR +V + G + ++D++ +ED G AD+ V + ++TLLQ++ L + Sbjct: 152 GIPMRALVGGVAVGKIQGVLVVDVDELEDMYGEADMPVAAAPDIGEITLLQLNGVLTGEE 211 Query: 339 FETVMDLATEGCKAIATYIREVL 271 F T + +A + +E + Sbjct: 212 FRTALAMALRAIDRVVEMEKEAI 234
>RNPH_STRCO (Q9S2H7) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 245 Score = 42.4 bits (98), Expect = 8e-04 Identities = 28/84 (33%), Positives = 41/84 (48%), Gaps = 3/84 (3%) Frame = -1 Query: 513 PMRDIVTSCSAGYLCSTPLLDLNYIEDSAGGADVTVGILAKMDKVTLLQMDAK---LPMD 343 P+ V++ S G + TPLLDL Y ED D+ V + + +Q A+ D Sbjct: 157 PLTGTVSAVSVGIVDGTPLLDLRYEEDVRADTDMNV-VCTGDGRFVEVQGTAEAEPFARD 215 Query: 342 TFETVMDLATEGCKAIATYIREVL 271 T++DLAT GC +A R+ L Sbjct: 216 ELNTLLDLATAGCTELAELQRKAL 239
>RNPH_BIFLO (Q8G7I0) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 248 Score = 42.0 bits (97), Expect = 0.001 Identities = 26/82 (31%), Positives = 41/82 (50%), Gaps = 2/82 (2%) Frame = -1 Query: 510 MRDIVTSCSAGYLCSTPLLDLNYIEDSAGGADVTVGILAKMDKVTLLQMDAKLPMDTFE- 334 ++D V++ S G + TP+LDL YIEDS D+ V + + + P + E Sbjct: 164 LKDYVSAVSVGVINGTPMLDLPYIEDSQAMTDMNVAMTGSGTFIEIQGTAEHRPFNRAEL 223 Query: 333 -TVMDLATEGCKAIATYIREVL 271 T++DLA +G K + R L Sbjct: 224 GTLLDLAEKGNKELQAAQRAAL 245
>RNPH_PASMU (Q9CJW5) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 238 Score = 42.0 bits (97), Expect = 0.001 Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 2/83 (2%) Frame = -1 Query: 513 PMRDIVTSCSAGYLCSTPLLDLNYIEDSAGGADVTVGIL--AKMDKVTLLQMDAKLPMDT 340 P++ +V + S G + P+ DL Y+EDSA D+ V ++ +M +V + Sbjct: 154 PIKSLVAAISVGIVEGVPVCDLEYVEDSAAETDMNVVMMEDGRMIEVQGTAEGEPFSHEE 213 Query: 339 FETVMDLATEGCKAIATYIREVL 271 T++ LA EGC+ I R+ L Sbjct: 214 LLTLLALAKEGCQLIFDVQRQAL 236
>RNPH_HAEIN (P44444) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 238 Score = 41.2 bits (95), Expect = 0.002 Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 2/83 (2%) Frame = -1 Query: 513 PMRDIVTSCSAGYLCSTPLLDLNYIEDSAGGADVTVGIL--AKMDKVTLLQMDAKLPMDT 340 P++ +V++ S G + + DL Y+EDSA D+ V ++ +M +V + Sbjct: 154 PIKGLVSAISVGIVDGQAVCDLEYVEDSAAETDMNVVMMEDGRMIEVQGTAEGEPFSHEE 213 Query: 339 FETVMDLATEGCKAIATYIREVL 271 T++DLA +GC I RE L Sbjct: 214 LLTLLDLAKQGCNQIFIAQREAL 236
>RNPH_TROWT (Q83FT1) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 247 Score = 40.8 bits (94), Expect = 0.002 Identities = 25/75 (33%), Positives = 37/75 (49%), Gaps = 2/75 (2%) Frame = -1 Query: 513 PMRDIVTSCSAGYLCSTPLLDLNYIEDSAGGADVTVGILAKMDKVTLLQMDAKLPMD--T 340 P+ D V++ S G + LDL+Y EDS AD+ + V + K P Sbjct: 164 PLTDSVSAVSVGLVGDQIFLDLDYSEDSNAQADINLVFTGSGKLVEIQGTAEKSPFSYGQ 223 Query: 339 FETVMDLATEGCKAI 295 FE +M+LA GC+A+ Sbjct: 224 FEQMMELAKTGCQAL 238
>RNPH_TROW8 (Q83HF6) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 247 Score = 40.8 bits (94), Expect = 0.002 Identities = 25/75 (33%), Positives = 37/75 (49%), Gaps = 2/75 (2%) Frame = -1 Query: 513 PMRDIVTSCSAGYLCSTPLLDLNYIEDSAGGADVTVGILAKMDKVTLLQMDAKLPMD--T 340 P+ D V++ S G + LDL+Y EDS AD+ + V + K P Sbjct: 164 PLTDSVSAVSVGLVGDQIFLDLDYSEDSNAQADINLVFTGSGKLVEIQGTAEKSPFSYGQ 223 Query: 339 FETVMDLATEGCKAI 295 FE +M+LA GC+A+ Sbjct: 224 FEQMMELAKTGCQAL 238
>RNPH_NEIMB (Q9JYN5) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 242 Score = 40.0 bits (92), Expect = 0.004 Identities = 24/71 (33%), Positives = 39/71 (54%), Gaps = 2/71 (2%) Frame = -1 Query: 513 PMRDIVTSCSAGYLCSTPLLDLNYIEDSAGGADVTVGILA--KMDKVTLLQMDAKLPMDT 340 P+R+ V + S G + PLLDL+Y EDS +DV + + A K+ ++ DA +D Sbjct: 157 PIREAVAAVSVGVVNGVPLLDLDYPEDSGCDSDVNIVMTASGKIIEIQGTAEDAPFSLDE 216 Query: 339 FETVMDLATEG 307 ++ LA +G Sbjct: 217 LGKLVALAQKG 227
>RNPH_NEIMA (Q9JTN2) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 242 Score = 40.0 bits (92), Expect = 0.004 Identities = 24/71 (33%), Positives = 39/71 (54%), Gaps = 2/71 (2%) Frame = -1 Query: 513 PMRDIVTSCSAGYLCSTPLLDLNYIEDSAGGADVTVGILA--KMDKVTLLQMDAKLPMDT 340 P+R+ V + S G + PLLDL+Y EDS +DV + + A K+ ++ DA +D Sbjct: 157 PIREAVAAVSVGVVNGVPLLDLDYPEDSGCDSDVNIVMTASGKIIEIQGTAEDAPFSLDE 216 Query: 339 FETVMDLATEG 307 ++ LA +G Sbjct: 217 LGKLVALAQKG 227
>RNPH_NITEU (Q82XJ4) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 241 Score = 39.7 bits (91), Expect = 0.005 Identities = 24/83 (28%), Positives = 42/83 (50%), Gaps = 2/83 (2%) Frame = -1 Query: 513 PMRDIVTSCSAGYLCSTPLLDLNYIEDSAGGADVTVGILAKMDKVTLLQMDAKL--PMDT 340 P+RD V + S G L PLLDL+Y+EDS D+ V + + V + K+ Sbjct: 155 PIRDHVAAVSVGILKGQPLLDLDYLEDSGCDTDLNVVMTGSLGLVEVQGTAEKVVFSRQE 214 Query: 339 FETVMDLATEGCKAIATYIREVL 271 + ++++A +G + + R+ L Sbjct: 215 LDVMLNMAQQGLQELFDVQRKAL 237
>RNPH_BDEBA (Q6MJR9) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 243 Score = 38.5 bits (88), Expect = 0.011 Identities = 27/86 (31%), Positives = 43/86 (50%), Gaps = 2/86 (2%) Frame = -1 Query: 516 IPMRDIVTSCSAGYLCSTPLLDLNYIEDSAGGADVTVGILAKMDKVTLLQMDAKLPM--D 343 +P+ + V++ S G LLDLNY EDSA G D+ + K V + +P D Sbjct: 151 LPLINYVSAISVGLHEGQILLDLNYDEDSAIGTDMNFVMTDKGQFVEVQGTAEHVPFTRD 210 Query: 342 TFETVMDLATEGCKAIATYIREVLLE 265 +MD+A +GC+ + + V+ E Sbjct: 211 QLFKMMDVAEKGCRELFIHQASVMGE 236
>RNPH_THETN (Q8RC30) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 261 Score = 38.1 bits (87), Expect = 0.015 Identities = 26/84 (30%), Positives = 41/84 (48%), Gaps = 2/84 (2%) Frame = -1 Query: 516 IPMRDIVTSCSAGYLCSTPLLDLNYIEDSAGGADVTVGILAKMDKVTLLQMDAKLPM--D 343 IP++ V + S G + LLDL++ ED+ D+ V + K + V + P Sbjct: 154 IPLKSFVAAVSVGIVEGNKLLDLSFQEDANALVDMNVVMTDKGEIVEIQGTGEGGPFSRQ 213 Query: 342 TFETVMDLATEGCKAIATYIREVL 271 FE ++DLA G + I +EVL Sbjct: 214 NFEELLDLAAHGIEQIIKIQKEVL 237
>RNPH_VIBCH (Q9KVD6) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 238 Score = 37.4 bits (85), Expect = 0.025 Identities = 24/77 (31%), Positives = 39/77 (50%) Frame = -1 Query: 513 PMRDIVTSCSAGYLCSTPLLDLNYIEDSAGGADVTVGILAKMDKVTLLQMDAKLPMDTFE 334 PM+ V + S G L L DL Y+EDSA D+ V ++ + K+ +Q A+ + E Sbjct: 154 PMKGHVAAVSVGILGEDVLCDLEYVEDSAADTDMNV-VMTEEGKMIEIQGTAEGEPFSHE 212 Query: 333 TVMDLATEGCKAIATYI 283 +++L K IA + Sbjct: 213 QLLELLAVAKKGIADIV 229
>RNPH_MANSM (Q65W01) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 240 Score = 37.4 bits (85), Expect = 0.025 Identities = 23/83 (27%), Positives = 40/83 (48%), Gaps = 2/83 (2%) Frame = -1 Query: 513 PMRDIVTSCSAGYLCSTPLLDLNYIEDSAGGADVTVGIL--AKMDKVTLLQMDAKLPMDT 340 P++ +V + S G + + DL Y+EDSA D+ V ++ +M +V + Sbjct: 154 PLKGLVAAVSVGIVNGEAVCDLEYVEDSAAETDMNVVMMEDGRMIEVQGTAEGEPFSHEE 213 Query: 339 FETVMDLATEGCKAIATYIREVL 271 T+++LA +GC I R L Sbjct: 214 LLTLLNLAKQGCNMIFDAQRRAL 236
>RNPH_SYMTH (Q67SL5) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 273 Score = 37.0 bits (84), Expect = 0.033 Identities = 22/84 (26%), Positives = 39/84 (46%), Gaps = 2/84 (2%) Frame = -1 Query: 516 IPMRDIVTSCSAGYLCSTPLLDLNYIEDSAGGADVTVGILAKMDKVTLLQMDAKLPMD-- 343 +P++D + + S G + P+LDL Y EDS D+ + + + V + + P Sbjct: 153 LPVKDYLAATSVGVVGGVPVLDLTYEEDSRAAVDLNLVMTGSGEVVEIQGTGEERPFTRR 212 Query: 342 TFETVMDLATEGCKAIATYIREVL 271 E ++ LA G + + RE L Sbjct: 213 ELEELLALAESGVRRLVALQREQL 236
>RNPH_RHILO (Q98DN6) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 238 Score = 37.0 bits (84), Expect = 0.033 Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 2/76 (2%) Frame = -1 Query: 510 MRDIVTSCSAGYLCSTPLLDLNYIEDSAGGADVTVGILAKMDKVTLLQMDAKLPM--DTF 337 ++D V + S G P++DL+Y+EDSA G D + K V + P D F Sbjct: 156 LKDHVAAISCGIHDGQPVIDLDYLEDSAAGTDANFVMTGKGGIVEIQGTAEGEPFSEDQF 215 Query: 336 ETVMDLATEGCKAIAT 289 +M LA +G + + + Sbjct: 216 AELMGLAKKGIQRLVS 231
>RNPH_STRAW (Q82D17) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 244 Score = 37.0 bits (84), Expect = 0.033 Identities = 27/88 (30%), Positives = 37/88 (42%), Gaps = 2/88 (2%) Frame = -1 Query: 513 PMRDIVTSCSAGYLCSTPLLDLNYIEDSAGGADVTVGILAKMDKVTLLQMDAKLPMDTFE 334 P+ V++ S G + PLLDL Y ED D+ V V + P D E Sbjct: 157 PLTGTVSAVSVGIVGGVPLLDLCYEEDVKADTDMNVVCTGDGRFVEVQGTAEAEPFDRKE 216 Query: 333 --TVMDLATEGCKAIATYIREVLLENTK 256 ++DLA GC +A R L T+ Sbjct: 217 LNALLDLAVSGCDELAVIQRAALEATTR 244
>RNPH_PSEAE (P50597) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 239 Score = 37.0 bits (84), Expect = 0.033 Identities = 16/38 (42%), Positives = 24/38 (63%) Frame = -1 Query: 519 GIPMRDIVTSCSAGYLCSTPLLDLNYIEDSAGGADVTV 406 G P++ +V + S G P+LDL+Y+EDSA D+ V Sbjct: 153 GNPLKQMVAAVSVGIYQGVPVLDLDYLEDSAAETDLNV 190
>RNPH_BORPA (Q7W6C1) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 250 Score = 36.2 bits (82), Expect = 0.055 Identities = 27/83 (32%), Positives = 38/83 (45%), Gaps = 2/83 (2%) Frame = -1 Query: 513 PMRDIVTSCSAGYLCSTPLLDLNYIEDSAGGADVTVGILAK--MDKVTLLQMDAKLPMDT 340 P+RD V + S G + +LDL+Y EDSA ADV V + +V A Sbjct: 167 PIRDAVAAVSVGLVDGRAVLDLDYQEDSACAADVNVVMTGSGAFVEVQGTGEGATFTRGE 226 Query: 339 FETVMDLATEGCKAIATYIREVL 271 +T++ LA G + RE L Sbjct: 227 LDTMLGLAEGGIAQLVRAQREAL 249
>RNPH_AGRT5 (Q8UIG8) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 238 Score = 36.2 bits (82), Expect = 0.055 Identities = 20/82 (24%), Positives = 38/82 (46%), Gaps = 2/82 (2%) Frame = -1 Query: 510 MRDIVTSCSAGYLCSTPLLDLNYIEDSAGGADVTVGILAK--MDKVTLLQMDAKLPMDTF 337 ++D + + S G P++DL+Y+EDS+ D I + +V A + F Sbjct: 156 LKDHIAAISCGIFAKQPVIDLDYLEDSSAETDANFVITGSGGIVEVQGTAEGAPFSEEEF 215 Query: 336 ETVMDLATEGCKAIATYIREVL 271 T++ LA GC + ++ + Sbjct: 216 LTLLGLAKAGCSELVALQKQAI 237
>RNPH_PSESM (Q88BE0) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 240 Score = 36.2 bits (82), Expect = 0.055 Identities = 15/38 (39%), Positives = 24/38 (63%) Frame = -1 Query: 519 GIPMRDIVTSCSAGYLCSTPLLDLNYIEDSAGGADVTV 406 G P++ ++ + S G P+LDL+Y+EDSA D+ V Sbjct: 154 GDPLKQMIAAVSVGMYQGEPVLDLDYLEDSAAETDLNV 191
>RNPH_BORPE (Q7VXY3) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 246 Score = 36.2 bits (82), Expect = 0.055 Identities = 27/83 (32%), Positives = 38/83 (45%), Gaps = 2/83 (2%) Frame = -1 Query: 513 PMRDIVTSCSAGYLCSTPLLDLNYIEDSAGGADVTVGILAK--MDKVTLLQMDAKLPMDT 340 P+RD V + S G + +LDL+Y EDSA ADV V + +V A Sbjct: 163 PIRDAVAAVSVGLVDGRAVLDLDYQEDSACAADVNVVMTGSGAFVEVQGTGEGATFTRGE 222 Query: 339 FETVMDLATEGCKAIATYIREVL 271 +T++ LA G + RE L Sbjct: 223 LDTMLGLAEGGIAQLVRAQREAL 245
>RNPH_BORBR (Q7WI90) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 246 Score = 36.2 bits (82), Expect = 0.055 Identities = 27/83 (32%), Positives = 38/83 (45%), Gaps = 2/83 (2%) Frame = -1 Query: 513 PMRDIVTSCSAGYLCSTPLLDLNYIEDSAGGADVTVGILAK--MDKVTLLQMDAKLPMDT 340 P+RD V + S G + +LDL+Y EDSA ADV V + +V A Sbjct: 163 PIRDAVAAVSVGLVDGRAVLDLDYQEDSACAADVNVVMTGSGAFVEVQGTGEGATFTRGE 222 Query: 339 FETVMDLATEGCKAIATYIREVL 271 +T++ LA G + RE L Sbjct: 223 LDTMLGLAEGGIAQLVRAQREAL 245
>RNPH_PASHA (Q9AES0) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 238 Score = 35.8 bits (81), Expect = 0.072 Identities = 23/86 (26%), Positives = 42/86 (48%), Gaps = 3/86 (3%) Frame = -1 Query: 513 PMRDIVTSCSAGYLCSTPLLDLNYIEDSAGGADVTVGILAKMDKVTLLQMDAK---LPMD 343 PM+ +V + S G + + DL Y+EDS D+ V ++ + ++ +Q A+ Sbjct: 154 PMKGLVAAISVGIVAGEAVCDLEYLEDSNAETDMNV-VMVQDGRLVEVQGTAEGEPFSHQ 212 Query: 342 TFETVMDLATEGCKAIATYIREVLLE 265 T++DLA +G + R+ L E Sbjct: 213 ELLTLLDLAKQGISQLVEAQRKALAE 238
>RNPH_GEOSL (Q74C79) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 238 Score = 35.8 bits (81), Expect = 0.072 Identities = 28/82 (34%), Positives = 37/82 (45%), Gaps = 13/82 (15%) Frame = -1 Query: 516 IPMRDIVTSCSAGYLCSTPLLDLNYIEDSAGGAD-----------VTVGILAKMDKVTLL 370 +P+R+ V + S G + LLDLNYIEDS D V V A+ + T Sbjct: 153 LPVREAVAAVSVGIVGGEVLLDLNYIEDSRADVDMNFVMTSSGRFVEVQGTAEAEPFTCA 212 Query: 369 QMD--AKLPMDTFETVMDLATE 310 QMD L M E +M + E Sbjct: 213 QMDDMRSLAMIGIERLMAIQQE 234
>RNPH_SYNPX (Q7U9I1) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 249 Score = 35.4 bits (80), Expect = 0.095 Identities = 25/84 (29%), Positives = 40/84 (47%), Gaps = 3/84 (3%) Frame = -1 Query: 513 PMRDIVTSCSAGYLCSTPLLDLNYIEDSAGGADVTVGILAKMDKVTLLQ---MDAKLPMD 343 P+R + + S G + TPLLDL+Y EDS D+ V + A ++ LQ A Sbjct: 158 PIRQQLAAVSVGLIDGTPLLDLDYSEDSRADVDLNV-VTAGDGRLLELQGTAEQAPFSRS 216 Query: 342 TFETVMDLATEGCKAIATYIREVL 271 + +++LA G + + R L Sbjct: 217 ELDAMLNLAESGLQELMQGQRHAL 240
>RNPH_AQUAE (O67069) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 255 Score = 35.4 bits (80), Expect = 0.095 Identities = 22/71 (30%), Positives = 36/71 (50%), Gaps = 2/71 (2%) Frame = -1 Query: 513 PMRDIVTSCSAGYLCSTPLLDLNYIEDSAGGADVTV--GILAKMDKVTLLQMDAKLPMDT 340 P++D V + S G + LLDLN+ EDSA D+ V ++ +V + + D Sbjct: 154 PIKDFVAAVSVGIVNDRILLDLNFEEDSAAQVDMNVVGTGSGRLSEVHTMGEEYSFTKDE 213 Query: 339 FETVMDLATEG 307 ++DLA +G Sbjct: 214 LIKMLDLAQKG 224
>RNPH_CORDI (Q6NFN6) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 241 Score = 35.4 bits (80), Expect = 0.095 Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Frame = -1 Query: 519 GIPMRDIVTSCSAGYLCSTPLLDLNYIEDSAGGADVTVGILAKMDKVTLLQMDAK---LP 349 G P++ V + S G + LDL Y EDS ADV + ++ + D+ +Q + Sbjct: 156 GNPLKAAVAAVSVGVIDGQVCLDLPYEEDSR--ADVDMNVIMQGDRFVEIQGTGEHNTFD 213 Query: 348 MDTFETVMDLATEGCKAI 295 D ++D A +GC+ + Sbjct: 214 RDELAVILDFAQKGCQEL 231
>RNPH_OCEIH (Q8EPJ5) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 244 Score = 35.4 bits (80), Expect = 0.095 Identities = 22/86 (25%), Positives = 44/86 (51%), Gaps = 3/86 (3%) Frame = -1 Query: 513 PMRDIVTSCSAGYLCS-TPLLDLNYIEDSAGGADVTVGILAKMDKVTL--LQMDAKLPMD 343 P++D + + S G L + T +LDLNY EDS D+ + + + + V + +A + Sbjct: 154 PIQDYLAAISVGVLTNGTEILDLNYEEDSEAAVDMNIVMTGEGEFVEIQGTGEEATFTPN 213 Query: 342 TFETVMDLATEGCKAIATYIREVLLE 265 + ++ L EG + + +E+L + Sbjct: 214 QLQNMLKLGEEGIQQLVKIQKELLAD 239
>RNPH_BURPS (Q63RV5) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 243 Score = 35.4 bits (80), Expect = 0.095 Identities = 17/36 (47%), Positives = 22/36 (61%) Frame = -1 Query: 513 PMRDIVTSCSAGYLCSTPLLDLNYIEDSAGGADVTV 406 P+ D V + S G TP+LDL+Y EDSA D+ V Sbjct: 159 PITDYVAAISVGVFGGTPVLDLDYDEDSACDTDMNV 194
>RNPH_BURMA (Q62HZ8) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 243 Score = 35.4 bits (80), Expect = 0.095 Identities = 17/36 (47%), Positives = 22/36 (61%) Frame = -1 Query: 513 PMRDIVTSCSAGYLCSTPLLDLNYIEDSAGGADVTV 406 P+ D V + S G TP+LDL+Y EDSA D+ V Sbjct: 159 PITDYVAAISVGVFGGTPVLDLDYDEDSACDTDMNV 194
>RNPH_VIBVY (Q7MPT3) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 238 Score = 35.0 bits (79), Expect = 0.12 Identities = 23/77 (29%), Positives = 38/77 (49%) Frame = -1 Query: 513 PMRDIVTSCSAGYLCSTPLLDLNYIEDSAGGADVTVGILAKMDKVTLLQMDAKLPMDTFE 334 PM+ V + S G L L DL Y+EDSA D+ V ++ + K+ +Q A+ + E Sbjct: 154 PMKGHVAAVSVGILGEDVLCDLEYVEDSAADTDMNV-VMTEEGKMIEIQGTAEGEPFSHE 212 Query: 333 TVMDLATEGCKAIATYI 283 ++ L K I+ + Sbjct: 213 QLLALLESAKKGISEIV 229
>RNPH_VIBVU (Q8DDX4) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 238 Score = 35.0 bits (79), Expect = 0.12 Identities = 23/77 (29%), Positives = 38/77 (49%) Frame = -1 Query: 513 PMRDIVTSCSAGYLCSTPLLDLNYIEDSAGGADVTVGILAKMDKVTLLQMDAKLPMDTFE 334 PM+ V + S G L L DL Y+EDSA D+ V ++ + K+ +Q A+ + E Sbjct: 154 PMKGHVAAVSVGILGEDVLCDLEYVEDSAADTDMNV-VMTEEGKMIEIQGTAEGEPFSHE 212 Query: 333 TVMDLATEGCKAIATYI 283 ++ L K I+ + Sbjct: 213 QLLALLESAKKGISEIV 229
>RNPH_RALSO (Q8XXF5) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 238 Score = 35.0 bits (79), Expect = 0.12 Identities = 15/38 (39%), Positives = 24/38 (63%) Frame = -1 Query: 519 GIPMRDIVTSCSAGYLCSTPLLDLNYIEDSAGGADVTV 406 G P+RD V + S G + P+LDL+Y ED++ D+ + Sbjct: 152 GEPIRDFVAAVSVGVVDGVPVLDLDYPEDASCDTDMNI 189
>RNPH_YERPS (Q66GE1) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 238 Score = 34.7 bits (78), Expect = 0.16 Identities = 22/75 (29%), Positives = 36/75 (48%), Gaps = 2/75 (2%) Frame = -1 Query: 513 PMRDIVTSCSAGYLCSTPLLDLNYIEDSAGGADVTVGIL--AKMDKVTLLQMDAKLPMDT 340 PM+ +V + S G + L DL Y+EDSA D+ V ++ +M +V + Sbjct: 154 PMKGLVAAVSVGIVKGEALCDLEYVEDSAAETDMNVVMMEDGRMIEVQGTAEGEPFSHEE 213 Query: 339 FETVMDLATEGCKAI 295 ++DLA G + I Sbjct: 214 LLALLDLARGGIETI 228
>RNPH_YERPE (Q8ZJP8) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 238 Score = 34.7 bits (78), Expect = 0.16 Identities = 22/75 (29%), Positives = 36/75 (48%), Gaps = 2/75 (2%) Frame = -1 Query: 513 PMRDIVTSCSAGYLCSTPLLDLNYIEDSAGGADVTVGIL--AKMDKVTLLQMDAKLPMDT 340 PM+ +V + S G + L DL Y+EDSA D+ V ++ +M +V + Sbjct: 154 PMKGLVAAVSVGIVKGEALCDLEYVEDSAAETDMNVVMMEDGRMIEVQGTAEGEPFSHEE 213 Query: 339 FETVMDLATEGCKAI 295 ++DLA G + I Sbjct: 214 LLALLDLARGGIETI 228
>RNPH_SYNEL (Q8DLA4) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 242 Score = 34.7 bits (78), Expect = 0.16 Identities = 23/84 (27%), Positives = 41/84 (48%), Gaps = 3/84 (3%) Frame = -1 Query: 513 PMRDIVTSCSAGYLCSTPLLDLNYIEDSAGGADVTVGILAKMDKVTLLQMDAKL---PMD 343 P+R V + S G + P LDL+Y ED A D V ++ + +Q A++ Sbjct: 155 PLRHQVAAVSVGLIDDEPYLDLSYAEDVAASVDFNV-VMTGSGQFIEVQGTAEMGSFDRG 213 Query: 342 TFETVMDLATEGCKAIATYIREVL 271 T + ++D+A +G + + + VL Sbjct: 214 TLDRLLDVARQGIQELIEIQQRVL 237
>RNPH_PROMM (Q7V4V8) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 244 Score = 34.7 bits (78), Expect = 0.16 Identities = 24/86 (27%), Positives = 43/86 (50%), Gaps = 3/86 (3%) Frame = -1 Query: 513 PMRDIVTSCSAGYLCSTPLLDLNYIEDSAGGADVTVGILAKMDKVTLLQMDAK---LPMD 343 P+ + V + S G + S PLLDL+Y EDS D+ V ++ + LQ A+ + Sbjct: 158 PVIEQVAAVSVGLVESYPLLDLDYSEDSRADVDLNV-VMGSNGHLLELQGTAEGAPFSRN 216 Query: 342 TFETVMDLATEGCKAIATYIREVLLE 265 +++LA G + + + R L++ Sbjct: 217 QLNDLLNLAEPGLQHLQAFQRSALMQ 242
>RNPH_NOCFA (Q5Z0V1) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 257 Score = 34.3 bits (77), Expect = 0.21 Identities = 24/86 (27%), Positives = 38/86 (44%), Gaps = 5/86 (5%) Frame = -1 Query: 513 PMRDIVTSCSAGYLCSTPLLDLNYIEDSAGGADVTVGILAKMDKVTLLQMD-----AKLP 349 P+ + + S G + LDL Y EDS D+ V D TL+++ A P Sbjct: 157 PISCAIAAVSVGVVDGRVRLDLPYEEDSRAEVDMNV---VATDTGTLVEIQGTGEGATFP 213 Query: 348 MDTFETVMDLATEGCKAIATYIREVL 271 T + ++D A GC+ + +E L Sbjct: 214 RSTLDKLLDAALAGCEQLFAVQKEAL 239
>RNPH_COXBU (Q83EL9) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 237 Score = 34.3 bits (77), Expect = 0.21 Identities = 24/86 (27%), Positives = 38/86 (44%), Gaps = 5/86 (5%) Frame = -1 Query: 513 PMRDIVTSCSAGYLCSTPLLDLNYIEDSAGGADVTVGILAKMDKVTLLQMDAKLPMDTF- 337 P++ V + S G P+LDL+Y EDS D+ V D +++ D F Sbjct: 154 PLKHKVAAVSVGIYKGVPVLDLDYAEDSNAHTDMNV---VMTDNDAFIEIQGTAEGDAFH 210 Query: 336 ----ETVMDLATEGCKAIATYIREVL 271 + +++LA G K I +E L Sbjct: 211 AKELDALINLARHGIKQIIEKQQEAL 236
>RNPH_SHIFL (Q83PN2) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 238 Score = 34.3 bits (77), Expect = 0.21 Identities = 23/76 (30%), Positives = 41/76 (53%), Gaps = 3/76 (3%) Frame = -1 Query: 513 PMRDIVTSCSAGYLCSTPLLDLNYIEDSAGGADVTVGILAKMDKVTLLQMDAKLPMDTFE 334 PM+ +V + S G + + DL Y+EDSA D+ V ++ + ++ +Q A+ T E Sbjct: 154 PMKGMVAAVSVGIVNGEAICDLEYVEDSAAETDMNV-VMTEDGRIIEVQGTAEGEPFTHE 212 Query: 333 ---TVMDLATEGCKAI 295 T++ LA G ++I Sbjct: 213 ELLTLLALARGGIESI 228
>RNPH_CHRVO (Q7MBD4) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 238 Score = 34.3 bits (77), Expect = 0.21 Identities = 23/84 (27%), Positives = 41/84 (48%), Gaps = 3/84 (3%) Frame = -1 Query: 513 PMRDIVTSCSAGYLCSTPLLDLNYIEDSAGGADVTVGILAKMDKVTLLQMDAK---LPMD 343 P+RD V + S G P+LDL+Y+EDS D+ V ++ + +Q A+ + Sbjct: 154 PLRDQVAAVSVGVYKGQPVLDLDYLEDSDCETDMNV-VMTGSGRFVEVQGTAEGEPFSEE 212 Query: 342 TFETVMDLATEGCKAIATYIREVL 271 ++ LA +G + + R+ L Sbjct: 213 EMAAMLGLARKGIAELLAHQRQAL 236
>RNPH_RHOPA (Q6NCY8) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 237 Score = 33.9 bits (76), Expect = 0.28 Identities = 24/73 (32%), Positives = 33/73 (45%), Gaps = 2/73 (2%) Frame = -1 Query: 519 GIPMRDIVTSCSAGYLCSTPLLDLNYIEDSAGGADVTVGILAKMDKVTLLQMDAKLP--M 346 G +RD V + S G TP+LDL+Y EDS D + V + + P Sbjct: 152 GQVLRDNVAAISCGIYNGTPVLDLDYAEDSEAETDANFVMTGDGRLVEVQGTAERTPFSQ 211 Query: 345 DTFETVMDLATEG 307 D F +M LA +G Sbjct: 212 DEFLQLMALAQKG 224
>RNPH_VIBPA (Q87T93) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 238 Score = 33.9 bits (76), Expect = 0.28 Identities = 22/65 (33%), Positives = 34/65 (52%) Frame = -1 Query: 513 PMRDIVTSCSAGYLCSTPLLDLNYIEDSAGGADVTVGILAKMDKVTLLQMDAKLPMDTFE 334 PM+ V + S G L L DL Y+EDSA D+ V ++ + K+ +Q A+ + E Sbjct: 154 PMKGHVAAVSVGLLGDEVLCDLEYVEDSAADTDMNV-VMTEEGKMIEIQGTAEGEPFSHE 212 Query: 333 TVMDL 319 +M L Sbjct: 213 QLMAL 217
>RNPH_SALTY (P0A2C3) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 238 Score = 33.9 bits (76), Expect = 0.28 Identities = 24/87 (27%), Positives = 45/87 (51%), Gaps = 3/87 (3%) Frame = -1 Query: 513 PMRDIVTSCSAGYLCSTPLLDLNYIEDSAGGADVTVGILAKMDKVTLLQMDAK---LPMD 343 PM+ +V + S G + + DL Y+EDSA D+ V ++ + ++ +Q A+ + Sbjct: 154 PMKGMVAAVSVGIVNGEAICDLEYVEDSAAETDMNV-VMTEDGRIIEVQGTAEGEPFSHE 212 Query: 342 TFETVMDLATEGCKAIATYIREVLLEN 262 T++ LA G ++I ++ LEN Sbjct: 213 ELLTLLALARGGIESIVA-TQKAALEN 238
>RNPH_SALTI (P0A2C4) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 238 Score = 33.9 bits (76), Expect = 0.28 Identities = 24/87 (27%), Positives = 45/87 (51%), Gaps = 3/87 (3%) Frame = -1 Query: 513 PMRDIVTSCSAGYLCSTPLLDLNYIEDSAGGADVTVGILAKMDKVTLLQMDAK---LPMD 343 PM+ +V + S G + + DL Y+EDSA D+ V ++ + ++ +Q A+ + Sbjct: 154 PMKGMVAAVSVGIVNGEAICDLEYVEDSAAETDMNV-VMTEDGRIIEVQGTAEGEPFSHE 212 Query: 342 TFETVMDLATEGCKAIATYIREVLLEN 262 T++ LA G ++I ++ LEN Sbjct: 213 ELLTLLALARGGIESIVA-TQKAALEN 238
>RNPH_ECOL6 (P66679) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 238 Score = 33.9 bits (76), Expect = 0.28 Identities = 23/76 (30%), Positives = 41/76 (53%), Gaps = 3/76 (3%) Frame = -1 Query: 513 PMRDIVTSCSAGYLCSTPLLDLNYIEDSAGGADVTVGILAKMDKVTLLQMDAKLPMDTFE 334 PM+ +V + S G + + DL Y+EDSA D+ V ++ + ++ +Q A+ T E Sbjct: 154 PMKGMVAAVSVGIVNGEAVCDLEYVEDSAAETDMNV-VMTEDGRIIEVQGTAEGEPFTHE 212 Query: 333 ---TVMDLATEGCKAI 295 T++ LA G ++I Sbjct: 213 ELLTLLALARGGIESI 228
>RNPH_ECO57 (P66680) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 238 Score = 33.9 bits (76), Expect = 0.28 Identities = 23/76 (30%), Positives = 41/76 (53%), Gaps = 3/76 (3%) Frame = -1 Query: 513 PMRDIVTSCSAGYLCSTPLLDLNYIEDSAGGADVTVGILAKMDKVTLLQMDAKLPMDTFE 334 PM+ +V + S G + + DL Y+EDSA D+ V ++ + ++ +Q A+ T E Sbjct: 154 PMKGMVAAVSVGIVNGEAVCDLEYVEDSAAETDMNV-VMTEDGRIIEVQGTAEGEPFTHE 212 Query: 333 ---TVMDLATEGCKAI 295 T++ LA G ++I Sbjct: 213 ELLTLLALARGGIESI 228
>RNPH_PROAC (Q6A759) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 244 Score = 33.5 bits (75), Expect = 0.36 Identities = 24/83 (28%), Positives = 35/83 (42%), Gaps = 2/83 (2%) Frame = -1 Query: 513 PMRDIVTSCSAGYLCSTPLLDLNYIEDSAGGADVTVGILAKMDKVTLLQMDAKLPM--DT 340 P+ V + S G + P+LDL Y EDS D+ V + D V + P + Sbjct: 158 PIIGSVQAISVGVVDGIPMLDLAYKEDSRADTDMNVVMSGNGDFVEIQGTAEGTPFNRNL 217 Query: 339 FETVMDLATEGCKAIATYIREVL 271 ++DLA GC + E L Sbjct: 218 LNELLDLAAGGCATLKQAQSEAL 240
>RNPH_SHEON (Q8E9L4) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 237 Score = 33.1 bits (74), Expect = 0.47 Identities = 18/65 (27%), Positives = 35/65 (53%) Frame = -1 Query: 513 PMRDIVTSCSAGYLCSTPLLDLNYIEDSAGGADVTVGILAKMDKVTLLQMDAKLPMDTFE 334 P++ ++ + S G + DL Y+EDSA D+ V ++ + K+ +Q A+ T E Sbjct: 154 PLKFLIAAVSVGIYNGEAISDLEYVEDSAAETDMNV-VMTETGKIIEIQGTAEGEPFTHE 212 Query: 333 TVMDL 319 +++L Sbjct: 213 ELIEL 217
>RNPH_ERWCT (Q6DAW2) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 238 Score = 33.1 bits (74), Expect = 0.47 Identities = 15/36 (41%), Positives = 21/36 (58%) Frame = -1 Query: 513 PMRDIVTSCSAGYLCSTPLLDLNYIEDSAGGADVTV 406 PM+ +V + S G + L DL Y+EDSA D+ V Sbjct: 154 PMKGMVAAVSVGIVKGEALCDLEYVEDSAAETDMNV 189
>RNPH_PHOPR (Q6LVN8) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 238 Score = 32.7 bits (73), Expect = 0.61 Identities = 23/84 (27%), Positives = 42/84 (50%), Gaps = 3/84 (3%) Frame = -1 Query: 513 PMRDIVTSCSAGYLCSTPLLDLNYIEDSAGGADVTVGILAKMDKVTLLQMDAKLPMDTFE 334 P++ +V + S G + DL Y+EDSA D+ V ++ + K+ +Q A+ + E Sbjct: 154 PIKGMVAAVSVGIYKGEAICDLEYLEDSAAETDMNV-VMTEEGKMIEIQGTAEGEAFSHE 212 Query: 333 ---TVMDLATEGCKAIATYIREVL 271 ++ LA +G I T ++ L Sbjct: 213 ELLAMLALAKDGIADIVTMQKQAL 236
>RNPH_RHIME (Q92SK2) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 239 Score = 32.7 bits (73), Expect = 0.61 Identities = 13/32 (40%), Positives = 21/32 (65%) Frame = -1 Query: 510 MRDIVTSCSAGYLCSTPLLDLNYIEDSAGGAD 415 ++D V + S G + P++DL+Y+EDSA D Sbjct: 156 LKDHVAAISCGIFANQPVIDLDYLEDSAAETD 187
>RNPH_PSEPK (Q88C89) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 240 Score = 32.7 bits (73), Expect = 0.61 Identities = 14/38 (36%), Positives = 23/38 (60%) Frame = -1 Query: 519 GIPMRDIVTSCSAGYLCSTPLLDLNYIEDSAGGADVTV 406 G P++ ++ + S G +LDL+Y+EDSA D+ V Sbjct: 154 GNPLKHMIAAVSVGMYQGEAVLDLDYLEDSAAETDLNV 191
>RNPH_BRAJA (Q89WK4) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 237 Score = 32.3 bits (72), Expect = 0.80 Identities = 22/76 (28%), Positives = 36/76 (47%) Frame = -1 Query: 510 MRDIVTSCSAGYLCSTPLLDLNYIEDSAGGADVTVGILAKMDKVTLLQMDAKLPMDTFET 331 +RD V + S G TP+LDL+Y EDS D ++ ++ +Q A+ T + Sbjct: 155 LRDNVAAISCGIYNGTPVLDLDYAEDSEAQTDANF-VMTGDGRIIEVQGTAEREPFTQDE 213 Query: 330 VMDLATEGCKAIATYI 283 ++ L K IA + Sbjct: 214 LLALMALAQKGIARLV 229
>RNPH_ECOLI (P03842) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 238 Score = 32.0 bits (71), Expect = 1.0 Identities = 14/36 (38%), Positives = 21/36 (58%) Frame = -1 Query: 513 PMRDIVTSCSAGYLCSTPLLDLNYIEDSAGGADVTV 406 PM+ +V + S G + + DL Y+EDSA D+ V Sbjct: 154 PMKGMVAAVSVGIVNGEAVCDLEYVEDSAAETDMNV 189
>RNPH_MYCLE (P37939) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 259 Score = 31.6 bits (70), Expect = 1.4 Identities = 23/86 (26%), Positives = 42/86 (48%), Gaps = 5/86 (5%) Frame = -1 Query: 513 PMRDIVTSCSAGYLCSTPLLDLNYIEDSAGGADVTVGILAKMDKVTLLQMD-----AKLP 349 P+ + + S G + +DL+Y EDS A+V + ++A D TL+++ A P Sbjct: 157 PLSCAIAAVSVGVVDGRIRVDLSYEEDSR--AEVDMNVIA-TDTGTLVEIQGTGEGATFP 213 Query: 348 MDTFETVMDLATEGCKAIATYIREVL 271 T + ++D+A C + R+ L Sbjct: 214 RSTLDKLLDMALGACDKLFVAQRDAL 239
>RNPH_PHOLL (Q7MAX2) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 242 Score = 31.6 bits (70), Expect = 1.4 Identities = 23/86 (26%), Positives = 39/86 (45%), Gaps = 2/86 (2%) Frame = -1 Query: 513 PMRDIVTSCSAGYLCSTPLLDLNYIEDSAGGADVTVGIL--AKMDKVTLLQMDAKLPMDT 340 P++ +V + S G + DL Y+EDSA D+ V ++ +M +V D Sbjct: 154 PLKSMVAAVSVGIVDGEGRCDLEYVEDSAAETDMNVVMMEDGRMIEVQGTAEGEPFSHDE 213 Query: 339 FETVMDLATEGCKAIATYIREVLLEN 262 +++ LA G + I R L +N Sbjct: 214 LLSLLALAKGGLEDIFDAQRNALKQN 239
>RNPH_LISMO (Q8Y7N6) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 248 Score = 31.2 bits (69), Expect = 1.8 Identities = 15/37 (40%), Positives = 23/37 (62%), Gaps = 1/37 (2%) Frame = -1 Query: 513 PMRDIVTSCSAGYLCST-PLLDLNYIEDSAGGADVTV 406 P++D + + S G L +LDLNY+EDSA D+ + Sbjct: 154 PVKDFLAATSVGVLEEGGTVLDLNYVEDSAAQVDMNI 190
>RNPH_LISMF (Q720J1) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 248 Score = 31.2 bits (69), Expect = 1.8 Identities = 15/37 (40%), Positives = 23/37 (62%), Gaps = 1/37 (2%) Frame = -1 Query: 513 PMRDIVTSCSAGYLCST-PLLDLNYIEDSAGGADVTV 406 P++D + + S G L +LDLNY+EDSA D+ + Sbjct: 154 PVKDFLAATSVGVLEEGGTVLDLNYVEDSAAQVDMNI 190
>RNPH_LISIN (Q92CH1) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 248 Score = 31.2 bits (69), Expect = 1.8 Identities = 15/37 (40%), Positives = 23/37 (62%), Gaps = 1/37 (2%) Frame = -1 Query: 513 PMRDIVTSCSAGYLCST-PLLDLNYIEDSAGGADVTV 406 P++D + + S G L +LDLNY+EDSA D+ + Sbjct: 154 PVKDFLAATSVGVLEEGGTVLDLNYVEDSAAQVDMNI 190
>RNPH_BRUSU (Q8G2Y5) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 238 Score = 30.8 bits (68), Expect = 2.3 Identities = 21/70 (30%), Positives = 31/70 (44%), Gaps = 2/70 (2%) Frame = -1 Query: 510 MRDIVTSCSAGYLCSTPLLDLNYIEDSAGGADVTVGILAKMDKVTLLQMDAKLPM--DTF 337 ++D V + S G P+LDL+Y EDS D + K V + +P + F Sbjct: 156 LKDHVAAISCGIYEGVPVLDLDYAEDSVAETDSNFVMTGKGGIVEIQGTAEGVPFSEEEF 215 Query: 336 ETVMDLATEG 307 +M LA G Sbjct: 216 GALMKLARSG 225
>RNPH_BRUME (Q8YEV2) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 238 Score = 30.8 bits (68), Expect = 2.3 Identities = 21/70 (30%), Positives = 31/70 (44%), Gaps = 2/70 (2%) Frame = -1 Query: 510 MRDIVTSCSAGYLCSTPLLDLNYIEDSAGGADVTVGILAKMDKVTLLQMDAKLPM--DTF 337 ++D V + S G P+LDL+Y EDS D + K V + +P + F Sbjct: 156 LKDHVAAISCGIYEGVPVLDLDYAEDSVAETDSNFVMTGKGGIVEIQGTAEGVPFSEEEF 215 Query: 336 ETVMDLATEG 307 +M LA G Sbjct: 216 GALMKLARSG 225
>RNPH_ZYMMO (Q5NRL6) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 237 Score = 30.4 bits (67), Expect = 3.0 Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 2/75 (2%) Frame = -1 Query: 513 PMRDIVTSCSAGYLCSTPLLDLNYIEDSAGGADVTVGIL--AKMDKVTLLQMDAKLPMDT 340 P+ V + S G P+LDL+Y EDS AD ++ +++ +V A + Sbjct: 154 PIISQVAAVSCGISQGVPVLDLDYAEDSTAEADANFVMMGDSRLIEVQASAEGAPYDEEG 213 Query: 339 FETVMDLATEGCKAI 295 ++ LA GC+ I Sbjct: 214 LLRLLRLARMGCQQI 228
>RNPH_BACSU (P28619) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 245 Score = 30.0 bits (66), Expect = 4.0 Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 4/93 (4%) Frame = -1 Query: 513 PMRDIVTSCSAGYLCSTP-LLDLNYIEDSAGGADVTVGILAKMDKVTLLQ---MDAKLPM 346 P+ D + + S G LLDLNY EDS+ D+ V I+ + LQ +A Sbjct: 154 PITDFLAAISVGIDKEQGILLDLNYEEDSSAEVDMNV-IMTGSGRFVELQGTGEEATFSR 212 Query: 345 DTFETVMDLATEGCKAIATYIREVLLENTKQLE 247 + ++ LA +G + + +EVL ++ +L+ Sbjct: 213 EDLNGLLGLAEKGIQELIDKQKEVLGDSLPELK 245
>RNPH_FRATT (Q5NGI2) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 235 Score = 30.0 bits (66), Expect = 4.0 Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 3/76 (3%) Frame = -1 Query: 513 PMRDIVTSCSAGYLCSTPLLDLNYIEDSAGGADVTVGILAKMDKVTLLQMDAK---LPMD 343 P+ V + S G + P+LDL+Y EDS D+ V ++ + +Q A+ + Sbjct: 156 PLLSQVAAISVGIYNNEPVLDLDYDEDSNAETDMNV-VMNSNGGIIEIQGTAEGKDFSEE 214 Query: 342 TFETVMDLATEGCKAI 295 F ++ LA +G K I Sbjct: 215 EFAKMLGLAKKGIKEI 230
>RNPH_BACHK (Q6HD42) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 245 Score = 29.6 bits (65), Expect = 5.2 Identities = 24/93 (25%), Positives = 41/93 (44%), Gaps = 3/93 (3%) Frame = -1 Query: 516 IPMRDIVTSCSAGYLCSTPL-LDLNYIEDSAGGADVTVGILAKMDKVTL--LQMDAKLPM 346 IP++D + + S G + + LDLNY EDS D+ V + K V + +A Sbjct: 153 IPVKDYLAATSVGIVEEQGVVLDLNYAEDSKADVDMNVIMTGKGQFVEVQGTGEEATFSR 212 Query: 345 DTFETVMDLATEGCKAIATYIREVLLENTKQLE 247 ++D A +G + +E L + +E Sbjct: 213 AQLNELLDAAEQGIFQLIDIQKEALGDIVSHIE 245
>RNPH_BACCZ (Q633V4) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 245 Score = 29.6 bits (65), Expect = 5.2 Identities = 24/93 (25%), Positives = 41/93 (44%), Gaps = 3/93 (3%) Frame = -1 Query: 516 IPMRDIVTSCSAGYLCSTPL-LDLNYIEDSAGGADVTVGILAKMDKVTL--LQMDAKLPM 346 IP++D + + S G + + LDLNY EDS D+ V + K V + +A Sbjct: 153 IPVKDYLAATSVGIVEEQGVVLDLNYAEDSKADVDMNVIMTGKGQFVEVQGTGEEATFSR 212 Query: 345 DTFETVMDLATEGCKAIATYIREVLLENTKQLE 247 ++D A +G + +E L + +E Sbjct: 213 AQLNELLDAAEQGIFQLIDIQKEALGDIVSHIE 245
>RNPH_BACCR (Q817P3) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 245 Score = 29.6 bits (65), Expect = 5.2 Identities = 24/93 (25%), Positives = 41/93 (44%), Gaps = 3/93 (3%) Frame = -1 Query: 516 IPMRDIVTSCSAGYLCSTPL-LDLNYIEDSAGGADVTVGILAKMDKVTL--LQMDAKLPM 346 IP++D + + S G + + LDLNY EDS D+ V + K V + +A Sbjct: 153 IPVKDYLAATSVGIVEEQGVVLDLNYAEDSKADVDMNVIMTGKGQFVEVQGTGEEATFSR 212 Query: 345 DTFETVMDLATEGCKAIATYIREVLLENTKQLE 247 ++D A +G + +E L + +E Sbjct: 213 AQLNELLDAAEQGIFQLIDMQKEALGDIVSHIE 245
>RNPH_BACC1 (Q72ZT1) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 245 Score = 29.6 bits (65), Expect = 5.2 Identities = 24/93 (25%), Positives = 41/93 (44%), Gaps = 3/93 (3%) Frame = -1 Query: 516 IPMRDIVTSCSAGYLCSTPL-LDLNYIEDSAGGADVTVGILAKMDKVTL--LQMDAKLPM 346 IP++D + + S G + + LDLNY EDS D+ V + K V + +A Sbjct: 153 IPVKDYLAATSVGIVEEQGVVLDLNYAEDSKADVDMNVIMTGKGQFVEVQGTGEEATFSR 212 Query: 345 DTFETVMDLATEGCKAIATYIREVLLENTKQLE 247 ++D A +G + +E L + +E Sbjct: 213 AQLNELLDAAEQGIFQLIDMQKEALGDIVSHIE 245
>RNPH_BACAN (Q81LA9) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 245 Score = 29.6 bits (65), Expect = 5.2 Identities = 24/93 (25%), Positives = 41/93 (44%), Gaps = 3/93 (3%) Frame = -1 Query: 516 IPMRDIVTSCSAGYLCSTPL-LDLNYIEDSAGGADVTVGILAKMDKVTL--LQMDAKLPM 346 IP++D + + S G + + LDLNY EDS D+ V + K V + +A Sbjct: 153 IPVKDYLAATSVGIVEEQGVVLDLNYAEDSKADVDMNVIMTGKGQFVEVQGTGEEATFSR 212 Query: 345 DTFETVMDLATEGCKAIATYIREVLLENTKQLE 247 ++D A +G + +E L + +E Sbjct: 213 AQLNELLDAAEQGIFQLIDIQKEALGDIVSHIE 245
>HAS1_XENLA (P13563) Hyaluronan synthase 1 (EC 2.4.1.212) (Hyaluronate synthase| 1) (Hyaluronic acid synthase 1) (HA synthase 1) (xHAS1) (DG42 protein) Length = 588 Score = 29.6 bits (65), Expect = 5.2 Identities = 11/23 (47%), Positives = 11/23 (47%) Frame = -2 Query: 392 RWTK*LFCRWTRNCQWIHSRLSW 324 RWTK F W N QW H W Sbjct: 381 RWTKSYFREWLYNAQWWHKHHIW 403
>RNPH_DESPS (Q6ANS2) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 236 Score = 29.6 bits (65), Expect = 5.2 Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 3/67 (4%) Frame = -1 Query: 498 VTSCSAGYLCSTPLLDLNYIEDSAGGADVTVGILAKMDKVTLLQMDAK---LPMDTFETV 328 V + S G LLDL+Y+EDS+ AD ++A + +Q A+ D F + Sbjct: 159 VVAISVGMKDGQALLDLDYVEDSSADADANF-VMAGDGRWIEVQSTAEGRPFSHDQFLAM 217 Query: 327 MDLATEG 307 DLA +G Sbjct: 218 ADLAQKG 224
>TRPV6_RAT (Q9R186) Transient receptor potential cation channel subfamily V| member 6 (TrpV6) (Epithelial calcium channel 2) (ECaC2) (Calcium transport protein 1) (CaT1) Length = 727 Score = 29.3 bits (64), Expect = 6.8 Identities = 8/18 (44%), Positives = 11/18 (61%) Frame = -2 Query: 377 LFCRWTRNCQWIHSRLSW 324 + C W + C+W H R SW Sbjct: 12 ILCLWNKFCRWFHRRESW 29
>RNPH_CAUCR (P48196) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA| nucleotidyltransferase) Length = 238 Score = 29.3 bits (64), Expect = 6.8 Identities = 22/71 (30%), Positives = 31/71 (43%), Gaps = 2/71 (2%) Frame = -1 Query: 513 PMRDIVTSCSAGYLCSTPLLDLNYIEDSAGGADVTVGILAKMDKVTLLQMDAK--LPMDT 340 P+ V + S G P+LDL+Y EDS AD + D V + K Sbjct: 154 PILGQVAAVSCGVFNGVPVLDLDYEEDSNAEADSNFVLTGVGDIVEIQATGEKRGFTRAE 213 Query: 339 FETVMDLATEG 307 FE++ LA +G Sbjct: 214 FESLYGLAEKG 224
>ACO11_HUMAN (Q8WXI4) Acyl-coenzyme A thioesterase 11 (EC 3.1.2.-) (Acyl-CoA| thioesterase 11) (Acyl-CoA thioester hydrolase 11) (Brown fat-inducible thioesterase) (BFIT) (Adipose-associated thioesterase) Length = 607 Score = 29.3 bits (64), Expect = 6.8 Identities = 22/80 (27%), Positives = 38/80 (47%), Gaps = 2/80 (2%) Frame = -1 Query: 483 AGYLCSTPLLDLNYIEDSAGGADVTVGILAKMDKVTLLQMDAKLPMDTFETVMDLATEGC 304 AG C T +D Y E + V V I AK+++ M+ + + + + + C Sbjct: 85 AGCPCVTASMDDIYFEHTISVGQV-VNIKAKVNRAFNSSMEVGIQVASEDLCSEKQWNVC 143 Query: 303 KAIATYI--REVLLENTKQL 250 KA+AT++ RE+ KQ+ Sbjct: 144 KALATFVARREITKVKLKQI 163 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 66,442,725 Number of Sequences: 219361 Number of extensions: 1177340 Number of successful extensions: 3007 Number of sequences better than 10.0: 94 Number of HSP's better than 10.0 without gapping: 2953 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3002 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3927707336 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
