ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart23e05 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT017852.1| Zea mays clone EL01N0511C01.c mRNA sequence Length = 1274 Score = 232 bits (117), Expect = 9e-58 Identities = 240/281 (85%) Strand = Plus / Minus Query: 239 cgctgacactccagctgcttcgtgttctccaatagcacctctcggatgtaggttgcgatc 298 ||||||||||| |||| ||| || |||||||||||||||||||||||||| ||||| || Sbjct: 776 cgctgacactcaagcttctttgtattctccaatagcacctctcggatgtaagttgcaatt 717 Query: 299 gctttgcacccttcggttgcaaggtccatgacagtctcgaatgtatccattggcagtttc 358 |||||||||||||| ||||||| |||| ||| | || |||||||| ||||| | ||| Sbjct: 716 gctttgcacccttctattgcaagtcccattacattttcaaatgtatcaattggtaatttt 657 Query: 359 gcgtccatctgcagaagagtcactttgtccatctttgcaagaatgccaacggtgacatcc 418 || |||||||| || | ||||||||||||||||||||||||||||||||| |||||||| Sbjct: 656 gcatccatctgaagcaaagtcactttgtccatctttgcaagaatgccaacagtgacatcg 597 Query: 419 gcgcctccagcgctgtcttctatataattcagatcaagcaagggagtagagcacagatac 478 | || ||||| |||||||| | ||||||||||| ||||| |||||||| |||||||| Sbjct: 596 gaacccccagcactgtcttcgaggtaattcagatcgagcaaaggagtagaacacagataa 537 Query: 479 ccagcactgcaagaagtgactatgtctcgcattggaatccc 519 |||||||| || || ||| | |||||||||||||||||||| Sbjct: 536 ccagcactacatgatgtggcaatgtctcgcattggaatccc 496
>ref|XM_450295.1| Oryza sativa (japonica cultivar-group), mRNA Length = 738 Score = 194 bits (98), Expect = 2e-46 Identities = 158/178 (88%) Strand = Plus / Minus Query: 277 ctctcggatgtaggttgcgatcgctttgcacccttcggttgcaaggtccatgacagtctc 336 ||||||||||||| ||||||| |||||||| ||||| ||||||||||||| ||||| || Sbjct: 714 ctctcggatgtagtttgcgatagctttgcagccttcaattgcaaggtccattacagtttc 655 Query: 337 gaatgtatccattggcagtttcgcgtccatctgcagaagagtcactttgtccatctttgc 396 |||||||||||||| | ||| || ||||||||||||||||| |||||||||||||||| Sbjct: 654 aaatgtatccattggtaattttgcatccatctgcagaagagtaactttgtccatctttgt 595 Query: 397 aagaatgccaacggtgacatccgcgcctccagcgctgtcttctatataattcagatca 454 ||||| |||||| |||||||| | |||||||| |||||||||||||||||||||||| Sbjct: 594 aagaaagccaacagtgacatctggacctccagcactgtcttctatataattcagatca 537 Score = 48.1 bits (24), Expect = 0.029 Identities = 36/40 (90%) Strand = Plus / Minus Query: 480 cagcactgcaagaagtgactatgtctcgcattggaatccc 519 ||||||||||||| || || ||||||||||| |||||||| Sbjct: 538 cagcactgcaagatgtaacaatgtctcgcatgggaatccc 499
>gb|AY110913.1| Zea mays CL1582_7 mRNA sequence Length = 794 Score = 119 bits (60), Expect = 9e-24 Identities = 129/152 (84%) Strand = Plus / Minus Query: 239 cgctgacactccagctgcttcgtgttctccaatagcacctctcggatgtaggttgcgatc 298 ||||||||||| |||| ||| || |||||||||||||||||||||||||| ||||| || Sbjct: 390 cgctgacactcaagcttctttgtattctccaatagcacctctcggatgtaagttgcaatt 331 Query: 299 gctttgcacccttcggttgcaaggtccatgacagtctcgaatgtatccattggcagtttc 358 |||||||||||||| ||||||| |||| ||| | || |||||||| ||||| | ||| Sbjct: 330 gctttgcacccttctattgcaagtcccattacattttcaaatgtatcaattggtaatttt 271 Query: 359 gcgtccatctgcagaagagtcactttgtccat 390 || |||||||| || | ||||||||||||||| Sbjct: 270 gcatccatctgaagcaaagtcactttgtccat 239 Score = 81.8 bits (41), Expect = 2e-12 Identities = 68/77 (88%) Strand = Plus / Minus Query: 443 taattcagatcaagcaagggagtagagcacagatacccagcactgcaagaagtgactatg 502 ||||||||||| ||||| |||||||| |||||||| |||||||| || || ||| | ||| Sbjct: 186 taattcagatcgagcaaaggagtagaacacagataaccagcactacatgatgtggcaatg 127 Query: 503 tctcgcattggaatccc 519 ||||||||||||||||| Sbjct: 126 tctcgcattggaatccc 110
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 109 bits (55), Expect = 9e-21 Identities = 79/87 (90%) Strand = Plus / Minus Query: 367 ctgcagaagagtcactttgtccatctttgcaagaatgccaacggtgacatccgcgcctcc 426 |||||||||||| |||||||||||||||| ||||| |||||| |||||||| | ||||| Sbjct: 3908332 ctgcagaagagtaactttgtccatctttgtaagaaagccaacagtgacatctggacctcc 3908273 Query: 427 agcgctgtcttctatataattcagatc 453 ||| ||||||||||||||||||||||| Sbjct: 3908272 agcactgtcttctatataattcagatc 3908246 Score = 93.7 bits (47), Expect = 5e-16 Identities = 83/95 (87%) Strand = Plus / Minus Query: 275 acctctcggatgtaggttgcgatcgctttgcacccttcggttgcaaggtccatgacagtc 334 ||||||||||||||| ||||||| |||||||| ||||| ||||||||||||| ||||| Sbjct: 3908643 acctctcggatgtagtttgcgatagctttgcagccttcaattgcaaggtccattacagtt 3908584 Query: 335 tcgaatgtatccattggcagtttcgcgtccatctg 369 || |||||||||||||| | ||| || |||||||| Sbjct: 3908583 tcaaatgtatccattggtaattttgcatccatctg 3908549 Score = 77.8 bits (39), Expect = 3e-11 Identities = 60/67 (89%) Strand = Plus / Minus Query: 453 caagcaagggagtagagcacagatacccagcactgcaagaagtgactatgtctcgcattg 512 ||||||| |||||||| |||||||| |||||||||||||| || || ||||||||||| | Sbjct: 3908164 caagcaaaggagtagaacacagataaccagcactgcaagatgtaacaatgtctcgcatgg 3908105 Query: 513 gaatccc 519 ||||||| Sbjct: 3908104 gaatccc 3908098 Score = 46.1 bits (23), Expect = 0.11 Identities = 44/51 (86%) Strand = Plus / Minus Query: 228 ttaactagccgcgctgacactccagctgcttcgtgttctccaatagcacct 278 ||||||| || ||||| ||||||||| | | ||||||||||||||||||| Sbjct: 3910460 ttaactaaccacgctggcactccagccgtcttgtgttctccaatagcacct 3910410
>dbj|AP005905.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1080A02 Length = 151360 Score = 109 bits (55), Expect = 9e-21 Identities = 79/87 (90%) Strand = Plus / Minus Query: 367 ctgcagaagagtcactttgtccatctttgcaagaatgccaacggtgacatccgcgcctcc 426 |||||||||||| |||||||||||||||| ||||| |||||| |||||||| | ||||| Sbjct: 147848 ctgcagaagagtaactttgtccatctttgtaagaaagccaacagtgacatctggacctcc 147789 Query: 427 agcgctgtcttctatataattcagatc 453 ||| ||||||||||||||||||||||| Sbjct: 147788 agcactgtcttctatataattcagatc 147762 Score = 93.7 bits (47), Expect = 5e-16 Identities = 83/95 (87%) Strand = Plus / Minus Query: 275 acctctcggatgtaggttgcgatcgctttgcacccttcggttgcaaggtccatgacagtc 334 ||||||||||||||| ||||||| |||||||| ||||| ||||||||||||| ||||| Sbjct: 148159 acctctcggatgtagtttgcgatagctttgcagccttcaattgcaaggtccattacagtt 148100 Query: 335 tcgaatgtatccattggcagtttcgcgtccatctg 369 || |||||||||||||| | ||| || |||||||| Sbjct: 148099 tcaaatgtatccattggtaattttgcatccatctg 148065 Score = 77.8 bits (39), Expect = 3e-11 Identities = 60/67 (89%) Strand = Plus / Minus Query: 453 caagcaagggagtagagcacagatacccagcactgcaagaagtgactatgtctcgcattg 512 ||||||| |||||||| |||||||| |||||||||||||| || || ||||||||||| | Sbjct: 147680 caagcaaaggagtagaacacagataaccagcactgcaagatgtaacaatgtctcgcatgg 147621 Query: 513 gaatccc 519 ||||||| Sbjct: 147620 gaatccc 147614 Score = 46.1 bits (23), Expect = 0.11 Identities = 44/51 (86%) Strand = Plus / Minus Query: 228 ttaactagccgcgctgacactccagctgcttcgtgttctccaatagcacct 278 ||||||| || ||||| ||||||||| | | ||||||||||||||||||| Sbjct: 149976 ttaactaaccacgctggcactccagccgtcttgtgttctccaatagcacct 149926
>dbj|AP005590.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0574F11 Length = 159891 Score = 109 bits (55), Expect = 9e-21 Identities = 79/87 (90%) Strand = Plus / Minus Query: 367 ctgcagaagagtcactttgtccatctttgcaagaatgccaacggtgacatccgcgcctcc 426 |||||||||||| |||||||||||||||| ||||| |||||| |||||||| | ||||| Sbjct: 39844 ctgcagaagagtaactttgtccatctttgtaagaaagccaacagtgacatctggacctcc 39785 Query: 427 agcgctgtcttctatataattcagatc 453 ||| ||||||||||||||||||||||| Sbjct: 39784 agcactgtcttctatataattcagatc 39758 Score = 93.7 bits (47), Expect = 5e-16 Identities = 83/95 (87%) Strand = Plus / Minus Query: 275 acctctcggatgtaggttgcgatcgctttgcacccttcggttgcaaggtccatgacagtc 334 ||||||||||||||| ||||||| |||||||| ||||| ||||||||||||| ||||| Sbjct: 40155 acctctcggatgtagtttgcgatagctttgcagccttcaattgcaaggtccattacagtt 40096 Query: 335 tcgaatgtatccattggcagtttcgcgtccatctg 369 || |||||||||||||| | ||| || |||||||| Sbjct: 40095 tcaaatgtatccattggtaattttgcatccatctg 40061 Score = 77.8 bits (39), Expect = 3e-11 Identities = 60/67 (89%) Strand = Plus / Minus Query: 453 caagcaagggagtagagcacagatacccagcactgcaagaagtgactatgtctcgcattg 512 ||||||| |||||||| |||||||| |||||||||||||| || || ||||||||||| | Sbjct: 39676 caagcaaaggagtagaacacagataaccagcactgcaagatgtaacaatgtctcgcatgg 39617 Query: 513 gaatccc 519 ||||||| Sbjct: 39616 gaatccc 39610 Score = 46.1 bits (23), Expect = 0.11 Identities = 44/51 (86%) Strand = Plus / Minus Query: 228 ttaactagccgcgctgacactccagctgcttcgtgttctccaatagcacct 278 ||||||| || ||||| ||||||||| | | ||||||||||||||||||| Sbjct: 41972 ttaactaaccacgctggcactccagccgtcttgtgttctccaatagcacct 41922
>gb|BT013197.1| Lycopersicon esculentum clone 134353F, mRNA sequence Length = 1105 Score = 73.8 bits (37), Expect = 5e-10 Identities = 82/97 (84%) Strand = Plus / Minus Query: 342 tatccattggcagtttcgcgtccatctgcagaagagtcactttgtccatctttgcaagaa 401 |||||||||| ||||| || |||||||||||||| ||||||||||||| ||| | | || Sbjct: 675 tatccattggtagtttagcatccatctgcagaagggtcactttgtccaacttaggtaaaa 616 Query: 402 tgccaacggtgacatccgcgcctccagcgctgtcttc 438 | || || |||||||| || |||||||| |||||||| Sbjct: 615 ttcctacagtgacatcagcacctccagcactgtcttc 579
>ref|NM_116027.2| Arabidopsis thaliana RRP41; 3'-5'-exoribonuclease/ RNA binding AT3G61620 (RRP41) mRNA, complete cds Length = 969 Score = 46.1 bits (23), Expect = 0.11 Identities = 50/59 (84%) Strand = Plus / Minus Query: 398 agaatgccaacggtgacatccgcgcctccagcgctgtcttctatataattcagatcaag 456 ||||| || ||||| ||||| || |||||||| |||||||| | ||| ||||||||||| Sbjct: 655 agaataccgacggttacatcagctcctccagcactgtcttcaacatagttcagatcaag 597
>emb|AL132959.1|ATF15G16 Arabidopsis thaliana DNA chromosome 3, BAC clone F15G16 Length = 104868 Score = 46.1 bits (23), Expect = 0.11 Identities = 50/59 (84%) Strand = Plus / Plus Query: 398 agaatgccaacggtgacatccgcgcctccagcgctgtcttctatataattcagatcaag 456 ||||| || ||||| ||||| || |||||||| |||||||| | ||| ||||||||||| Sbjct: 13092 agaataccgacggttacatcagctcctccagcactgtcttcaacatagttcagatcaag 13150
>emb|AL132962.1|ATF2A19 Arabidopsis thaliana DNA chromosome 3, BAC clone F2A19 Length = 95993 Score = 46.1 bits (23), Expect = 0.11 Identities = 50/59 (84%) Strand = Plus / Plus Query: 398 agaatgccaacggtgacatccgcgcctccagcgctgtcttctatataattcagatcaag 456 ||||| || ||||| ||||| || |||||||| |||||||| | ||| ||||||||||| Sbjct: 95873 agaataccgacggttacatcagctcctccagcactgtcttcaacatagttcagatcaag 95931
>emb|BX823183.1|CNS0A771 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB95ZG05 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 919 Score = 46.1 bits (23), Expect = 0.11 Identities = 50/59 (84%) Strand = Plus / Minus Query: 398 agaatgccaacggtgacatccgcgcctccagcgctgtcttctatataattcagatcaag 456 ||||| || ||||| ||||| || |||||||| |||||||| | ||| ||||||||||| Sbjct: 594 agaataccgacggttacatcagctcctccagcactgtcttcaacatagttcagatcaag 536
>gb|BT005485.1| Arabidopsis thaliana clone U51127 putative exonuclease RRP41 (At3g61620) mRNA, complete cds Length = 757 Score = 46.1 bits (23), Expect = 0.11 Identities = 50/59 (84%) Strand = Plus / Minus Query: 398 agaatgccaacggtgacatccgcgcctccagcgctgtcttctatataattcagatcaag 456 ||||| || ||||| ||||| || |||||||| |||||||| | ||| ||||||||||| Sbjct: 557 agaataccgacggttacatcagctcctccagcactgtcttcaacatagttcagatcaag 499
>gb|AF191741.1|AF191741 Arabidopsis thaliana exonuclease RRP41 (RRP41) mRNA, complete cds Length = 942 Score = 46.1 bits (23), Expect = 0.11 Identities = 50/59 (84%) Strand = Plus / Minus Query: 398 agaatgccaacggtgacatccgcgcctccagcgctgtcttctatataattcagatcaag 456 ||||| || ||||| ||||| || |||||||| |||||||| | ||| ||||||||||| Sbjct: 628 agaataccgacggttacatcagctcctccagcactgtcttcaacatagttcagatcaag 570
>dbj|AK118846.1| Arabidopsis thaliana At3g61620 mRNA for putative exonuclease RRP41, complete cds, clone: RAFL21-17-J09 Length = 954 Score = 46.1 bits (23), Expect = 0.11 Identities = 50/59 (84%) Strand = Plus / Minus Query: 398 agaatgccaacggtgacatccgcgcctccagcgctgtcttctatataattcagatcaag 456 ||||| || ||||| ||||| || |||||||| |||||||| | ||| ||||||||||| Sbjct: 655 agaataccgacggttacatcagctcctccagcactgtcttcaacatagttcagatcaag 597
>gb|AC122767.16| Mus musculus chromosome 7, clone RP24-143L4, complete sequence Length = 192484 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 135 aaaaataaataaaaatcaatgct 157 ||||||||||||||||||||||| Sbjct: 94728 aaaaataaataaaaatcaatgct 94706
>emb|AL161593.2|ATCHRIV89 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 89 Length = 199789 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 135 aaaaataaataaaaatcaatgc 156 |||||||||||||||||||||| Sbjct: 91487 aaaaataaataaaaatcaatgc 91508
>emb|AL035539.1|ATF22I13 Arabidopsis thaliana DNA chromosome 4, BAC clone F22I13 (ESSA project) Length = 93760 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 135 aaaaataaataaaaatcaatgc 156 |||||||||||||||||||||| Sbjct: 50530 aaaaataaataaaaatcaatgc 50551
>gb|AF282854.4| Homo sapiens chromosome X clone RP11-157E12 map q28, complete sequence Length = 187411 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 137 aaataaataaaaatcaatgcta 158 |||||||||||||||||||||| Sbjct: 150538 aaataaataaaaatcaatgcta 150559
>gb|AC069558.5|AC069558 Genomic Sequence For Arabidopsis thaliana Clone T5G13 From Chromosome IV, complete sequence Length = 107740 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 135 aaaaataaataaaaatcaatgc 156 |||||||||||||||||||||| Sbjct: 74038 aaaaataaataaaaatcaatgc 74017
>gb|AC107754.9| Mus musculus chromosome 7, clone RP23-231J2, complete sequence Length = 171637 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 134 taaaaataaataaaaatcaatgcta 158 |||||||| |||||||||||||||| Sbjct: 90965 taaaaatatataaaaatcaatgcta 90941
>gb|AY968537.1| Corynocarpus laevigatus rpl20-rps12 intergenic spacer, partial sequence; plastid Length = 757 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 125 ttcagtatctaaaaataaataaaaa 149 |||| |||||||||||||||||||| Sbjct: 676 ttcactatctaaaaataaataaaaa 652
>gb|AY968530.1| Begonia oxyloba rpl20-rps12 intergenic spacer, partial sequence; plastid Length = 760 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 125 ttcagtatctaaaaataaataaaaa 149 |||| |||||||||||||||||||| Sbjct: 675 ttcactatctaaaaataaataaaaa 651
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 135 aaaaataaataaaaatcaatg 155 ||||||||||||||||||||| Sbjct: 9189725 aaaaataaataaaaatcaatg 9189745
>gb|AC122375.4| Mus musculus BAC clone RP23-469G18 from chromosome 16, complete sequence Length = 189557 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 134 taaaaataaataaaaatcaat 154 ||||||||||||||||||||| Sbjct: 182995 taaaaataaataaaaatcaat 182975
>emb|AL023844.1|CEY48A6B Caenorhabditis elegans YAC Y48A6B, complete sequence Length = 75073 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 134 taaaaataaataaaaatcaat 154 ||||||||||||||||||||| Sbjct: 40574 taaaaataaataaaaatcaat 40594
>emb|AL392087.7| Human DNA sequence from clone RP11-454H24 on chromosome 10 Contains part of a novel gene (KIAA0534), complete sequence Length = 193980 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 137 aaataaataaaaatcaatgct 157 ||||||||||||||||||||| Sbjct: 83507 aaataaataaaaatcaatgct 83527
>emb|CR933001.12| Zebrafish DNA sequence from clone DKEY-158B11 in linkage group 5, complete sequence Length = 158802 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 134 taaaaataaataaaaatcaat 154 ||||||||||||||||||||| Sbjct: 130153 taaaaataaataaaaatcaat 130173
>gb|AC166146.17| Medicago truncatula clone mth2-174g5, complete sequence Length = 110916 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 134 taaaaataaataaaaatcaatgcta 158 |||||||||| |||||||||||||| Sbjct: 67761 taaaaataaaaaaaaatcaatgcta 67785
>gb|AC107315.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0032O19, from chromosome 3, complete sequence Length = 142248 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 135 aaaaataaataaaaatcaatg 155 ||||||||||||||||||||| Sbjct: 96666 aaaaataaataaaaatcaatg 96646
>gb|AC068254.6| Homo sapiens chromosome 18, clone RP11-543H23, complete sequence Length = 219260 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 127 cagtatctaaaaataaataaaaatcaatg 155 |||||| ||||||| |||||||||||||| Sbjct: 76731 cagtatttaaaaatgaataaaaatcaatg 76759
>gb|AC158502.3| Medicago truncatula chromosome 7 BAC clone mth2-73i16, complete sequence Length = 124955 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 130 tatctaaaaataaataaaaat 150 ||||||||||||||||||||| Sbjct: 60121 tatctaaaaataaataaaaat 60141
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 135 aaaaataaataaaaatcaatg 155 ||||||||||||||||||||| Sbjct: 9187558 aaaaataaataaaaatcaatg 9187578
>gb|AC153912.8| Mus musculus 10 BAC RP23-331E5 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 206168 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 134 taaaaataaataaaaatcaat 154 ||||||||||||||||||||| Sbjct: 131059 taaaaataaataaaaatcaat 131039
>emb|BX005070.10| Zebrafish DNA sequence from clone DKEY-13B19 in linkage group 17, complete sequence Length = 242955 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 135 aaaaataaataaaaatcaatg 155 ||||||||||||||||||||| Sbjct: 24960 aaaaataaataaaaatcaatg 24940
>dbj|AP002057.1| Arabidopsis thaliana genomic DNA, chromosome 3, BAC clone: T19N8 Length = 73391 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 130 tatctaaaaataaataaaaat 150 ||||||||||||||||||||| Sbjct: 62369 tatctaaaaataaataaaaat 62389
>gb|AC115029.12| Mus musculus chromosome 3, clone RP24-248I17, complete sequence Length = 171133 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 134 taaaaataaataaaaatcaat 154 ||||||||||||||||||||| Sbjct: 99131 taaaaataaataaaaatcaat 99111
>emb|BX950197.23| Zebrafish DNA sequence from clone CH211-123N8 in linkage group 10, complete sequence Length = 155683 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 134 taaaaataaataaaaatcaat 154 ||||||||||||||||||||| Sbjct: 112916 taaaaataaataaaaatcaat 112896
>emb|CR391989.15| Zebrafish DNA sequence from clone DKEY-263H23 in linkage group 19, complete sequence Length = 154561 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 129 gtatctaaaaataaataaaaatcaa 153 ||||||||||||||||||| ||||| Sbjct: 98794 gtatctaaaaataaataaacatcaa 98770
>gb|AC114925.6| Mus musculus BAC clone RP24-349O21 from 16, complete sequence Length = 150121 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 134 taaaaataaataaaaatcaat 154 ||||||||||||||||||||| Sbjct: 129129 taaaaataaataaaaatcaat 129149
>dbj|AP006089.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT28L17, TM0153b, complete sequence Length = 92148 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 134 taaaaataaataaaaatcaat 154 ||||||||||||||||||||| Sbjct: 77528 taaaaataaataaaaatcaat 77548
>emb|AL672248.13| Mouse DNA sequence from clone RP23-82A12 on chromosome X, complete sequence Length = 192322 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 135 aaaaataaataaaaatcaatg 155 ||||||||||||||||||||| Sbjct: 162825 aaaaataaataaaaatcaatg 162805
>emb|AL772257.7| Mouse DNA sequence from clone RP23-238I12 on chromosome 4, complete sequence Length = 171815 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 131 atctaaaaataaataaaaatcaatg 155 |||| |||||||||||||||||||| Sbjct: 82799 atcttaaaataaataaaaatcaatg 82823
>emb|AL672006.7| Mouse DNA sequence from clone RP23-28L9 on chromosome X, complete sequence Length = 80470 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 134 taaaaataaataaaaatcaat 154 ||||||||||||||||||||| Sbjct: 72601 taaaaataaataaaaatcaat 72621
>gb|AC119875.7| Mus musculus chromosome 1, clone RP24-291C20, complete sequence Length = 162379 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 134 taaaaataaataaaaatcaa 153 |||||||||||||||||||| Sbjct: 151416 taaaaataaataaaaatcaa 151435
>gb|U50199.1| Caenorhabditis elegans cosmid T14F9, complete sequence Length = 36679 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 134 taaaaataaataaaaatcaa 153 |||||||||||||||||||| Sbjct: 14832 taaaaataaataaaaatcaa 14813
>gb|AC116875.10| Mus musculus chromosome 8, clone RP24-426B21, complete sequence Length = 188938 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 135 aaaaataaataaaaatcaat 154 |||||||||||||||||||| Sbjct: 162648 aaaaataaataaaaatcaat 162629
>gb|AC091499.2| Drosophila melanogaster clone BACR33L22, complete sequence Length = 182105 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 134 taaaaataaataaaaatcaa 153 |||||||||||||||||||| Sbjct: 34997 taaaaataaataaaaatcaa 35016
>gb|AC140478.2| Mus musculus BAC clone RP24-149A3 from chromosome 6, complete sequence Length = 162440 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 149 atcaatgctagctctgctag 168 |||||||||||||||||||| Sbjct: 75603 atcaatgctagctctgctag 75584
>gb|AC146377.5| Pan troglodytes BAC clone RP43-79B6 from 7, complete sequence Length = 195459 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 134 taaaaataaataaaaatcaa 153 |||||||||||||||||||| Sbjct: 121701 taaaaataaataaaaatcaa 121720
>gb|AC157805.3| Mus musculus chromosome 1, clone RP24-324B17, complete sequence Length = 212185 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 tctaaaaataaataaaaatc 151 |||||||||||||||||||| Sbjct: 7137 tctaaaaataaataaaaatc 7118
>gb|AC002067.2| Homo sapiens BAC clone CTB-126M9 from 7, complete sequence Length = 162912 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 134 taaaaataaataaaaatcaa 153 |||||||||||||||||||| Sbjct: 95142 taaaaataaataaaaatcaa 95161
>gb|DQ160197.1| Homo sapiens RAD51-like 1 (S. cerevisiae) (RAD51L1) gene, complete cds Length = 660392 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 213 ctttaattgctaggtttaac 232 |||||||||||||||||||| Sbjct: 281292 ctttaattgctaggtttaac 281311
>gb|AC139939.6| Mus musculus chromosome 1, clone RP23-458O23, complete sequence Length = 175033 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 134 taaaaataaataaaaatcaa 153 |||||||||||||||||||| Sbjct: 35631 taaaaataaataaaaatcaa 35650
>gb|AC182698.2| Populus trichocarpa clone Pop1-72E16, complete sequence Length = 87565 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 134 taaaaataaataaaaatcaa 153 |||||||||||||||||||| Sbjct: 40149 taaaaataaataaaaatcaa 40130
>emb|CT025546.10| Zebrafish DNA sequence from clone DKEY-105J11 in linkage group 18, complete sequence Length = 210488 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 134 taaaaataaataaaaatcaa 153 |||||||||||||||||||| Sbjct: 128474 taaaaataaataaaaatcaa 128455
>gb|AC112149.4| Mus musculus BAC clone RP23-186F18 from chromosome 10, complete sequence Length = 195384 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 134 taaaaataaataaaaatcaa 153 |||||||||||||||||||| Sbjct: 60552 taaaaataaataaaaatcaa 60571
>gb|AC122816.4| Mus musculus BAC clone RP23-235N10 from chromosome 6, complete sequence Length = 177967 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 131 atctaaaaataaataaaaat 150 |||||||||||||||||||| Sbjct: 153767 atctaaaaataaataaaaat 153748
>emb|Z74031.1|CEF32D8 Caenorhabditis elegans Cosmid F32D8, complete sequence Length = 39519 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 136 aaaataaataaaaatcaatg 155 |||||||||||||||||||| Sbjct: 35104 aaaataaataaaaatcaatg 35123
>emb|Z50016.1|CET21C12 Caenorhabditis elegans Cosmid T21C12, complete sequence Length = 38787 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 131 atctaaaaataaataaaaat 150 |||||||||||||||||||| Sbjct: 23536 atctaaaaataaataaaaat 23555
>gb|AC124722.3| Mus musculus BAC clone RP23-389E7 from chromosome 6, complete sequence Length = 193830 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 131 atctaaaaataaataaaaat 150 |||||||||||||||||||| Sbjct: 41849 atctaaaaataaataaaaat 41868
>gb|AC107759.18| Mus musculus chromosome 5, clone RP23-193N17, complete sequence Length = 262970 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 135 aaaaataaataaaaatcaat 154 |||||||||||||||||||| Sbjct: 18388 aaaaataaataaaaatcaat 18369
>gb|AC130215.3| Mus musculus BAC clone RP23-286E1 from 6, complete sequence Length = 168515 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 204 cttcaaatgctttaattgct 223 |||||||||||||||||||| Sbjct: 106060 cttcaaatgctttaattgct 106041
>emb|CR407701.6| Zebrafish DNA sequence from clone DKEY-160O24 in linkage group 14, complete sequence Length = 96575 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 135 aaaaataaataaaaatcaat 154 |||||||||||||||||||| Sbjct: 93246 aaaaataaataaaaatcaat 93227
>gb|AC110028.8| Mus musculus chromosome 6, clone RP23-44E17, complete sequence Length = 243770 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 131 atctaaaaataaataaaaat 150 |||||||||||||||||||| Sbjct: 149375 atctaaaaataaataaaaat 149356
>gb|AC004448.4| Homo sapiens chromosome 17, clone CTB-187M2, complete sequence Length = 149157 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 131 atctaaaaataaataaaaat 150 |||||||||||||||||||| Sbjct: 33013 atctaaaaataaataaaaat 33032
>gb|AC009030.10| Homo sapiens chromosome 16 clone RP11-13G6, complete sequence Length = 189379 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 130 tatctaaaaataaataaaaa 149 |||||||||||||||||||| Sbjct: 171577 tatctaaaaataaataaaaa 171558
>emb|BX649266.9| Zebrafish DNA sequence from clone DKEY-19J7 in linkage group 9, complete sequence Length = 235135 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 362 tccatctgcagaagagtcac 381 |||||||||||||||||||| Sbjct: 16198 tccatctgcagaagagtcac 16179
>emb|AL596326.5| Human DNA sequence from clone RP11-373J16 on chromosome 1 Contains the 3' end of a novel gene, a glyceraldehyde-3-phosphate dehydrogenase (GAPD) pseudogene and a CpG island, complete sequence Length = 178309 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 134 taaaaataaataaaaatcaa 153 |||||||||||||||||||| Sbjct: 70715 taaaaataaataaaaatcaa 70696
>emb|AL442203.12| Human DNA sequence from clone RP11-12I24 on chromosome 13 Contains the 5' end of a novel gene (contains KIAA0564 and FLJ21779) possible ortholog of RIKEN cDNA 1300010F03 gene, a lysyl-tRNA synthetase (KARS) pseudogene, a ribosomal protein S28 (RPS28) pseudogene and 2 CpG islands, complete sequence Length = 163511 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 134 taaaaataaataaaaatcaatgct 157 ||||||||||||||||| |||||| Sbjct: 95939 taaaaataaataaaaattaatgct 95962
>emb|AL391277.16| Human DNA sequence from clone RP11-357C3 on chromosome X, complete sequence Length = 194456 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 130 tatctaaaaataaataaaaa 149 |||||||||||||||||||| Sbjct: 156450 tatctaaaaataaataaaaa 156469
>emb|AL158055.12| Human DNA sequence from clone RP11-348F1 on chromosome Xp11.1-11.22 Contains the NUDT11 gene for nudix (nucleoside diphosphate linked moiety X)-type motif 11, two novel genes, the NUDT10 gene for nudix (nucleoside diphosphate linked moiety X)-type motif 10 and three CpG islands, complete sequence Length = 184873 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 134 taaaaataaataaaaatcaa 153 |||||||||||||||||||| Sbjct: 1802 taaaaataaataaaaatcaa 1821
>emb|AL138707.10| Human DNA sequence from clone RP11-430M15 on chromosome 13 Contains the 3' end of a novel gene (FLJ22153) and the 3' end of the gene for a novel protein (ortholog of rat putative four repeat ion channel), complete sequence Length = 181311 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 131 atctaaaaataaataaaaat 150 |||||||||||||||||||| Sbjct: 121749 atctaaaaataaataaaaat 121730
>emb|AL049564.11|HSDJ808O4 Human DNA sequence from clone RP4-808O4 on chromosome Xq11.1-12 Contains the 5' end of the AR gene for androgen receptor (dihydrotestosterone receptor; testicular feminization; spinal and bulbar muscular atrophy; Kennedy disease), a poly(A) binding protein, nuclear 1 (PABPN1) pseudogene and two CpG islands, complete sequence Length = 139033 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 135 aaaaataaataaaaatcaat 154 |||||||||||||||||||| Sbjct: 63417 aaaaataaataaaaatcaat 63436
>emb|AL035530.11|HS111C20 Human DNA sequence from clone RP1-111C20 on chromosome 6q25.3-27 Contains the gene for radial spoke protein 3 (RSP3), the TAGP gene for T-cell activation GTPase activating protein, a novel gene and a CpG island, complete sequence Length = 108460 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 134 taaaaataaataaaaatcaa 153 |||||||||||||||||||| Sbjct: 89793 taaaaataaataaaaatcaa 89812
>gb|AC099742.2| Papio anubis clone RP41-167P22, complete sequence Length = 171612 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 135 aaaaataaataaaaatcaat 154 |||||||||||||||||||| Sbjct: 102964 aaaaataaataaaaatcaat 102983
>gb|AC022795.9| Homo sapiens chromosome 18, clone RP11-254G11, complete sequence Length = 158003 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 134 taaaaataaataaaaatcaa 153 |||||||||||||||||||| Sbjct: 64200 taaaaataaataaaaatcaa 64219
>emb|AL929359.1|PFA929359 Plasmodium falciparum strain 3D7, chromosome 9; segment 5/5 Length = 281723 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 131 atctaaaaataaataaaaat 150 |||||||||||||||||||| Sbjct: 34765 atctaaaaataaataaaaat 34784
>gb|AC152392.6| Mus musculus chromosome 1, clone RP23-300P10, complete sequence Length = 225267 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 134 taaaaataaataaaaatcaa 153 |||||||||||||||||||| Sbjct: 172671 taaaaataaataaaaatcaa 172690
>emb|AJ515015.1|CRA515015 Caulerpa racemosa var. racemosa plastid ycf10-chlB intergenic spacer, isolate 5 Length = 1002 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 135 aaaaataaataaaaatcaat 154 |||||||||||||||||||| Sbjct: 30 aaaaataaataaaaatcaat 49
>emb|AJ515014.1|CRA515014 Caulerpa racemosa var. racemosa plastid ycf10-chlB intergenic spacer, isolate 4 Length = 1002 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 135 aaaaataaataaaaatcaat 154 |||||||||||||||||||| Sbjct: 30 aaaaataaataaaaatcaat 49
>emb|AJ515013.1|CRA515013 Caulerpa racemosa var. racemosa plastid ycf10-chlB intergenic spacer, isolate 3 Length = 1002 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 135 aaaaataaataaaaatcaat 154 |||||||||||||||||||| Sbjct: 30 aaaaataaataaaaatcaat 49
>emb|AJ515012.1|CRA515012 Caulerpa racemosa var. racemosa plastid ycf10-chlB intergenic spacer, isolate 2 Length = 1002 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 135 aaaaataaataaaaatcaat 154 |||||||||||||||||||| Sbjct: 30 aaaaataaataaaaatcaat 49
>emb|AJ515011.1|CRA515011 Caulerpa racemosa var. racemosa plastid ycf10-chlB intergenic spacer, isolate 1 Length = 1002 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 135 aaaaataaataaaaatcaat 154 |||||||||||||||||||| Sbjct: 30 aaaaataaataaaaatcaat 49
>gb|AC161890.4| Mus musculus 6 BAC RP23-356P12 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 243990 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 149 atcaatgctagctctgctag 168 |||||||||||||||||||| Sbjct: 54553 atcaatgctagctctgctag 54534
>emb|BX640499.5| Zebrafish DNA sequence from clone DKEYP-67D2 in linkage group 9, complete sequence Length = 184606 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 135 aaaaataaataaaaatcaat 154 |||||||||||||||||||| Sbjct: 97606 aaaaataaataaaaatcaat 97625
>emb|BX000348.22| Zebrafish DNA sequence from clone DKEY-94L16 in linkage group 12, complete sequence Length = 158133 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 135 aaaaataaataaaaatcaat 154 |||||||||||||||||||| Sbjct: 133030 aaaaataaataaaaatcaat 133049
>emb|BX548067.34| Zebrafish DNA sequence from clone DKEY-261O4 in linkage group 5, complete sequence Length = 181547 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 135 aaaaataaataaaaatcaat 154 |||||||||||||||||||| Sbjct: 137604 aaaaataaataaaaatcaat 137585
>emb|AL929016.5| Zebrafish DNA sequence from clone DKEY-24J9 in linkage group 4 Contains the gene for a novel protein (zgc:63880), the 3' end of the gene for a novel protein similar to vertebrate KCND2, the 5' end of the ing3 gene for inhibitor of growth family member 3 and a CpG island, complete sequence Length = 200582 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 133 ctaaaaataaataaaaatca 152 |||||||||||||||||||| Sbjct: 194242 ctaaaaataaataaaaatca 194261
>emb|BX927249.5| Zebrafish DNA sequence from clone CH211-273E21 in linkage group 5, complete sequence Length = 54421 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 131 atctaaaaataaataaaaat 150 |||||||||||||||||||| Sbjct: 24844 atctaaaaataaataaaaat 24825
>emb|CR388098.7| Zebrafish DNA sequence from clone DKEY-12J14 in linkage group 13, complete sequence Length = 192818 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 135 aaaaataaataaaaatcaat 154 |||||||||||||||||||| Sbjct: 114226 aaaaataaataaaaatcaat 114207
>gb|AC158140.9| Mus musculus chromosome 8, clone RP24-267F22, complete sequence Length = 169796 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 135 aaaaataaataaaaatcaat 154 |||||||||||||||||||| Sbjct: 160705 aaaaataaataaaaatcaat 160724
>gb|AC090195.5| Homo sapiens chromosome 8, clone RP11-366K18, complete sequence Length = 121721 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 131 atctaaaaataaataaaaat 150 |||||||||||||||||||| Sbjct: 13263 atctaaaaataaataaaaat 13244
>gb|AC010017.5| Drosophila melanogaster 3L BAC RP98-2C22 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 182960 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 129 gtatctaaaaataaataaaa 148 |||||||||||||||||||| Sbjct: 80277 gtatctaaaaataaataaaa 80258
>gb|AC024681.12| Homo sapiens chromosome 8, clone RP11-622O11, complete sequence Length = 194516 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 130 tatctaaaaataaataaaaa 149 |||||||||||||||||||| Sbjct: 106257 tatctaaaaataaataaaaa 106238
>gb|AC067750.5| Homo sapiens chromosome 10 clone RP11-359E3, complete sequence Length = 203205 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 134 taaaaataaataaaaatcaa 153 |||||||||||||||||||| Sbjct: 64164 taaaaataaataaaaatcaa 64145
>emb|BX510352.17| Zebrafish DNA sequence from clone DKEY-96J11 in linkage group 18, complete sequence Length = 152387 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 135 aaaaataaataaaaatcaat 154 |||||||||||||||||||| Sbjct: 72695 aaaaataaataaaaatcaat 72714
>emb|CR382369.5| Zebrafish DNA sequence from clone CH211-67O23 in linkage group 22, complete sequence Length = 27541 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 130 tatctaaaaataaataaaaa 149 |||||||||||||||||||| Sbjct: 27405 tatctaaaaataaataaaaa 27424
>gb|AC025627.13| Homo sapiens chromosome 17, clone RP11-1113L8, complete sequence Length = 149866 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 131 atctaaaaataaataaaaat 150 |||||||||||||||||||| Sbjct: 13049 atctaaaaataaataaaaat 13030
>gb|DP000059.1| Carollia perspicillata target 117 genomic scaffold Length = 359132 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 132 tctaaaaataaataaaaatc 151 |||||||||||||||||||| Sbjct: 161890 tctaaaaataaataaaaatc 161909
>gb|AC183492.1| Brassica oleracea Contig G, complete sequence Length = 236640 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 131 atctaaaaataaataaaaat 150 |||||||||||||||||||| Sbjct: 80133 atctaaaaataaataaaaat 80152
>gb|AC084082.5| Homo sapiens chromosome 8, clone RP11-220B24, complete sequence Length = 187204 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 131 atctaaaaataaataaaaat 150 |||||||||||||||||||| Sbjct: 7992 atctaaaaataaataaaaat 8011
>gb|AC009638.9| Homo sapiens chromosome 11, clone RP11-47K5, complete sequence Length = 157610 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 134 taaaaataaataaaaatcaa 153 |||||||||||||||||||| Sbjct: 146622 taaaaataaataaaaatcaa 146641
>gb|AC090648.5| Genomic sequence for Mus musculus, clone RP23-331I23, complete sequence Length = 198695 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 131 atctaaaaataaataaaaat 150 |||||||||||||||||||| Sbjct: 152929 atctaaaaataaataaaaat 152910
>gb|BC020846.1|BC020846 Homo sapiens, Similar to hypothetical protein FLJ13381, clone IMAGE:4719554, mRNA Length = 1600 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 213 ctttaattgctaggtttaac 232 |||||||||||||||||||| Sbjct: 1015 ctttaattgctaggtttaac 1034
>ref|XM_696173.1| PREDICTED: Danio rerio similar to myosin, heavy polypeptide 9, non-muscle (LOC572454), partial mRNA Length = 1175 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 240 gctgacactccagctgcttc 259 |||||||||||||||||||| Sbjct: 811 gctgacactccagctgcttc 792
>ref|XM_693590.1| PREDICTED: Danio rerio similar to Zinc finger protein 198 (Fused in myeloproliferative disorders protein) (Rearranged in atypical myeloproliferative disorder protein) (LOC570149), mRNA Length = 4049 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 362 tccatctgcagaagagtcac 381 |||||||||||||||||||| Sbjct: 164 tccatctgcagaagagtcac 183
>gb|DP000051.1| Carollia perspicillata target 126 genomic scaffold Length = 501879 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 132 tctaaaaataaataaaaatc 151 |||||||||||||||||||| Sbjct: 126237 tctaaaaataaataaaaatc 126256
>emb|BX511060.7| Zebrafish DNA sequence from clone CH211-210L19 in linkage group 10, complete sequence Length = 139250 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 134 taaaaataaataaaaatcaa 153 |||||||||||||||||||| Sbjct: 40685 taaaaataaataaaaatcaa 40704
>emb|BX666062.6| Zebrafish DNA sequence from clone DKEY-99O18 in linkage group 2, complete sequence Length = 233488 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 137 aaataaataaaaatcaatgc 156 |||||||||||||||||||| Sbjct: 1035 aaataaataaaaatcaatgc 1054
>gb|AC090649.4| Genomic sequence for Mus musculus, clone RP23-361O12, complete sequence Length = 211611 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 131 atctaaaaataaataaaaat 150 |||||||||||||||||||| Sbjct: 186436 atctaaaaataaataaaaat 186455
>gb|AC149050.2| Medicago truncatula chromosome 7 BAC clone mth2-6j14, complete sequence Length = 119126 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 128 agtatctaaaaataaataaaaatc 151 |||||||||||| ||||||||||| Sbjct: 46013 agtatctaaaaaaaaataaaaatc 46036
>emb|AL929261.27| Zebrafish DNA sequence from clone CH211-245H5 in linkage group 24, complete sequence Length = 193600 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 136 aaaataaataaaaatcaatg 155 |||||||||||||||||||| Sbjct: 47914 aaaataaataaaaatcaatg 47933
>gb|AC156988.6| Mus musculus chromosome 1, clone RP23-362H15, complete sequence Length = 148819 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 134 taaaaataaataaaaatcaa 153 |||||||||||||||||||| Sbjct: 76398 taaaaataaataaaaatcaa 76379
>gb|AC113761.6| Rattus norvegicus X BAC CH230-91H16 (Children's Hospital Oakland Research Institute) complete sequence Length = 232930 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 135 aaaaataaataaaaatcaat 154 |||||||||||||||||||| Sbjct: 230265 aaaaataaataaaaatcaat 230284
>gb|AE003821.4| Drosophila melanogaster chromosome 2R, section 29 of 73 of the complete sequence Length = 294168 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 134 taaaaataaataaaaatcaa 153 |||||||||||||||||||| Sbjct: 250080 taaaaataaataaaaatcaa 250099
>gb|AC153905.5| Mus musculus 6 BAC RP23-215A7 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 215955 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 478 cccagcactgcaagaagtga 497 |||||||||||||||||||| Sbjct: 190172 cccagcactgcaagaagtga 190153
>gb|AC157499.2| Pan troglodytes BAC clone CH251-379O4 from chromosome unknown, complete sequence Length = 156656 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 134 taaaaataaataaaaatcaa 153 |||||||||||||||||||| Sbjct: 93250 taaaaataaataaaaatcaa 93231
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 306 acccttcggttgcaaggtccatga 329 ||||||| |||||||||||||||| Sbjct: 12770400 acccttctgttgcaaggtccatga 12770377
>gb|AC158807.11| Mus musculus 10 BAC RP24-64G24 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 228073 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 134 taaaaataaataaaaatcaa 153 |||||||||||||||||||| Sbjct: 27107 taaaaataaataaaaatcaa 27088
>gb|AC025417.4|AC025417 Genomic sequence for Arabidopsis thaliana BAC T12C24 from chromosome I, complete sequence Length = 106142 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 134 taaaaataaataaaaatcaa 153 |||||||||||||||||||| Sbjct: 53146 taaaaataaataaaaatcaa 53165
>gb|AC007389.7| Homo sapiens BAC clone RP11-418H16 from 2, complete sequence Length = 209197 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 134 taaaaataaataaaaatcaa 153 |||||||||||||||||||| Sbjct: 19619 taaaaataaataaaaatcaa 19600
>gb|AC116961.2| Dictyostelium discoideum chromosome 2 map 369654-374956 strain AX4, complete sequence Length = 5302 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 130 tatctaaaaataaataaaaa 149 |||||||||||||||||||| Sbjct: 2988 tatctaaaaataaataaaaa 3007
>gb|AC007823.38| Homo sapiens 3 BAC RP11-255C15 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 127759 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 135 aaaaataaataaaaatcaat 154 |||||||||||||||||||| Sbjct: 115387 aaaaataaataaaaatcaat 115368
>gb|AC130449.2| Homo sapiens chromosome 16 clone CTA-233A7, complete sequence Length = 175104 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 130 tatctaaaaataaataaaaa 149 |||||||||||||||||||| Sbjct: 44065 tatctaaaaataaataaaaa 44084
>dbj|BA000011.4| Thermoplasma volcanium GSS1 DNA, complete genome Length = 1584804 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 131 atctaaaaataaataaaaat 150 |||||||||||||||||||| Sbjct: 1104490 atctaaaaataaataaaaat 1104509
>dbj|AP005477.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBb0039F24 Length = 132107 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 306 acccttcggttgcaaggtccatga 329 ||||||| |||||||||||||||| Sbjct: 123921 acccttctgttgcaaggtccatga 123898
>dbj|AP004811.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0019A05 Length = 144255 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 306 acccttcggttgcaaggtccatga 329 ||||||| |||||||||||||||| Sbjct: 71177 acccttctgttgcaaggtccatga 71154
>emb|BX248311.6| Zebrafish DNA sequence from clone BUSM1-71F1 in linkage group 9, complete sequence Length = 143593 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 135 aaaaataaataaaaatcaat 154 |||||||||||||||||||| Sbjct: 45897 aaaaataaataaaaatcaat 45916
>emb|BX072573.5| Zebrafish DNA sequence from clone DKEY-16I6, complete sequence Length = 207797 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 135 aaaaataaataaaaatcaat 154 |||||||||||||||||||| Sbjct: 112091 aaaaataaataaaaatcaat 112110
>emb|AL954634.12| Zebrafish DNA sequence from clone DKEY-58C20 in linkage group 14, complete sequence Length = 195499 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 135 aaaaataaataaaaatcaat 154 |||||||||||||||||||| Sbjct: 135798 aaaaataaataaaaatcaat 135817
>emb|BX322567.4| Zebrafish DNA sequence from clone CH211-240G9 in linkage group 18, complete sequence Length = 169628 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 135 aaaaataaataaaaatcaat 154 |||||||||||||||||||| Sbjct: 127959 aaaaataaataaaaatcaat 127978
>emb|AL627435.19| Mouse DNA sequence from clone RP23-3M14 on chromosome X, complete sequence Length = 199970 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 134 taaaaataaataaaaatcaa 153 |||||||||||||||||||| Sbjct: 124743 taaaaataaataaaaatcaa 124762
>emb|BX649610.5| Zebrafish DNA sequence from clone CH211-170D11 in linkage group 18, complete sequence Length = 150831 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 134 taaaaataaataaaaatcaa 153 |||||||||||||||||||| Sbjct: 15974 taaaaataaataaaaatcaa 15993
>emb|BX571820.5| Zebrafish DNA sequence from clone DKEY-14G9 in linkage group 19, complete sequence Length = 148354 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 137 aaataaataaaaatcaatgc 156 |||||||||||||||||||| Sbjct: 125875 aaataaataaaaatcaatgc 125894
>emb|BX465868.6| Zebrafish DNA sequence from clone DKEY-42I9 in linkage group 22, complete sequence Length = 222195 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 127 cagtatctaaaaataaataaaaat 150 |||||||||| ||||||||||||| Sbjct: 67640 cagtatctaataataaataaaaat 67663
>gb|AC103935.10| Mus musculus chromosome 8, clone RP23-431O7, complete sequence Length = 205702 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 131 atctaaaaataaataaaaat 150 |||||||||||||||||||| Sbjct: 55924 atctaaaaataaataaaaat 55905
>gb|AC007453.1|AC007453 Drosophila melanogaster, chromosome 2R, region 49C1-49D3, P1 clones DS04499, DS06146, and DS00455, complete sequence Length = 145055 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 134 taaaaataaataaaaatcaa 153 |||||||||||||||||||| Sbjct: 71760 taaaaataaataaaaatcaa 71779
>gb|AE003594.3| Drosophila melanogaster chromosome 3L, section 75 of 83 of the complete sequence Length = 314904 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 129 gtatctaaaaataaataaaa 148 |||||||||||||||||||| Sbjct: 8558 gtatctaaaaataaataaaa 8577
>gb|AC006227.1|AC006227 Homo sapiens, clone hRPK.16_A_1, complete sequence Length = 153337 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 130 tatctaaaaataaataaaaatcaa 153 ||||||| |||||||||||||||| Sbjct: 92184 tatctaataataaataaaaatcaa 92207
>gb|AC101699.9| Mus musculus chromosome 1, clone RP23-244H18, complete sequence Length = 173113 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 tctaaaaataaataaaaatc 151 |||||||||||||||||||| Sbjct: 124737 tctaaaaataaataaaaatc 124718
>gb|AC101547.9| Mus musculus chromosome 5, clone RP23-193C5, complete sequence Length = 185061 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 135 aaaaataaataaaaatcaat 154 |||||||||||||||||||| Sbjct: 180392 aaaaataaataaaaatcaat 180373
>gb|AC087780.19| Mus musculus strain C57BL/6J chromosome 1 clone rp23-324b17, complete sequence Length = 206924 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 130 tatctaaaaataaataaaaatcaa 153 ||||||||||||||||| |||||| Sbjct: 31587 tatctaaaaataaataagaatcaa 31564
>emb|BX255949.3| Zebrafish DNA sequence from clone DKEY-76F5 in linkage group 2, complete sequence Length = 214484 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 137 aaataaataaaaatcaatgc 156 |||||||||||||||||||| Sbjct: 121759 aaataaataaaaatcaatgc 121778
>gb|AC153601.6| Mus musculus 6 BAC RP23-405O6 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 201911 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 478 cccagcactgcaagaagtga 497 |||||||||||||||||||| Sbjct: 21507 cccagcactgcaagaagtga 21488
>emb|AL929141.7| Zebrafish DNA sequence from clone CH211-149P5 in linkage group 18, complete sequence Length = 182116 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 134 taaaaataaataaaaatcaa 153 |||||||||||||||||||| Sbjct: 171426 taaaaataaataaaaatcaa 171445
>emb|AL807377.10| Zebrafish DNA sequence from clone CH211-229G3, complete sequence Length = 170231 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 130 tatctaaaaataaataaaaatcaa 153 |||| ||||||||||||||||||| Sbjct: 167093 tatcaaaaaataaataaaaatcaa 167070
>emb|AL133370.4|CNS01DUV Human chromosome 14 DNA sequence BAC C-2566J3 of library CalTech-D from chromosome 14 of Homo sapiens (Human), complete sequence Length = 155822 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 213 ctttaattgctaggtttaac 232 |||||||||||||||||||| Sbjct: 29959 ctttaattgctaggtttaac 29940
>gb|AC036178.11| Homo sapiens chromosome 18, clone RP11-666N19, complete sequence Length = 135640 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 134 taaaaataaataaaaatcaa 153 |||||||||||||||||||| Sbjct: 126905 taaaaataaataaaaatcaa 126924 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,992,702 Number of Sequences: 3902068 Number of extensions: 5992702 Number of successful extensions: 238186 Number of sequences better than 10.0: 148 Number of HSP's better than 10.0 without gapping: 148 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 237263 Number of HSP's gapped (non-prelim): 923 length of query: 519 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 496 effective length of database: 17,143,297,704 effective search space: 8503075661184 effective search space used: 8503075661184 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
