Clone Name | rbart23c04 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | ACOX1_ARATH (O65202) Acyl-coenzyme A oxidase 1, peroxisomal (EC ... | 42 | 0.001 | 2 | ACO12_ARATH (Q9ZQP2) Putative acyl-coenzyme A oxidase 1.2, perox... | 40 | 0.003 | 3 | OLP1_LYCES (Q41350) Osmotin-like protein precursor | 30 | 3.5 | 4 | TLP2_PRUPE (P83335) Thaumatin-like protein 2 precursor (PpAZ8) | 29 | 6.0 | 5 | PR28_MYCTU (P0A5Q6) Proline-rich 28 kDa antigen precursor | 29 | 7.8 | 6 | PR28_MYCBO (P0A5Q7) Proline-rich 28 kDa antigen precursor | 29 | 7.8 |
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>ACOX1_ARATH (O65202) Acyl-coenzyme A oxidase 1, peroxisomal (EC 1.3.3.6) (AOX| 1) (Long-chain acyl-CoA oxidase) (AtCX1) Length = 664 Score = 41.6 bits (96), Expect = 0.001 Identities = 17/22 (77%), Positives = 21/22 (95%) Frame = -3 Query: 490 LYEEAWKDPLNETVVPDGYQEH 425 L+EEA KDPLN++VVPDGYQE+ Sbjct: 629 LFEEALKDPLNDSVVPDGYQEY 650
>ACO12_ARATH (Q9ZQP2) Putative acyl-coenzyme A oxidase 1.2, peroxisomal (EC| 1.3.3.6) Length = 664 Score = 40.0 bits (92), Expect = 0.003 Identities = 16/22 (72%), Positives = 21/22 (95%) Frame = -3 Query: 490 LYEEAWKDPLNETVVPDGYQEH 425 L+EEA KDPLN++VVPDGY+E+ Sbjct: 629 LFEEALKDPLNDSVVPDGYREY 650
>OLP1_LYCES (Q41350) Osmotin-like protein precursor| Length = 252 Score = 30.0 bits (66), Expect = 3.5 Identities = 17/39 (43%), Positives = 22/39 (56%), Gaps = 1/39 (2%) Frame = -1 Query: 348 SMLDSGCGAVINKRIKS-RGEVIGCCSLCWKGKSDRHCC 235 ++L+S C AV+ R G V+GC S C KSD CC Sbjct: 163 NLLES-CPAVLQFRSHGGHGPVVGCKSACEAFKSDEFCC 200
>TLP2_PRUPE (P83335) Thaumatin-like protein 2 precursor (PpAZ8)| Length = 242 Score = 29.3 bits (64), Expect = 6.0 Identities = 21/67 (31%), Positives = 30/67 (44%), Gaps = 17/67 (25%) Frame = -1 Query: 384 YDPSLVPE-SVPQSMLDSG---------CGAVIN-------KRIKSRGEVIGCCSLCWKG 256 YD SLV ++P S+ G C A +N ++I S G V+ C S C K Sbjct: 124 YDVSLVDGFNLPMSVTPQGGTGTCKMGSCAANVNLVCPSELQKIGSDGSVVACLSACVKF 183 Query: 255 KSDRHCC 235 ++CC Sbjct: 184 GEPQYCC 190
>PR28_MYCTU (P0A5Q6) Proline-rich 28 kDa antigen precursor| Length = 310 Score = 28.9 bits (63), Expect = 7.8 Identities = 20/65 (30%), Positives = 27/65 (41%) Frame = +1 Query: 181 QMLINYPGGSKNPFILLPTTVPVALAFPTK*TTTNHLSP*FDPLINYCSTSAVQHGLGDR 360 Q L PGGS N F P P+A P + + P P+ T A+ L D Sbjct: 55 QNLTALPGGSSNRFSPAPAPAPIASPIPVGAPGSTAVPPLPPPV-----TPAISGTLRDH 109 Query: 361 FRDQG 375 R++G Sbjct: 110 LREKG 114
>PR28_MYCBO (P0A5Q7) Proline-rich 28 kDa antigen precursor| Length = 310 Score = 28.9 bits (63), Expect = 7.8 Identities = 20/65 (30%), Positives = 27/65 (41%) Frame = +1 Query: 181 QMLINYPGGSKNPFILLPTTVPVALAFPTK*TTTNHLSP*FDPLINYCSTSAVQHGLGDR 360 Q L PGGS N F P P+A P + + P P+ T A+ L D Sbjct: 55 QNLTALPGGSSNRFSPAPAPAPIASPIPVGAPGSTAVPPLPPPV-----TPAISGTLRDH 109 Query: 361 FRDQG 375 R++G Sbjct: 110 LREKG 114 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 62,932,138 Number of Sequences: 219361 Number of extensions: 1117710 Number of successful extensions: 2558 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 2498 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2558 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3478785780 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)