Clone Name | rbart23c02 |
---|---|
Clone Library Name | barley_pub |
>XIP1_WHEAT (Q8L5C6) Xylanase inhibitor protein 1 precursor (Class III| chitinase homolog) (XIP-I protein) Length = 304 Score = 66.2 bits (160), Expect = 2e-11 Identities = 27/39 (69%), Positives = 33/39 (84%) Frame = -1 Query: 305 YVHPKNLYYGVIQVVQKAANYGGVMVWERYEDKRTNYSS 189 +VHPKN+YYGV V QK NYGG+M+W+RY DK+TNYSS Sbjct: 260 WVHPKNVYYGVAPVAQKKDNYGGIMLWDRYFDKQTNYSS 298
>XIP1_ORYSA (Q7GCM7) Xylanase inhibitor protein 1 precursor (Class III| chitinase homolog a) (RIXI protein) Length = 304 Score = 52.4 bits (124), Expect = 3e-07 Identities = 21/41 (51%), Positives = 28/41 (68%) Frame = -1 Query: 293 KNLYYGVIQVVQKAANYGGVMVWERYEDKRTNYSSYAIQWA 171 K LYY ++ VQKA NYGG+M+W+R+ DK+T Y WA Sbjct: 264 KQLYYDLLPNVQKAKNYGGIMLWDRFYDKQTGYGKTVKYWA 304
>XIP2_ORYSA (Q53NL5) Xylanase inhibitor protein 2 precursor (Class III| chitinase homolog h) Length = 290 Score = 46.2 bits (108), Expect = 2e-05 Identities = 18/43 (41%), Positives = 30/43 (69%) Frame = -1 Query: 320 EQKVGYVHPKNLYYGVIQVVQKAANYGGVMVWERYEDKRTNYS 192 EQ ++ K+LYY ++Q V+ NYGG+ +++RY DK+ NY+ Sbjct: 245 EQDSAWMFQKDLYYEMLQFVRSLPNYGGLAIYDRYFDKKANYT 287
>CHLY_HEVBR (P23472) Hevamine-A precursor [Includes: Chitinase (EC 3.2.1.14);| Lysozyme (EC 3.2.1.17)] Length = 311 Score = 40.4 bits (93), Expect = 0.001 Identities = 16/40 (40%), Positives = 25/40 (62%) Frame = -1 Query: 308 GYVHPKNLYYGVIQVVQKAANYGGVMVWERYEDKRTNYSS 189 GYV P L ++ ++K+ YGGVM+W ++ D + YSS Sbjct: 254 GYVPPDVLISRILPEIKKSPKYGGVMLWSKFYDDKNGYSS 293
>CHIA_ARATH (P19172) Acidic endochitinase precursor (EC 3.2.1.14)| Length = 302 Score = 39.3 bits (90), Expect = 0.003 Identities = 15/40 (37%), Positives = 25/40 (62%) Frame = -1 Query: 308 GYVHPKNLYYGVIQVVQKAANYGGVMVWERYEDKRTNYSS 189 GY+ P L ++ ++K+ YGGVM+W ++ D + YSS Sbjct: 257 GYIPPDVLTSQILPTLKKSRKYGGVMLWSKFWDDKNGYSS 296
>CHIT3_VITVI (P51614) Acidic endochitinase precursor (EC 3.2.1.14)| Length = 301 Score = 38.1 bits (87), Expect = 0.006 Identities = 14/40 (35%), Positives = 26/40 (65%) Frame = -1 Query: 308 GYVHPKNLYYGVIQVVQKAANYGGVMVWERYEDKRTNYSS 189 G++ L ++ V++++ YGGVM+W +Y D ++ YSS Sbjct: 256 GFIPANVLTSQILPVIKRSPKYGGVMLWSKYYDDQSGYSS 295
>CHIA_PHAAN (P29024) Acidic endochitinase precursor (EC 3.2.1.14)| Length = 298 Score = 35.4 bits (80), Expect = 0.036 Identities = 14/43 (32%), Positives = 26/43 (60%) Frame = -1 Query: 308 GYVHPKNLYYGVIQVVQKAANYGGVMVWERYEDKRTNYSSYAI 180 G++ L V+ ++ ++ YGGVM+W+R+ D ++ YS I Sbjct: 253 GFIPADVLTSQVLPTIKGSSKYGGVMLWDRFNDGQSGYSGAII 295
>CHIA_CICAR (P36908) Acidic endochitinase precursor (EC 3.2.1.14)| Length = 293 Score = 35.0 bits (79), Expect = 0.047 Identities = 11/29 (37%), Positives = 21/29 (72%) Frame = -1 Query: 275 VIQVVQKAANYGGVMVWERYEDKRTNYSS 189 V+ ++ + YGGVM+W+R+ D ++ YS+ Sbjct: 259 VLPAIKTSPKYGGVMIWDRFNDAQSGYSN 287
>CHIB_TOBAC (P29061) Basic endochitinase precursor (EC 3.2.1.14)| Length = 294 Score = 33.5 bits (75), Expect = 0.14 Identities = 15/40 (37%), Positives = 24/40 (60%) Frame = -1 Query: 308 GYVHPKNLYYGVIQVVQKAANYGGVMVWERYEDKRTNYSS 189 GY+ + L V+ ++ ++ YGGVM+W R D + YSS Sbjct: 249 GYIPKQVLMSQVLPFLKGSSKYGGVMLWNRKFDVQCGYSS 288
>CONB_CANEN (P49347) Concanavalin B precursor (Con B)| Length = 324 Score = 31.2 bits (69), Expect = 0.68 Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 1/46 (2%) Frame = -1 Query: 308 GYVHPKNLYYGVIQVVQKA-ANYGGVMVWERYEDKRTNYSSYAIQW 174 GY+ P L V+ + Y G+ +W R DK T YS+ I++ Sbjct: 262 GYIPPSALIGQVLPYLPDLQTRYAGIALWNRQADKETGYSTNIIRY 307
>HIS8_GEOMG (Q39YP6) Histidinol-phosphate aminotransferase (EC 2.6.1.9)| (Imidazole acetol-phosphate transaminase) Length = 350 Score = 29.3 bits (64), Expect = 2.6 Identities = 11/22 (50%), Positives = 15/22 (68%) Frame = -1 Query: 317 QKVGYVHPKNLYYGVIQVVQKA 252 +++GYVHP YYG + VQ A Sbjct: 105 EEIGYVHPSYSYYGTLAEVQGA 126
>VGLE_VZVD (P09259) Glycoprotein E precursor (Glycoprotein GI)| Length = 623 Score = 28.9 bits (63), Expect = 3.4 Identities = 12/42 (28%), Positives = 23/42 (54%), Gaps = 1/42 (2%) Frame = -1 Query: 296 PKNLYYGVIQVVQKAANYGGVMVWE-RYEDKRTNYSSYAIQW 174 P + GV++V++ Y GV +W R D + Y+++ + W Sbjct: 278 PPEIEPGVLKVLRTEKQYLGVYIWNMRGSDGTSTYATFLVTW 319
>CHIA_CUCSA (P17541) Acidic endochitinase precursor (EC 3.2.1.14)| Length = 292 Score = 28.9 bits (63), Expect = 3.4 Identities = 11/33 (33%), Positives = 20/33 (60%) Frame = -1 Query: 308 GYVHPKNLYYGVIQVVQKAANYGGVMVWERYED 210 G++ L V+ ++ ++NYGGVM+W + D Sbjct: 248 GFIPADVLISQVLPTIKASSNYGGVMLWSKAFD 280
>CHIE_BETVU (P36910) Acidic endochitinase SE2 precursor (EC 3.2.1.14)| Length = 293 Score = 28.9 bits (63), Expect = 3.4 Identities = 14/40 (35%), Positives = 23/40 (57%) Frame = -1 Query: 308 GYVHPKNLYYGVIQVVQKAANYGGVMVWERYEDKRTNYSS 189 G++ L V+ ++ +A YGGVM+W + D + YSS Sbjct: 250 GFIPADALTSQVLPTIKGSAKYGGVMLWSKAYD--SGYSS 287
>CHIA_TOBAC (P29060) Acidic endochitinase precursor (EC 3.2.1.14)| Length = 291 Score = 28.5 bits (62), Expect = 4.4 Identities = 13/40 (32%), Positives = 22/40 (55%) Frame = -1 Query: 308 GYVHPKNLYYGVIQVVQKAANYGGVMVWERYEDKRTNYSS 189 G++ L V+ ++ + YGGVM+W ++ D YSS Sbjct: 248 GFIPSDVLVSQVLPLINGSPKYGGVMLWSKFYD--NGYSS 285
>MLL2_HUMAN (O14686) Myeloid/lymphoid or mixed-lineage leukemia protein 2| (ALL1-related protein) Length = 5262 Score = 28.5 bits (62), Expect = 4.4 Identities = 17/39 (43%), Positives = 20/39 (51%) Frame = -3 Query: 303 RSSKEPLLRRHTGGAEGGQLWRGHGLGTLRGQADKLQQL 187 RSS P RR GGA GG RG G L+ A ++ L Sbjct: 1029 RSSSFPGRRRPRGGAHGG---RGRGRARLKSTASSIETL 1064
>KNH1_CANGA (O74684) Cell wall synthesis protein KNH1 precursor| Length = 265 Score = 28.1 bits (61), Expect = 5.8 Identities = 17/36 (47%), Positives = 22/36 (61%) Frame = -2 Query: 289 TFITASYRWCRRRPTMAGSWFGNVTRTSGQITAVTP 182 T ITA+ W RR T A S+F ++T T Q T +TP Sbjct: 180 TKITAT-TWSRRYATSAVSFFTSLTATPVQHTTLTP 214
>MICA2_HUMAN (O94851) Protein MICAL-2| Length = 1124 Score = 27.7 bits (60), Expect = 7.5 Identities = 21/67 (31%), Positives = 31/67 (46%), Gaps = 3/67 (4%) Frame = +2 Query: 89 SKHMHMHMQYTDGYNKSTRGRS---ERRRVKPIGWRNCCNLSACPRNVPKP*PRHSWPPS 259 +K M Q + +STR S + RRV IG C+ S P + P P + P Sbjct: 713 NKVKSMANQLLAKFEESTRNPSLMKQERRVSGIGKPVLCSSSGPPVHSCCPKPEEATPSP 772 Query: 260 APPV*RR 280 +PP+ R+ Sbjct: 773 SPPLKRQ 779
>RIPK3_HUMAN (Q9Y572) Receptor-interacting serine/threonine-protein kinase 3 (EC| 2.7.11.1) (RIP-like protein kinase 3) (Receptor-interacting protein 3) (RIP-3) Length = 518 Score = 27.3 bits (59), Expect = 9.9 Identities = 13/39 (33%), Positives = 18/39 (46%) Frame = +2 Query: 122 DGYNKSTRGRSERRRVKPIGWRNCCNLSACPRNVPKP*P 238 DG+ ++ + R V W N NL P +VPK P Sbjct: 328 DGFRRTIENQHSRNDVMVSEWLNKLNLEEPPSSVPKKCP 366
>LDLR1_XENLA (Q99087) Low-density lipoprotein receptor 1 precursor (LDL receptor| 1) Length = 909 Score = 27.3 bits (59), Expect = 9.9 Identities = 12/34 (35%), Positives = 18/34 (52%) Frame = -1 Query: 299 HPKNLYYGVIQVVQKAANYGGVMVWERYEDKRTN 198 HP LY + V+ +GG +VW+ + K TN Sbjct: 834 HPTALYIVLPIVILCLVAFGGFLVWKNWRLKNTN 867
>ZNF22_RAT (Q9ERU2) Zinc finger protein 22 (Kruppel-type zinc finger protein| Krox-25) Length = 237 Score = 27.3 bits (59), Expect = 9.9 Identities = 9/33 (27%), Positives = 16/33 (48%) Frame = +2 Query: 89 SKHMHMHMQYTDGYNKSTRGRSERRRVKPIGWR 187 S H+ HM+ RG++ R + P+ W+ Sbjct: 179 SSHLRQHMKVHKEKKSHKRGKNARAKTHPVSWK 211
>APG_ARATH (P40602) Anter-specific proline-rich protein APG precursor| Length = 534 Score = 27.3 bits (59), Expect = 9.9 Identities = 11/22 (50%), Positives = 13/22 (59%) Frame = +2 Query: 203 SACPRNVPKP*PRHSWPPSAPP 268 S CP PKP P+ PP+ PP Sbjct: 106 SPCPSPPPKPQPKPVPPPACPP 127 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 49,462,904 Number of Sequences: 219361 Number of extensions: 944852 Number of successful extensions: 2940 Number of sequences better than 10.0: 22 Number of HSP's better than 10.0 without gapping: 2811 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2937 length of database: 80,573,946 effective HSP length: 82 effective length of database: 62,586,344 effective search space used: 1502072256 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)