ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart23e02
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AF411228.1|AF411228 Hordeum vulgare ascorbate peroxidase mRNA... 315 6e-83
2gb|BT009090.1| Triticum aestivum clone wkm2c.pk0002.f7:fis, full... 174 1e-40
3emb|AL137857.29| Human DNA sequence from clone RP5-1166H10 on ch... 44 0.31
4ref|NM_179518.1| Arabidopsis thaliana unknown protein AT1G66345 ... 42 1.2
5ref|NM_202299.1| Arabidopsis thaliana unknown protein AT1G54575 ... 42 1.2
6gb|AY773826.1| Arabidopsis thaliana clone pENTR221-At1g54575 hyp... 42 1.2
7gb|AY735542.1| Arabidopsis thaliana hypothetical protein AT1G545... 42 1.2
8gb|BT015723.1| Arabidopsis thaliana At1g54575 gene, complete cds 42 1.2
9gb|BT015058.1| Arabidopsis thaliana At1g54575 gene, complete cds 42 1.2
10gb|AY281155.1| Entamoeba dispar clone D13 Ehssp1-like gene, comp... 42 1.2
11gb|AY278996.1| Entamoeba dispar clone D14 Ehssp1-like gene, comp... 42 1.2
12dbj|AK221685.1| Arabidopsis thaliana mRNA for hypothetical prote... 42 1.2
13gb|AC005388.1|T22H22 Sequence of BAC T22H22 from Arabidopsis tha... 42 1.2
14gb|AC019176.4|AC019176 Homo sapiens BAC clone RP11-221H10 from 8... 42 1.2
15emb|BX818219.1|CNS0AE3B Arabidopsis thaliana Full-length cDNA Co... 42 1.2
16emb|BX818269.1|CNS0AB1D Arabidopsis thaliana Full-length cDNA Co... 42 1.2
17emb|BX817787.1|CNS0AAX6 Arabidopsis thaliana Full-length cDNA Co... 42 1.2
18gb|AC020665.6|AC020665 Arabidopsis thaliana chromosome 1 BAC T27... 42 1.2
19gb|AC165074.2| Mus musculus BAC clone RP24-501F1 from chromosome... 40 4.9
20gb|AC163297.4| Mus musculus BAC clone RP23-106G24 from chromosom... 40 4.9
21gb|AC151982.4| Mus musculus BAC clone RP23-445J16 from chromosom... 40 4.9
22gb|AC168204.1| Medicago truncatula chromosome 7 BAC clone mth2-6... 40 4.9
23ref|XM_642880.1| Entamoeba histolytica HM-1:IMSS hypothetical pr... 40 4.9
24gb|AC116748.8| Mus musculus chromosome 9, clone RP23-80L8, compl... 40 4.9
25emb|AL683819.19| Mouse DNA sequence from clone RP23-126J10 on ch... 40 4.9
26gb|AC139355.8| Medicago truncatula clone mth2-36o3, complete seq... 40 4.9
27ref|NM_166603.1| Drosophila melanogaster CG3530-RA, transcript v... 40 4.9
28dbj|AK140738.1| Mus musculus adult male corpus striatum cDNA, RI... 40 4.9
29gb|AC150894.4| Mus musculus BAC clone RP24-409D4 from chromosome... 40 4.9
30dbj|AK044837.1| Mus musculus 9.5 days embryo parthenogenote cDNA... 40 4.9
31dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.9
32gb|AC009257.3|AC009257 Drosophila melanogaster, chromosome 2R, r... 40 4.9
33gb|AC008304.3|AC008304 Drosophila melanogaster, chromosome 2R, r... 40 4.9
34gb|BT003304.1| Drosophila melanogaster GH09546 full insert cDNA 40 4.9
35dbj|AP005414.3| Oryza sativa (japonica cultivar-group) genomic D... 40 4.9
36gb|AE003460.2| Drosophila melanogaster chromosome 2R, section 68... 40 4.9
37gb|AC119978.7| Mus musculus chromosome 9, clone RP24-487D12, com... 40 4.9
38emb|CT010457.7| Mouse DNA sequence from clone RP23-96M8 on chrom... 40 4.9
39emb|AL672248.13| Mouse DNA sequence from clone RP23-82A12 on chr... 40 4.9 
>gb|AF411228.1|AF411228 Hordeum vulgare ascorbate peroxidase mRNA, complete cds
          Length = 1138

 Score =  315 bits (159), Expect = 6e-83
 Identities = 174/179 (97%)
 Strand = Plus / Minus

                                                                        
Query: 34   catttcgccctcgacagggaaaaacaaccggaaaggaactacataacacttagcggttca 93
            |||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1116 catttcgttctcgacagggaaaaacaaccggaaaggaactacataacacttagcggttca 1057

                                                                        
Query: 94   cactacaagcaggtccatcacaaaatacgaggcgtcaaaagcaaaacaatgcaacacccc 153
            ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 1056 cactacaagcaggtccatcacaagatacgaggcgtcaaaagcaaaacaatgcaacacccc 997

                                                                       
Query: 154  atcgaccgaccgatttaatccaaatccaaacaaacacatgacatggccactgggccgac 212
            |||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 996  atcgaccgaccgatctaatccaaatccagacaaacacatgacatggccactgggccgac 938



 Score =  123 bits (62), Expect = 4e-25
 Identities = 74/78 (94%)
 Strand = Plus / Minus

                                                                       
Query: 291 attaccgaccctcaggcgccgattttgaatcagcagcagccctcaaacgcctcgccgaat 350
           ||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||
Sbjct: 877 attaccgaccctcaggcgccgatcttgaatcagcagcagccctcagacgcctcgccgaat 818

                             
Query: 351 ccaagttcaaaaagcttg 368
           ||||||||| | ||||||
Sbjct: 817 ccaagttcagagagcttg 800
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>gb|BT009090.1| Triticum aestivum clone wkm2c.pk0002.f7:fis, full insert mRNA
           sequence
          Length = 973

 Score =  174 bits (88), Expect = 1e-40
 Identities = 128/140 (91%), Gaps = 1/140 (0%)
 Strand = Plus / Minus

                                                                       
Query: 58  caaccggaaaggaactacataacacttagcggttcacactacaagcaggtccatcacaaa 117
           ||||||||||||||||||||||||||| || ||||| |||||||||| | ||||||||| 
Sbjct: 874 caaccggaaaggaactacataacacttggcagttcatactacaagcacgcccatcacaag 815

                                                                       
Query: 118 atacgaggcgtcaaaagcaaaacaatgcaacaccccatcgaccgaccgatttaatccaaa 177
           | ||||||||||||| ||||||||||||||||||||||||||||||| || |||||||| 
Sbjct: 814 acacgaggcgtcaaa-gcaaaacaatgcaacaccccatcgaccgacccatctaatccaag 756

                               
Query: 178 tccaaacaaacacatgacat 197
           |||| |||||||||||||||
Sbjct: 755 tccagacaaacacatgacat 736



 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 55/62 (88%)
 Strand = Plus / Minus

                                                                       
Query: 291 attaccgaccctcaggcgccgattttgaatcagcagcagccctcaaacgcctcgccgaat 350
           |||| ||||| |||||||||||  ||||||||||||||||||||||  |||||||| |||
Sbjct: 694 attaacgaccttcaggcgccgagcttgaatcagcagcagccctcaacagcctcgccaaat 635

             
Query: 351 cc 352
           ||
Sbjct: 634 cc 633
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>emb|AL137857.29| Human DNA sequence from clone RP5-1166H10 on chromosome 1p33-35.1
             Contains the MATN1 gene for matrilin 1 cartilage matrix
             protein, a novel gene (FLJ46197, FLJ33163), the 3' end of
             the gene for Lysosomal-associated multispanning membrane
             protein-5 (LAPTM5) and a CpG island, complete sequence
          Length = 152042

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 132   aagcaaaacaatgcaacacccc 153
             ||||||||||||||||||||||
Sbjct: 34235 aagcaaaacaatgcaacacccc 34256
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>ref|NM_179518.1| Arabidopsis thaliana unknown protein AT1G66345 mRNA, complete cds
          Length = 1635

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 169 taatccaaatccaaacaaaca 189
           |||||||||||||||||||||
Sbjct: 114 taatccaaatccaaacaaaca 134
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>ref|NM_202299.1| Arabidopsis thaliana unknown protein AT1G54575 mRNA, complete cds
          Length = 638

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 127 gtcaaaagcaaaacaatgcaacacc 151
           |||||||||||||||||| ||||||
Sbjct: 221 gtcaaaagcaaaacaatgaaacacc 245
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>gb|AY773826.1| Arabidopsis thaliana clone pENTR221-At1g54575 hypothetical protein
           (At1g54575) gene, complete cds
          Length = 309

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 127 gtcaaaagcaaaacaatgcaacacc 151
           |||||||||||||||||| ||||||
Sbjct: 188 gtcaaaagcaaaacaatgaaacacc 212
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>gb|AY735542.1| Arabidopsis thaliana hypothetical protein AT1G54575 mRNA, complete
           cds
          Length = 670

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 127 gtcaaaagcaaaacaatgcaacacc 151
           |||||||||||||||||| ||||||
Sbjct: 234 gtcaaaagcaaaacaatgaaacacc 258
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>gb|BT015723.1| Arabidopsis thaliana At1g54575 gene, complete cds
          Length = 309

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 127 gtcaaaagcaaaacaatgcaacacc 151
           |||||||||||||||||| ||||||
Sbjct: 188 gtcaaaagcaaaacaatgaaacacc 212
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>gb|BT015058.1| Arabidopsis thaliana At1g54575 gene, complete cds
          Length = 573

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 127 gtcaaaagcaaaacaatgcaacacc 151
           |||||||||||||||||| ||||||
Sbjct: 198 gtcaaaagcaaaacaatgaaacacc 222
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>gb|AY281155.1| Entamoeba dispar clone D13 Ehssp1-like gene, complete sequence
          Length = 1044

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 169 taatccaaatccaaacaaaca 189
           |||||||||||||||||||||
Sbjct: 914 taatccaaatccaaacaaaca 894
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>gb|AY278996.1| Entamoeba dispar clone D14 Ehssp1-like gene, complete sequence
          Length = 1081

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 169 taatccaaatccaaacaaaca 189
           |||||||||||||||||||||
Sbjct: 953 taatccaaatccaaacaaaca 933
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>dbj|AK221685.1| Arabidopsis thaliana mRNA for hypothetical protein, complete cds,
           clone: RAFL14-90-M11
          Length = 654

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 127 gtcaaaagcaaaacaatgcaacacc 151
           |||||||||||||||||| ||||||
Sbjct: 234 gtcaaaagcaaaacaatgaaacacc 258
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>gb|AC005388.1|T22H22 Sequence of BAC T22H22 from Arabidopsis thaliana chromosome 1, complete
             sequence
          Length = 87768

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 127   gtcaaaagcaaaacaatgcaacacc 151
             |||||||||||||||||| ||||||
Sbjct: 15805 gtcaaaagcaaaacaatgaaacacc 15829
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>gb|AC019176.4|AC019176 Homo sapiens BAC clone RP11-221H10 from 8, complete sequence
          Length = 170680

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 127   gtcaaaagcaaaacaatgcaa 147
             |||||||||||||||||||||
Sbjct: 63442 gtcaaaagcaaaacaatgcaa 63462
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>emb|BX818219.1|CNS0AE3B Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL67ZF04 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 631

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 127 gtcaaaagcaaaacaatgcaacacc 151
           |||||||||||||||||| ||||||
Sbjct: 214 gtcaaaagcaaaacaatgaaacacc 238
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>emb|BX818269.1|CNS0AB1D Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL6ZF07 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 599

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 127 gtcaaaagcaaaacaatgcaacacc 151
           |||||||||||||||||| ||||||
Sbjct: 205 gtcaaaagcaaaacaatgaaacacc 229
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>emb|BX817787.1|CNS0AAX6 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL41ZD08 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 630

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 127 gtcaaaagcaaaacaatgcaacacc 151
           |||||||||||||||||| ||||||
Sbjct: 221 gtcaaaagcaaaacaatgaaacacc 245
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>gb|AC020665.6|AC020665 Arabidopsis thaliana chromosome 1 BAC T27F4 genomic sequence, complete
             sequence
          Length = 85702

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 169   taatccaaatccaaacaaaca 189
             |||||||||||||||||||||
Sbjct: 39479 taatccaaatccaaacaaaca 39499
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>gb|AC165074.2| Mus musculus BAC clone RP24-501F1 from chromosome 12, complete sequence
          Length = 166016

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 170    aatccaaatccaaacaaaca 189
              ||||||||||||||||||||
Sbjct: 129942 aatccaaatccaaacaaaca 129923
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>gb|AC163297.4| Mus musculus BAC clone RP23-106G24 from chromosome 3, complete sequence
          Length = 194271

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 348    aatccaagttcaaaaagctt 367
              ||||||||||||||||||||
Sbjct: 157306 aatccaagttcaaaaagctt 157287
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>gb|AC151982.4| Mus musculus BAC clone RP23-445J16 from chromosome 12, complete sequence
          Length = 183898

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 170    aatccaaatccaaacaaaca 189
              ||||||||||||||||||||
Sbjct: 174352 aatccaaatccaaacaaaca 174371
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>gb|AC168204.1| Medicago truncatula chromosome 7 BAC clone mth2-64h15, complete
             sequence
          Length = 45758

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 171   atccaaatccaaacaaacac 190
             ||||||||||||||||||||
Sbjct: 27167 atccaaatccaaacaaacac 27186
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>ref|XM_642880.1| Entamoeba histolytica HM-1:IMSS hypothetical protein (678.t00001)
           partial mRNA
          Length = 501

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 168 ttaatccaaatccaaacaaa 187
           ||||||||||||||||||||
Sbjct: 358 ttaatccaaatccaaacaaa 339
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>gb|AC116748.8| Mus musculus chromosome 9, clone RP23-80L8, complete sequence
          Length = 268886

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 170   aatccaaatccaaacaaaca 189
             ||||||||||||||||||||
Sbjct: 68837 aatccaaatccaaacaaaca 68856
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>emb|AL683819.19| Mouse DNA sequence from clone RP23-126J10 on chromosome 11 Contains
             part of the Car10 gene for carbonic anhydrase 10, complete
             sequence
          Length = 134741

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 170   aatccaaatccaaacaaaca 189
             ||||||||||||||||||||
Sbjct: 74562 aatccaaatccaaacaaaca 74543
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>gb|AC139355.8| Medicago truncatula clone mth2-36o3, complete sequence
          Length = 108135

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 171    atccaaatccaaacaaacac 190
              ||||||||||||||||||||
Sbjct: 106534 atccaaatccaaacaaacac 106515
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>ref|NM_166603.1| Drosophila melanogaster CG3530-RA, transcript variant A (CG3530),
           mRNA
          Length = 3048

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 311 gattttgaatcagcagcagc 330
           ||||||||||||||||||||
Sbjct: 220 gattttgaatcagcagcagc 201
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>dbj|AK140738.1| Mus musculus adult male corpus striatum cDNA, RIKEN full-length
            enriched library, clone:C030045C09
            product:unclassifiable, full insert sequence
          Length = 2915

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 170  aatccaaatccaaacaaaca 189
            ||||||||||||||||||||
Sbjct: 1622 aatccaaatccaaacaaaca 1603
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>gb|AC150894.4| Mus musculus BAC clone RP24-409D4 from chromosome 3, complete sequence
          Length = 194074

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 348    aatccaagttcaaaaagctt 367
              ||||||||||||||||||||
Sbjct: 171594 aatccaagttcaaaaagctt 171613
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>dbj|AK044837.1| Mus musculus 9.5 days embryo parthenogenote cDNA, RIKEN full-length
            enriched library, clone:B130007F14
            product:unclassifiable, full insert sequence
          Length = 4191

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 348  aatccaagttcaaaaagctt 367
            ||||||||||||||||||||
Sbjct: 2377 aatccaagttcaaaaagctt 2358
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 166      atttaatccaaatccaaaca 185
                ||||||||||||||||||||
Sbjct: 11240675 atttaatccaaatccaaaca 11240694



 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 166      atttaatccaaatccaaaca 185
                ||||||||||||||||||||
Sbjct: 11240476 atttaatccaaatccaaaca 11240495
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>gb|AC009257.3|AC009257 Drosophila melanogaster, chromosome 2R, region 59D-59E, BAC clone
             BACR25I01, complete sequence
          Length = 218565

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 311   gattttgaatcagcagcagc 330
             ||||||||||||||||||||
Sbjct: 27527 gattttgaatcagcagcagc 27546
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>gb|AC008304.3|AC008304 Drosophila melanogaster, chromosome 2R, region 59D2-59D3, BAC clone
              BACR04G19, complete sequence
          Length = 181955

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 311    gattttgaatcagcagcagc 330
              ||||||||||||||||||||
Sbjct: 163167 gattttgaatcagcagcagc 163186
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>gb|BT003304.1| Drosophila melanogaster GH09546 full insert cDNA
          Length = 3059

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 311 gattttgaatcagcagcagc 330
           ||||||||||||||||||||
Sbjct: 220 gattttgaatcagcagcagc 201
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>dbj|AP005414.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBa0073G17
          Length = 162391

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 166   atttaatccaaatccaaaca 185
             ||||||||||||||||||||
Sbjct: 43490 atttaatccaaatccaaaca 43509



 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 166   atttaatccaaatccaaaca 185
             ||||||||||||||||||||
Sbjct: 43291 atttaatccaaatccaaaca 43310
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>gb|AE003460.2| Drosophila melanogaster chromosome 2R, section 68 of 73 of the complete
              sequence
          Length = 299331

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 311    gattttgaatcagcagcagc 330
              ||||||||||||||||||||
Sbjct: 215644 gattttgaatcagcagcagc 215663
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>gb|AC119978.7| Mus musculus chromosome 9, clone RP24-487D12, complete sequence
          Length = 177091

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 170    aatccaaatccaaacaaaca 189
              ||||||||||||||||||||
Sbjct: 149894 aatccaaatccaaacaaaca 149913
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>emb|CT010457.7| Mouse DNA sequence from clone RP23-96M8 on chromosome 9, complete
              sequence
          Length = 259964

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 170    aatccaaatccaaacaaaca 189
              ||||||||||||||||||||
Sbjct: 213510 aatccaaatccaaacaaaca 213529
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>emb|AL672248.13| Mouse DNA sequence from clone RP23-82A12 on chromosome X, complete
             sequence
          Length = 192322

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 174   caaatccaaacaaacacatg 193
             ||||||||||||||||||||
Sbjct: 16386 caaatccaaacaaacacatg 16367


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,427,857
Number of Sequences: 3902068
Number of extensions: 2427857
Number of successful extensions: 49602
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 49474
Number of HSP's gapped (non-prelim): 127
length of query: 368
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 346
effective length of database: 17,147,199,772
effective search space: 5932931121112
effective search space used: 5932931121112
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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