ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart23c02
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1XIP1_WHEAT (Q8L5C6) Xylanase inhibitor protein 1 precursor (Clas... 66 2e-11
2XIP1_ORYSA (Q7GCM7) Xylanase inhibitor protein 1 precursor (Clas... 52 3e-07
3XIP2_ORYSA (Q53NL5) Xylanase inhibitor protein 2 precursor (Clas... 46 2e-05
4CHLY_HEVBR (P23472) Hevamine-A precursor [Includes: Chitinase (E... 40 0.001
5CHIA_ARATH (P19172) Acidic endochitinase precursor (EC 3.2.1.14) 39 0.003
6CHIT3_VITVI (P51614) Acidic endochitinase precursor (EC 3.2.1.14) 38 0.006
7CHIA_PHAAN (P29024) Acidic endochitinase precursor (EC 3.2.1.14) 35 0.036
8CHIA_CICAR (P36908) Acidic endochitinase precursor (EC 3.2.1.14) 35 0.047
9CHIB_TOBAC (P29061) Basic endochitinase precursor (EC 3.2.1.14) 33 0.14
10CONB_CANEN (P49347) Concanavalin B precursor (Con B) 31 0.68
11HIS8_GEOMG (Q39YP6) Histidinol-phosphate aminotransferase (EC 2.... 29 2.6
12VGLE_VZVD (P09259) Glycoprotein E precursor (Glycoprotein GI) 29 3.4
13CHIA_CUCSA (P17541) Acidic endochitinase precursor (EC 3.2.1.14) 29 3.4
14CHIE_BETVU (P36910) Acidic endochitinase SE2 precursor (EC 3.2.1... 29 3.4
15CHIA_TOBAC (P29060) Acidic endochitinase precursor (EC 3.2.1.14) 28 4.4
16MLL2_HUMAN (O14686) Myeloid/lymphoid or mixed-lineage leukemia p... 28 4.4
17KNH1_CANGA (O74684) Cell wall synthesis protein KNH1 precursor 28 5.8
18MICA2_HUMAN (O94851) Protein MICAL-2 28 7.5
19RIPK3_HUMAN (Q9Y572) Receptor-interacting serine/threonine-prote... 27 9.9
20LDLR1_XENLA (Q99087) Low-density lipoprotein receptor 1 precurso... 27 9.9
21ZNF22_RAT (Q9ERU2) Zinc finger protein 22 (Kruppel-type zinc fin... 27 9.9
22APG_ARATH (P40602) Anter-specific proline-rich protein APG precu... 27 9.9

>XIP1_WHEAT (Q8L5C6) Xylanase inhibitor protein 1 precursor (Class III|
           chitinase homolog) (XIP-I protein)
          Length = 304

 Score = 66.2 bits (160), Expect = 2e-11
 Identities = 27/39 (69%), Positives = 33/39 (84%)
 Frame = -1

Query: 305 YVHPKNLYYGVIQVVQKAANYGGVMVWERYEDKRTNYSS 189
           +VHPKN+YYGV  V QK  NYGG+M+W+RY DK+TNYSS
Sbjct: 260 WVHPKNVYYGVAPVAQKKDNYGGIMLWDRYFDKQTNYSS 298



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>XIP1_ORYSA (Q7GCM7) Xylanase inhibitor protein 1 precursor (Class III|
           chitinase homolog a) (RIXI protein)
          Length = 304

 Score = 52.4 bits (124), Expect = 3e-07
 Identities = 21/41 (51%), Positives = 28/41 (68%)
 Frame = -1

Query: 293 KNLYYGVIQVVQKAANYGGVMVWERYEDKRTNYSSYAIQWA 171
           K LYY ++  VQKA NYGG+M+W+R+ DK+T Y      WA
Sbjct: 264 KQLYYDLLPNVQKAKNYGGIMLWDRFYDKQTGYGKTVKYWA 304



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>XIP2_ORYSA (Q53NL5) Xylanase inhibitor protein 2 precursor (Class III|
           chitinase homolog h)
          Length = 290

 Score = 46.2 bits (108), Expect = 2e-05
 Identities = 18/43 (41%), Positives = 30/43 (69%)
 Frame = -1

Query: 320 EQKVGYVHPKNLYYGVIQVVQKAANYGGVMVWERYEDKRTNYS 192
           EQ   ++  K+LYY ++Q V+   NYGG+ +++RY DK+ NY+
Sbjct: 245 EQDSAWMFQKDLYYEMLQFVRSLPNYGGLAIYDRYFDKKANYT 287



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>CHLY_HEVBR (P23472) Hevamine-A precursor [Includes: Chitinase (EC 3.2.1.14);|
           Lysozyme (EC 3.2.1.17)]
          Length = 311

 Score = 40.4 bits (93), Expect = 0.001
 Identities = 16/40 (40%), Positives = 25/40 (62%)
 Frame = -1

Query: 308 GYVHPKNLYYGVIQVVQKAANYGGVMVWERYEDKRTNYSS 189
           GYV P  L   ++  ++K+  YGGVM+W ++ D +  YSS
Sbjct: 254 GYVPPDVLISRILPEIKKSPKYGGVMLWSKFYDDKNGYSS 293



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>CHIA_ARATH (P19172) Acidic endochitinase precursor (EC 3.2.1.14)|
          Length = 302

 Score = 39.3 bits (90), Expect = 0.003
 Identities = 15/40 (37%), Positives = 25/40 (62%)
 Frame = -1

Query: 308 GYVHPKNLYYGVIQVVQKAANYGGVMVWERYEDKRTNYSS 189
           GY+ P  L   ++  ++K+  YGGVM+W ++ D +  YSS
Sbjct: 257 GYIPPDVLTSQILPTLKKSRKYGGVMLWSKFWDDKNGYSS 296



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>CHIT3_VITVI (P51614) Acidic endochitinase precursor (EC 3.2.1.14)|
          Length = 301

 Score = 38.1 bits (87), Expect = 0.006
 Identities = 14/40 (35%), Positives = 26/40 (65%)
 Frame = -1

Query: 308 GYVHPKNLYYGVIQVVQKAANYGGVMVWERYEDKRTNYSS 189
           G++    L   ++ V++++  YGGVM+W +Y D ++ YSS
Sbjct: 256 GFIPANVLTSQILPVIKRSPKYGGVMLWSKYYDDQSGYSS 295



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>CHIA_PHAAN (P29024) Acidic endochitinase precursor (EC 3.2.1.14)|
          Length = 298

 Score = 35.4 bits (80), Expect = 0.036
 Identities = 14/43 (32%), Positives = 26/43 (60%)
 Frame = -1

Query: 308 GYVHPKNLYYGVIQVVQKAANYGGVMVWERYEDKRTNYSSYAI 180
           G++    L   V+  ++ ++ YGGVM+W+R+ D ++ YS   I
Sbjct: 253 GFIPADVLTSQVLPTIKGSSKYGGVMLWDRFNDGQSGYSGAII 295



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>CHIA_CICAR (P36908) Acidic endochitinase precursor (EC 3.2.1.14)|
          Length = 293

 Score = 35.0 bits (79), Expect = 0.047
 Identities = 11/29 (37%), Positives = 21/29 (72%)
 Frame = -1

Query: 275 VIQVVQKAANYGGVMVWERYEDKRTNYSS 189
           V+  ++ +  YGGVM+W+R+ D ++ YS+
Sbjct: 259 VLPAIKTSPKYGGVMIWDRFNDAQSGYSN 287



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>CHIB_TOBAC (P29061) Basic endochitinase precursor (EC 3.2.1.14)|
          Length = 294

 Score = 33.5 bits (75), Expect = 0.14
 Identities = 15/40 (37%), Positives = 24/40 (60%)
 Frame = -1

Query: 308 GYVHPKNLYYGVIQVVQKAANYGGVMVWERYEDKRTNYSS 189
           GY+  + L   V+  ++ ++ YGGVM+W R  D +  YSS
Sbjct: 249 GYIPKQVLMSQVLPFLKGSSKYGGVMLWNRKFDVQCGYSS 288



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>CONB_CANEN (P49347) Concanavalin B precursor (Con B)|
          Length = 324

 Score = 31.2 bits (69), Expect = 0.68
 Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
 Frame = -1

Query: 308 GYVHPKNLYYGVIQVVQKA-ANYGGVMVWERYEDKRTNYSSYAIQW 174
           GY+ P  L   V+  +      Y G+ +W R  DK T YS+  I++
Sbjct: 262 GYIPPSALIGQVLPYLPDLQTRYAGIALWNRQADKETGYSTNIIRY 307



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>HIS8_GEOMG (Q39YP6) Histidinol-phosphate aminotransferase (EC 2.6.1.9)|
           (Imidazole acetol-phosphate transaminase)
          Length = 350

 Score = 29.3 bits (64), Expect = 2.6
 Identities = 11/22 (50%), Positives = 15/22 (68%)
 Frame = -1

Query: 317 QKVGYVHPKNLYYGVIQVVQKA 252
           +++GYVHP   YYG +  VQ A
Sbjct: 105 EEIGYVHPSYSYYGTLAEVQGA 126



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>VGLE_VZVD (P09259) Glycoprotein E precursor (Glycoprotein GI)|
          Length = 623

 Score = 28.9 bits (63), Expect = 3.4
 Identities = 12/42 (28%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
 Frame = -1

Query: 296 PKNLYYGVIQVVQKAANYGGVMVWE-RYEDKRTNYSSYAIQW 174
           P  +  GV++V++    Y GV +W  R  D  + Y+++ + W
Sbjct: 278 PPEIEPGVLKVLRTEKQYLGVYIWNMRGSDGTSTYATFLVTW 319



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>CHIA_CUCSA (P17541) Acidic endochitinase precursor (EC 3.2.1.14)|
          Length = 292

 Score = 28.9 bits (63), Expect = 3.4
 Identities = 11/33 (33%), Positives = 20/33 (60%)
 Frame = -1

Query: 308 GYVHPKNLYYGVIQVVQKAANYGGVMVWERYED 210
           G++    L   V+  ++ ++NYGGVM+W +  D
Sbjct: 248 GFIPADVLISQVLPTIKASSNYGGVMLWSKAFD 280



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>CHIE_BETVU (P36910) Acidic endochitinase SE2 precursor (EC 3.2.1.14)|
          Length = 293

 Score = 28.9 bits (63), Expect = 3.4
 Identities = 14/40 (35%), Positives = 23/40 (57%)
 Frame = -1

Query: 308 GYVHPKNLYYGVIQVVQKAANYGGVMVWERYEDKRTNYSS 189
           G++    L   V+  ++ +A YGGVM+W +  D  + YSS
Sbjct: 250 GFIPADALTSQVLPTIKGSAKYGGVMLWSKAYD--SGYSS 287



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>CHIA_TOBAC (P29060) Acidic endochitinase precursor (EC 3.2.1.14)|
          Length = 291

 Score = 28.5 bits (62), Expect = 4.4
 Identities = 13/40 (32%), Positives = 22/40 (55%)
 Frame = -1

Query: 308 GYVHPKNLYYGVIQVVQKAANYGGVMVWERYEDKRTNYSS 189
           G++    L   V+ ++  +  YGGVM+W ++ D    YSS
Sbjct: 248 GFIPSDVLVSQVLPLINGSPKYGGVMLWSKFYD--NGYSS 285



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>MLL2_HUMAN (O14686) Myeloid/lymphoid or mixed-lineage leukemia protein 2|
            (ALL1-related protein)
          Length = 5262

 Score = 28.5 bits (62), Expect = 4.4
 Identities = 17/39 (43%), Positives = 20/39 (51%)
 Frame = -3

Query: 303  RSSKEPLLRRHTGGAEGGQLWRGHGLGTLRGQADKLQQL 187
            RSS  P  RR  GGA GG   RG G   L+  A  ++ L
Sbjct: 1029 RSSSFPGRRRPRGGAHGG---RGRGRARLKSTASSIETL 1064



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>KNH1_CANGA (O74684) Cell wall synthesis protein KNH1 precursor|
          Length = 265

 Score = 28.1 bits (61), Expect = 5.8
 Identities = 17/36 (47%), Positives = 22/36 (61%)
 Frame = -2

Query: 289 TFITASYRWCRRRPTMAGSWFGNVTRTSGQITAVTP 182
           T ITA+  W RR  T A S+F ++T T  Q T +TP
Sbjct: 180 TKITAT-TWSRRYATSAVSFFTSLTATPVQHTTLTP 214



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>MICA2_HUMAN (O94851) Protein MICAL-2|
          Length = 1124

 Score = 27.7 bits (60), Expect = 7.5
 Identities = 21/67 (31%), Positives = 31/67 (46%), Gaps = 3/67 (4%)
 Frame = +2

Query: 89  SKHMHMHMQYTDGYNKSTRGRS---ERRRVKPIGWRNCCNLSACPRNVPKP*PRHSWPPS 259
           +K   M  Q    + +STR  S   + RRV  IG    C+ S  P +   P P  + P  
Sbjct: 713 NKVKSMANQLLAKFEESTRNPSLMKQERRVSGIGKPVLCSSSGPPVHSCCPKPEEATPSP 772

Query: 260 APPV*RR 280
           +PP+ R+
Sbjct: 773 SPPLKRQ 779



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>RIPK3_HUMAN (Q9Y572) Receptor-interacting serine/threonine-protein kinase 3 (EC|
           2.7.11.1) (RIP-like protein kinase 3)
           (Receptor-interacting protein 3) (RIP-3)
          Length = 518

 Score = 27.3 bits (59), Expect = 9.9
 Identities = 13/39 (33%), Positives = 18/39 (46%)
 Frame = +2

Query: 122 DGYNKSTRGRSERRRVKPIGWRNCCNLSACPRNVPKP*P 238
           DG+ ++   +  R  V    W N  NL   P +VPK  P
Sbjct: 328 DGFRRTIENQHSRNDVMVSEWLNKLNLEEPPSSVPKKCP 366



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>LDLR1_XENLA (Q99087) Low-density lipoprotein receptor 1 precursor (LDL receptor|
           1)
          Length = 909

 Score = 27.3 bits (59), Expect = 9.9
 Identities = 12/34 (35%), Positives = 18/34 (52%)
 Frame = -1

Query: 299 HPKNLYYGVIQVVQKAANYGGVMVWERYEDKRTN 198
           HP  LY  +  V+     +GG +VW+ +  K TN
Sbjct: 834 HPTALYIVLPIVILCLVAFGGFLVWKNWRLKNTN 867



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>ZNF22_RAT (Q9ERU2) Zinc finger protein 22 (Kruppel-type zinc finger protein|
           Krox-25)
          Length = 237

 Score = 27.3 bits (59), Expect = 9.9
 Identities = 9/33 (27%), Positives = 16/33 (48%)
 Frame = +2

Query: 89  SKHMHMHMQYTDGYNKSTRGRSERRRVKPIGWR 187
           S H+  HM+         RG++ R +  P+ W+
Sbjct: 179 SSHLRQHMKVHKEKKSHKRGKNARAKTHPVSWK 211



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>APG_ARATH (P40602) Anter-specific proline-rich protein APG precursor|
          Length = 534

 Score = 27.3 bits (59), Expect = 9.9
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = +2

Query: 203 SACPRNVPKP*PRHSWPPSAPP 268
           S CP   PKP P+   PP+ PP
Sbjct: 106 SPCPSPPPKPQPKPVPPPACPP 127


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 49,462,904
Number of Sequences: 219361
Number of extensions: 944852
Number of successful extensions: 2940
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 2811
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2937
length of database: 80,573,946
effective HSP length: 82
effective length of database: 62,586,344
effective search space used: 1502072256
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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