ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart23c10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_478718.1| Oryza sativa (japonica cultivar-group), mRNA 278 1e-71
2dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 278 1e-71
3dbj|AP005195.3| Oryza sativa (japonica cultivar-group) genomic D... 278 1e-71
4dbj|AP004270.3| Oryza sativa (japonica cultivar-group) genomic D... 278 1e-71
5dbj|AK108426.1| Oryza sativa (japonica cultivar-group) cDNA clon... 270 3e-69
6ref|XM_478722.1| Oryza sativa (japonica cultivar-group), mRNA 214 2e-52
7dbj|AK111334.1| Oryza sativa (japonica cultivar-group) cDNA clon... 204 2e-49
8ref|XM_478725.1| Oryza sativa (japonica cultivar-group), mRNA 202 6e-49
9dbj|AK072020.1| Oryza sativa (japonica cultivar-group) cDNA clon... 202 6e-49
10ref|NM_183863.1| Oryza sativa (japonica cultivar-group), predic... 139 8e-30
11dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 139 8e-30
12dbj|AP003143.2| Oryza sativa (japonica cultivar-group) genomic D... 139 8e-30
13dbj|AP002869.1| Oryza sativa (japonica cultivar-group) genomic D... 139 8e-30
14gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, comple... 44 0.35
15gb|AY738474.1| Gemmata sp. Wa1-1 WD-repeat protein gene, complet... 44 0.35
16gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome 42 1.4
17gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome 42 1.4
18emb|AL611987.16| Mouse DNA sequence from clone RP23-320B4 on chr... 42 1.4
19ref|XM_481091.1| Oryza sativa (japonica cultivar-group), mRNA 40 5.4
20ref|XM_467889.1| Oryza sativa (japonica cultivar-group), mRNA 40 5.4
21ref|XM_467888.1| Oryza sativa (japonica cultivar-group), mRNA 40 5.4
22ref|XM_472244.1| Oryza sativa (japonica cultivar-group), predic... 40 5.4
23ref|XM_955508.1| Neurospora crassa OR74A hypothetical protein (N... 40 5.4
24ref|XM_331256.1| Neurospora crassa OR74A hypothetical protein (N... 40 5.4
25gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete ge... 40 5.4
26gb|CP000353.1| Ralstonia metallidurans CH34 megaplasmid, complet... 40 5.4
27emb|AL939128.1|SCO939128 Streptomyces coelicolor A3(2) complete ... 40 5.4
28emb|AL670004.1|NC5E6 Neurospora crassa DNA linkage group V Cosmi... 40 5.4
29gb|AC010191.24| Homo sapiens 12 BAC RP11-443B14 (Roswell Park Ca... 40 5.4
30gb|CP000249.1| Frankia sp. CcI3, complete genome 40 5.4
31dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.4
32dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.4
33dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.4
34dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.4
35emb|AL662977.3|OSJN00176 Oryza sativa genomic DNA, chromosome 4,... 40 5.4
36dbj|AP005679.2| Oryza sativa (japonica cultivar-group) genomic D... 40 5.4
37dbj|AP004814.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.4
38dbj|AP005095.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.4
39ref|XM_310665.2| Anopheles gambiae str. PEST ENSANGP00000020753 ... 40 5.4
40dbj|AK108529.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.4
41dbj|AK071146.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.4
42dbj|AK061269.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.4
43emb|AM087403.1| Streptomyces venezuelae pSVH1 plasmid 40 5.4
44gb|AY109465.1| Zea mays CL6587_1 mRNA sequence 40 5.4
45emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome 40 5.4
46gb|L23209.1|MZECP450A Zea mays cytochrome P-450 (cyp78) mRNA, co... 40 5.4 
>ref|XM_478718.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1599

 Score =  278 bits (140), Expect = 1e-71
 Identities = 239/272 (87%)
 Strand = Plus / Minus

                                                                        
Query: 132  gcctccttgtgctcctcctcgtccatggtgtccgacatgccctttccccgcgtctccggc 191
            |||||||||||||||||||| ||||||||||||||||||| | | |||| ||||||||||
Sbjct: 1553 gcctccttgtgctcctcctcctccatggtgtccgacatgctcctccccctcgtctccggc 1494

                                                                        
Query: 192  aggcaggctgcgaacatgccgaagcagccgacgacgagcccgaacacgccgaacgacaaa 251
            |||||| | |||||||  |||| |||||||||| ||||||||||||| ||||||||| | 
Sbjct: 1493 aggcagacggcgaacagcccgaggcagccgacggcgagcccgaacaccccgaacgaccag 1434

                                                                        
Query: 252  aagctcctctcgcggcccagcgcgacgagcaccggcgccgccacgcctcccagcaccagc 311
            ||||||| ||| ||||| ||||| |||||||  |||||||||||||| || ||||| |||
Sbjct: 1433 aagctccgctcccggccgagcgccacgagcatgggcgccgccacgccgccgagcacgagc 1374

                                                                        
Query: 312  gcctgccttaccagccccaccgccgagtttcgcacggacgtcgggaacagctcgatggag 371
            ||||| |  |||| ||||||||||||||| ||||| ||||||||||||||||||||||||
Sbjct: 1373 gcctggcgcaccatccccaccgccgagttgcgcaccgacgtcgggaacagctcgatggag 1314

                                            
Query: 372  tacatcataatgacgttgaacgccgtgcacgt 403
            ||||| |  |||| ||||||||||||||||||
Sbjct: 1313 tacatgaggatgatgttgaacgccgtgcacgt 1282
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score =  278 bits (140), Expect = 1e-71
 Identities = 239/272 (87%)
 Strand = Plus / Minus

                                                                            
Query: 132      gcctccttgtgctcctcctcgtccatggtgtccgacatgccctttccccgcgtctccggc 191
                |||||||||||||||||||| ||||||||||||||||||| | | |||| ||||||||||
Sbjct: 22374900 gcctccttgtgctcctcctcctccatggtgtccgacatgctcctccccctcgtctccggc 22374841

                                                                            
Query: 192      aggcaggctgcgaacatgccgaagcagccgacgacgagcccgaacacgccgaacgacaaa 251
                |||||| | |||||||  |||| |||||||||| ||||||||||||| ||||||||| | 
Sbjct: 22374840 aggcagacggcgaacagcccgaggcagccgacggcgagcccgaacaccccgaacgaccag 22374781

                                                                            
Query: 252      aagctcctctcgcggcccagcgcgacgagcaccggcgccgccacgcctcccagcaccagc 311
                ||||||| ||| ||||| ||||| |||||||  |||||||||||||| || ||||| |||
Sbjct: 22374780 aagctccgctcccggccgagcgccacgagcatgggcgccgccacgccgccgagcacgagc 22374721

                                                                            
Query: 312      gcctgccttaccagccccaccgccgagtttcgcacggacgtcgggaacagctcgatggag 371
                ||||| |  |||| ||||||||||||||| ||||| ||||||||||||||||||||||||
Sbjct: 22374720 gcctggcgcaccatccccaccgccgagttgcgcaccgacgtcgggaacagctcgatggag 22374661

                                                
Query: 372      tacatcataatgacgttgaacgccgtgcacgt 403
                ||||| |  |||| ||||||||||||||||||
Sbjct: 22374660 tacatgaggatgatgttgaacgccgtgcacgt 22374629



 Score =  214 bits (108), Expect = 2e-52
 Identities = 222/260 (85%)
 Strand = Plus / Plus

                                                                            
Query: 143      ctcctcctcgtccatggtgtccgacatgccctttccccgcgtctccggcaggcaggctgc 202
                ||||||||| ||||||||||||||||  | | | |||  |||||||||||| ||||   |
Sbjct: 22403406 ctcctcctcctccatggtgtccgacaacctcctccccttcgtctccggcagccaggtgac 22403465

                                                                            
Query: 203      gaacatgccgaagcagccgacgacgagcccgaacacgccgaacgacaaaaagctcctctc 262
                |||||  |||| |||||||||| ||||||||||||||||||||||| |  ||||||||||
Sbjct: 22403466 gaacagcccgaggcagccgacggcgagcccgaacacgccgaacgaccagtagctcctctc 22403525

                                                                            
Query: 263      gcggcccagcgcgacgagcaccggcgccgccacgcctcccagcaccagcgcctgccttac 322
                |||||| |||||||||||||  |||||| ||||||| |||||||||  |||||  |  ||
Sbjct: 22403526 gcggccgagcgcgacgagcatgggcgccaccacgccgcccagcaccgccgcctttcgcac 22403585

                                                                            
Query: 323      cagccccaccgccgagtttcgcacggacgtcgggaacagctcgatggagtacatcataat 382
                |||||||||||||||||| ||||| ||||||||||||||||||||||||||||| |  ||
Sbjct: 22403586 cagccccaccgccgagttgcgcaccgacgtcgggaacagctcgatggagtacatgagcat 22403645

                                    
Query: 383      gacgttgaacgccgtgcacg 402
                 |||| |||||||| |||||
Sbjct: 22403646 cacgtcgaacgccgcgcacg 22403665



 Score =  202 bits (102), Expect = 6e-49
 Identities = 201/234 (85%)
 Strand = Plus / Minus

                                                                            
Query: 143      ctcctcctcgtccatggtgtccgacatgccctttccccgcgtctccggcaggcaggctgc 202
                |||||| || ||||||||||||||||  | | | |||  ||||||||||||| |||   |
Sbjct: 22422612 ctcctcatcctccatggtgtccgacaacctcctccccttcgtctccggcaggaaggtgac 22422553

                                                                            
Query: 203      gaacatgccgaagcagccgacgacgagcccgaacacgccgaacgacaaaaagctcctctc 262
                |||||  |||| ||||||||||  |||||||||||||||||||||| |  ||||||||||
Sbjct: 22422552 gaacagcccgaggcagccgacggtgagcccgaacacgccgaacgaccagtagctcctctc 22422493

                                                                            
Query: 263      gcggcccagcgcgacgagcaccggcgccgccacgcctcccagcaccagcgcctgccttac 322
                |||||| |||||||||||||  |||||| ||||||| |||||||||  ||||||||  ||
Sbjct: 22422492 gcggccgagcgcgacgagcatgggcgccaccacgccgcccagcacccccgcctgccgcac 22422433

                                                                      
Query: 323      cagccccaccgccgagtttcgcacggacgtcgggaacagctcgatggagtacat 376
                |||||||||||||||||| ||||| |||||||||||||||||||| ||||||||
Sbjct: 22422432 cagccccaccgccgagttgcgcaccgacgtcgggaacagctcgatcgagtacat 22422379
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>dbj|AP005195.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0567H04
          Length = 181420

 Score =  278 bits (140), Expect = 1e-71
 Identities = 239/272 (87%)
 Strand = Plus / Minus

                                                                          
Query: 132    gcctccttgtgctcctcctcgtccatggtgtccgacatgccctttccccgcgtctccggc 191
              |||||||||||||||||||| ||||||||||||||||||| | | |||| ||||||||||
Sbjct: 180146 gcctccttgtgctcctcctcctccatggtgtccgacatgctcctccccctcgtctccggc 180087

                                                                          
Query: 192    aggcaggctgcgaacatgccgaagcagccgacgacgagcccgaacacgccgaacgacaaa 251
              |||||| | |||||||  |||| |||||||||| ||||||||||||| ||||||||| | 
Sbjct: 180086 aggcagacggcgaacagcccgaggcagccgacggcgagcccgaacaccccgaacgaccag 180027

                                                                          
Query: 252    aagctcctctcgcggcccagcgcgacgagcaccggcgccgccacgcctcccagcaccagc 311
              ||||||| ||| ||||| ||||| |||||||  |||||||||||||| || ||||| |||
Sbjct: 180026 aagctccgctcccggccgagcgccacgagcatgggcgccgccacgccgccgagcacgagc 179967

                                                                          
Query: 312    gcctgccttaccagccccaccgccgagtttcgcacggacgtcgggaacagctcgatggag 371
              ||||| |  |||| ||||||||||||||| ||||| ||||||||||||||||||||||||
Sbjct: 179966 gcctggcgcaccatccccaccgccgagttgcgcaccgacgtcgggaacagctcgatggag 179907

                                              
Query: 372    tacatcataatgacgttgaacgccgtgcacgt 403
              ||||| |  |||| ||||||||||||||||||
Sbjct: 179906 tacatgaggatgatgttgaacgccgtgcacgt 179875
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>dbj|AP004270.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0406F06
          Length = 144533

 Score =  278 bits (140), Expect = 1e-71
 Identities = 239/272 (87%)
 Strand = Plus / Minus

                                                                         
Query: 132   gcctccttgtgctcctcctcgtccatggtgtccgacatgccctttccccgcgtctccggc 191
             |||||||||||||||||||| ||||||||||||||||||| | | |||| ||||||||||
Sbjct: 35967 gcctccttgtgctcctcctcctccatggtgtccgacatgctcctccccctcgtctccggc 35908

                                                                         
Query: 192   aggcaggctgcgaacatgccgaagcagccgacgacgagcccgaacacgccgaacgacaaa 251
             |||||| | |||||||  |||| |||||||||| ||||||||||||| ||||||||| | 
Sbjct: 35907 aggcagacggcgaacagcccgaggcagccgacggcgagcccgaacaccccgaacgaccag 35848

                                                                         
Query: 252   aagctcctctcgcggcccagcgcgacgagcaccggcgccgccacgcctcccagcaccagc 311
             ||||||| ||| ||||| ||||| |||||||  |||||||||||||| || ||||| |||
Sbjct: 35847 aagctccgctcccggccgagcgccacgagcatgggcgccgccacgccgccgagcacgagc 35788

                                                                         
Query: 312   gcctgccttaccagccccaccgccgagtttcgcacggacgtcgggaacagctcgatggag 371
             ||||| |  |||| ||||||||||||||| ||||| ||||||||||||||||||||||||
Sbjct: 35787 gcctggcgcaccatccccaccgccgagttgcgcaccgacgtcgggaacagctcgatggag 35728

                                             
Query: 372   tacatcataatgacgttgaacgccgtgcacgt 403
             ||||| |  |||| ||||||||||||||||||
Sbjct: 35727 tacatgaggatgatgttgaacgccgtgcacgt 35696



 Score =  214 bits (108), Expect = 2e-52
 Identities = 222/260 (85%)
 Strand = Plus / Plus

                                                                         
Query: 143   ctcctcctcgtccatggtgtccgacatgccctttccccgcgtctccggcaggcaggctgc 202
             ||||||||| ||||||||||||||||  | | | |||  |||||||||||| ||||   |
Sbjct: 64473 ctcctcctcctccatggtgtccgacaacctcctccccttcgtctccggcagccaggtgac 64532

                                                                         
Query: 203   gaacatgccgaagcagccgacgacgagcccgaacacgccgaacgacaaaaagctcctctc 262
             |||||  |||| |||||||||| ||||||||||||||||||||||| |  ||||||||||
Sbjct: 64533 gaacagcccgaggcagccgacggcgagcccgaacacgccgaacgaccagtagctcctctc 64592

                                                                         
Query: 263   gcggcccagcgcgacgagcaccggcgccgccacgcctcccagcaccagcgcctgccttac 322
             |||||| |||||||||||||  |||||| ||||||| |||||||||  |||||  |  ||
Sbjct: 64593 gcggccgagcgcgacgagcatgggcgccaccacgccgcccagcaccgccgcctttcgcac 64652

                                                                         
Query: 323   cagccccaccgccgagtttcgcacggacgtcgggaacagctcgatggagtacatcataat 382
             |||||||||||||||||| ||||| ||||||||||||||||||||||||||||| |  ||
Sbjct: 64653 cagccccaccgccgagttgcgcaccgacgtcgggaacagctcgatggagtacatgagcat 64712

                                 
Query: 383   gacgttgaacgccgtgcacg 402
              |||| |||||||| |||||
Sbjct: 64713 cacgtcgaacgccgcgcacg 64732



 Score =  202 bits (102), Expect = 6e-49
 Identities = 201/234 (85%)
 Strand = Plus / Minus

                                                                         
Query: 143   ctcctcctcgtccatggtgtccgacatgccctttccccgcgtctccggcaggcaggctgc 202
             |||||| || ||||||||||||||||  | | | |||  ||||||||||||| |||   |
Sbjct: 83679 ctcctcatcctccatggtgtccgacaacctcctccccttcgtctccggcaggaaggtgac 83620

                                                                         
Query: 203   gaacatgccgaagcagccgacgacgagcccgaacacgccgaacgacaaaaagctcctctc 262
             |||||  |||| ||||||||||  |||||||||||||||||||||| |  ||||||||||
Sbjct: 83619 gaacagcccgaggcagccgacggtgagcccgaacacgccgaacgaccagtagctcctctc 83560

                                                                         
Query: 263   gcggcccagcgcgacgagcaccggcgccgccacgcctcccagcaccagcgcctgccttac 322
             |||||| |||||||||||||  |||||| ||||||| |||||||||  ||||||||  ||
Sbjct: 83559 gcggccgagcgcgacgagcatgggcgccaccacgccgcccagcacccccgcctgccgcac 83500

                                                                   
Query: 323   cagccccaccgccgagtttcgcacggacgtcgggaacagctcgatggagtacat 376
             |||||||||||||||||| ||||| |||||||||||||||||||| ||||||||
Sbjct: 83499 cagccccaccgccgagttgcgcaccgacgtcgggaacagctcgatcgagtacat 83446
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>dbj|AK108426.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-143-A07, full
           insert sequence
          Length = 989

 Score =  270 bits (136), Expect = 3e-69
 Identities = 238/272 (87%)
 Strand = Plus / Minus

                                                                       
Query: 132 gcctccttgtgctcctcctcgtccatggtgtccgacatgccctttccccgcgtctccggc 191
           |||||||||||||||||||| ||||||||||||||||||| | | |||| ||||||||||
Sbjct: 819 gcctccttgtgctcctcctcctccatggtgtccgacatgctcctccccctcgtctccggc 760

                                                                       
Query: 192 aggcaggctgcgaacatgccgaagcagccgacgacgagcccgaacacgccgaacgacaaa 251
           |||||| | || ||||  |||| |||||||||| ||||||||||||| ||||||||| | 
Sbjct: 759 aggcagacggccaacagcccgaggcagccgacggcgagcccgaacaccccgaacgaccag 700

                                                                       
Query: 252 aagctcctctcgcggcccagcgcgacgagcaccggcgccgccacgcctcccagcaccagc 311
           ||||||| ||| ||||| ||||| |||||||  |||||||||||||| || ||||| |||
Sbjct: 699 aagctccgctcccggccgagcgccacgagcatgggcgccgccacgccgccgagcacgagc 640

                                                                       
Query: 312 gcctgccttaccagccccaccgccgagtttcgcacggacgtcgggaacagctcgatggag 371
           ||||| |  |||| ||||||||||||||| ||||| ||||||||||||||||||||||||
Sbjct: 639 gcctggcgcaccatccccaccgccgagttgcgcaccgacgtcgggaacagctcgatggag 580

                                           
Query: 372 tacatcataatgacgttgaacgccgtgcacgt 403
           ||||| |  |||| ||||||||||||||||||
Sbjct: 579 tacatgaggatgatgttgaacgccgtgcacgt 548
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>ref|XM_478722.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1614

 Score =  214 bits (108), Expect = 2e-52
 Identities = 222/260 (85%)
 Strand = Plus / Minus

                                                                        
Query: 143  ctcctcctcgtccatggtgtccgacatgccctttccccgcgtctccggcaggcaggctgc 202
            ||||||||| ||||||||||||||||  | | | |||  |||||||||||| ||||   |
Sbjct: 1545 ctcctcctcctccatggtgtccgacaacctcctccccttcgtctccggcagccaggtgac 1486

                                                                        
Query: 203  gaacatgccgaagcagccgacgacgagcccgaacacgccgaacgacaaaaagctcctctc 262
            |||||  |||| |||||||||| ||||||||||||||||||||||| |  ||||||||||
Sbjct: 1485 gaacagcccgaggcagccgacggcgagcccgaacacgccgaacgaccagtagctcctctc 1426

                                                                        
Query: 263  gcggcccagcgcgacgagcaccggcgccgccacgcctcccagcaccagcgcctgccttac 322
            |||||| |||||||||||||  |||||| ||||||| |||||||||  |||||  |  ||
Sbjct: 1425 gcggccgagcgcgacgagcatgggcgccaccacgccgcccagcaccgccgcctttcgcac 1366

                                                                        
Query: 323  cagccccaccgccgagtttcgcacggacgtcgggaacagctcgatggagtacatcataat 382
            |||||||||||||||||| ||||| ||||||||||||||||||||||||||||| |  ||
Sbjct: 1365 cagccccaccgccgagttgcgcaccgacgtcgggaacagctcgatggagtacatgagcat 1306

                                
Query: 383  gacgttgaacgccgtgcacg 402
             |||| |||||||| |||||
Sbjct: 1305 cacgtcgaacgccgcgcacg 1286
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>dbj|AK111334.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-181-E11, full
           insert sequence
          Length = 1376

 Score =  204 bits (103), Expect = 2e-49
 Identities = 187/215 (86%)
 Strand = Plus / Minus

                                                                       
Query: 132 gcctccttgtgctcctcctcgtccatggtgtccgacatgccctttccccgcgtctccggc 191
           |||||||||||||||||||| ||||||||||||||||||| | | |||| ||||||||||
Sbjct: 217 gcctccttgtgctcctcctcctccatggtgtccgacatgctcctccccctcgtctccggc 158

                                                                       
Query: 192 aggcaggctgcgaacatgccgaagcagccgacgacgagcccgaacacgccgaacgacaaa 251
           |||||| | |||||||  |||| |||||||||| ||||||||||||| ||||||||| | 
Sbjct: 157 aggcagacggcgaacagcccgaggcagccgacggcgagcccgaacaccccgaacgaccag 98

                                                                       
Query: 252 aagctcctctcgcggcccagcgcgacgagcaccggcgccgccacgcctcccagcaccagc 311
           ||||||| ||| ||||| ||||| |||||||  |||||||||||||| || ||||| |||
Sbjct: 97  aagctccgctcccggccgagcgccacgagcatgggcgccgccacgccgccgagcacgagc 38

                                              
Query: 312 gcctgccttaccagccccaccgccgagtttcgcac 346
           ||||| |  |||| ||||||||||||||| |||||
Sbjct: 37  gcctggcgcaccatccccaccgccgagttgcgcac 3
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>ref|XM_478725.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1807

 Score =  202 bits (102), Expect = 6e-49
 Identities = 201/234 (85%)
 Strand = Plus / Minus

                                                                        
Query: 143  ctcctcctcgtccatggtgtccgacatgccctttccccgcgtctccggcaggcaggctgc 202
            |||||| || ||||||||||||||||  | | | |||  ||||||||||||| |||   |
Sbjct: 1633 ctcctcatcctccatggtgtccgacaacctcctccccttcgtctccggcaggaaggtgac 1574

                                                                        
Query: 203  gaacatgccgaagcagccgacgacgagcccgaacacgccgaacgacaaaaagctcctctc 262
            |||||  |||| ||||||||||  |||||||||||||||||||||| |  ||||||||||
Sbjct: 1573 gaacagcccgaggcagccgacggtgagcccgaacacgccgaacgaccagtagctcctctc 1514

                                                                        
Query: 263  gcggcccagcgcgacgagcaccggcgccgccacgcctcccagcaccagcgcctgccttac 322
            |||||| |||||||||||||  |||||| ||||||| |||||||||  ||||||||  ||
Sbjct: 1513 gcggccgagcgcgacgagcatgggcgccaccacgccgcccagcacccccgcctgccgcac 1454

                                                                  
Query: 323  cagccccaccgccgagtttcgcacggacgtcgggaacagctcgatggagtacat 376
            |||||||||||||||||| ||||| |||||||||||||||||||| ||||||||
Sbjct: 1453 cagccccaccgccgagttgcgcaccgacgtcgggaacagctcgatcgagtacat 1400
to top
>dbj|AK072020.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013104C21, full
            insert sequence
          Length = 1807

 Score =  202 bits (102), Expect = 6e-49
 Identities = 201/234 (85%)
 Strand = Plus / Minus

                                                                        
Query: 143  ctcctcctcgtccatggtgtccgacatgccctttccccgcgtctccggcaggcaggctgc 202
            |||||| || ||||||||||||||||  | | | |||  ||||||||||||| |||   |
Sbjct: 1633 ctcctcatcctccatggtgtccgacaacctcctccccttcgtctccggcaggaaggtgac 1574

                                                                        
Query: 203  gaacatgccgaagcagccgacgacgagcccgaacacgccgaacgacaaaaagctcctctc 262
            |||||  |||| ||||||||||  |||||||||||||||||||||| |  ||||||||||
Sbjct: 1573 gaacagcccgaggcagccgacggtgagcccgaacacgccgaacgaccagtagctcctctc 1514

                                                                        
Query: 263  gcggcccagcgcgacgagcaccggcgccgccacgcctcccagcaccagcgcctgccttac 322
            |||||| |||||||||||||  |||||| ||||||| |||||||||  ||||||||  ||
Sbjct: 1513 gcggccgagcgcgacgagcatgggcgccaccacgccgcccagcacccccgcctgccgcac 1454

                                                                  
Query: 323  cagccccaccgccgagtttcgcacggacgtcgggaacagctcgatggagtacat 376
            |||||||||||||||||| ||||| |||||||||||||||||||| ||||||||
Sbjct: 1453 cagccccaccgccgagttgcgcaccgacgtcgggaacagctcgatcgagtacat 1400
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>ref|NM_183863.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1626

 Score =  139 bits (70), Expect = 8e-30
 Identities = 106/118 (89%)
 Strand = Plus / Minus

                                                                        
Query: 259  tctcgcggcccagcgcgacgagcaccggcgccgccacgcctcccagcaccagcgcctgcc 318
            |||||||||| |||||||||||||| || ||| ||||||| |||||| ||| ||||||||
Sbjct: 1441 tctcgcggccgagcgcgacgagcacgggagccaccacgccgcccagcgccaccgcctgcc 1382

                                                                      
Query: 319  ttaccagccccaccgccgagtttcgcacggacgtcgggaacagctcgatggagtacat 376
              |||||||||||||||||||| ||||| |||||||||||||||||||||| ||||||
Sbjct: 1381 gcaccagccccaccgccgagttgcgcaccgacgtcgggaacagctcgatggtgtacat 1324



 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 91/106 (85%)
 Strand = Plus / Minus

                                                                        
Query: 143  ctcctcctcgtccatggtgtccgacatgccctttccccgcgtctccggcaggcaggctgc 202
            ||||||||| ||||||||||||||||  | | | |||| |||||||||||||||||   |
Sbjct: 1566 ctcctcctcctccatggtgtccgacaacctcctccccctcgtctccggcaggcaggtgac 1507

                                                          
Query: 203  gaacatgccgaagcagccgacgacgagcccgaacacgccgaacgac 248
             ||||  |||| |||||||||| |||||||||||||||||||||||
Sbjct: 1506 taacagcccgaggcagccgacggcgagcccgaacacgccgaacgac 1461
to top
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  139 bits (70), Expect = 8e-30
 Identities = 106/118 (89%)
 Strand = Plus / Minus

                                                                            
Query: 259      tctcgcggcccagcgcgacgagcaccggcgccgccacgcctcccagcaccagcgcctgcc 318
                |||||||||| |||||||||||||| || ||| ||||||| |||||| ||| ||||||||
Sbjct: 12742837 tctcgcggccgagcgcgacgagcacgggagccaccacgccgcccagcgccaccgcctgcc 12742778

                                                                          
Query: 319      ttaccagccccaccgccgagtttcgcacggacgtcgggaacagctcgatggagtacat 376
                  |||||||||||||||||||| ||||| |||||||||||||||||||||| ||||||
Sbjct: 12742777 gcaccagccccaccgccgagttgcgcaccgacgtcgggaacagctcgatggtgtacat 12742720



 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 91/106 (85%)
 Strand = Plus / Minus

                                                                            
Query: 143      ctcctcctcgtccatggtgtccgacatgccctttccccgcgtctccggcaggcaggctgc 202
                ||||||||| ||||||||||||||||  | | | |||| |||||||||||||||||   |
Sbjct: 12742962 ctcctcctcctccatggtgtccgacaacctcctccccctcgtctccggcaggcaggtgac 12742903

                                                              
Query: 203      gaacatgccgaagcagccgacgacgagcccgaacacgccgaacgac 248
                 ||||  |||| |||||||||| |||||||||||||||||||||||
Sbjct: 12742902 taacagcccgaggcagccgacggcgagcccgaacacgccgaacgac 12742857
to top
>dbj|AP003143.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0489E06
          Length = 140229

 Score =  139 bits (70), Expect = 8e-30
 Identities = 106/118 (89%)
 Strand = Plus / Minus

                                                                         
Query: 259   tctcgcggcccagcgcgacgagcaccggcgccgccacgcctcccagcaccagcgcctgcc 318
             |||||||||| |||||||||||||| || ||| ||||||| |||||| ||| ||||||||
Sbjct: 23236 tctcgcggccgagcgcgacgagcacgggagccaccacgccgcccagcgccaccgcctgcc 23177

                                                                       
Query: 319   ttaccagccccaccgccgagtttcgcacggacgtcgggaacagctcgatggagtacat 376
               |||||||||||||||||||| ||||| |||||||||||||||||||||| ||||||
Sbjct: 23176 gcaccagccccaccgccgagttgcgcaccgacgtcgggaacagctcgatggtgtacat 23119



 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 91/106 (85%)
 Strand = Plus / Minus

                                                                         
Query: 143   ctcctcctcgtccatggtgtccgacatgccctttccccgcgtctccggcaggcaggctgc 202
             ||||||||| ||||||||||||||||  | | | |||| |||||||||||||||||   |
Sbjct: 23361 ctcctcctcctccatggtgtccgacaacctcctccccctcgtctccggcaggcaggtgac 23302

                                                           
Query: 203   gaacatgccgaagcagccgacgacgagcccgaacacgccgaacgac 248
              ||||  |||| |||||||||| |||||||||||||||||||||||
Sbjct: 23301 taacagcccgaggcagccgacggcgagcccgaacacgccgaacgac 23256
to top
>dbj|AP002869.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0554D10
          Length = 158723

 Score =  139 bits (70), Expect = 8e-30
 Identities = 106/118 (89%)
 Strand = Plus / Minus

                                                                          
Query: 259    tctcgcggcccagcgcgacgagcaccggcgccgccacgcctcccagcaccagcgcctgcc 318
              |||||||||| |||||||||||||| || ||| ||||||| |||||| ||| ||||||||
Sbjct: 109866 tctcgcggccgagcgcgacgagcacgggagccaccacgccgcccagcgccaccgcctgcc 109807

                                                                        
Query: 319    ttaccagccccaccgccgagtttcgcacggacgtcgggaacagctcgatggagtacat 376
                |||||||||||||||||||| ||||| |||||||||||||||||||||| ||||||
Sbjct: 109806 gcaccagccccaccgccgagttgcgcaccgacgtcgggaacagctcgatggtgtacat 109749



 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 91/106 (85%)
 Strand = Plus / Minus

                                                                          
Query: 143    ctcctcctcgtccatggtgtccgacatgccctttccccgcgtctccggcaggcaggctgc 202
              ||||||||| ||||||||||||||||  | | | |||| |||||||||||||||||   |
Sbjct: 109991 ctcctcctcctccatggtgtccgacaacctcctccccctcgtctccggcaggcaggtgac 109932

                                                            
Query: 203    gaacatgccgaagcagccgacgacgagcccgaacacgccgaacgac 248
               ||||  |||| |||||||||| |||||||||||||||||||||||
Sbjct: 109931 taacagcccgaggcagccgacggcgagcccgaacacgccgaacgac 109886
to top
>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome
          Length = 3561584

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 287    cgccgccacgcctcccagcaccagcg 312
              |||||||||||| |||||||||||||
Sbjct: 850585 cgccgccacgccgcccagcaccagcg 850560
to top
>gb|AY738474.1| Gemmata sp. Wa1-1 WD-repeat protein gene, complete cds
          Length = 1398

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 266 gcccagcgcgacgagcaccggc 287
           ||||||||||||||||||||||
Sbjct: 471 gcccagcgcgacgagcaccggc 450
to top
>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome
          Length = 3304561

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                            
Query: 218     gccgacgacgagcccgaacacgccgaacg 246
               ||||||||||||||||||| || ||||||
Sbjct: 1164539 gccgacgacgagcccgaactcggcgaacg 1164567
to top
>gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome
          Length = 3052398

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                            
Query: 277     cgagcaccggcgccgccacgcctcccagc 305
               |||||||| |||||||| |||||||||||
Sbjct: 2018365 cgagcaccagcgccgccgcgcctcccagc 2018393
to top
>emb|AL611987.16| Mouse DNA sequence from clone RP23-320B4 on chromosome 15, complete
             sequence
          Length = 81931

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 295   cgcctcccagcaccagcgcctgcct 319
             ||||||||||| |||||||||||||
Sbjct: 11272 cgcctcccagccccagcgcctgcct 11296
to top
>ref|XM_481091.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1090

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 221 gacgacgagcccgaacacgccgaa 244
           |||||||||| |||||||||||||
Sbjct: 318 gacgacgagcgcgaacacgccgaa 295
to top
>ref|XM_467889.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 963

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 140 gtgctcctcctcgtccatgg 159
           ||||||||||||||||||||
Sbjct: 63  gtgctcctcctcgtccatgg 44
to top
>ref|XM_467888.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1075

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 140 gtgctcctcctcgtccatgg 159
           ||||||||||||||||||||
Sbjct: 97  gtgctcctcctcgtccatgg 78
to top
>ref|XM_472244.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1152

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 282 accggcgccgccacgcctcc 301
           ||||||||||||||||||||
Sbjct: 941 accggcgccgccacgcctcc 922
to top
>ref|XM_955508.1| Neurospora crassa OR74A hypothetical protein (NCU08865.1) partial
           mRNA
          Length = 1215

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 275 gacgagcaccggcgccgccacgcc 298
           |||||||| |||||||||||||||
Sbjct: 402 gacgagcagcggcgccgccacgcc 425
to top
>ref|XM_331256.1| Neurospora crassa OR74A hypothetical protein (NCU08865.1) partial
           mRNA
          Length = 1215

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 275 gacgagcaccggcgccgccacgcc 298
           |||||||| |||||||||||||||
Sbjct: 402 gacgagcagcggcgccgccacgcc 425
to top
>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome
          Length = 3696649

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 269     cagcgcgacgagcaccggcg 288
               ||||||||||||||||||||
Sbjct: 2985343 cagcgcgacgagcaccggcg 2985362
to top
>gb|CP000353.1| Ralstonia metallidurans CH34 megaplasmid, complete sequence
          Length = 2580084

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                 
Query: 279   agcaccggcgccgccacgcctcccagcaccagcgcc 314
             ||||||| | |||||| ||| |||||||||||||||
Sbjct: 75873 agcaccgacaccgccaggccgcccagcaccagcgcc 75838
to top
>emb|AL939128.1|SCO939128 Streptomyces coelicolor A3(2) complete genome; segment 25/29
          Length = 296500

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 269    cagcgcgacgagcaccggcg 288
              ||||||||||||||||||||
Sbjct: 211798 cagcgcgacgagcaccggcg 211779
to top
>emb|AL670004.1|NC5E6 Neurospora crassa DNA linkage group V Cosmid contig 5E6
          Length = 119882

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 275   gacgagcaccggcgccgccacgcc 298
             |||||||| |||||||||||||||
Sbjct: 32920 gacgagcagcggcgccgccacgcc 32897
to top
>gb|AC010191.24| Homo sapiens 12 BAC RP11-443B14 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 69213

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 299   tcccagcaccagcgcctgcc 318
             ||||||||||||||||||||
Sbjct: 50351 tcccagcaccagcgcctgcc 50370
to top
>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 218     gccgacgacgagcccgaaca 237
               ||||||||||||||||||||
Sbjct: 5165666 gccgacgacgagcccgaaca 5165685
to top
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 282      accggcgccgccacgcctcc 301
                ||||||||||||||||||||
Sbjct: 18732372 accggcgccgccacgcctcc 18732353
to top
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 215      gcagccgacgacgagcccga 234
                ||||||||||||||||||||
Sbjct: 21395937 gcagccgacgacgagcccga 21395918
to top
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 221     gacgacgagcccgaacacgccgaa 244
               |||||||||| |||||||||||||
Sbjct: 9780262 gacgacgagcgcgaacacgccgaa 9780285
to top
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 140      gtgctcctcctcgtccatgg 159
                ||||||||||||||||||||
Sbjct: 31938998 gtgctcctcctcgtccatgg 31939017
to top
>emb|AL662977.3|OSJN00176 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0072D21,
             complete sequence
          Length = 160456

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 282   accggcgccgccacgcctcc 301
             ||||||||||||||||||||
Sbjct: 81510 accggcgccgccacgcctcc 81491
to top
>dbj|AP005679.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OJ1210_A07
          Length = 131394

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 215   gcagccgacgacgagcccga 234
             ||||||||||||||||||||
Sbjct: 13042 gcagccgacgacgagcccga 13023
to top
>dbj|AP004814.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0471A11
          Length = 157740

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 140    gtgctcctcctcgtccatgg 159
              ||||||||||||||||||||
Sbjct: 99999  gtgctcctcctcgtccatgg 100018
to top
>dbj|AP005095.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:B1063H10
          Length = 170453

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 221   gacgacgagcccgaacacgccgaa 244
             |||||||||| |||||||||||||
Sbjct: 44194 gacgacgagcgcgaacacgccgaa 44217
to top
>ref|XM_310665.2| Anopheles gambiae str. PEST ENSANGP00000020753
           (ENSANGG00000018264), partial mRNA
          Length = 2488

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 227 gagcccgaacacgccgaacg 246
           ||||||||||||||||||||
Sbjct: 837 gagcccgaacacgccgaacg 818
to top
>dbj|AK108529.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-144-B12, full
           insert sequence
          Length = 1090

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 221 gacgacgagcccgaacacgccgaa 244
           |||||||||| |||||||||||||
Sbjct: 318 gacgacgagcgcgaacacgccgaa 295
to top
>dbj|AK071146.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023081D16, full
           insert sequence
          Length = 963

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 140 gtgctcctcctcgtccatgg 159
           ||||||||||||||||||||
Sbjct: 63  gtgctcctcctcgtccatgg 44
to top
>dbj|AK061269.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-D06, full
           insert sequence
          Length = 1075

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 140 gtgctcctcctcgtccatgg 159
           ||||||||||||||||||||
Sbjct: 97  gtgctcctcctcgtccatgg 78
to top
>emb|AM087403.1| Streptomyces venezuelae pSVH1 plasmid
          Length = 12652

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 119  agcggccaccgtcgcctccttgtgctcctcct 150
            |||| |||||||||||||||| ||| ||||||
Sbjct: 1500 agcgaccaccgtcgcctccttctgcgcctcct 1469
to top
>gb|AY109465.1| Zea mays CL6587_1 mRNA sequence
          Length = 1192

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 140 gtgctcctcctcgtccatgg 159
           ||||||||||||||||||||
Sbjct: 79  gtgctcctcctcgtccatgg 60
to top
>emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome
          Length = 2595221

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 220     cgacgacgagcccgaacacg 239
               ||||||||||||||||||||
Sbjct: 1801505 cgacgacgagcccgaacacg 1801524
to top
>gb|L23209.1|MZECP450A Zea mays cytochrome P-450 (cyp78) mRNA, complete cds
          Length = 2087

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 274 cgacgagcaccggcgccgcc 293
           ||||||||||||||||||||
Sbjct: 946 cgacgagcaccggcgccgcc 965


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,336,564
Number of Sequences: 3902068
Number of extensions: 2336564
Number of successful extensions: 48358
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 47788
Number of HSP's gapped (non-prelim): 552
length of query: 403
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 381
effective length of database: 17,147,199,772
effective search space: 6533083113132
effective search space used: 6533083113132
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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