Clone Name | rbart23d08 |
---|---|
Clone Library Name | barley_pub |
>dbj|AB009308.2| Hordeum vulgare HvPIP1;3 mRNA, complete cds Length = 1285 Score = 462 bits (233), Expect = e-127 Identities = 247/249 (99%), Gaps = 2/249 (0%) Strand = Plus / Minus Query: 27 aattcgatcgtcgtcccttctt-aataataatttacatacatatgcacgctggattaaat 85 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 1285 aattcgatcgtcgtcccttctttaataataatttacatacatatgcacgctggattaaat 1226 Query: 86 ggcgtgcgtggtactggtacaatgcaaaaggtagggaaagtagtacagcaggtactatac 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1225 ggcgtgcgtggtactggtacaatgcaaaaggtagggaaagtagtacagcaggtactatac 1166 Query: 146 tgactgaaactcgcagacttgaacaggcgacgctgccggcaggcacacacaccgaggaga 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1165 tgactgaaactcgcagacttgaacaggcgacgctgccggcaggcacacacaccgaggaga 1106 Query: 206 gacggcagatttgagaactattacagcgtgcgcggccgagacacgatccacg-tacgcgc 264 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 1105 gacggcagatttgagaactattacagcgtgcgcggccgagacacgatccacgttacgcgc 1046 Query: 265 gcaccagca 273 ||||||||| Sbjct: 1045 gcaccagca 1037 Score = 287 bits (145), Expect = 1e-74 Identities = 145/145 (100%) Strand = Plus / Minus Query: 291 atgatcggtcgacgatgaacagcgataagattccatccatggccgcccagactgattggt 350 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1019 atgatcggtcgacgatgaacagcgataagattccatccatggccgcccagactgattggt 960 Query: 351 ccactagccgcggctcttgaaggggatcgccctgatcaccaccacgtggtagatcgccgc 410 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 959 ccactagccgcggctcttgaaggggatcgccctgatcaccaccacgtggtagatcgccgc 900 Query: 411 cagcgccgcgccgatgaacggtccc 435 ||||||||||||||||||||||||| Sbjct: 899 cagcgccgcgccgatgaacggtccc 875
>gb|AF366564.1| Triticum aestivum aquaporin PIP1 (Pip1) mRNA, complete cds Length = 1248 Score = 159 bits (80), Expect = 9e-36 Identities = 130/145 (89%), Gaps = 5/145 (3%) Strand = Plus / Minus Query: 291 atgatcggtcgacgatgaacagcgataagattcca----tccatggccgcccagactgat 346 ||||||| ||||||||||||||||||||||||||| ||||||| || | |||||||| Sbjct: 1007 atgatcgatcgacgatgaacagcgataagattccacccgtccatggtcggc-agactgat 949 Query: 347 tggtccactagccgcggctcttgaaggggatcgccctgatcaccaccacgtggtagatcg 406 ||| ||||| ||||||||||||||||||| |||||||||||||||||||||||||| | Sbjct: 948 tggctgactagtcgcggctcttgaaggggatggccctgatcaccaccacgtggtagatgg 889 Query: 407 ccgccagcgccgcgccgatgaacgg 431 ||||||||||||| ||||||||||| Sbjct: 888 ccgccagcgccgcaccgatgaacgg 864 Score = 71.9 bits (36), Expect = 2e-09 Identities = 64/72 (88%), Gaps = 1/72 (1%) Strand = Plus / Minus Query: 23 aattaattcgatcgtcgtcccttcttaat-aataatttacatacatatgcacgctggatt 81 |||||| ||||||| ||| |||||||||| ||||||||||||||||||||||||| || Sbjct: 1248 aattaactcgatcgacgttccttcttaattaataatttacatacatatgcacgctccgtt 1189 Query: 82 aaatggcgtgcg 93 |||| ||||||| Sbjct: 1188 aaatcgcgtgcg 1177 Score = 58.0 bits (29), Expect = 2e-05 Identities = 32/33 (96%) Strand = Plus / Minus Query: 174 gacgctgccggcaggcacacacaccgaggagag 206 ||||||| ||||||||||||||||||||||||| Sbjct: 1111 gacgctgtcggcaggcacacacaccgaggagag 1079 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 153 aactcgcagacttgaacagg 172 |||||||||||||||||||| Sbjct: 1142 aactcgcagacttgaacagg 1123
>ref|XM_468463.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1319 Score = 101 bits (51), Expect = 2e-18 Identities = 66/71 (92%) Strand = Plus / Minus Query: 361 cggctcttgaaggggatcgccctgatcaccaccacgtggtagatcgccgccagcgccgcg 420 ||||||||||||||||| || ||||||||||||||||||||||| |||||||| ||||| Sbjct: 1012 cggctcttgaaggggattgctctgatcaccaccacgtggtagatggccgccagtgccgct 953 Query: 421 ccgatgaacgg 431 ||||||||||| Sbjct: 952 ccgatgaacgg 942
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 101 bits (51), Expect = 2e-18 Identities = 66/71 (92%) Strand = Plus / Minus Query: 361 cggctcttgaaggggatcgccctgatcaccaccacgtggtagatcgccgccagcgccgcg 420 ||||||||||||||||| || ||||||||||||||||||||||| |||||||| ||||| Sbjct: 35369407 cggctcttgaaggggattgctctgatcaccaccacgtggtagatggccgccagtgccgct 35369348 Query: 421 ccgatgaacgg 431 ||||||||||| Sbjct: 35369347 ccgatgaacgg 35369337 Score = 48.1 bits (24), Expect = 0.024 Identities = 51/60 (85%) Strand = Plus / Minus Query: 363 gctcttgaaggggatcgccctgatcaccaccacgtggtagatcgccgccagcgccgcgcc 422 ||||||||| |||||||||||||| | |||| ||||||||| || ||||| || ||||| Sbjct: 27065642 gctcttgaatgggatcgccctgatgatcacctggtggtagatggcagccagggcagcgcc 27065583
>dbj|AP004026.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1136_C04 Length = 103194 Score = 101 bits (51), Expect = 2e-18 Identities = 66/71 (92%) Strand = Plus / Minus Query: 361 cggctcttgaaggggatcgccctgatcaccaccacgtggtagatcgccgccagcgccgcg 420 ||||||||||||||||| || ||||||||||||||||||||||| |||||||| ||||| Sbjct: 29955 cggctcttgaaggggattgctctgatcaccaccacgtggtagatggccgccagtgccgct 29896 Query: 421 ccgatgaacgg 431 ||||||||||| Sbjct: 29895 ccgatgaacgg 29885
>dbj|AK102174.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033086K14, full insert sequence Length = 1318 Score = 101 bits (51), Expect = 2e-18 Identities = 66/71 (92%) Strand = Plus / Minus Query: 361 cggctcttgaaggggatcgccctgatcaccaccacgtggtagatcgccgccagcgccgcg 420 ||||||||||||||||| || ||||||||||||||||||||||| |||||||| ||||| Sbjct: 1011 cggctcttgaaggggattgctctgatcaccaccacgtggtagatggccgccagtgccgct 952 Query: 421 ccgatgaacgg 431 ||||||||||| Sbjct: 951 ccgatgaacgg 941
>dbj|AB029325.1| Oryza sativa gene for water channel protein RWC3, promoter region and complete cds Length = 5325 Score = 101 bits (51), Expect = 2e-18 Identities = 66/71 (92%) Strand = Plus / Minus Query: 361 cggctcttgaaggggatcgccctgatcaccaccacgtggtagatcgccgccagcgccgcg 420 ||||||||||||||||| || ||||||||||||||||||||||| |||||||| ||||| Sbjct: 4910 cggctcttgaaggggattgctctgatcaccaccacgtggtagatggccgccagtgccgct 4851 Query: 421 ccgatgaacgg 431 ||||||||||| Sbjct: 4850 ccgatgaacgg 4840
>dbj|AB016623.1| Oryza sativa gene for RWC-3, complete cds Length = 1403 Score = 101 bits (51), Expect = 2e-18 Identities = 66/71 (92%) Strand = Plus / Minus Query: 361 cggctcttgaaggggatcgccctgatcaccaccacgtggtagatcgccgccagcgccgcg 420 ||||||||||||||||| || ||||||||||||||||||||||| |||||||| ||||| Sbjct: 989 cggctcttgaaggggattgctctgatcaccaccacgtggtagatggccgccagtgccgct 930 Query: 421 ccgatgaacgg 431 ||||||||||| Sbjct: 929 ccgatgaacgg 919
>gb|BT017668.1| Zea mays clone EL01N0441H09.c mRNA sequence Length = 698 Score = 65.9 bits (33), Expect = 1e-07 Identities = 57/65 (87%) Strand = Plus / Minus Query: 364 ctcttgaaggggatcgccctgatcaccaccacgtggtagatcgccgccagcgccgcgccg 423 |||||||| |||||||||||||| | |||| ||||||||| || |||||||| |||||| Sbjct: 426 ctcttgaacgggatcgccctgatgatcacctggtggtagatggcagccagcgcagcgccg 367 Query: 424 atgaa 428 ||||| Sbjct: 366 atgaa 362
>gb|AY243800.1| Zea mays plasma membrane intrinsic protein (PIP1-1) mRNA, complete cds Length = 1086 Score = 65.9 bits (33), Expect = 1e-07 Identities = 57/65 (87%) Strand = Plus / Minus Query: 364 ctcttgaaggggatcgccctgatcaccaccacgtggtagatcgccgccagcgccgcgccg 423 |||||||| |||||||||||||| | |||| ||||||||| || |||||||| |||||| Sbjct: 857 ctcttgaacgggatcgccctgatgatcacctggtggtagatggcagccagcgcagcgccg 798 Query: 424 atgaa 428 ||||| Sbjct: 797 atgaa 793
>emb|X82633.1|ZMTRAPRO Z.mays mRNA for transmembrane protein Length = 1169 Score = 65.9 bits (33), Expect = 1e-07 Identities = 57/65 (87%) Strand = Plus / Minus Query: 364 ctcttgaaggggatcgccctgatcaccaccacgtggtagatcgccgccagcgccgcgccg 423 |||||||| |||||||||||||| | |||| ||||||||| || |||||||| |||||| Sbjct: 914 ctcttgaacgggatcgccctgatgatcacctggtggtagatggcagccagcgcagcgccg 855 Query: 424 atgaa 428 ||||| Sbjct: 854 atgaa 850
>emb|X76911.1|HVEMIP H.vulgare mRNA for transmembrane protein Length = 1225 Score = 63.9 bits (32), Expect = 4e-07 Identities = 56/64 (87%) Strand = Plus / Minus Query: 365 tcttgaaggggatcgccctgatcaccaccacgtggtagatcgccgccagcgccgcgccga 424 ||||||| |||||||| ||||| |||||| ||||||||| || |||||||| ||||||| Sbjct: 926 tcttgaatgggatcgctctgatgaccacctggtggtagatggcggccagcgcggcgccga 867 Query: 425 tgaa 428 |||| Sbjct: 866 tgaa 863
>gb|BT018400.1| Zea mays clone EL01N0323H01.d mRNA sequence Length = 1154 Score = 52.0 bits (26), Expect = 0.002 Identities = 56/66 (84%) Strand = Plus / Minus Query: 363 gctcttgaaggggatcgccctgatcaccaccacgtggtagatcgccgccagcgccgcgcc 422 ||||||||| ||||| |||||||| | |||| ||||||||| || ||||| || ||||| Sbjct: 820 gctcttgaacgggatggccctgatgatcacctggtggtagatggcagccagggcggcgcc 761 Query: 423 gatgaa 428 |||||| Sbjct: 760 gatgaa 755
>gb|DQ207683.1| Zea mays cultivar inbred line Mo17 IDP251 marker Length = 824 Score = 52.0 bits (26), Expect = 0.002 Identities = 56/66 (84%) Strand = Plus / Plus Query: 363 gctcttgaaggggatcgccctgatcaccaccacgtggtagatcgccgccagcgccgcgcc 422 ||||||||| ||||| |||||||| | |||| ||||||||| || ||||| || ||||| Sbjct: 258 gctcttgaacgggatggccctgatgatcacctggtggtagatggcagccagggcggcgcc 317 Query: 423 gatgaa 428 |||||| Sbjct: 318 gatgaa 323
>gb|DQ207682.1| Zea mays cultivar B73 IDP251 marker Length = 763 Score = 52.0 bits (26), Expect = 0.002 Identities = 56/66 (84%) Strand = Plus / Minus Query: 363 gctcttgaaggggatcgccctgatcaccaccacgtggtagatcgccgccagcgccgcgcc 422 ||||||||| ||||| |||||||| | |||| ||||||||| || ||||| || ||||| Sbjct: 519 gctcttgaacgggatggccctgatgatcacctggtggtagatggcagccagggcggcgcc 460 Query: 423 gatgaa 428 |||||| Sbjct: 459 gatgaa 454
>gb|AF326488.1|AF326488 Zea mays plasma membrane integral protein ZmPIP1-4 mRNA, complete cds Length = 1153 Score = 52.0 bits (26), Expect = 0.002 Identities = 56/66 (84%) Strand = Plus / Minus Query: 363 gctcttgaaggggatcgccctgatcaccaccacgtggtagatcgccgccagcgccgcgcc 422 ||||||||| ||||| |||||||| | |||| ||||||||| || ||||| || ||||| Sbjct: 970 gctcttgaacgggatggccctgatgatcacctggtggtagatggcagccagggcggcgcc 911 Query: 423 gatgaa 428 |||||| Sbjct: 910 gatgaa 905
>gb|AF326487.1|AF326487 Zea mays plasma membrane integral protein ZmPIP1-3 mRNA, complete cds Length = 1296 Score = 52.0 bits (26), Expect = 0.002 Identities = 56/66 (84%) Strand = Plus / Minus Query: 363 gctcttgaaggggatcgccctgatcaccaccacgtggtagatcgccgccagcgccgcgcc 422 ||||||||| ||||| |||||||| | |||| ||||||||| || ||||| || ||||| Sbjct: 965 gctcttgaacgggatggccctgatgatcacctggtggtagatggcagccagggcggcgcc 906 Query: 423 gatgaa 428 |||||| Sbjct: 905 gatgaa 900
>gb|AY103580.1| Zea mays PCO072544 mRNA sequence Length = 1633 Score = 52.0 bits (26), Expect = 0.002 Identities = 56/66 (84%) Strand = Plus / Minus Query: 363 gctcttgaaggggatcgccctgatcaccaccacgtggtagatcgccgccagcgccgcgcc 422 ||||||||| ||||| |||||||| | |||| ||||||||| || ||||| || ||||| Sbjct: 1294 gctcttgaacgggatggccctgatgatcacctggtggtagatggcagccagggcggcgcc 1235 Query: 423 gatgaa 428 |||||| Sbjct: 1234 gatgaa 1229
>gb|AF067184.1|AF067184 Samanea saman aquaporin 1 (Aqp1) mRNA, complete cds Length = 1298 Score = 52.0 bits (26), Expect = 0.002 Identities = 59/70 (84%) Strand = Plus / Minus Query: 366 cttgaaggggatcgccctgatcaccaccacgtggtagatcgccgccagcgccgcgccgat 425 ||||||||| || |||||||||||||| |||||||| | || ||||| ||||| || || Sbjct: 916 cttgaagggaatggccctgatcaccacgacgtggtacagtgctgccagtgccgctccaat 857 Query: 426 gaacggtccc 435 ||| |||||| Sbjct: 856 gaatggtccc 847
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 50.1 bits (25), Expect = 0.006 Identities = 34/37 (91%) Strand = Plus / Plus Query: 383 tgatcaccaccacgtggtagatcgccgccagcgccgc 419 |||||||| ||||| ||||||||||||||||| |||| Sbjct: 685604 tgatcaccgccacgaggtagatcgccgccagcaccgc 685640
>emb|BX842573.1| Mycobacterium tuberculosis H37Rv complete genome; segment 2/13 Length = 342416 Score = 50.1 bits (25), Expect = 0.006 Identities = 34/37 (91%) Strand = Plus / Plus Query: 383 tgatcaccaccacgtggtagatcgccgccagcgccgc 419 |||||||| ||||| ||||||||||||||||| |||| Sbjct: 342248 tgatcaccgccacgaggtagatcgccgccagcaccgc 342284
>emb|BX248336.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 3/14 Length = 320050 Score = 50.1 bits (25), Expect = 0.006 Identities = 34/37 (91%) Strand = Plus / Plus Query: 383 tgatcaccaccacgtggtagatcgccgccagcgccgc 419 |||||||| ||||| ||||||||||||||||| |||| Sbjct: 18398 tgatcaccgccacgaggtagatcgccgccagcaccgc 18434
>emb|AJ224327.1|OSAJ4327 Oryza sativa mRNA for aquaporin, complete CDS Length = 1139 Score = 48.1 bits (24), Expect = 0.024 Identities = 51/60 (85%) Strand = Plus / Minus Query: 363 gctcttgaaggggatcgccctgatcaccaccacgtggtagatcgccgccagcgccgcgcc 422 ||||||||| |||||||||||||| | |||| ||||||||| || ||||| || ||||| Sbjct: 885 gctcttgaatgggatcgccctgatgatcacctggtggtagatggcagccagggcagcgcc 826
>gb|AF326489.1|AF326489 Zea mays plasma membrane integral protein ZmPIP1-5 mRNA, complete cds Length = 1338 Score = 48.1 bits (24), Expect = 0.024 Identities = 39/44 (88%) Strand = Plus / Minus Query: 361 cggctcttgaaggggatcgccctgatcaccaccacgtggtagat 404 |||||||||||||||| |||||||| | |||||||||||||| Sbjct: 932 cggctcttgaaggggagggccctgatgatgaccacgtggtagat 889
>dbj|AP004139.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1486_E07 Length = 110494 Score = 48.1 bits (24), Expect = 0.024 Identities = 51/60 (85%) Strand = Plus / Minus Query: 363 gctcttgaaggggatcgccctgatcaccaccacgtggtagatcgccgccagcgccgcgcc 422 ||||||||| |||||||||||||| | |||| ||||||||| || ||||| || ||||| Sbjct: 37291 gctcttgaatgggatcgccctgatgatcacctggtggtagatggcagccagggcagcgcc 37232
>dbj|AP005108.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0461B08 Length = 153743 Score = 48.1 bits (24), Expect = 0.024 Identities = 51/60 (85%) Strand = Plus / Minus Query: 363 gctcttgaaggggatcgccctgatcaccaccacgtggtagatcgccgccagcgccgcgcc 422 ||||||||| |||||||||||||| | |||| ||||||||| || ||||| || ||||| Sbjct: 118844 gctcttgaatgggatcgccctgatgatcacctggtggtagatggcagccagggcagcgcc 118785
>dbj|AB100870.1| Malus x domestica MdPIP1b mRNA for plasma membrane intrinsic protein, complete cds Length = 1223 Score = 48.1 bits (24), Expect = 0.024 Identities = 33/36 (91%) Strand = Plus / Minus Query: 366 cttgaaggggatcgccctgatcaccaccacgtggta 401 |||||| ||||| ||||||||||| ||||||||||| Sbjct: 944 cttgaaagggatggccctgatcacaaccacgtggta 909
>dbj|AB100869.1| Malus x domestica MdPIP1a mRNA for plasma membrane intrinsic protein, complete cds Length = 1260 Score = 48.1 bits (24), Expect = 0.024 Identities = 33/36 (91%) Strand = Plus / Minus Query: 366 cttgaaggggatcgccctgatcaccaccacgtggta 401 |||||| ||||| ||||||||||| ||||||||||| Sbjct: 948 cttgaaagggatggccctgatcacaaccacgtggta 913
>dbj|AK104658.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-311-D06, full insert sequence Length = 1128 Score = 48.1 bits (24), Expect = 0.024 Identities = 51/60 (85%) Strand = Plus / Minus Query: 363 gctcttgaaggggatcgccctgatcaccaccacgtggtagatcgccgccagcgccgcgcc 422 ||||||||| |||||||||||||| | |||| ||||||||| || ||||| || ||||| Sbjct: 918 gctcttgaatgggatcgccctgatgatcacctggtggtagatggcagccagggcagcgcc 859
>dbj|AK103807.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033147A07, full insert sequence Length = 1205 Score = 48.1 bits (24), Expect = 0.024 Identities = 51/60 (85%) Strand = Plus / Minus Query: 363 gctcttgaaggggatcgccctgatcaccaccacgtggtagatcgccgccagcgccgcgcc 422 ||||||||| |||||||||||||| | |||| ||||||||| || ||||| || ||||| Sbjct: 973 gctcttgaatgggatcgccctgatgatcacctggtggtagatggcagccagggcagcgcc 914
>dbj|AK061769.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-039-C05, full insert sequence Length = 1136 Score = 48.1 bits (24), Expect = 0.024 Identities = 51/60 (85%) Strand = Plus / Minus Query: 363 gctcttgaaggggatcgccctgatcaccaccacgtggtagatcgccgccagcgccgcgcc 422 ||||||||| |||||||||||||| | |||| ||||||||| || ||||| || ||||| Sbjct: 918 gctcttgaatgggatcgccctgatgatcacctggtggtagatggcagccagggcagcgcc 859
>gb|AY107675.1| Zea mays PCO112712 mRNA sequence Length = 791 Score = 48.1 bits (24), Expect = 0.024 Identities = 39/44 (88%) Strand = Plus / Minus Query: 361 cggctcttgaaggggatcgccctgatcaccaccacgtggtagat 404 |||||||||||||||| |||||||| | |||||||||||||| Sbjct: 365 cggctcttgaaggggagggccctgatgatgaccacgtggtagat 322
>gb|AF022737.1|AF022737 Oryza sativa transmembrane protein mRNA, complete cds Length = 1140 Score = 48.1 bits (24), Expect = 0.024 Identities = 51/60 (85%) Strand = Plus / Minus Query: 363 gctcttgaaggggatcgccctgatcaccaccacgtggtagatcgccgccagcgccgcgcc 422 ||||||||| |||||||||||||| | |||| ||||||||| || ||||| || ||||| Sbjct: 913 gctcttgaatgggatcgccctgatgatcacctggtggtagatggcagccagggcagcgcc 854
>dbj|AB058679.1| Pyrus communis Py-PIP1-1 mRNA for plasma membrane intrinsic protein 1-1, complete cds Length = 1351 Score = 48.1 bits (24), Expect = 0.024 Identities = 33/36 (91%) Strand = Plus / Minus Query: 366 cttgaaggggatcgccctgatcaccaccacgtggta 401 |||||| ||||| ||||||||||| ||||||||||| Sbjct: 1085 cttgaaagggatggccctgatcacaaccacgtggta 1050
>dbj|AB009665.1| Oryza sativa (japonica cultivar-group) mRNA for water channel protein, complete cds Length = 1116 Score = 48.1 bits (24), Expect = 0.024 Identities = 51/60 (85%) Strand = Plus / Minus Query: 363 gctcttgaaggggatcgccctgatcaccaccacgtggtagatcgccgccagcgccgcgcc 422 ||||||||| |||||||||||||| | |||| ||||||||| || ||||| || ||||| Sbjct: 916 gctcttgaatgggatcgccctgatgatcacctggtggtagatggcagccagggcagcgcc 857
>emb|AJ271796.1|ZMA271796 Zea mays mRNA for plasma membrane intrinsic protein (pip4 gene) Length = 1364 Score = 44.1 bits (22), Expect = 0.37 Identities = 40/46 (86%) Strand = Plus / Minus Query: 359 cgcggctcttgaaggggatcgccctgatcaccaccacgtggtagat 404 ||||||||||||| |||| |||||||| | |||||||||||||| Sbjct: 943 cgcggctcttgaaagggagggccctgatgatgaccacgtggtagat 898
>gb|AC155942.6| Mus musculus 10 BAC RP24-492L7 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 174309 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Plus Query: 48 taataataatttacatacatat 69 |||||||||||||||||||||| Sbjct: 29491 taataataatttacatacatat 29512
>gb|AD000007.1|MSGY414A Mycobacterium tuberculosis sequence from clone y414a Length = 40121 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Plus Query: 404 tcgccgccagcgccgcgccgat 425 |||||||||||||||||||||| Sbjct: 32612 tcgccgccagcgccgcgccgat 32633
>gb|AC153156.1| Ornithorhynchus anatinus chromosome UNK clone OABb-289A1, complete sequence Length = 109794 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 53 ataatttacatacatatgcac 73 ||||||||||||||||||||| Sbjct: 95031 ataatttacatacatatgcac 95011
>ref|NM_053924.1| Rattus norvegicus ATP-binding cassette, sub-family C (CFTR/MRP), member 5 (Abcc5), mRNA Length = 5744 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 376 atcgccctgatcaccaccacg 396 ||||||||||||||||||||| Sbjct: 3461 atcgccctgatcaccaccacg 3481
>gb|AC104706.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1116_F05, complete sequence Length = 119573 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 48 taataataatttacatacatatgca 72 ||||||||| ||||||||||||||| Sbjct: 27479 taataataacttacatacatatgca 27503
>emb|CR702474.2|CNS0G4ZA Tetraodon nigroviridis full-length cDNA Length = 969 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 119 gggaaagtagtacagcaggta 139 ||||||||||||||||||||| Sbjct: 64 gggaaagtagtacagcaggta 44
>emb|CR702005.2|CNS0G4M9 Tetraodon nigroviridis full-length cDNA Length = 970 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 119 gggaaagtagtacagcaggta 139 ||||||||||||||||||||| Sbjct: 64 gggaaagtagtacagcaggta 44
>emb|CR701878.2|CNS0G4IQ Tetraodon nigroviridis full-length cDNA Length = 934 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 119 gggaaagtagtacagcaggta 139 ||||||||||||||||||||| Sbjct: 30 gggaaagtagtacagcaggta 10
>emb|CR700458.2|CNS0G3FA Tetraodon nigroviridis full-length cDNA Length = 965 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 119 gggaaagtagtacagcaggta 139 ||||||||||||||||||||| Sbjct: 64 gggaaagtagtacagcaggta 44
>emb|CR698963.2|CNS0G29R Tetraodon nigroviridis full-length cDNA Length = 969 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 119 gggaaagtagtacagcaggta 139 ||||||||||||||||||||| Sbjct: 64 gggaaagtagtacagcaggta 44
>emb|CR697642.2|CNS0G192 Tetraodon nigroviridis full-length cDNA Length = 961 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 119 gggaaagtagtacagcaggta 139 ||||||||||||||||||||| Sbjct: 56 gggaaagtagtacagcaggta 36
>emb|CR696608.2|CNS0G0GC Tetraodon nigroviridis full-length cDNA Length = 967 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 119 gggaaagtagtacagcaggta 139 ||||||||||||||||||||| Sbjct: 62 gggaaagtagtacagcaggta 42
>emb|CR694961.2|CNS0FZ6L Tetraodon nigroviridis full-length cDNA Length = 969 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 119 gggaaagtagtacagcaggta 139 ||||||||||||||||||||| Sbjct: 64 gggaaagtagtacagcaggta 44
>emb|CR693847.2|CNS0FYBN Tetraodon nigroviridis full-length cDNA Length = 964 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 119 gggaaagtagtacagcaggta 139 ||||||||||||||||||||| Sbjct: 63 gggaaagtagtacagcaggta 43
>emb|CR693583.2|CNS0FY4B Tetraodon nigroviridis full-length cDNA Length = 964 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 119 gggaaagtagtacagcaggta 139 ||||||||||||||||||||| Sbjct: 63 gggaaagtagtacagcaggta 43
>emb|CR693474.2|CNS0FY1A Tetraodon nigroviridis full-length cDNA Length = 934 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 119 gggaaagtagtacagcaggta 139 ||||||||||||||||||||| Sbjct: 50 gggaaagtagtacagcaggta 30
>emb|CR690780.2|CNS0FVYG Tetraodon nigroviridis full-length cDNA Length = 967 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 119 gggaaagtagtacagcaggta 139 ||||||||||||||||||||| Sbjct: 62 gggaaagtagtacagcaggta 42
>emb|CR689984.2|CNS0FVCC Tetraodon nigroviridis full-length cDNA Length = 935 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 119 gggaaagtagtacagcaggta 139 ||||||||||||||||||||| Sbjct: 30 gggaaagtagtacagcaggta 10
>emb|CR686426.2|CNS0FSLI Tetraodon nigroviridis full-length cDNA Length = 960 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 119 gggaaagtagtacagcaggta 139 ||||||||||||||||||||| Sbjct: 55 gggaaagtagtacagcaggta 35
>emb|CR685561.2|CNS0FRXH Tetraodon nigroviridis full-length cDNA Length = 961 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 119 gggaaagtagtacagcaggta 139 ||||||||||||||||||||| Sbjct: 55 gggaaagtagtacagcaggta 35
>emb|CR685520.2|CNS0FRWC Tetraodon nigroviridis full-length cDNA Length = 964 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 119 gggaaagtagtacagcaggta 139 ||||||||||||||||||||| Sbjct: 64 gggaaagtagtacagcaggta 44
>emb|CR684429.2|CNS0FR21 Tetraodon nigroviridis full-length cDNA Length = 975 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 119 gggaaagtagtacagcaggta 139 ||||||||||||||||||||| Sbjct: 68 gggaaagtagtacagcaggta 48
>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence Length = 3806533 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 405 cgccgccagcgccgcgccgat 425 ||||||||||||||||||||| Sbjct: 2953569 cgccgccagcgccgcgccgat 2953589
>emb|AJ310639.1|HVU310639 Hordeum vulgare partial pip1 gene for putative aquaporin Length = 1291 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Minus Query: 396 gtggtagatcgccgccagcgccgcgccgatgaa 428 ||||||||| || |||||||| ||||||||||| Sbjct: 1288 gtggtagatggcggccagcgcggcgccgatgaa 1256
>emb|AJ001292.1|CPPIPA2 Craterostigma plantagineum mRNA for major intrinsic protein PIPa2 Length = 1189 Score = 42.1 bits (21), Expect = 1.5 Identities = 57/69 (82%) Strand = Plus / Minus Query: 366 cttgaaggggatcgccctgatcaccaccacgtggtagatcgccgccagcgccgcgccgat 425 |||||| || || ||||| ||||| ||||||||||| | || || ||||| |||||||| Sbjct: 920 cttgaatggaatggcccttatcacaaccacgtggtaaagtgcggcgagcgctgcgccgat 861 Query: 426 gaacggtcc 434 ||| ||||| Sbjct: 860 gaatggtcc 852
>emb|BX537273.16| Zebrafish DNA sequence from clone CH211-151F2 in linkage group 10, complete sequence Length = 167226 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 48 taataataatttacatacata 68 ||||||||||||||||||||| Sbjct: 60087 taataataatttacatacata 60107
>emb|AJ843992.1| Plantago major partial mRNA for aquaporin 2 (aqp2 gene) Length = 1089 Score = 42.1 bits (21), Expect = 1.5 Identities = 33/37 (89%) Strand = Plus / Minus Query: 365 tcttgaaggggatcgccctgatcaccaccacgtggta 401 ||||||| ||||| || |||||||||||||| ||||| Sbjct: 841 tcttgaatgggatagctctgatcaccaccacatggta 805
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 405 cgccgccagcgccgcgccgat 425 ||||||||||||||||||||| Sbjct: 4187442 cgccgccagcgccgcgccgat 4187462
>gb|AC116631.6| Homo sapiens BAC clone RP11-429B11 from 4, complete sequence Length = 125133 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 53 ataatttacatacatatgcac 73 ||||||||||||||||||||| Sbjct: 18615 ataatttacatacatatgcac 18635
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 48 taataataatttacatacatatgca 72 ||||||||| ||||||||||||||| Sbjct: 15861488 taataataacttacatacatatgca 15861464 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 357 gccgcggctcttgaagggga 376 |||||||||||||||||||| Sbjct: 6211026 gccgcggctcttgaagggga 6211045
>dbj|AB206098.1| Mimosa pudica pip1;1 mRNA for plasma membrane intrinsic protein 1;1, complete cds Length = 1096 Score = 42.1 bits (21), Expect = 1.5 Identities = 48/57 (84%) Strand = Plus / Minus Query: 379 gccctgatcaccaccacgtggtagatcgccgccagcgccgcgccgatgaacggtccc 435 |||||||||||||| |||||||| | || |||| ||| || |||||||| |||||| Sbjct: 921 gccctgatcaccacgacgtggtacagtgctgccaacgctgctccgatgaatggtccc 865
>emb|CR361565.8| Zebrafish DNA sequence from clone CH211-242L1 in linkage group 22, complete sequence Length = 164475 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 49 aataataatttacatacatat 69 ||||||||||||||||||||| Sbjct: 30255 aataataatttacatacatat 30275
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence Length = 2914771 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 171 ggcgacgctgccggcaggcac 191 ||||||||||||||||||||| Sbjct: 2595820 ggcgacgctgccggcaggcac 2595840
>emb|BX005014.5| Zebrafish DNA sequence from clone CH211-103E2 in linkage group 10, complete sequence Length = 160621 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 48 taataataatttacatacata 68 ||||||||||||||||||||| Sbjct: 47614 taataataatttacatacata 47634
>dbj|AB020209.1| Rattus norvegicus mRNA for multidrug resistance protein (MRP5), complete cds Length = 5744 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 376 atcgccctgatcaccaccacg 396 ||||||||||||||||||||| Sbjct: 3461 atcgccctgatcaccaccacg 3481
>ref|XM_476112.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 753 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 357 gccgcggctcttgaagggga 376 |||||||||||||||||||| Sbjct: 354 gccgcggctcttgaagggga 335
>gb|AC167665.2| Culex pipiens quinquefasciatus, clone Culex pipiens quinquefasciatus-3940135D9, complete sequence Length = 93659 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 402 gatcgccgccagcgccgcgc 421 |||||||||||||||||||| Sbjct: 93532 gatcgccgccagcgccgcgc 93513
>ref|NM_187081.2| Oryza sativa (japonica cultivar-group), mRNA Length = 1215 Score = 40.1 bits (20), Expect = 5.8 Identities = 32/36 (88%) Strand = Plus / Minus Query: 396 gtggtagatcgccgccagcgccgcgccgatgaacgg 431 |||||| | |||||| | |||||||||||||||||| Sbjct: 898 gtggtacagcgccgcgatcgccgcgccgatgaacgg 863
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 405 cgccgccagcgccgcgccga 424 |||||||||||||||||||| Sbjct: 2703938 cgccgccagcgccgcgccga 2703957
>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome Length = 3345170 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 402 gatcgccgccagcgccgcgccgat 425 |||| ||||||||||||||||||| Sbjct: 708311 gatctccgccagcgccgcgccgat 708334
>gb|AC130732.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0708D12, complete sequence Length = 172647 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 357 gccgcggctcttgaagggga 376 |||||||||||||||||||| Sbjct: 41381 gccgcggctcttgaagggga 41400
>gb|AC167201.6| Mus musculus 10 BAC RP23-402J11 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 216676 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 211 cagatttgagaactattaca 230 |||||||||||||||||||| Sbjct: 46344 cagatttgagaactattaca 46325
>gb|AC166171.2| Mus musculus BAC clone RP23-136L14 from chromosome 16, complete sequence Length = 199601 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 90 tgcgtggtactggtacaatg 109 |||||||||||||||||||| Sbjct: 64904 tgcgtggtactggtacaatg 64885
>gb|AC117081.2| Dictyostelium discoideum chromosome 2 map 5862124-6045772 strain AX4, complete sequence Length = 183648 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 48 taataataatttacatacat 67 |||||||||||||||||||| Sbjct: 3763 taataataatttacatacat 3744
>gb|AC122907.4| Mus musculus BAC clone RP23-49I4 from chromosome 15, complete sequence Length = 233904 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 47 ttaataataatttacatacatatg 70 ||||||||||| |||||||||||| Sbjct: 205619 ttaataataatatacatacatatg 205596
>gb|AC160125.2| Mus musculus BAC clone RP23-317M11 from chromosome 9, complete sequence Length = 209835 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 90 tgcgtggtactggtacaatg 109 |||||||||||||||||||| Sbjct: 199385 tgcgtggtactggtacaatg 199366
>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence Length = 4895836 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 408 cgccagcgccgcgccgatga 427 |||||||||||||||||||| Sbjct: 4160264 cgccagcgccgcgccgatga 4160245
>emb|Y17691.1|XCT17691 Xanthomonas campestris Tn5044 transposon Length = 10840 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 405 cgccgccagcgccgcgccgatgaa 428 |||| ||||||||||||||||||| Sbjct: 882 cgccaccagcgccgcgccgatgaa 859
>emb|BX511098.5| Zebrafish DNA sequence from clone CH211-202L3 in linkage group 5, complete sequence Length = 72481 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 44 ttcttaataataatttacat 63 |||||||||||||||||||| Sbjct: 25089 ttcttaataataatttacat 25108
>gb|AC104511.5| Drosophila melanogaster X BAC RP98-39D14 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 166000 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 48 taataataatttacatacat 67 |||||||||||||||||||| Sbjct: 100924 taataataatttacatacat 100943
>gb|AE005860.1| Caulobacter crescentus CB15 section 186 of 359 of the complete genome Length = 11137 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 395 cgtggtagatcgccgccagcgccgcgcc 422 |||||||||||| |||||||| |||||| Sbjct: 9054 cgtggtagatcggcgccagcggcgcgcc 9081
>emb|BX323601.6| Zebrafish DNA sequence from clone RP71-14P11, complete sequence Length = 207067 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 405 cgccgccagcgccgcgccgatgaa 428 |||| ||||||||||||||||||| Sbjct: 174840 cgccaccagcgccgcgccgatgaa 174817
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 404 tcgccgccagcgccgcgccg 423 |||||||||||||||||||| Sbjct: 4115711 tcgccgccagcgccgcgccg 4115730
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 5.8 Identities = 32/36 (88%) Strand = Plus / Minus Query: 396 gtggtagatcgccgccagcgccgcgccgatgaacgg 431 |||||| | |||||| | |||||||||||||||||| Sbjct: 15306495 gtggtacagcgccgcgatcgccgcgccgatgaacgg 15306460
>emb|BX004760.10| Zebrafish DNA sequence from clone CH211-222O4 in linkage group 3, complete sequence Length = 190220 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 48 taataataatttacatacat 67 |||||||||||||||||||| Sbjct: 69241 taataataatttacatacat 69260
>gb|AC011763.6|AC011763 Drosophila melanogaster, chromosome 3R, region 90A-90A, BAC clone BACR48C05, complete sequence Length = 164450 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 59 tacatacatatgcacgctgg 78 |||||||||||||||||||| Sbjct: 141958 tacatacatatgcacgctgg 141939
>gb|AC160029.3| Mus musculus 10 BAC RP24-105I7 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 184696 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 211 cagatttgagaactattaca 230 |||||||||||||||||||| Sbjct: 18168 cagatttgagaactattaca 18187
>gb|AC155299.2| Mus musculus BAC clone RP24-229D17 from chromosome 15, complete sequence Length = 198559 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 47 ttaataataatttacatacatatg 70 ||||||||||| |||||||||||| Sbjct: 83579 ttaataataatatacatacatatg 83602
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 404 tcgccgccagcgccgcgccg 423 |||||||||||||||||||| Sbjct: 3230880 tcgccgccagcgccgcgccg 3230899
>dbj|AP003802.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1047_A06 Length = 111673 Score = 40.1 bits (20), Expect = 5.8 Identities = 32/36 (88%) Strand = Plus / Minus Query: 396 gtggtagatcgccgccagcgccgcgccgatgaacgg 431 |||||| | |||||| | |||||||||||||||||| Sbjct: 13494 gtggtacagcgccgcgatcgccgcgccgatgaacgg 13459
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 408 cgccagcgccgcgccgatga 427 |||||||||||||||||||| Sbjct: 1521793 cgccagcgccgcgccgatga 1521774
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 405 cgccgccagcgccgcgccga 424 |||||||||||||||||||| Sbjct: 5795700 cgccgccagcgccgcgccga 5795719
>dbj|AP004668.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0475E07 Length = 139961 Score = 40.1 bits (20), Expect = 5.8 Identities = 32/36 (88%) Strand = Plus / Minus Query: 396 gtggtagatcgccgccagcgccgcgccgatgaacgg 431 |||||| | |||||| | |||||||||||||||||| Sbjct: 92508 gtggtacagcgccgcgatcgccgcgccgatgaacgg 92473
>emb|AL929213.5| Zebrafish DNA sequence from clone CH211-144A19, complete sequence Length = 169897 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 44 ttcttaataataatttacat 63 |||||||||||||||||||| Sbjct: 69809 ttcttaataataatttacat 69790
>dbj|AK110599.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-168-G03, full insert sequence Length = 853 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 357 gccgcggctcttgaagggga 376 |||||||||||||||||||| Sbjct: 97 gccgcggctcttgaagggga 116
>dbj|AK110596.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-168-F12, full insert sequence Length = 1272 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 357 gccgcggctcttgaagggga 376 |||||||||||||||||||| Sbjct: 538 gccgcggctcttgaagggga 519
>dbj|AK072632.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023132K03, full insert sequence Length = 1215 Score = 40.1 bits (20), Expect = 5.8 Identities = 32/36 (88%) Strand = Plus / Minus Query: 396 gtggtagatcgccgccagcgccgcgccgatgaacgg 431 |||||| | |||||| | |||||||||||||||||| Sbjct: 898 gtggtacagcgccgcgatcgccgcgccgatgaacgg 863
>emb|BX255893.5| Zebrafish DNA sequence from clone CH211-272H10 in linkage group 4, complete sequence Length = 99176 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 48 taataataatttacatacat 67 |||||||||||||||||||| Sbjct: 76094 taataataatttacatacat 76075
>gb|AE003717.2| Drosophila melanogaster chromosome 3R, section 55 of 118 of the complete sequence Length = 217725 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 59 tacatacatatgcacgctgg 78 |||||||||||||||||||| Sbjct: 123669 tacatacatatgcacgctgg 123650
>gb|AE003491.4| Drosophila melanogaster chromosome X, section 43 of 74 of the complete sequence Length = 332030 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 48 taataataatttacatacat 67 |||||||||||||||||||| Sbjct: 23638 taataataatttacatacat 23619
>emb|CT030124.12| Mouse DNA sequence from clone RP23-100B15 on chromosome 9, complete sequence Length = 203615 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 90 tgcgtggtactggtacaatg 109 |||||||||||||||||||| Sbjct: 196039 tgcgtggtactggtacaatg 196058
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 166 gaacaggcgacgctgccggc 185 |||||||||||||||||||| Sbjct: 1380459 gaacaggcgacgctgccggc 1380478
>emb|BX005187.9| Mouse DNA sequence from clone RP23-187O10 on chromosome X, complete sequence Length = 98612 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 90 tgcgtggtactggtacaatg 109 |||||||||||||||||||| Sbjct: 32191 tgcgtggtactggtacaatg 32172
>gb|AC144628.3| Mus musculus BAC clone RP23-463L22 from 14, complete sequence Length = 174162 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 90 tgcgtggtactggtacaatg 109 |||||||||||||||||||| Sbjct: 50679 tgcgtggtactggtacaatg 50660
>gb|AC127297.4| Mus musculus BAC clone RP23-395B13 from chromosome 3, complete sequence Length = 222889 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 104 acaatgcaaaaggtagggaa 123 |||||||||||||||||||| Sbjct: 94243 acaatgcaaaaggtagggaa 94262 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,347,666 Number of Sequences: 3902068 Number of extensions: 3347666 Number of successful extensions: 74939 Number of sequences better than 10.0: 111 Number of HSP's better than 10.0 without gapping: 113 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 73401 Number of HSP's gapped (non-prelim): 1536 length of query: 435 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 413 effective length of database: 17,147,199,772 effective search space: 7081793505836 effective search space used: 7081793505836 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)