ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart23d04
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_467457.1| Oryza sativa (japonica cultivar-group), mRNA 159 1e-35
2ref|XM_507525.1| PREDICTED Oryza sativa (japonica cultivar-group... 159 1e-35
3ref|XM_506937.2| PREDICTED Oryza sativa (japonica cultivar-group... 159 1e-35
4dbj|AK103643.1| Oryza sativa (japonica cultivar-group) cDNA clon... 159 1e-35
5dbj|AK068469.1| Oryza sativa (japonica cultivar-group) cDNA clon... 159 1e-35
6dbj|AK104867.1| Oryza sativa (japonica cultivar-group) cDNA clon... 151 3e-33
7dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 147 4e-32
8dbj|AP004047.3| Oryza sativa (japonica cultivar-group) genomic D... 147 4e-32
9dbj|AP004165.3| Oryza sativa (japonica cultivar-group) genomic D... 147 4e-32
10gb|AY109878.1| Zea mays CL3881_1 mRNA sequence 145 2e-31
11gb|AF536565.1| Saccharum hybrid cultivar phosphoribosyl pyrophos... 137 4e-29
12ref|NM_129852.2| Arabidopsis thaliana ribose phosphate diphospho... 56 1e-04
13gb|BT000083.1| Arabidopsis thaliana putative ribose phosphate py... 56 1e-04
14emb|AJ012407.1|ATH012407 Arabidopsis thaliana mRNA for phosphori... 56 1e-04
15gb|AY128402.1| Arabidopsis thaliana putative ribose phosphate py... 56 1e-04
16gb|AC006931.6| Arabidopsis thaliana chromosome 2 clone F7D19 map... 56 1e-04
17gb|AC006580.4| Arabidopsis thaliana chromosome 2 clone F23E6 map... 56 1e-04
18emb|BX819240.1|CNS0A8XX Arabidopsis thaliana Full-length cDNA Co... 56 1e-04
19gb|AY087406.1| Arabidopsis thaliana clone 35051 mRNA, complete s... 56 1e-04
20dbj|AK175962.1| Arabidopsis thaliana mRNA for putative ribose ph... 56 1e-04
21emb|BX820312.1|CNS0A8NI Arabidopsis thaliana Full-length cDNA Co... 54 4e-04
22emb|BX820243.1|CNS0A8KF Arabidopsis thaliana Full-length cDNA Co... 54 4e-04
23dbj|AP004918.1| Lotus japonicus genomic DNA, chromosome 2, clone... 48 0.027
24emb|AJ006943.1|SOL6943 Spinacia oleracea mRNA for phosphoribosyl... 46 0.11
25gb|AC010967.3| Homo sapiens BAC clone RP11-7H13 from 2, complete... 44 0.43
26gb|AC093198.3| Drosophila melanogaster clone BACR03G24, complete... 42 1.7
27gb|AC006402.12| Drosophila melanogaster clone BACR08D17, complet... 42 1.7
28emb|BX469901.13| Zebrafish DNA sequence from clone CH211-150E8 i... 42 1.7
29gb|AC090415.5| Homo sapiens chromosome 18, clone RP11-529J17, co... 42 1.7
30gb|AC091691.7| Homo sapiens chromosome 18, clone RP11-47G4, comp... 42 1.7
31gb|AC092642.2| Homo sapiens BAC clone RP11-391P1 from 2, complet... 42 1.7
32gb|AE003666.6| Drosophila melanogaster chromosome 2L, section 75... 42 1.7
33gb|AC002503.1|AC002503 Drosophila melanogaster (P1 DS05187 (D54)... 42 1.7
34gb|AC110222.9| Mus musculus chromosome 3, clone RP24-211P23, com... 40 6.6
35gb|AC166939.2| Mus musculus BAC clone RP23-72K19 from chromosome... 40 6.6
36gb|AC122890.4| Mus musculus BAC clone RP23-63O14 from 8, complet... 40 6.6
37gb|AC026702.6| Homo sapiens chromosome 5 clone CTC-575I10, compl... 40 6.6
38gb|AC008387.6| Homo sapiens chromosome 5 clone CTC-229P9, comple... 40 6.6
39dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.6
40dbj|AP003214.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.6 
>ref|XM_467457.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1221

 Score =  159 bits (80), Expect = 1e-35
 Identities = 166/192 (86%), Gaps = 2/192 (1%)
 Strand = Plus / Minus

                                                                        
Query: 301  gttcatatctgaagggcatcagcgatcgagctagcaaggctcaacacctcaaatggaggt 360
            |||||||| ||||||||||| || ||||| | ||||||||||||||||||||||||||||
Sbjct: 1056 gttcatatttgaagggcatccgcaatcgaaccagcaaggctcaacacctcaaatggaggt 997

                                                                        
Query: 361  tgttggctgatggctttcaccgtttgagggcatgaatccgtgatccagaagtaagcaaac 420
            |||||| ||||||||||||| ||||||||||| || || ||||||||||| || ||||||
Sbjct: 996  tgttggttgatggctttcactgtttgagggcaggagtcagtgatccagaaatacgcaaac 937

                                                                        
Query: 421  tggtcacctggctcagcagaattagcagtca-tgaagcgttcatatgactgattggggaa 479
            | |||| ||| | |||| |||||||  || | ||||||| ||||| ||||| ||||| ||
Sbjct: 936  ttgtcagctgacccagcggaattag-tgtgagtgaagcgctcatacgactgcttgggaaa 878

                        
Query: 480  cacagcatgagt 491
             |||||||||||
Sbjct: 877  aacagcatgagt 866
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>ref|XM_507525.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1479_B12.26 mRNA
          Length = 1246

 Score =  159 bits (80), Expect = 1e-35
 Identities = 166/192 (86%), Gaps = 2/192 (1%)
 Strand = Plus / Minus

                                                                        
Query: 301  gttcatatctgaagggcatcagcgatcgagctagcaaggctcaacacctcaaatggaggt 360
            |||||||| ||||||||||| || ||||| | ||||||||||||||||||||||||||||
Sbjct: 1056 gttcatatttgaagggcatccgcaatcgaaccagcaaggctcaacacctcaaatggaggt 997

                                                                        
Query: 361  tgttggctgatggctttcaccgtttgagggcatgaatccgtgatccagaagtaagcaaac 420
            |||||| ||||||||||||| ||||||||||| || || ||||||||||| || ||||||
Sbjct: 996  tgttggttgatggctttcactgtttgagggcaggagtcagtgatccagaaatacgcaaac 937

                                                                        
Query: 421  tggtcacctggctcagcagaattagcagtca-tgaagcgttcatatgactgattggggaa 479
            | |||| ||| | |||| |||||||  || | ||||||| ||||| ||||| ||||| ||
Sbjct: 936  ttgtcagctgacccagcggaattag-tgtgagtgaagcgctcatacgactgcttgggaaa 878

                        
Query: 480  cacagcatgagt 491
             |||||||||||
Sbjct: 877  aacagcatgagt 866
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>ref|XM_506937.2| PREDICTED Oryza sativa (japonica cultivar-group), OJ1479_B12.26 mRNA
          Length = 1382

 Score =  159 bits (80), Expect = 1e-35
 Identities = 166/192 (86%), Gaps = 2/192 (1%)
 Strand = Plus / Minus

                                                                        
Query: 301  gttcatatctgaagggcatcagcgatcgagctagcaaggctcaacacctcaaatggaggt 360
            |||||||| ||||||||||| || ||||| | ||||||||||||||||||||||||||||
Sbjct: 1214 gttcatatttgaagggcatccgcaatcgaaccagcaaggctcaacacctcaaatggaggt 1155

                                                                        
Query: 361  tgttggctgatggctttcaccgtttgagggcatgaatccgtgatccagaagtaagcaaac 420
            |||||| ||||||||||||| ||||||||||| || || ||||||||||| || ||||||
Sbjct: 1154 tgttggttgatggctttcactgtttgagggcaggagtcagtgatccagaaatacgcaaac 1095

                                                                        
Query: 421  tggtcacctggctcagcagaattagcagtca-tgaagcgttcatatgactgattggggaa 479
            | |||| ||| | |||| |||||||  || | ||||||| ||||| ||||| ||||| ||
Sbjct: 1094 ttgtcagctgacccagcggaattag-tgtgagtgaagcgctcatacgactgcttgggaaa 1036

                        
Query: 480  cacagcatgagt 491
             |||||||||||
Sbjct: 1035 aacagcatgagt 1024
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>dbj|AK103643.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033134O12, full
            insert sequence
          Length = 1245

 Score =  159 bits (80), Expect = 1e-35
 Identities = 166/192 (86%), Gaps = 2/192 (1%)
 Strand = Plus / Minus

                                                                        
Query: 301  gttcatatctgaagggcatcagcgatcgagctagcaaggctcaacacctcaaatggaggt 360
            |||||||| ||||||||||| || ||||| | ||||||||||||||||||||||||||||
Sbjct: 1055 gttcatatttgaagggcatccgcaatcgaaccagcaaggctcaacacctcaaatggaggt 996

                                                                        
Query: 361  tgttggctgatggctttcaccgtttgagggcatgaatccgtgatccagaagtaagcaaac 420
            |||||| ||||||||||||| ||||||||||| || || ||||||||||| || ||||||
Sbjct: 995  tgttggttgatggctttcactgtttgagggcaggagtcagtgatccagaaatacgcaaac 936

                                                                        
Query: 421  tggtcacctggctcagcagaattagcagtca-tgaagcgttcatatgactgattggggaa 479
            | |||| ||| | |||| |||||||  || | ||||||| ||||| ||||| ||||| ||
Sbjct: 935  ttgtcagctgacccagcggaattag-tgtgagtgaagcgctcatacgactgcttgggaaa 877

                        
Query: 480  cacagcatgagt 491
             |||||||||||
Sbjct: 876  aacagcatgagt 865
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>dbj|AK068469.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013156D24, full
            insert sequence
          Length = 1382

 Score =  159 bits (80), Expect = 1e-35
 Identities = 166/192 (86%), Gaps = 2/192 (1%)
 Strand = Plus / Minus

                                                                        
Query: 301  gttcatatctgaagggcatcagcgatcgagctagcaaggctcaacacctcaaatggaggt 360
            |||||||| ||||||||||| || ||||| | ||||||||||||||||||||||||||||
Sbjct: 1214 gttcatatttgaagggcatccgcaatcgaaccagcaaggctcaacacctcaaatggaggt 1155

                                                                        
Query: 361  tgttggctgatggctttcaccgtttgagggcatgaatccgtgatccagaagtaagcaaac 420
            |||||| ||||||||||||| ||||||||||| || || ||||||||||| || ||||||
Sbjct: 1154 tgttggttgatggctttcactgtttgagggcaggagtcagtgatccagaaatacgcaaac 1095

                                                                        
Query: 421  tggtcacctggctcagcagaattagcagtca-tgaagcgttcatatgactgattggggaa 479
            | |||| ||| | |||| |||||||  || | ||||||| ||||| ||||| ||||| ||
Sbjct: 1094 ttgtcagctgacccagcggaattag-tgtgagtgaagcgctcatacgactgcttgggaaa 1036

                        
Query: 480  cacagcatgagt 491
             |||||||||||
Sbjct: 1035 aacagcatgagt 1024
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>dbj|AK104867.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-043-H04, full
            insert sequence
          Length = 1221

 Score =  151 bits (76), Expect = 3e-33
 Identities = 165/192 (85%), Gaps = 2/192 (1%)
 Strand = Plus / Minus

                                                                        
Query: 301  gttcatatctgaagggcatcagcgatcgagctagcaaggctcaacacctcaaatggaggt 360
            |||||||| ||||||||||| || ||||| | ||||||||||||||||||||||||||||
Sbjct: 1056 gttcatatttgaagggcatccgcaatcgaaccagcaaggctcaacacctcaaatggaggt 997

                                                                        
Query: 361  tgttggctgatggctttcaccgtttgagggcatgaatccgtgatccagaagtaagcaaac 420
            || ||| ||||||||||||| ||||||||||| || || ||||||||||| || ||||||
Sbjct: 996  tgctggttgatggctttcactgtttgagggcaggagtcagtgatccagaaatacgcaaac 937

                                                                        
Query: 421  tggtcacctggctcagcagaattagcagtca-tgaagcgttcatatgactgattggggaa 479
            | |||| ||| | |||| |||||||  || | ||||||| ||||| ||||| ||||| ||
Sbjct: 936  ttgtcagctgacccagcggaattag-tgtgagtgaagcgctcatacgactgcttgggaaa 878

                        
Query: 480  cacagcatgagt 491
             |||||||||||
Sbjct: 877  aacagcatgagt 866
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  147 bits (74), Expect = 4e-32
 Identities = 113/126 (89%)
 Strand = Plus / Minus

                                                                            
Query: 301      gttcatatctgaagggcatcagcgatcgagctagcaaggctcaacacctcaaatggaggt 360
                |||||||| ||||||||||| || ||||| | ||||||||||||||||||||||||||||
Sbjct: 29646083 gttcatatttgaagggcatccgcaatcgaaccagcaaggctcaacacctcaaatggaggt 29646024

                                                                            
Query: 361      tgttggctgatggctttcaccgtttgagggcatgaatccgtgatccagaagtaagcaaac 420
                |||||| ||||||||||||| ||||||||||| || || ||||||||||| || ||||||
Sbjct: 29646023 tgttggttgatggctttcactgtttgagggcaggagtcagtgatccagaaatacgcaaac 29645964

                      
Query: 421      tggtca 426
                | ||||
Sbjct: 29645963 ttgtca 29645958



 Score = 40.1 bits (20), Expect = 6.6
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                        
Query: 452      tgaagcgttcatatgactgattggggaacacagcatgagt 491
                ||||||| ||||| ||||| ||||| || |||||||||||
Sbjct: 29645855 tgaagcgctcatacgactgcttgggaaaaacagcatgagt 29645816
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>dbj|AP004047.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1191_G08
          Length = 172832

 Score =  147 bits (74), Expect = 4e-32
 Identities = 113/126 (89%)
 Strand = Plus / Minus

                                                                         
Query: 301   gttcatatctgaagggcatcagcgatcgagctagcaaggctcaacacctcaaatggaggt 360
             |||||||| ||||||||||| || ||||| | ||||||||||||||||||||||||||||
Sbjct: 15062 gttcatatttgaagggcatccgcaatcgaaccagcaaggctcaacacctcaaatggaggt 15003

                                                                         
Query: 361   tgttggctgatggctttcaccgtttgagggcatgaatccgtgatccagaagtaagcaaac 420
             |||||| ||||||||||||| ||||||||||| || || ||||||||||| || ||||||
Sbjct: 15002 tgttggttgatggctttcactgtttgagggcaggagtcagtgatccagaaatacgcaaac 14943

                   
Query: 421   tggtca 426
             | ||||
Sbjct: 14942 ttgtca 14937



 Score = 40.1 bits (20), Expect = 6.6
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                     
Query: 452   tgaagcgttcatatgactgattggggaacacagcatgagt 491
             ||||||| ||||| ||||| ||||| || |||||||||||
Sbjct: 14834 tgaagcgctcatacgactgcttgggaaaaacagcatgagt 14795
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>dbj|AP004165.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1479_B12
          Length = 127089

 Score =  147 bits (74), Expect = 4e-32
 Identities = 113/126 (89%)
 Strand = Plus / Minus

                                                                          
Query: 301    gttcatatctgaagggcatcagcgatcgagctagcaaggctcaacacctcaaatggaggt 360
              |||||||| ||||||||||| || ||||| | ||||||||||||||||||||||||||||
Sbjct: 103804 gttcatatttgaagggcatccgcaatcgaaccagcaaggctcaacacctcaaatggaggt 103745

                                                                          
Query: 361    tgttggctgatggctttcaccgtttgagggcatgaatccgtgatccagaagtaagcaaac 420
              |||||| ||||||||||||| ||||||||||| || || ||||||||||| || ||||||
Sbjct: 103744 tgttggttgatggctttcactgtttgagggcaggagtcagtgatccagaaatacgcaaac 103685

                    
Query: 421    tggtca 426
              | ||||
Sbjct: 103684 ttgtca 103679



 Score = 40.1 bits (20), Expect = 6.6
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                      
Query: 452    tgaagcgttcatatgactgattggggaacacagcatgagt 491
              ||||||| ||||| ||||| ||||| || |||||||||||
Sbjct: 103576 tgaagcgctcatacgactgcttgggaaaaacagcatgagt 103537
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>gb|AY109878.1| Zea mays CL3881_1 mRNA sequence
          Length = 727

 Score =  145 bits (73), Expect = 2e-31
 Identities = 160/189 (84%)
 Strand = Plus / Plus

                                                                       
Query: 303 tcatatctgaagggcatcagcgatcgagctagcaaggctcaacacctcaaatggaggttg 362
           |||||||||||| ||||| || || |||| ||| |||||||  |||||||||||||||  
Sbjct: 258 tcatatctgaagagcatctgcaattgagccagcgaggctcagaacctcaaatggaggtct 317

                                                                       
Query: 363 ttggctgatggctttcaccgtttgagggcatgaatccgtgatccagaagtaagcaaactg 422
           ||| |  || ||||| || || || |||||||| ||||||||||||||||||||||| ||
Sbjct: 318 ttgcccaatagcttttactgtgtgtgggcatgagtccgtgatccagaagtaagcaaattg 377

                                                                       
Query: 423 gtcacctggctcagcagaattagcagtcatgaagcgttcatatgactgattggggaacac 482
           ||| |||||| |||||||| |||  | |||||| |||||||||||||| || ||||||||
Sbjct: 378 gtcgcctggcccagcagaactagacgccatgaaacgttcatatgactgcttagggaacac 437

                    
Query: 483 agcatgagt 491
           |||||||||
Sbjct: 438 agcatgagt 446
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>gb|AF536565.1| Saccharum hybrid cultivar phosphoribosyl pyrophosphate synthetase
            (PRS4) mRNA, complete cds
          Length = 1303

 Score =  137 bits (69), Expect = 4e-29
 Identities = 156/185 (84%)
 Strand = Plus / Minus

                                                                        
Query: 307  atctgaagggcatcagcgatcgagctagcaaggctcaacacctcaaatggaggttgttgg 366
            |||||||| |||||||| || |||| |||||||||||  |||||||||||||||  ||||
Sbjct: 1092 atctgaagagcatcagcaattgagccagcaaggctcagaacctcaaatggaggtctttgg 1033

                                                                        
Query: 367  ctgatggctttcaccgtttgagggcatgaatccgtgatccagaagtaagcaaactggtca 426
            |  || ||||| || || || |||||||| ||||||||||||||||||||||||||||| 
Sbjct: 1032 ccaatagcttttactgtgtgtgggcatgagtccgtgatccagaagtaagcaaactggtcg 973

                                                                        
Query: 427  cctggctcagcagaattagcagtcatgaagcgttcatatgactgattggggaacacagca 486
            |||||| |||||||| | |  | |||||| |||||||||||  | |  ||||||||||||
Sbjct: 972  cctggcccagcagaaatcgacgacatgaaacgttcatatgagcgctcagggaacacagca 913

                 
Query: 487  tgagt 491
            |||||
Sbjct: 912  tgagt 908
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>ref|NM_129852.2| Arabidopsis thaliana ribose phosphate diphosphokinase AT2G42910 mRNA,
            complete cds
          Length = 1345

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 46/52 (88%)
 Strand = Plus / Minus

                                                                
Query: 369  gatggctttcaccgtttgagggcatgaatccgtgatccagaagtaagcaaac 420
            |||||| || ||||| || || || |||||||||||||||||||||||||||
Sbjct: 1076 gatggccttaaccgtctgtggacaagaatccgtgatccagaagtaagcaaac 1025
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>gb|BT000083.1| Arabidopsis thaliana putative ribose phosphate pyrophosphokinase
           (At2g42910) mRNA, complete cds
          Length = 1065

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 46/52 (88%)
 Strand = Plus / Minus

                                                               
Query: 369 gatggctttcaccgtttgagggcatgaatccgtgatccagaagtaagcaaac 420
           |||||| || ||||| || || || |||||||||||||||||||||||||||
Sbjct: 948 gatggccttaaccgtctgtggacaagaatccgtgatccagaagtaagcaaac 897
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>emb|AJ012407.1|ATH012407 Arabidopsis thaliana mRNA for phosphoribosyl diphosphate synthase
            isozyme 4
          Length = 1283

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 46/52 (88%)
 Strand = Plus / Minus

                                                                
Query: 369  gatggctttcaccgtttgagggcatgaatccgtgatccagaagtaagcaaac 420
            |||||| || ||||| || || || |||||||||||||||||||||||||||
Sbjct: 1020 gatggccttaaccgtctgtggacaagaatccgtgatccagaagtaagcaaac 969
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>gb|AY128402.1| Arabidopsis thaliana putative ribose phosphate pyrophosphokinase
           (At2g42910) mRNA, complete cds
          Length = 1230

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 46/52 (88%)
 Strand = Plus / Minus

                                                               
Query: 369 gatggctttcaccgtttgagggcatgaatccgtgatccagaagtaagcaaac 420
           |||||| || ||||| || || || |||||||||||||||||||||||||||
Sbjct: 992 gatggccttaaccgtctgtggacaagaatccgtgatccagaagtaagcaaac 941
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>gb|AC006931.6| Arabidopsis thaliana chromosome 2 clone F7D19 map m551, complete
             sequence
          Length = 115310

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 46/52 (88%)
 Strand = Plus / Plus

                                                                 
Query: 369   gatggctttcaccgtttgagggcatgaatccgtgatccagaagtaagcaaac 420
             |||||| || ||||| || || || |||||||||||||||||||||||||||
Sbjct: 23418 gatggccttaaccgtctgtggacaagaatccgtgatccagaagtaagcaaac 23469
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>gb|AC006580.4| Arabidopsis thaliana chromosome 2 clone F23E6 map m551, complete
             sequence
          Length = 34842

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 46/52 (88%)
 Strand = Plus / Plus

                                                                 
Query: 369   gatggctttcaccgtttgagggcatgaatccgtgatccagaagtaagcaaac 420
             |||||| || ||||| || || || |||||||||||||||||||||||||||
Sbjct: 26818 gatggccttaaccgtctgtggacaagaatccgtgatccagaagtaagcaaac 26869
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>emb|BX819240.1|CNS0A8XX Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTFB5ZC07 of Flowers and buds of strain col-0 of
            Arabidopsis thaliana (thale cress)
          Length = 1267

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 46/52 (88%)
 Strand = Plus / Minus

                                                                
Query: 369  gatggctttcaccgtttgagggcatgaatccgtgatccagaagtaagcaaac 420
            |||||| || ||||| || || || |||||||||||||||||||||||||||
Sbjct: 1063 gatggccttaaccgtctgtggacaagaatccgtgatccagaagtaagcaaac 1012
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>gb|AY087406.1| Arabidopsis thaliana clone 35051 mRNA, complete sequence
          Length = 1316

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 46/52 (88%)
 Strand = Plus / Minus

                                                                
Query: 369  gatggctttcaccgtttgagggcatgaatccgtgatccagaagtaagcaaac 420
            |||||| || ||||| || || || |||||||||||||||||||||||||||
Sbjct: 1076 gatggccttaaccgtctgtggacaagaatccgtgatccagaagtaagcaaac 1025
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>dbj|AK175962.1| Arabidopsis thaliana mRNA for putative ribose phosphate
           pyrophosphokinase, partial cds, clone: RAFL22-65-J06
          Length = 466

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 46/52 (88%)
 Strand = Plus / Minus

                                                               
Query: 369 gatggctttcaccgtttgagggcatgaatccgtgatccagaagtaagcaaac 420
           |||||| || ||||| || || || |||||||||||||||||||||||||||
Sbjct: 215 gatggccttaaccgtctgtggacaagaatccgtgatccagaagtaagcaaac 164
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>emb|BX820312.1|CNS0A8NI Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH21ZC12 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1203

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 27/27 (100%)
 Strand = Plus / Minus

                                      
Query: 394 gaatccgtgatccagaagtaagcaaac 420
           |||||||||||||||||||||||||||
Sbjct: 957 gaatccgtgatccagaagtaagcaaac 931
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>emb|BX820243.1|CNS0A8KF Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTPGH11ZG11 of Hormone Treated Callus of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1259

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 27/27 (100%)
 Strand = Plus / Minus

                                       
Query: 394  gaatccgtgatccagaagtaagcaaac 420
            |||||||||||||||||||||||||||
Sbjct: 1011 gaatccgtgatccagaagtaagcaaac 985
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>dbj|AP004918.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT13I21, TM0076a,
             complete sequence
          Length = 71794

 Score = 48.1 bits (24), Expect = 0.027
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                         
Query: 388   gggcatgaatccgtgatccagaagtaag 415
             ||||||||||| ||||||||||||||||
Sbjct: 45272 gggcatgaatctgtgatccagaagtaag 45245
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>emb|AJ006943.1|SOL6943 Spinacia oleracea mRNA for phosphoribosyl pyrophosphate synthase,
            isozyme 4
          Length = 1650

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                       
Query: 394  gaatccgtgatccagaagtaagcaaac 420
            |||||||||||||||||||||| ||||
Sbjct: 1343 gaatccgtgatccagaagtaagtaaac 1317
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>gb|AC010967.3| Homo sapiens BAC clone RP11-7H13 from 2, complete sequence
          Length = 197328

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 289   ttcacagtccatgttcatatct 310
             ||||||||||||||||||||||
Sbjct: 53764 ttcacagtccatgttcatatct 53743
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>gb|AC093198.3| Drosophila melanogaster clone BACR03G24, complete sequence
          Length = 182901

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 17    aaacctgacctacaatttcaa 37
             |||||||||||||||||||||
Sbjct: 66721 aaacctgacctacaatttcaa 66701
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>gb|AC006402.12| Drosophila melanogaster clone BACR08D17, complete sequence
          Length = 174735

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 17   aaacctgacctacaatttcaa 37
            |||||||||||||||||||||
Sbjct: 5431 aaacctgacctacaatttcaa 5411
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>emb|BX469901.13| Zebrafish DNA sequence from clone CH211-150E8 in linkage group 8,
              complete sequence
          Length = 180553

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 245    tgctggagctggaaatgtaag 265
              |||||||||||||||||||||
Sbjct: 113215 tgctggagctggaaatgtaag 113195
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>gb|AC090415.5| Homo sapiens chromosome 18, clone RP11-529J17, complete sequence
          Length = 155847

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 68     tcatgccatgtcaggaaatta 88
              |||||||||||||||||||||
Sbjct: 137644 tcatgccatgtcaggaaatta 137624
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>gb|AC091691.7| Homo sapiens chromosome 18, clone RP11-47G4, complete sequence
          Length = 164314

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 68    tcatgccatgtcaggaaatta 88
             |||||||||||||||||||||
Sbjct: 46240 tcatgccatgtcaggaaatta 46220
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>gb|AC092642.2| Homo sapiens BAC clone RP11-391P1 from 2, complete sequence
          Length = 152251

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 276   aggagcagcccatttcacagt 296
             |||||||||||||||||||||
Sbjct: 90298 aggagcagcccatttcacagt 90278
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>gb|AE003666.6| Drosophila melanogaster chromosome 2L, section 75 of 83 of the complete
              sequence
          Length = 318277

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 17     aaacctgacctacaatttcaa 37
              |||||||||||||||||||||
Sbjct: 212448 aaacctgacctacaatttcaa 212428
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>gb|AC002503.1|AC002503 Drosophila melanogaster (P1 DS05187 (D54)) DNA sequence, complete
             sequence
          Length = 78938

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 17    aaacctgacctacaatttcaa 37
             |||||||||||||||||||||
Sbjct: 70958 aaacctgacctacaatttcaa 70938
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>gb|AC110222.9| Mus musculus chromosome 3, clone RP24-211P23, complete sequence
          Length = 179958

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 360    ttgttggctgatggctttca 379
              ||||||||||||||||||||
Sbjct: 166550 ttgttggctgatggctttca 166569
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>gb|AC166939.2| Mus musculus BAC clone RP23-72K19 from chromosome 8, complete sequence
          Length = 236510

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 422    ggtcacctggctcagcagaa 441
              ||||||||||||||||||||
Sbjct: 226153 ggtcacctggctcagcagaa 226134
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>gb|AC122890.4| Mus musculus BAC clone RP23-63O14 from 8, complete sequence
          Length = 209359

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 422   ggtcacctggctcagcagaa 441
             ||||||||||||||||||||
Sbjct: 88546 ggtcacctggctcagcagaa 88527
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>gb|AC026702.6| Homo sapiens chromosome 5 clone CTC-575I10, complete sequence
          Length = 148737

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 187    gaaaagcttcagactcgacacaat 210
              ||||||||||||||| ||||||||
Sbjct: 136364 gaaaagcttcagactagacacaat 136341
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>gb|AC008387.6| Homo sapiens chromosome 5 clone CTC-229P9, complete sequence
          Length = 142715

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 187   gaaaagcttcagactcgacacaat 210
             ||||||||||||||| ||||||||
Sbjct: 93467 gaaaagcttcagactagacacaat 93490
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 152     tgccttgttttattatcaaa 171
               ||||||||||||||||||||
Sbjct: 1892420 tgccttgttttattatcaaa 1892401
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>dbj|AP003214.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:OSJNBa0083M16
          Length = 179428

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 152    tgccttgttttattatcaaa 171
              ||||||||||||||||||||
Sbjct: 133802 tgccttgttttattatcaaa 133783


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,179,910
Number of Sequences: 3902068
Number of extensions: 4179910
Number of successful extensions: 71839
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 71715
Number of HSP's gapped (non-prelim): 121
length of query: 491
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 469
effective length of database: 17,147,199,772
effective search space: 8042036693068
effective search space used: 8042036693068
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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