ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart23d12 |
|---|---|
| Clone Library Name | barley_pub |
>CNGT2_ARATH (Q9FIA0) Cytokinin-N-glucosyltransferase 2 (EC 2.4.1.-)| Length = 450 Score = 50.4 bits (119), Expect = 2e-06 Identities = 26/79 (32%), Positives = 43/79 (54%), Gaps = 3/79 (3%) Frame = -3 Query: 469 DQQINSRFMGAVWGSGLDMKDVCERAVVERMVREAMESVE---LRRSAQALAQQVRRDIA 299 DQ +NSRF+ +W G+ ++ E+ +E+ VR ME E +R + L +V + + Sbjct: 372 DQMLNSRFVSDIWKIGIHLEGRIEKKEIEKAVRVLMEESEGNKIRERMKVLKDEVEKSVK 431 Query: 298 QGGSSAKEFKRLVGFIIEL 242 QGGSS + + L I+ L Sbjct: 432 QGGSSFQSIETLANHILLL 450
>CNGT1_ARATH (Q9FI99) Cytokinin-N-glucosyltransferase 1 (EC 2.4.1.-)| Length = 464 Score = 49.7 bits (117), Expect = 4e-06 Identities = 31/86 (36%), Positives = 45/86 (52%), Gaps = 6/86 (6%) Frame = -3 Query: 469 DQQINSRFMGAVWGSGLDMKDVCERAVVERMVREAM---ESVELRRSAQALAQQVRRDIA 299 DQ +N+RF+ VW G+ ++ ER +ER V M + E+R + L +VRR + Sbjct: 379 DQFVNARFISEVWRVGIHLEGRIERREIERAVIRLMVESKGEEIRGRIKVLRDEVRRSVK 438 Query: 298 QGGSSAKEFKRLV---GFIIELSIST 230 QGGSS + LV IIE + T Sbjct: 439 QGGSSYRSLDELVDRISIIIEPLVPT 464
>UFO3_MAIZE (P16167) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115)| (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) (Bronze-1) (Bz-W22 allele) Length = 471 Score = 37.0 bits (84), Expect = 0.026 Identities = 23/76 (30%), Positives = 32/76 (42%), Gaps = 3/76 (3%) Frame = -3 Query: 469 DQQINSRFMGAVWGSGLDMKDVCERAVVERMVREAM---ESVELRRSAQALAQQVRRDIA 299 DQ++N+R + VWG G + A V V E + E +R A+ L V Sbjct: 393 DQRMNARSVAHVWGFGAAFEGAMTSAGVAAAVEELLRGEEGARMRARAKVLQALVAEAFG 452 Query: 298 QGGSSAKEFKRLVGFI 251 GG K F R V + Sbjct: 453 PGGECRKNFDRFVEIV 468
>IAAG_MAIZE (Q41819) Indole-3-acetate beta-glucosyltransferase (EC 2.4.1.121)| (IAA-Glu synthetase) ((Uridine 5'-diphosphate-glucose:indol-3-ylacetyl)-beta-D-glucosyl transferase) Length = 471 Score = 37.0 bits (84), Expect = 0.026 Identities = 26/82 (31%), Positives = 38/82 (46%), Gaps = 9/82 (10%) Frame = -3 Query: 469 DQQINSRFMGAVWGSGLDMK-----DVCERAVVERMVREAMESVE----LRRSAQALAQQ 317 DQ N+R + WG+G+ + V R VER VR M+ E R++A + Sbjct: 383 DQPTNARNVELAWGAGVRARRDAGAGVFLRGEVERCVRAVMDGGEAASAARKAAGEWRDR 442 Query: 316 VRRDIAQGGSSAKEFKRLVGFI 251 R +A GGSS + V F+ Sbjct: 443 ARAAVAPGGSSDRNLDEFVQFV 464
>CZOG_SORBI (Q6JAH0) Putative cis-zeatin O-glucosyltransferase (EC 2.4.1.215)| Length = 466 Score = 36.6 bits (83), Expect = 0.034 Identities = 17/56 (30%), Positives = 33/56 (58%), Gaps = 3/56 (5%) Frame = -3 Query: 409 DVCERAVVERMVREAMES---VELRRSAQALAQQVRRDIAQGGSSAKEFKRLVGFI 251 D+ +++++ EAM S + +R+ A+ L + VR +A GG+S K+ +G+I Sbjct: 409 DIIPAQAIQKVIEEAMLSDSGMAVRQRAKELGEAVRASVADGGNSRKDLDDFIGYI 464
>UFO1_MAIZE (P16166) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115)| (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) (Bronze-1) (Bz-McC allele) Length = 471 Score = 36.6 bits (83), Expect = 0.034 Identities = 23/76 (30%), Positives = 32/76 (42%), Gaps = 3/76 (3%) Frame = -3 Query: 469 DQQINSRFMGAVWGSGLDMKDVCERAVVERMVREAM---ESVELRRSAQALAQQVRRDIA 299 DQ++N+R + VWG G + A V V E + E +R A+ L V Sbjct: 393 DQRMNARSVAHVWGFGAAFEGAMTSAGVATAVEELLRGEEGARMRARAKELQALVAEAFG 452 Query: 298 QGGSSAKEFKRLVGFI 251 GG K F R V + Sbjct: 453 PGGECRKNFDRFVEIV 468
>UFO2_MAIZE (P16165) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115)| (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) (Bronze-1) (Bz-Mc2 allele) Length = 471 Score = 35.8 bits (81), Expect = 0.058 Identities = 23/76 (30%), Positives = 32/76 (42%), Gaps = 3/76 (3%) Frame = -3 Query: 469 DQQINSRFMGAVWGSGLDMKDVCERAVVERMVREAM---ESVELRRSAQALAQQVRRDIA 299 DQ++N+R + VWG G + A V V E + E +R A+ L V Sbjct: 393 DQRMNARSVAHVWGFGAAFEGAMTSAGVAAAVEELLRGEEGAGMRARAKELQALVAEAFG 452 Query: 298 QGGSSAKEFKRLVGFI 251 GG K F R V + Sbjct: 453 PGGECRKNFDRFVEIV 468
>CZOG1_MAIZE (Q93XP7) Cis-zeatin O-glucosyltransferase 1 (EC 2.4.1.215)| (cisZOG1) Length = 467 Score = 35.4 bits (80), Expect = 0.075 Identities = 21/82 (25%), Positives = 44/82 (53%), Gaps = 9/82 (10%) Frame = -3 Query: 469 DQQINSRFMGAVWGSGLDMK------DVCERAVVERMVREAMES---VELRRSAQALAQQ 317 DQ +S + + +GL ++ ++ +++++ EAM S + +R+ A+ L + Sbjct: 384 DQPWDSELLCKYFKAGLLVRPWEKHAEIVPAQAIQKVIEEAMLSDSGMAVRQRAKELGEA 443 Query: 316 VRRDIAQGGSSAKEFKRLVGFI 251 VR +A GG+S K+ +G+I Sbjct: 444 VRASVADGGNSRKDLDDFIGYI 465
>CZOG2_MAIZE (Q8RXA5) Cis-zeatin O-glucosyltransferase 2 (EC 2.4.1.215)| (cisZOG2) Length = 463 Score = 35.0 bits (79), Expect = 0.099 Identities = 16/56 (28%), Positives = 33/56 (58%), Gaps = 3/56 (5%) Frame = -3 Query: 409 DVCERAVVERMVREAMES---VELRRSAQALAQQVRRDIAQGGSSAKEFKRLVGFI 251 ++ +++++ EAM S + +R+ A+ L + VR +A GG+S K+ +G+I Sbjct: 406 EIIPAQAIQKVIEEAMLSDSGMAVRQRAKELGEAVRASVADGGNSRKDLDDFIGYI 461
>ZOX_PHAVU (P56725) Zeatin O-xylosyltransferase (EC 2.4.2.40) (Zeatin| O-beta-D-xylosyltransferase) Length = 454 Score = 32.3 bits (72), Expect = 0.64 Identities = 25/82 (30%), Positives = 39/82 (47%), Gaps = 9/82 (10%) Frame = -3 Query: 469 DQQINSRFMGAVWGSGLDMKDVCER------AVVERMVREAMESVE---LRRSAQALAQQ 317 DQ N+ + V GL +KD +R +V+E VR ME+ E +R+ A L + Sbjct: 371 DQPRNAVLVTDVLKVGLIVKDWEQRKSLVSASVIENAVRRLMETKEGDEIRKRAVKLKDE 430 Query: 316 VRRDIAQGGSSAKEFKRLVGFI 251 + R + +GG S E + I Sbjct: 431 IHRSMDEGGVSRMEMASFIAHI 452
>UFOG5_MANES (Q40287) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115)| (Flavonol 3-O-glucosyltransferase 5) (UDP-glucose flavonoid 3-O-glucosyltransferase 5) Length = 487 Score = 32.3 bits (72), Expect = 0.64 Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 3/55 (5%) Frame = -3 Query: 439 AVWGSGLDMKDVCERAVVERMVREAM---ESVELRRSAQALAQQVRRDIAQGGSS 284 AV L K+V +R +ERM+R M E E+R+ + L + + +GGSS Sbjct: 408 AVRPKNLPAKEVVKREEIERMIRRIMVDEEGSEIRKRVRELKDSGEKALNEGGSS 462
>ZOG_PHALU (Q9ZSK5) Zeatin O-glucosyltransferase (EC 2.4.1.203) (Trans-zeatin| O-beta-D-glucosyltransferase) Length = 459 Score = 31.6 bits (70), Expect = 1.1 Identities = 26/82 (31%), Positives = 38/82 (46%), Gaps = 9/82 (10%) Frame = -3 Query: 469 DQQINSRFMGAVWGSGLDMKDVCER------AVVERMVREAMESVE---LRRSAQALAQQ 317 DQ N+ + V GL +KD +R +VVE VR ME+ E +R+ A L Sbjct: 376 DQPRNAVLVTEVLKVGLVVKDWAQRNSLVSASVVENGVRRLMETKEGDEMRQRAVRLKNA 435 Query: 316 VRRDIAQGGSSAKEFKRLVGFI 251 + R + +GG S E + I Sbjct: 436 IHRSMDEGGVSHMEMGSFIAHI 457
>NDF1_XENLA (Q91616) Neurogenic differentiation factor 1 (NeuroD1)| Length = 352 Score = 31.6 bits (70), Expect = 1.1 Identities = 22/57 (38%), Positives = 28/57 (49%), Gaps = 4/57 (7%) Frame = +2 Query: 302 DVPSHLLRQCLSRSP*LDGLH----GLPHHPFHDGPLAHVFHVQPRAPDGAHEPTVD 460 D+ SH+ Q S S L G GLP P+ +HVFHV+P + A EP D Sbjct: 203 DIQSHM--QTASSSFPLQGYPYQSPGLPSPPYGTMDSSHVFHVKPHSYGAALEPFFD 257
>UFOG_GENTR (Q96493) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115)| (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) Length = 453 Score = 31.6 bits (70), Expect = 1.1 Identities = 19/74 (25%), Positives = 38/74 (51%), Gaps = 4/74 (5%) Frame = -3 Query: 469 DQQINSRFMGAVWGSGLDMKDVC----ERAVVERMVREAMESVELRRSAQALAQQVRRDI 302 DQ++N+R + VW G+ +K E V +V + + E+R++ L ++ + + Sbjct: 372 DQKVNARMVEDVWKIGVGVKGGVFTEDETTRVLELVLFSDKGKEMRQNVGRLKEKAKDAV 431 Query: 301 AQGGSSAKEFKRLV 260 GSS + F+ L+ Sbjct: 432 KANGSSTRNFESLL 445
>COGT2_ARATH (Q9SK82) Cytokinin-O-glucosyltransferase 2 (EC 2.4.1.-) (Zeatin| O-glucosyltransferase 2) Length = 489 Score = 31.2 bits (69), Expect = 1.4 Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 6/76 (7%) Frame = -3 Query: 469 DQQINSRFMGAVWGSGLDMKDVCERAVVERMVREAME---SVELRRSA---QALAQQVRR 308 DQQ+N +F W G+++ +R VE +VRE M+ ++R A Q LA++ Sbjct: 405 DQQMNCKFCCDEWDVGIEIGGDVKREEVEAVVRELMDGEKGKKMREKAVEWQRLAEKATE 464 Query: 307 DIAQGGSSAKEFKRLV 260 + GSS F+ +V Sbjct: 465 H--KLGSSVMNFETVV 478
>UFOG_HORVU (P14726) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115)| (Flavonol 3-O-glucosyltransferase) (UDP-glucose flavonoid 3-O-glucosyltransferase) (Bronze-1) Length = 455 Score = 31.2 bits (69), Expect = 1.4 Identities = 20/76 (26%), Positives = 29/76 (38%), Gaps = 3/76 (3%) Frame = -3 Query: 469 DQQINSRFMGAVWGSGLDMKDVCERAVVERMVREAM---ESVELRRSAQALAQQVRRDIA 299 DQ +N+R + +VWG G R V V + + +R AQ L V + Sbjct: 377 DQTMNARSVASVWGFGTAFDGPMTRGAVANAVATLLRGEDGERMRAKAQELQAMVGKAFE 436 Query: 298 QGGSSAKEFKRLVGFI 251 G K F V + Sbjct: 437 PDGGCRKNFDEFVEIV 452
>DNAK_GLUOX (Q5FSL5) Chaperone protein dnaK (Heat shock protein 70) (Heat shock| 70 kDa protein) (HSP70) Length = 634 Score = 30.8 bits (68), Expect = 1.9 Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 2/62 (3%) Frame = -3 Query: 469 DQQINSRFMGAVWGSGLD--MKDVCERAVVERMVREAMESVELRRSAQALAQQVRRDIAQ 296 +QQI + G + + +D +KD A ++ RE VELR S ++L Q + I + Sbjct: 491 EQQIKIQASGGLSDADIDRMVKDAEANASADKAKREL---VELRNSTESLIHQTEKSITE 547 Query: 295 GG 290 GG Sbjct: 548 GG 549
>FPG_PHOPR (Q6LVN0) Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23)| (Fapy-DNA glycosylase) (DNA-(apurinic or apyrimidinic site) lyase mutM) (EC 4.2.99.18) (AP lyase mutM) Length = 268 Score = 30.4 bits (67), Expect = 2.4 Identities = 22/61 (36%), Positives = 28/61 (45%), Gaps = 6/61 (9%) Frame = -3 Query: 304 IAQGGSSAKEFKRLVG----FIIELSISTRGSTPSP--DKE*GPAGIGTLLSMLLCESCQ 143 I QGG++ K+FK G F EL + +G P P D IG S + C CQ Sbjct: 209 IEQGGTTLKDFKNADGKPGYFAQELQVYGKGGKPCPRCDNPLSEMKIGQRAS-VFCSECQ 267 Query: 142 K 140 K Sbjct: 268 K 268
>COCA1_HUMAN (Q99715) Collagen alpha-1(XII) chain precursor| Length = 3063 Score = 29.3 bits (64), Expect = 5.4 Identities = 18/36 (50%), Positives = 19/36 (52%) Frame = -1 Query: 450 GSWAPSGARGWT*KTCARGPSWNGW*GRPWSPSS*G 343 G P G RG+T K A GP G GRP SP S G Sbjct: 2833 GPMGPPGDRGFTGKDSAMGP--RGPPGRPGSPGSPG 2866
>CRIM1_MOUSE (Q9JLL0) Cysteine-rich motor neuron 1 protein precursor (CRIM-1)| (Fragment) Length = 1028 Score = 28.9 bits (63), Expect = 7.1 Identities = 22/60 (36%), Positives = 26/60 (43%), Gaps = 4/60 (6%) Frame = +3 Query: 45 KHRSELSRCNVVSHGFSSNKC-HFKLALSCPSAFWQDSHSNIDNK---VPMPAGPYSLSG 212 KH ++ RC KC + CP F QDSH + K VP AGP LSG Sbjct: 547 KHGCDICRCK---------KCPELPCSKICPLGFQQDSHGCLICKCREVPPSAGPPVLSG 597
>CO5A3_HUMAN (P25940) Collagen alpha-3(V) chain precursor| Length = 1745 Score = 28.9 bits (63), Expect = 7.1 Identities = 14/32 (43%), Positives = 15/32 (46%) Frame = +2 Query: 356 GLHGLPHHPFHDGPLAHVFHVQPRAPDGAHEP 451 G G+P P DGPL H H P GA P Sbjct: 668 GNPGIPGLPGSDGPLGHPGHEGPTGEKGAQGP 699
>FPG_MANSM (Q65R59) Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23)| (Fapy-DNA glycosylase) (DNA-(apurinic or apyrimidinic site) lyase mutM) (EC 4.2.99.18) (AP lyase mutM) Length = 269 Score = 28.5 bits (62), Expect = 9.2 Identities = 22/77 (28%), Positives = 35/77 (45%), Gaps = 12/77 (15%) Frame = -3 Query: 334 QALAQQVRRDIAQGGSSAKEFKRLVG----FIIELSISTRGSTPSPDKE*GPAGIGTLLS 167 + + Q+++R I QGG++ K+F + G F EL I + P P+ GT + Sbjct: 199 EKIKQELKRAIEQGGTTLKDFLQPDGRPGYFAQELQIYGKKGAPCPN-------CGTKIE 251 Query: 166 MLL--------CESCQK 140 L+ C CQK Sbjct: 252 SLVVAQRNSYFCPKCQK 268 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 64,405,302 Number of Sequences: 219361 Number of extensions: 1232036 Number of successful extensions: 3963 Number of sequences better than 10.0: 22 Number of HSP's better than 10.0 without gapping: 3749 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3958 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3130907202 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
