ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart23d11 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_466126.1| Oryza sativa (japonica cultivar-group), mRNA Length = 984 Score = 48.1 bits (24), Expect = 0.022 Identities = 24/24 (100%) Strand = Plus / Minus Query: 349 cccggcgccggcgccggcgcaggc 372 |||||||||||||||||||||||| Sbjct: 686 cccggcgccggcgccggcgcaggc 663
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 48.1 bits (24), Expect = 0.022 Identities = 24/24 (100%) Strand = Plus / Minus Query: 349 cccggcgccggcgccggcgcaggc 372 |||||||||||||||||||||||| Sbjct: 20555433 cccggcgccggcgccggcgcaggc 20555410 Score = 44.1 bits (22), Expect = 0.34 Identities = 22/22 (100%) Strand = Plus / Plus Query: 350 ccggcgccggcgccggcgcagg 371 |||||||||||||||||||||| Sbjct: 25860223 ccggcgccggcgccggcgcagg 25860244 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 311 tggcgcccggcgcgtcggcc 330 |||||||||||||||||||| Sbjct: 24100647 tggcgcccggcgcgtcggcc 24100628
>dbj|AP005611.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0051E21 Length = 137959 Score = 48.1 bits (24), Expect = 0.022 Identities = 24/24 (100%) Strand = Plus / Minus Query: 349 cccggcgccggcgccggcgcaggc 372 |||||||||||||||||||||||| Sbjct: 50991 cccggcgccggcgccggcgcaggc 50968
>ref|XM_475473.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2043 Score = 46.1 bits (23), Expect = 0.085 Identities = 23/23 (100%) Strand = Plus / Minus Query: 350 ccggcgccggcgccggcgcaggc 372 ||||||||||||||||||||||| Sbjct: 835 ccggcgccggcgccggcgcaggc 813
>gb|AC129718.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0088I06, complete sequence Length = 187651 Score = 46.1 bits (23), Expect = 0.085 Identities = 23/23 (100%) Strand = Plus / Minus Query: 350 ccggcgccggcgccggcgcaggc 372 ||||||||||||||||||||||| Sbjct: 154923 ccggcgccggcgccggcgcaggc 154901
>gb|AY456696.1| Arthrobacter aurescens strain TC1 plasmid pAA1 atrazine catabolic region, partial sequence Length = 161264 Score = 46.1 bits (23), Expect = 0.085 Identities = 23/23 (100%) Strand = Plus / Plus Query: 250 gcgccgacgacccggcacgacca 272 ||||||||||||||||||||||| Sbjct: 158986 gcgccgacgacccggcacgacca 159008
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 46.1 bits (23), Expect = 0.085 Identities = 23/23 (100%) Strand = Plus / Minus Query: 350 ccggcgccggcgccggcgcaggc 372 ||||||||||||||||||||||| Sbjct: 24086434 ccggcgccggcgccggcgcaggc 24086412 Score = 44.1 bits (22), Expect = 0.34 Identities = 28/30 (93%) Strand = Plus / Plus Query: 350 ccggcgccggcgccggcgcaggcacgggcg 379 |||||| |||||||||||| |||||||||| Sbjct: 3655818 ccggcgacggcgccggcgcgggcacgggcg 3655847 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 350 ccggcgccggcgccggcgcag 370 ||||||||||||||||||||| Sbjct: 3656319 ccggcgccggcgccggcgcag 3656339 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 350 ccggcgccggcgccggcgcag 370 ||||||||||||||||||||| Sbjct: 1414956 ccggcgccggcgccggcgcag 1414936 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 349 cccggcgccggcgccggcgc 368 |||||||||||||||||||| Sbjct: 26652178 cccggcgccggcgccggcgc 26652159
>dbj|AK110420.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-166-A03, full insert sequence Length = 2402 Score = 46.1 bits (23), Expect = 0.085 Identities = 23/23 (100%) Strand = Plus / Minus Query: 350 ccggcgccggcgccggcgcaggc 372 ||||||||||||||||||||||| Sbjct: 932 ccggcgccggcgccggcgcaggc 910
>ref|XM_475645.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 798 Score = 44.1 bits (22), Expect = 0.34 Identities = 28/30 (93%) Strand = Plus / Minus Query: 350 ccggcgccggcgccggcgcaggcacgggcg 379 |||||| |||||||||||| |||||||||| Sbjct: 616 ccggcgacggcgccggcgcgggcacgggcg 587 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 350 ccggcgccggcgccggcgcag 370 ||||||||||||||||||||| Sbjct: 115 ccggcgccggcgccggcgcag 95
>ref|XM_467005.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1598 Score = 44.1 bits (22), Expect = 0.34 Identities = 22/22 (100%) Strand = Plus / Minus Query: 350 ccggcgccggcgccggcgcagg 371 |||||||||||||||||||||| Sbjct: 675 ccggcgccggcgccggcgcagg 654
>ref|NM_187382.1| Oryza sativa (japonica cultivar-group), mRNA Length = 408 Score = 44.1 bits (22), Expect = 0.34 Identities = 22/22 (100%) Strand = Plus / Plus Query: 351 cggcgccggcgccggcgcaggc 372 |||||||||||||||||||||| Sbjct: 20 cggcgccggcgccggcgcaggc 41
>gb|AC124144.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0099P06, complete sequence Length = 135117 Score = 44.1 bits (22), Expect = 0.34 Identities = 28/30 (93%) Strand = Plus / Plus Query: 350 ccggcgccggcgccggcgcaggcacgggcg 379 |||||| |||||||||||| |||||||||| Sbjct: 78165 ccggcgacggcgccggcgcgggcacgggcg 78194 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 350 ccggcgccggcgccggcgcag 370 ||||||||||||||||||||| Sbjct: 78666 ccggcgccggcgccggcgcag 78686
>gb|AC090433.10| Chlamydomonas reinhardtii clone cr-19b23, complete sequence Length = 118183 Score = 44.1 bits (22), Expect = 0.34 Identities = 22/22 (100%) Strand = Plus / Plus Query: 350 ccggcgccggcgccggcgcagg 371 |||||||||||||||||||||| Sbjct: 10683 ccggcgccggcgccggcgcagg 10704
>tpg|BK005053.1| TPA: TPA_exp: Oryza sativa (indica cultivar-group) WRKY transcription factor 51 (WRKY51) gene, complete cds Length = 1141 Score = 44.1 bits (22), Expect = 0.34 Identities = 22/22 (100%) Strand = Plus / Plus Query: 350 ccggcgccggcgccggcgcagg 371 |||||||||||||||||||||| Sbjct: 139 ccggcgccggcgccggcgcagg 160
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 44.1 bits (22), Expect = 0.34 Identities = 22/22 (100%) Strand = Plus / Plus Query: 347 gtcccggcgccggcgccggcgc 368 |||||||||||||||||||||| Sbjct: 3936198 gtcccggcgccggcgccggcgc 3936219 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 349 cccggcgccggcgccggcgca 369 ||||||||||||||||||||| Sbjct: 27343149 cccggcgccggcgccggcgca 27343169 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 349 cccggcgccggcgccggcgc 368 |||||||||||||||||||| Sbjct: 26090196 cccggcgccggcgccggcgc 26090215
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 44.1 bits (22), Expect = 0.34 Identities = 22/22 (100%) Strand = Plus / Minus Query: 351 cggcgccggcgccggcgcaggc 372 |||||||||||||||||||||| Sbjct: 18629284 cggcgccggcgccggcgcaggc 18629263 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 349 cccggcgccggcgccggcgca 369 ||||||||||||||||||||| Sbjct: 26342000 cccggcgccggcgccggcgca 26341980
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 44.1 bits (22), Expect = 0.34 Identities = 22/22 (100%) Strand = Plus / Plus Query: 351 cggcgccggcgccggcgcaggc 372 |||||||||||||||||||||| Sbjct: 19979076 cggcgccggcgccggcgcaggc 19979097 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 350 ccggcgccggcgccggcgcag 370 ||||||||||||||||||||| Sbjct: 6957077 ccggcgccggcgccggcgcag 6957057 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 349 cccggcgccggcgccggcgc 368 |||||||||||||||||||| Sbjct: 27192027 cccggcgccggcgccggcgc 27192046 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 349 cccggcgccggcgccggcgc 368 |||||||||||||||||||| Sbjct: 9865500 cccggcgccggcgccggcgc 9865481 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 353 gcgccggcgccggcgcaggc 372 |||||||||||||||||||| Sbjct: 6534160 gcgccggcgccggcgcaggc 6534179
>dbj|AP004361.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0062A24 Length = 148362 Score = 44.1 bits (22), Expect = 0.34 Identities = 22/22 (100%) Strand = Plus / Plus Query: 351 cggcgccggcgccggcgcaggc 372 |||||||||||||||||||||| Sbjct: 81985 cggcgccggcgccggcgcaggc 82006
>dbj|AP004006.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1197_D06 Length = 103844 Score = 44.1 bits (22), Expect = 0.34 Identities = 22/22 (100%) Strand = Plus / Minus Query: 351 cggcgccggcgccggcgcaggc 372 |||||||||||||||||||||| Sbjct: 54338 cggcgccggcgccggcgcaggc 54317
>dbj|AP004259.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0005E02 Length = 89380 Score = 44.1 bits (22), Expect = 0.34 Identities = 22/22 (100%) Strand = Plus / Minus Query: 351 cggcgccggcgccggcgcaggc 372 |||||||||||||||||||||| Sbjct: 81826 cggcgccggcgccggcgcaggc 81805
>dbj|AP005291.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1282_H11 Length = 143314 Score = 44.1 bits (22), Expect = 0.34 Identities = 22/22 (100%) Strand = Plus / Plus Query: 350 ccggcgccggcgccggcgcagg 371 |||||||||||||||||||||| Sbjct: 11564 ccggcgccggcgccggcgcagg 11585
>dbj|AK106784.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-115-H10, full insert sequence Length = 1598 Score = 44.1 bits (22), Expect = 0.34 Identities = 22/22 (100%) Strand = Plus / Minus Query: 350 ccggcgccggcgccggcgcagg 371 |||||||||||||||||||||| Sbjct: 675 ccggcgccggcgccggcgcagg 654
>dbj|AK105598.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-200-A03, full insert sequence Length = 1114 Score = 44.1 bits (22), Expect = 0.34 Identities = 28/30 (93%) Strand = Plus / Minus Query: 350 ccggcgccggcgccggcgcaggcacgggcg 379 |||||| |||||||||||| |||||||||| Sbjct: 679 ccggcgacggcgccggcgcgggcacgggcg 650 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 350 ccggcgccggcgccggcgcag 370 ||||||||||||||||||||| Sbjct: 178 ccggcgccggcgccggcgcag 158
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 44.1 bits (22), Expect = 0.34 Identities = 22/22 (100%) Strand = Plus / Plus Query: 347 gtcccggcgccggcgccggcgc 368 |||||||||||||||||||||| Sbjct: 3936172 gtcccggcgccggcgccggcgc 3936193 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 349 cccggcgccggcgccggcgca 369 ||||||||||||||||||||| Sbjct: 27268749 cccggcgccggcgccggcgca 27268769 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 349 cccggcgccggcgccggcgc 368 |||||||||||||||||||| Sbjct: 26018372 cccggcgccggcgccggcgc 26018391
>emb|AL732376.2|CNS08C8Z Oryza sativa chromosome 12, . BAC OSJNBa0086B10 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 152090 Score = 44.1 bits (22), Expect = 0.34 Identities = 22/22 (100%) Strand = Plus / Plus Query: 347 gtcccggcgccggcgccggcgc 368 |||||||||||||||||||||| Sbjct: 98174 gtcccggcgccggcgccggcgc 98195
>gb|DQ248961.1| Streptomyces davawensis putative RNA polymerase ECF-subfamily sigma factor, putative chitinase precursor, putative riboflavin synthase, putative integral membrane protein, putative dihydroxybutanonphosphate synthase/GTP-cyclohydrolase II, putative 6,7-dimethyl-8-ribityllumazine synthase, and putative phosphoribosyl-ATP-pyrophosphatase genes, complete cds Length = 7320 Score = 44.1 bits (22), Expect = 0.34 Identities = 22/22 (100%) Strand = Plus / Minus Query: 307 tcgctggcgcccggcgcgtcgg 328 |||||||||||||||||||||| Sbjct: 1368 tcgctggcgcccggcgcgtcgg 1347
>ref|NM_188558.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1236 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 350 ccggcgccggcgccggcgcag 370 ||||||||||||||||||||| Sbjct: 575 ccggcgccggcgccggcgcag 595
>ref|NM_193139.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1599 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 349 cccggcgccggcgccggcgca 369 ||||||||||||||||||||| Sbjct: 1128 cccggcgccggcgccggcgca 1108
>gb|AC120527.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0011J22 map R10571S, complete sequence Length = 154441 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 351 cggcgccggcgccggcgcagg 371 ||||||||||||||||||||| Sbjct: 26565 cggcgccggcgccggcgcagg 26545
>gb|AC147812.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0073K23 map near R10571S, complete sequence Length = 161073 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 351 cggcgccggcgccggcgcagg 371 ||||||||||||||||||||| Sbjct: 125866 cggcgccggcgccggcgcagg 125846
>gb|AC134931.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0079L11, complete sequence Length = 124104 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 350 ccggcgccggcgccggcgcag 370 ||||||||||||||||||||| Sbjct: 76618 ccggcgccggcgccggcgcag 76598
>gb|AC016588.9| Homo sapiens chromosome 19 clone CTD-3113P16, complete sequence Length = 144578 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 353 gcgccggcgccggcgcaggca 373 ||||||||||||||||||||| Sbjct: 14459 gcgccggcgccggcgcaggca 14479
>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome Length = 4940217 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 347 gtcccggcgccggcgccggcgcagg 371 |||||||||||||| |||||||||| Sbjct: 909523 gtcccggcgccggccccggcgcagg 909547 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 350 ccggcgccggcgccggcgca 369 |||||||||||||||||||| Sbjct: 3462470 ccggcgccggcgccggcgca 3462489
>ref|NM_167671.1| Drosophila melanogaster CG14208-RA, transcript variant A (Tyler), mRNA Length = 3050 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 373 acgggcgccatctccggagcg 393 ||||||||||||||||||||| Sbjct: 1174 acgggcgccatctccggagcg 1194
>ref|NM_134483.2| Drosophila melanogaster CG14208-RB, transcript variant B (Tyler), mRNA Length = 2961 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 373 acgggcgccatctccggagcg 393 ||||||||||||||||||||| Sbjct: 1174 acgggcgccatctccggagcg 1194
>ref|NM_001031902.1| Drosophila melanogaster CG14209-RB, transcript variant B (Shawn), mRNA Length = 2961 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 373 acgggcgccatctccggagcg 393 ||||||||||||||||||||| Sbjct: 1174 acgggcgccatctccggagcg 1194
>ref|NM_001031901.1| Drosophila melanogaster CG14209-RC, transcript variant C (Shawn), mRNA Length = 3050 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 373 acgggcgccatctccggagcg 393 ||||||||||||||||||||| Sbjct: 1174 acgggcgccatctccggagcg 1194
>gb|AY070516.1| Drosophila melanogaster GH21048 full length cDNA Length = 3070 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 373 acgggcgccatctccggagcg 393 ||||||||||||||||||||| Sbjct: 1140 acgggcgccatctccggagcg 1160
>dbj|AB066561.1| Oryza sativa ossap2 mRNA for secretory acid phosphatase precursor, complete cds Length = 1836 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 349 cccggcgccggcgccggcgca 369 ||||||||||||||||||||| Sbjct: 117 cccggcgccggcgccggcgca 97
>gb|AY257863.1| Oryza sativa (japonica cultivar-group) chromosome 11 genomic sequence Length = 42748 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 351 cggcgccggcgccggcgcagg 371 ||||||||||||||||||||| Sbjct: 42638 cggcgccggcgccggcgcagg 42658
>gb|AC010671.8|AC010671 Drosophila melanogaster, chromosome X, region 18E-18F, BAC clone BACR33M08, complete sequence Length = 180263 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 373 acgggcgccatctccggagcg 393 ||||||||||||||||||||| Sbjct: 9858 acgggcgccatctccggagcg 9878
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 351 cggcgccggcgccggcgcagg 371 ||||||||||||||||||||| Sbjct: 3288420 cggcgccggcgccggcgcagg 3288440 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 351 cggcgccggcgccggcgcag 370 |||||||||||||||||||| Sbjct: 4895001 cggcgccggcgccggcgcag 4895020
>gb|AC010847.11|AC010847 Drosophila melanogaster, chromosome X, region 18D-18D, BAC clone BACR10M08, complete sequence Length = 180213 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 373 acgggcgccatctccggagcg 393 ||||||||||||||||||||| Sbjct: 154005 acgggcgccatctccggagcg 154025
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 348 tcccggcgccggcgccggcgc 368 ||||||||||||||||||||| Sbjct: 2545752 tcccggcgccggcgccggcgc 2545732 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 349 cccggcgccggcgccggcgc 368 |||||||||||||||||||| Sbjct: 2986238 cccggcgccggcgccggcgc 2986257
>dbj|AP002902.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0492F05 Length = 159242 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 350 ccggcgccggcgccggcgcag 370 ||||||||||||||||||||| Sbjct: 124801 ccggcgccggcgccggcgcag 124781
>dbj|AP002900.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0443E07 Length = 159440 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 350 ccggcgccggcgccggcgcag 370 ||||||||||||||||||||| Sbjct: 78895 ccggcgccggcgccggcgcag 78875
>dbj|AP003752.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1332_C12 Length = 67349 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 349 cccggcgccggcgccggcgca 369 ||||||||||||||||||||| Sbjct: 61578 cccggcgccggcgccggcgca 61558
>emb|X76603.1|HVB23D H.vulgare (cv. Bomi) B23D mRNA for oleosin Length = 460 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 350 ccggcgccggcgccggcgcaggcac 374 ||||||||||||||||||| ||||| Sbjct: 134 ccggcgccggcgccggcgccggcac 158
>emb|X82677.1|HVOLE1 H.vulgare Ole-1 mRNA for oleosin Length = 899 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 350 ccggcgccggcgccggcgcaggcac 374 ||||||||||||||||||| ||||| Sbjct: 573 ccggcgccggcgccggcgccggcac 597
>dbj|AK102952.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033115D18, full insert sequence Length = 1707 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 350 ccggcgccggcgccggcgcag 370 ||||||||||||||||||||| Sbjct: 66 ccggcgccggcgccggcgcag 46
>dbj|AK066273.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013061L15, full insert sequence Length = 1853 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 349 cccggcgccggcgccggcgca 369 ||||||||||||||||||||| Sbjct: 135 cccggcgccggcgccggcgca 115
>dbj|AK058368.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-G03, full insert sequence Length = 1475 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 349 cccggcgccggcgccggcgca 369 ||||||||||||||||||||| Sbjct: 134 cccggcgccggcgccggcgca 114
>gb|AY108020.1| Zea mays PCO086613 mRNA sequence Length = 518 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 349 cccggcgccggcgccggcgca 369 ||||||||||||||||||||| Sbjct: 262 cccggcgccggcgccggcgca 242
>gb|AY107970.1| Zea mays PCO085337 mRNA sequence Length = 729 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 350 ccggcgccggcgccggcgcag 370 ||||||||||||||||||||| Sbjct: 238 ccggcgccggcgccggcgcag 218
>gb|AE003512.3| Drosophila melanogaster chromosome X, section 64 of 74 of the complete sequence Length = 346474 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 373 acgggcgccatctccggagcg 393 ||||||||||||||||||||| Sbjct: 259771 acgggcgccatctccggagcg 259791
>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome Length = 4941439 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 347 gtcccggcgccggcgccggcgcagg 371 |||||||||||||| |||||||||| Sbjct: 939715 gtcccggcgccggccccggcgcagg 939739 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 350 ccggcgccggcgccggcgca 369 |||||||||||||||||||| Sbjct: 3458203 ccggcgccggcgccggcgca 3458222
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 351 cggcgccggcgccggcgcagg 371 ||||||||||||||||||||| Sbjct: 3297133 cggcgccggcgccggcgcagg 3297153 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 351 cggcgccggcgccggcgcag 370 |||||||||||||||||||| Sbjct: 4913785 cggcgccggcgccggcgcag 4913804
>emb|AL731762.2|CNS07YPW Oryza sativa chromosome 12, . BAC OJ1119_E02 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 124605 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 349 cccggcgccggcgccggcgca 369 ||||||||||||||||||||| Sbjct: 11469 cccggcgccggcgccggcgca 11489
>gb|AC129720.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0683F12, complete sequence Length = 144455 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 350 ccggcgccggcgccggcgcag 370 ||||||||||||||||||||| Sbjct: 9036 ccggcgccggcgccggcgcag 9016
>gb|AC104713.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1362_G11, complete sequence Length = 115808 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 349 cccggcgccggcgccggcgc 368 |||||||||||||||||||| Sbjct: 33175 cccggcgccggcgccggcgc 33156
>ref|NM_188119.1| Oryza sativa (japonica cultivar-group), Ozsa8551 predicted mRNA Length = 2388 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 349 cccggcgccggcgccggcgc 368 |||||||||||||||||||| Sbjct: 2301 cccggcgccggcgccggcgc 2282
>ref|NM_188486.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 573 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 353 gcgccggcgccggcgcaggc 372 |||||||||||||||||||| Sbjct: 377 gcgccggcgccggcgcaggc 396
>ref|XM_482476.1| Oryza sativa (japonica cultivar-group), mRNA Length = 954 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 350 ccggcgccggcgccggcgca 369 |||||||||||||||||||| Sbjct: 217 ccggcgccggcgccggcgca 198
>ref|XM_475807.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1131 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 349 cccggcgccggcgccggcgc 368 |||||||||||||||||||| Sbjct: 723 cccggcgccggcgccggcgc 742
>ref|XM_470590.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2124 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 350 ccggcgccggcgccggcgcaggca 373 ||||||||||||||||||| |||| Sbjct: 260 ccggcgccggcgccggcgccggca 237
>ref|XM_466682.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1671 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 311 tggcgcccggcgcgtcggcc 330 |||||||||||||||||||| Sbjct: 426 tggcgcccggcgcgtcggcc 407
>ref|XM_506864.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1004_A05.15 mRNA Length = 1716 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 311 tggcgcccggcgcgtcggcc 330 |||||||||||||||||||| Sbjct: 426 tggcgcccggcgcgtcggcc 407
>ref|XM_479651.1| Oryza sativa (japonica cultivar-group), mRNA Length = 714 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 349 cccggcgccggcgccggcgc 368 |||||||||||||||||||| Sbjct: 93 cccggcgccggcgccggcgc 112
>ref|NM_191908.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1698 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 349 cccggcgccggcgccggcgc 368 |||||||||||||||||||| Sbjct: 873 cccggcgccggcgccggcgc 854
>gb|AC139170.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0058P12, complete sequence Length = 173073 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 351 cggcgccggcgccggcgcag 370 |||||||||||||||||||| Sbjct: 99892 cggcgccggcgccggcgcag 99873
>gb|AC120506.5| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0006O08 map S15179S, complete sequence Length = 166005 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 349 cccggcgccggcgccggcgc 368 |||||||||||||||||||| Sbjct: 42254 cccggcgccggcgccggcgc 42235
>ref|XM_323029.1| Neurospora crassa OR74A hypothetical protein ( (AL513467) conserved hypothetical protein [Neurospora crassa OR74A] ) (NCU03728.1) partial mRNA Length = 2235 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 350 ccggcgccggcgccggcgca 369 |||||||||||||||||||| Sbjct: 2080 ccggcgccggcgccggcgca 2061
>ref|XM_956411.1| Neurospora crassa OR74A hypothetical protein ( (AL513467) conserved hypothetical protein [Neurospora crassa OR74A] ) (NCU03728.1) partial mRNA Length = 2235 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 350 ccggcgccggcgccggcgca 369 |||||||||||||||||||| Sbjct: 2080 ccggcgccggcgccggcgca 2061
>gb|AC127339.3| Mus musculus BAC clone RP23-180G16 from chromosome 5, complete sequence Length = 225376 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 160 gttcgtgccaatgcatgtac 179 |||||||||||||||||||| Sbjct: 99306 gttcgtgccaatgcatgtac 99325
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 349 cccggcgccggcgccggcgc 368 |||||||||||||||||||| Sbjct: 35644476 cccggcgccggcgccggcgc 35644457 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 349 cccggcgccggcgccggcgc 368 |||||||||||||||||||| Sbjct: 15139025 cccggcgccggcgccggcgc 15139044 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 349 cccggcgccggcgccggcgc 368 |||||||||||||||||||| Sbjct: 9606478 cccggcgccggcgccggcgc 9606459 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 350 ccggcgccggcgccggcgcaggca 373 ||||||||||||||||||| |||| Sbjct: 5609833 ccggcgccggcgccggcgccggca 5609810
>gb|AC084287.9| Mus Musculus S train C57BL6/J chromosome 1 BAC, RP23-145H3 Complete Sequence, complete sequence Length = 201429 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 349 cccggcgccggcgccggcgc 368 |||||||||||||||||||| Sbjct: 71239 cccggcgccggcgccggcgc 71258
>gb|AC126050.3| Mus musculus BAC clone RP23-236L17 from 1, complete sequence Length = 143097 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 349 cccggcgccggcgccggcgc 368 |||||||||||||||||||| Sbjct: 93608 cccggcgccggcgccggcgc 93589
>gb|AC113597.12| Mus musculus chromosome 1, clone RP23-375F6, complete sequence Length = 224996 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 349 cccggcgccggcgccggcgc 368 |||||||||||||||||||| Sbjct: 21679 cccggcgccggcgccggcgc 21660
>gb|AY341855.1| Oryza sativa (japonica cultivar-group) WRKY14 mRNA, complete cds Length = 1947 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 349 cccggcgccggcgccggcgc 368 |||||||||||||||||||| Sbjct: 960 cccggcgccggcgccggcgc 941
>gb|AY341844.1| Oryza sativa (japonica cultivar-group) WRKY3 mRNA, complete cds Length = 1858 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 349 cccggcgccggcgccggcgc 368 |||||||||||||||||||| Sbjct: 916 cccggcgccggcgccggcgc 897
>gb|AC084405.6| Oryza sativa chromosome 3 BAC OSJNBa0044H10 genomic sequence, complete sequence Length = 165113 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 349 cccggcgccggcgccggcgc 368 |||||||||||||||||||| Sbjct: 27377 cccggcgccggcgccggcgc 27358
>emb|AL606650.5|OSJN00097 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0015D13, complete sequence Length = 127135 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 351 cggcgccggcgccggcgcag 370 |||||||||||||||||||| Sbjct: 67365 cggcgccggcgccggcgcag 67346
>emb|BX901922.9| Zebrafish DNA sequence from clone DKEY-33C12 in linkage group 13, complete sequence Length = 242350 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 78 gtttacattatgttgtacac 97 |||||||||||||||||||| Sbjct: 33669 gtttacattatgttgtacac 33688
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 304 cgctcgctggcgcccggcgc 323 |||||||||||||||||||| Sbjct: 585086 cgctcgctggcgcccggcgc 585105
>gb|AC091776.19| Chlamydomonas reinhardtii clone cr-4i21, complete sequence Length = 48498 Score = 40.1 bits (20), Expect = 5.3 Identities = 29/32 (90%) Strand = Plus / Plus Query: 350 ccggcgccggcgccggcgcaggcacgggcgcc 381 ||||||||||||| ||||| ||||| |||||| Sbjct: 35834 ccggcgccggcgcgggcgcgggcaccggcgcc 35865
>gb|AC090435.28| Chlamydomonas reinhardtii clone cr-32m22, complete sequence Length = 79677 Score = 40.1 bits (20), Expect = 5.3 Identities = 29/32 (90%) Strand = Plus / Plus Query: 350 ccggcgccggcgccggcgcaggcacgggcgcc 381 ||||||||||||| ||||| ||||| |||||| Sbjct: 14547 ccggcgccggcgcgggcgcgggcaccggcgcc 14578
>tpg|BK005019.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) WRKY transcription factor 16 (WRKY16) gene, complete cds Length = 4090 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 349 cccggcgccggcgccggcgc 368 |||||||||||||||||||| Sbjct: 2135 cccggcgccggcgccggcgc 2116
>gb|AC091733.3| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0048F08, from chromosome 3, complete sequence Length = 155790 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 349 cccggcgccggcgccggcgc 368 |||||||||||||||||||| Sbjct: 15748 cccggcgccggcgccggcgc 15729
>emb|BX248091.12| Zebrafish DNA sequence from clone DKEY-257I9, complete sequence Length = 165075 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 109 aataaacgaatttggtaacacttt 132 ||||||| |||||||||||||||| Sbjct: 127546 aataaactaatttggtaacacttt 127569
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 351 cggcgccggcgccggcgcag 370 |||||||||||||||||||| Sbjct: 32171676 cggcgccggcgccggcgcag 32171657
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 350 ccggcgccggcgccggcgca 369 |||||||||||||||||||| Sbjct: 20416713 ccggcgccggcgccggcgca 20416694 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 349 cccggcgccggcgccggcgc 368 |||||||||||||||||||| Sbjct: 102192 cccggcgccggcgccggcgc 102211
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 350 ccggcgccggcgccggcgca 369 |||||||||||||||||||| Sbjct: 4298267 ccggcgccggcgccggcgca 4298286
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 349 cccggcgccggcgccggcgc 368 |||||||||||||||||||| Sbjct: 35734549 cccggcgccggcgccggcgc 35734530 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 349 cccggcgccggcgccggcgc 368 |||||||||||||||||||| Sbjct: 15133559 cccggcgccggcgccggcgc 15133578 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 349 cccggcgccggcgccggcgc 368 |||||||||||||||||||| Sbjct: 9604599 cccggcgccggcgccggcgc 9604580 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 350 ccggcgccggcgccggcgcaggca 373 ||||||||||||||||||| |||| Sbjct: 5609046 ccggcgccggcgccggcgccggca 5609023
>gb|AC008753.9| Homo sapiens chromosome 19 clone CTD-3022G6, complete sequence Length = 147330 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 81 tacattatgttgtacaccat 100 |||||||||||||||||||| Sbjct: 119720 tacattatgttgtacaccat 119739
>gb|AC137069.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0009C19, from chromosome 3, complete sequence Length = 131709 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 349 cccggcgccggcgccggcgc 368 |||||||||||||||||||| Sbjct: 6208 cccggcgccggcgccggcgc 6227
>dbj|AP002745.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0489G09 Length = 148707 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 353 gcgccggcgccggcgcaggc 372 |||||||||||||||||||| Sbjct: 101640 gcgccggcgccggcgcaggc 101659
>dbj|AP002094.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0483F08 Length = 148985 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 353 gcgccggcgccggcgcaggc 372 |||||||||||||||||||| Sbjct: 14331 gcgccggcgccggcgcaggc 14350
>dbj|AP001072.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0025D05 Length = 145684 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 349 cccggcgccggcgccggcgc 368 |||||||||||||||||||| Sbjct: 129750 cccggcgccggcgccggcgc 129731
>dbj|AP000815.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0003H10 Length = 142418 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 349 cccggcgccggcgccggcgc 368 |||||||||||||||||||| Sbjct: 1266 cccggcgccggcgccggcgc 1247
>gb|AC105928.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0014O06, complete sequence Length = 168031 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 350 ccggcgccggcgccggcgcaggca 373 ||||||||||||||||||| |||| Sbjct: 73532 ccggcgccggcgccggcgccggca 73509
>dbj|AP005919.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0554A06 Length = 165311 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 350 ccggcgccggcgccggcgca 369 |||||||||||||||||||| Sbjct: 143488 ccggcgccggcgccggcgca 143507
>dbj|AP003222.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0003E08 Length = 135014 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 349 cccggcgccggcgccggcgc 368 |||||||||||||||||||| Sbjct: 99705 cccggcgccggcgccggcgc 99724
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 352 ggcgccggcgccggcgcagg 371 |||||||||||||||||||| Sbjct: 8859988 ggcgccggcgccggcgcagg 8859969
>dbj|AP004654.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0015C07 Length = 149079 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 349 cccggcgccggcgccggcgc 368 |||||||||||||||||||| Sbjct: 17527 cccggcgccggcgccggcgc 17546
>emb|BX001022.9| Zebrafish DNA sequence from clone CH211-243O19, complete sequence Length = 160804 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 78 gtttacattatgttgtacac 97 |||||||||||||||||||| Sbjct: 111492 gtttacattatgttgtacac 111511
>gb|AE005072.1| Halobacterium sp. NRC-1 section 103 of 170 of the complete genome Length = 12639 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 317 ccggcgcgtcggccatcgcc 336 |||||||||||||||||||| Sbjct: 10172 ccggcgcgtcggccatcgcc 10191
>dbj|AP005286.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1004_A05 Length = 174290 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 311 tggcgcccggcgcgtcggcc 330 |||||||||||||||||||| Sbjct: 59388 tggcgcccggcgcgtcggcc 59369
>dbj|AP005406.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:B1147B12 Length = 127902 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 349 cccggcgccggcgccggcgc 368 |||||||||||||||||||| Sbjct: 102192 cccggcgccggcgccggcgc 102211
>dbj|AP004463.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0456B03 Length = 152973 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 350 ccggcgccggcgccggcgca 369 |||||||||||||||||||| Sbjct: 47343 ccggcgccggcgccggcgca 47324
>dbj|AK111013.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-174-F12, full insert sequence Length = 490 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 349 cccggcgccggcgccggcgc 368 |||||||||||||||||||| Sbjct: 448 cccggcgccggcgccggcgc 429
>dbj|AK109116.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-155-C07, full insert sequence Length = 1183 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 350 ccggcgccggcgccggcgca 369 |||||||||||||||||||| Sbjct: 743 ccggcgccggcgccggcgca 762
>dbj|AK108106.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-139-B07, full insert sequence Length = 1252 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 357 cggcgccggcgcaggcacgg 376 |||||||||||||||||||| Sbjct: 699 cggcgccggcgcaggcacgg 718
>dbj|AK106948.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-119-E01, full insert sequence Length = 1774 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 349 cccggcgccggcgccggcgc 368 |||||||||||||||||||| Sbjct: 495 cccggcgccggcgccggcgc 476
>dbj|AK106290.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-101-B02, full insert sequence Length = 1760 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 349 cccggcgccggcgccggcgc 368 |||||||||||||||||||| Sbjct: 1420 cccggcgccggcgccggcgc 1439
>dbj|AK104319.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-025-E04, full insert sequence Length = 1671 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 311 tggcgcccggcgcgtcggcc 330 |||||||||||||||||||| Sbjct: 426 tggcgcccggcgcgtcggcc 407
>dbj|AK100137.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023010L23, full insert sequence Length = 2989 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 349 cccggcgccggcgccggcgc 368 |||||||||||||||||||| Sbjct: 1689 cccggcgccggcgccggcgc 1670
>dbj|AK099569.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013034N11, full insert sequence Length = 954 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 350 ccggcgccggcgccggcgca 369 |||||||||||||||||||| Sbjct: 217 ccggcgccggcgccggcgca 198
>dbj|AK073193.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033023K13, full insert sequence Length = 1219 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 353 gcgccggcgccggcgcaggc 372 |||||||||||||||||||| Sbjct: 550 gcgccggcgccggcgcaggc 569
>dbj|AK072284.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023018F03, full insert sequence Length = 1388 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 349 cccggcgccggcgccggcgc 368 |||||||||||||||||||| Sbjct: 813 cccggcgccggcgccggcgc 832
>gb|AF466646.1| Zea mays putative transposase (Z195D10.1) gene, partial cds; glycyl-tRNA synthetase (Z195D10.2), ornithine carbamoyltransferase (Z195D10.3), putative gag protein (Z195D10.5), putative SET-domain transcriptional regulator (Z195D10.7), putative oxysterol-binding protein (Z195D10.8), putative polyprotein (Z195D10.9), putative oxysterol-binding protein (Z195D10.10), putative gag-pol polyprotein (Z195D10.11), putative phosphatidylinositol-4-phosphate-5-kinase (Z195D10.12), hypothetical protein (Z195D10.15), putative gag-pol polyprotein (Z195D10.16), putative polyprotein (Z195D10.17), putative retrotransposon protein (Z195D10.18), and prpol (Z195D10.19) genes, complete cds; and putative teosinte branched2 (Z195D10.20) gene, partial cds Length = 141939 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 349 cccggcgccggcgccggcgc 368 |||||||||||||||||||| Sbjct: 115871 cccggcgccggcgccggcgc 115852
>dbj|AK060705.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-030-G09, full insert sequence Length = 1714 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 311 tggcgcccggcgcgtcggcc 330 |||||||||||||||||||| Sbjct: 424 tggcgcccggcgcgtcggcc 405
>dbj|AK060489.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-015-C07, full insert sequence Length = 1350 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 349 cccggcgccggcgccggcgc 368 |||||||||||||||||||| Sbjct: 792 cccggcgccggcgccggcgc 811
>emb|AL732336.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0105C05, complete sequence Length = 62215 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 351 cggcgccggcgccggcgcag 370 |||||||||||||||||||| Sbjct: 22930 cggcgccggcgccggcgcag 22911
>gb|DQ065771.1| Polyangium cellulosum hypothetical protein gene, complete cds; chivosazol biosynthetic gene cluster, complete sequence; and hypothetical protein gene, complete cds Length = 96547 Score = 40.1 bits (20), Expect = 5.3 Identities = 29/32 (90%) Strand = Plus / Minus Query: 350 ccggcgccggcgccggcgcaggcacgggcgcc 381 ||||||||||||||||||| ||| | |||||| Sbjct: 22484 ccggcgccggcgccggcgccggcgccggcgcc 22453
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 313 gcgcccggcgcgtcggccatcgcc 336 ||||||||||||||||||| |||| Sbjct: 318108 gcgcccggcgcgtcggccagcgcc 318085
>emb|AL513467.1|NC17E5 Neurospora crassa DNA linkage group V Cosmid contig 17E5 Length = 130049 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 350 ccggcgccggcgccggcgca 369 |||||||||||||||||||| Sbjct: 50021 ccggcgccggcgccggcgca 50002
>emb|AL713940.4|CNS07YPM Oryza sativa chromosome 12, . BAC OJ1327_A12 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 161806 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 349 cccggcgccggcgccggcgc 368 |||||||||||||||||||| Sbjct: 21475 cccggcgccggcgccggcgc 21456
>gb|AY870604.1| Oryza sativa (japonica cultivar-group) WRKY16 mRNA, complete cds Length = 1840 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 349 cccggcgccggcgccggcgc 368 |||||||||||||||||||| Sbjct: 940 cccggcgccggcgccggcgc 921 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,505,740 Number of Sequences: 3902068 Number of extensions: 2505740 Number of successful extensions: 72969 Number of sequences better than 10.0: 128 Number of HSP's better than 10.0 without gapping: 141 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 69214 Number of HSP's gapped (non-prelim): 3746 length of query: 393 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 371 effective length of database: 17,147,199,772 effective search space: 6361611115412 effective search space used: 6361611115412 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
