Clone Information

BLAST Search Result

Clone Name	rbart23c01
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	DHSB_PARDE (Q59662) Succinate dehydrogenase iron-sulfur protein ...	94	1e-19
2	DHSB_RICCN (Q92JJ8) Succinate dehydrogenase iron-sulfur protein ...	87	2e-17
3	DHSB_HUMAN (P21912) Succinate dehydrogenase [ubiquinone] iron-su...	85	8e-17
4	DHSB_RICPR (Q9ZEA1) Succinate dehydrogenase iron-sulfur protein ...	84	1e-16
5	DHSB_MOUSE (Q9CQA3) Succinate dehydrogenase [ubiquinone] iron-su...	84	2e-16
6	DHSB_DROME (P21914) Succinate dehydrogenase [ubiquinone] iron-su...	82	7e-16
7	DHSB_RECAM (P80480) Succinate dehydrogenase [ubiquinone] iron-su...	80	3e-15
8	DHSB_CYACA (P48933) Succinate dehydrogenase [ubiquinone] iron-su...	79	5e-15
9	DHSB_MYCGR (O42772) Succinate dehydrogenase [ubiquinone] iron-su...	78	8e-15
10	DHSB_CAEEL (Q09545) Putative succinate dehydrogenase [ubiquinone...	76	4e-14
11	DHSB_USTMA (P32420) Succinate dehydrogenase [ubiquinone] iron-su...	75	9e-14
12	DHSB_CANGA (Q6FWS8) Succinate dehydrogenase [ubiquinone] iron-su...	74	2e-13
13	DHSB_YEAST (P21801) Succinate dehydrogenase [ubiquinone] iron-su...	74	2e-13
14	DHSB_CHOCR (P48932) Succinate dehydrogenase [ubiquinone] iron-su...	74	2e-13
15	DHSB_UROFA (Q70KF8) Succinate dehydrogenase [ubiquinone] iron-su...	74	2e-13
16	DHSB_SCHPO (P21911) Succinate dehydrogenase [ubiquinone] iron-su...	71	9e-13
17	DHSB_PORPU (P80477) Succinate dehydrogenase [ubiquinone] iron-su...	70	3e-12
18	DHSB_ECOLI (P07014) Succinate dehydrogenase iron-sulfur protein ...	69	6e-12
19	DHSB_ASHGO (Q75CI4) Succinate dehydrogenase [ubiquinone] iron-su...	67	1e-11
20	DHSB_SALTY (Q8ZQU2) Succinate dehydrogenase iron-sulfur protein ...	67	2e-11
21	DHSB_COXBU (P51053) Succinate dehydrogenase iron-sulfur protein ...	64	2e-10
22	DHSB_RAT (P21913) Succinate dehydrogenase [ubiquinone] iron-sulf...	58	1e-08
23	FRDB_SHIFL (P0AC50) Fumarate reductase iron-sulfur protein (EC 1...	42	5e-04
24	FRDB_ECOLI (P0AC47) Fumarate reductase iron-sulfur protein (EC 1...	42	5e-04
25	FRDB_ECOL6 (P0AC48) Fumarate reductase iron-sulfur protein (EC 1...	42	5e-04
26	FRDB_ECO57 (P0AC49) Fumarate reductase iron-sulfur protein (EC 1...	42	5e-04
27	FRDB_PROVU (P20921) Fumarate reductase iron-sulfur protein (EC 1...	42	5e-04
28	FRDB_MYCTU (Q10761) Fumarate reductase iron-sulfur protein (EC 1...	37	0.015
29	FRDB_HAEIN (P44893) Fumarate reductase iron-sulfur protein (EC 1...	36	0.044
30	DHSB_BACSU (P08066) Succinate dehydrogenase iron-sulfur protein ...	33	0.29
31	REPA_BACSU (P13962) Protein repA	31	1.1
32	ITPR3_HUMAN (Q14573) Inositol 1,4,5-trisphosphate receptor type ...	30	1.9
33	ITPR3_BOVIN (Q8WN95) Inositol 1,4,5-trisphosphate receptor type ...	30	1.9
34	TRY2_ANOGA (P35036) Trypsin-2 precursor (EC 3.4.21.4)	30	2.4
35	ITPR3_MOUSE (P70227) Inositol 1,4,5-trisphosphate receptor type ...	30	3.2
36	IL1A_MACMU (P48089) Interleukin-1 alpha precursor (IL-1 alpha) (...	29	4.1
37	IL1A_MACFA (P79340) Interleukin-1 alpha precursor (IL-1 alpha) (...	29	4.1
38	ITPR3_RAT (Q63269) Inositol 1,4,5-trisphosphate receptor type 3 ...	29	4.1
39	HGDA_ACIFE (P11569) (R)-2-hydroxyglutaryl-CoA dehydratase alpha-...	28	7.1
40	FRDB_WOLSU (P17596) Fumarate reductase iron-sulfur protein (EC 1...	28	7.1
41	ASHH3_ARATH (Q945S8) Histone-lysine N-methyltransferase ASHH3 (E...	28	7.1
42	PRI2_NEUCR (Q8NIZ4) Probable DNA primase large subunit (EC 2.7.7.-)	28	9.2
43	Y4XL_RHISN (P55704) Hypothetical protein y4xL	28	9.2
44	BBS2_MOUSE (Q9CWF6) Bardet-Biedl syndrome 2 protein homolog	28	9.2
45	HDRC_METAC (Q8TIB9) CoB--CoM heterodisulfide reductase 1 iron-su...	28	9.2
46	NFAT5_HUMAN (O94916) Nuclear factor of activated T-cells 5 (T-ce...	28	9.2
47	CLCL_RALSO (Q8XTT4) Putative chloride channel protein clcB-like	28	9.2
48	NFAT5_MOUSE (Q9WV30) Nuclear factor of activated T-cells 5 (T ce...	28	9.2
49	HIS4_COLP3 (Q47XB4) 1-(5-phosphoribosyl)-5-[(5-phosphoribosylami...	28	9.2

>DHSB_PARDE (Q59662) Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)|
          Length = 259

 Score = 94.0 bits (232), Expect = 1e-19
 Identities = 43/60 (71%), Positives = 48/60 (80%)
 Frame = -2

Query: 428 LLHANRWIQDSRDEFTKERLDSINDEFKLYRCHTIKNCTHACPKGLNPAKQIDTIKKLQL 249
           LLHA RWI DSRDE T ERLDS+ D FKLYRCHTI NCT+ CPKGLNPAK I +IK + +
Sbjct: 196 LLHAYRWIIDSRDEATGERLDSLEDPFKLYRCHTIMNCTNTCPKGLNPAKAIASIKHMMV 255

to top

>DHSB_RICCN (Q92JJ8) Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)|
          Length = 261

 Score = 87.0 bits (214), Expect = 2e-17
 Identities = 40/58 (68%), Positives = 44/58 (75%)
 Frame = -2

Query: 428 LLHANRWIQDSRDEFTKERLDSINDEFKLYRCHTIKNCTHACPKGLNPAKQIDTIKKL 255
           LL A RWI DSRD+ T ERL+++ D FKLYRCHTI NCT  CPKGLNPAK I  IK L
Sbjct: 197 LLQAYRWIADSRDDNTGERLEALEDPFKLYRCHTIMNCTKTCPKGLNPAKAIGKIKSL 254

to top

>DHSB_HUMAN (P21912) Succinate dehydrogenase [ubiquinone] iron-sulfur protein,|
           mitochondrial precursor (EC 1.3.5.1) (Ip) (Iron-sulfur
           subunit of complex II)
          Length = 280

 Score = 84.7 bits (208), Expect = 8e-17
 Identities = 37/58 (63%), Positives = 43/58 (74%)
 Frame = -2

Query: 428 LLHANRWIQDSRDEFTKERLDSINDEFKLYRCHTIKNCTHACPKGLNPAKQIDTIKKL 255
           L+ A RW+ DSRD+FT+ERL  + D F LYRCHTI NCT  CPKGLNP K I  IKK+
Sbjct: 212 LMQAYRWMIDSRDDFTEERLAKLQDPFSLYRCHTIMNCTRTCPKGLNPGKAIAEIKKM 269

to top

>DHSB_RICPR (Q9ZEA1) Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)|
          Length = 261

 Score = 84.3 bits (207), Expect = 1e-16
 Identities = 38/58 (65%), Positives = 43/58 (74%)
 Frame = -2

Query: 428 LLHANRWIQDSRDEFTKERLDSINDEFKLYRCHTIKNCTHACPKGLNPAKQIDTIKKL 255
           LL A RWI DSRD+ T  RL+++ D FKLYRCHTI NCT  CPKGLNPAK I  +K L
Sbjct: 197 LLQAYRWIADSRDDNTGARLEALEDPFKLYRCHTIMNCTKTCPKGLNPAKAIGRVKNL 254

to top

>DHSB_MOUSE (Q9CQA3) Succinate dehydrogenase [ubiquinone] iron-sulfur protein,|
           mitochondrial precursor (EC 1.3.5.1) (Ip) (Iron-sulfur
           subunit of complex II)
          Length = 282

 Score = 83.6 bits (205), Expect = 2e-16
 Identities = 36/58 (62%), Positives = 43/58 (74%)
 Frame = -2

Query: 428 LLHANRWIQDSRDEFTKERLDSINDEFKLYRCHTIKNCTHACPKGLNPAKQIDTIKKL 255
           L+ A RW+ DSRD+FT+ERL  + D F +YRCHTI NCT  CPKGLNP K I  IKK+
Sbjct: 214 LMQAYRWMIDSRDDFTEERLAKLQDPFSVYRCHTIMNCTQTCPKGLNPGKAIAEIKKM 271

to top

>DHSB_DROME (P21914) Succinate dehydrogenase [ubiquinone] iron-sulfur protein,|
           mitochondrial precursor (EC 1.3.5.1) (IP)
          Length = 297

 Score = 81.6 bits (200), Expect = 7e-16
 Identities = 37/61 (60%), Positives = 43/61 (70%)
 Frame = -2

Query: 428 LLHANRWIQDSRDEFTKERLDSINDEFKLYRCHTIKNCTHACPKGLNPAKQIDTIKKLQL 249
           L+ A RWI DSRDE + ERL+ + D F +YRCHTI NCT  CPKGLNP + I  IKKL  
Sbjct: 221 LMQAYRWIIDSRDENSAERLNKLKDPFSVYRCHTIMNCTRTCPKGLNPGRAIAEIKKLLS 280

Query: 248 G 246
           G
Sbjct: 281 G 281

to top

>DHSB_RECAM (P80480) Succinate dehydrogenase [ubiquinone] iron-sulfur protein|
           (EC 1.3.5.1) (IP)
          Length = 239

 Score = 79.7 bits (195), Expect = 3e-15
 Identities = 37/57 (64%), Positives = 42/57 (73%)
 Frame = -2

Query: 428 LLHANRWIQDSRDEFTKERLDSINDEFKLYRCHTIKNCTHACPKGLNPAKQIDTIKK 258
           LL A RWI DSRD+ T+ERL  + D FKLYRCHTI NCT  CPK LNPA+ I  IK+
Sbjct: 177 LLQAYRWIVDSRDQGTRERLQYLEDPFKLYRCHTILNCTKTCPKHLNPAQAIAKIKQ 233

to top

>DHSB_CYACA (P48933) Succinate dehydrogenase [ubiquinone] iron-sulfur protein|
           (EC 1.3.5.1) (IP)
          Length = 262

 Score = 79.0 bits (193), Expect = 5e-15
 Identities = 40/68 (58%), Positives = 45/68 (66%)
 Frame = -2

Query: 428 LLHANRWIQDSRDEFTKERLDSINDEFKLYRCHTIKNCTHACPKGLNPAKQIDTIKKLQL 249
           LL A RWI DSRD+ T  RL S+ D +KLYRCHTI NCT  CPK LNP K I +IKK  L
Sbjct: 190 LLQAYRWIVDSRDDNTLSRLLSLKDSYKLYRCHTIMNCTKTCPKHLNPGKVIASIKKRLL 249

Query: 248 GA*V*AEQ 225
              V  E+
Sbjct: 250 NLEVLGEK 257

to top

>DHSB_MYCGR (O42772) Succinate dehydrogenase [ubiquinone] iron-sulfur protein,|
           mitochondrial precursor (EC 1.3.5.1) (IP)
          Length = 297

 Score = 78.2 bits (191), Expect = 8e-15
 Identities = 35/57 (61%), Positives = 41/57 (71%)
 Frame = -2

Query: 428 LLHANRWIQDSRDEFTKERLDSINDEFKLYRCHTIKNCTHACPKGLNPAKQIDTIKK 258
           LL + RWI DSRDE T +R D++N+   LYRCHTI NC+  CPKGLNPA  I  IKK
Sbjct: 235 LLQSYRWINDSRDEKTAQRKDALNNSMSLYRCHTILNCSRTCPKGLNPALAIAEIKK 291

to top

>DHSB_CAEEL (Q09545) Putative succinate dehydrogenase [ubiquinone] iron-sulfur|
           protein, mitochondrial precursor (EC 1.3.5.1) (IP) (IP
           subunit of complex II)
          Length = 298

 Score = 75.9 bits (185), Expect = 4e-14
 Identities = 33/61 (54%), Positives = 41/61 (67%)
 Frame = -2

Query: 428 LLHANRWIQDSRDEFTKERLDSINDEFKLYRCHTIKNCTHACPKGLNPAKQIDTIKKLQL 249
           L+ A RW+ DSRD++  ERL  ++D F  ++CHTI NCT  CPK LNPAK I  IK L  
Sbjct: 226 LMQAYRWVIDSRDDYATERLHRMHDSFSAFKCHTIMNCTKTCPKHLNPAKAIGEIKSLLT 285

Query: 248 G 246
           G
Sbjct: 286 G 286

to top

>DHSB_USTMA (P32420) Succinate dehydrogenase [ubiquinone] iron-sulfur protein,|
           mitochondrial precursor (EC 1.3.5.1) (IP)
          Length = 295

 Score = 74.7 bits (182), Expect = 9e-14
 Identities = 32/57 (56%), Positives = 39/57 (68%)
 Frame = -2

Query: 428 LLHANRWIQDSRDEFTKERLDSINDEFKLYRCHTIKNCTHACPKGLNPAKQIDTIKK 258
           L+ A RW+ DSRD+F +ER   + + F LYRCHTI NC+  CPK LNP K I  IKK
Sbjct: 221 LMQAYRWMADSRDDFGEERRQKLENTFSLYRCHTIMNCSRTCPKNLNPGKAIAQIKK 277

to top

>DHSB_CANGA (Q6FWS8) Succinate dehydrogenase [ubiquinone] iron-sulfur protein,|
           mitochondrial precursor (EC 1.3.5.1) (IP)
          Length = 253

 Score = 73.6 bits (179), Expect = 2e-13
 Identities = 32/57 (56%), Positives = 38/57 (66%)
 Frame = -2

Query: 428 LLHANRWIQDSRDEFTKERLDSINDEFKLYRCHTIKNCTHACPKGLNPAKQIDTIKK 258
           L+ A RW+ DSRD+ TK R   + +   LYRCHTI NCT  CPKGLNP + I  IKK
Sbjct: 192 LMQAYRWLIDSRDQATKARRTMLQNSMSLYRCHTIMNCTRTCPKGLNPGRSIAEIKK 248

to top

>DHSB_YEAST (P21801) Succinate dehydrogenase [ubiquinone] iron-sulfur protein,|
           mitochondrial precursor (EC 1.3.5.1) (IP)
          Length = 266

 Score = 73.6 bits (179), Expect = 2e-13
 Identities = 33/57 (57%), Positives = 38/57 (66%)
 Frame = -2

Query: 428 LLHANRWIQDSRDEFTKERLDSINDEFKLYRCHTIKNCTHACPKGLNPAKQIDTIKK 258
           L+ A RW+ DSRD+ TK R   +N+   LYRCHTI NCT  CPKGLNP   I  IKK
Sbjct: 205 LMQAYRWLIDSRDQATKTRKAMLNNSMSLYRCHTIMNCTRTCPKGLNPGLAIAEIKK 261

to top

>DHSB_CHOCR (P48932) Succinate dehydrogenase [ubiquinone] iron-sulfur protein|
           (EC 1.3.5.1) (IP)
          Length = 250

 Score = 73.6 bits (179), Expect = 2e-13
 Identities = 32/56 (57%), Positives = 41/56 (73%)
 Frame = -2

Query: 428 LLHANRWIQDSRDEFTKERLDSINDEFKLYRCHTIKNCTHACPKGLNPAKQIDTIK 261
           LL A RWI DSRD  T+ RL+ +N++ +L+RCHTI NC+  CPK LNP K I +IK
Sbjct: 189 LLQAYRWIVDSRDNSTENRLNFLNNKMRLFRCHTIMNCSKTCPKSLNPGKAIASIK 244

to top

>DHSB_UROFA (Q70KF8) Succinate dehydrogenase [ubiquinone] iron-sulfur protein,|
           mitochondrial precursor (EC 1.3.5.1) (IP)
          Length = 283

 Score = 73.6 bits (179), Expect = 2e-13
 Identities = 31/57 (54%), Positives = 40/57 (70%)
 Frame = -2

Query: 428 LLHANRWIQDSRDEFTKERLDSINDEFKLYRCHTIKNCTHACPKGLNPAKQIDTIKK 258
           L+ A RW+ DSRD + ++R + + +   LYRCHTI NCT  CPKGLNPAK I  IK+
Sbjct: 222 LMQAYRWMADSRDSYGEDRKEKLQNTLSLYRCHTIFNCTKTCPKGLNPAKAISHIKR 278

to top

>DHSB_SCHPO (P21911) Succinate dehydrogenase [ubiquinone] iron-sulfur protein,|
           mitochondrial precursor (EC 1.3.5.1) (IP)
          Length = 252

 Score = 71.2 bits (173), Expect = 9e-13
 Identities = 32/62 (51%), Positives = 39/62 (62%)
 Frame = -2

Query: 428 LLHANRWIQDSRDEFTKERLDSINDEFKLYRCHTIKNCTHACPKGLNPAKQIDTIKKLQL 249
           L+ A RWI DSRD+ T +RLD + +   +YRCHTI NC   CPKGLNP   I  +K L  
Sbjct: 191 LMQAYRWIIDSRDQATAKRLDVMQNSMSVYRCHTIMNCARTCPKGLNPGLAIAKVKALMA 250

Query: 248 GA 243
            A
Sbjct: 251 TA 252

to top

>DHSB_PORPU (P80477) Succinate dehydrogenase [ubiquinone] iron-sulfur protein|
           (EC 1.3.5.1) (IP)
          Length = 239

 Score = 69.7 bits (169), Expect = 3e-12
 Identities = 31/56 (55%), Positives = 38/56 (67%)
 Frame = -2

Query: 428 LLHANRWIQDSRDEFTKERLDSINDEFKLYRCHTIKNCTHACPKGLNPAKQIDTIK 261
           LL A RW+ DSRD   KERL  +  + KL++CHTI NC+  CPK LNP K I +IK
Sbjct: 178 LLQAYRWLADSRDTNAKERLKLLGGKSKLFKCHTIMNCSRTCPKSLNPGKAIASIK 233

to top

>DHSB_ECOLI (P07014) Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)|
          Length = 238

 Score = 68.6 bits (166), Expect = 6e-12
 Identities = 31/60 (51%), Positives = 40/60 (66%)
 Frame = -2

Query: 428 LLHANRWIQDSRDEFTKERLDSINDEFKLYRCHTIKNCTHACPKGLNPAKQIDTIKKLQL 249
           LL A R++ DSRD  T  RLD ++D F ++RCH+I NC   CPKGLNP + I  IK + L
Sbjct: 175 LLAAYRFLIDSRDTETDSRLDGLSDAFSVFRCHSIMNCVSVCPKGLNPTRAIGHIKSMLL 234

to top

>DHSB_ASHGO (Q75CI4) Succinate dehydrogenase [ubiquinone] iron-sulfur protein,|
           mitochondrial precursor (EC 1.3.5.1) (IP)
          Length = 261

 Score = 67.4 bits (163), Expect = 1e-11
 Identities = 30/57 (52%), Positives = 36/57 (63%)
 Frame = -2

Query: 428 LLHANRWIQDSRDEFTKERLDSINDEFKLYRCHTIKNCTHACPKGLNPAKQIDTIKK 258
           L+ A RW+ DSRD     R + + +   +YRCHTI NCT  CPKGLNP K I  IKK
Sbjct: 200 LMQAYRWMVDSRDGAGAGRREQLQNAMSVYRCHTIMNCTRTCPKGLNPGKAIAEIKK 256

to top

>DHSB_SALTY (Q8ZQU2) Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)|
          Length = 238

 Score = 66.6 bits (161), Expect = 2e-11
 Identities = 30/60 (50%), Positives = 40/60 (66%)
 Frame = -2

Query: 428 LLHANRWIQDSRDEFTKERLDSINDEFKLYRCHTIKNCTHACPKGLNPAKQIDTIKKLQL 249
           LL A R++ DSRD  T  RL+ ++D F ++RCH+I NC   CPKGLNP + I  IK + L
Sbjct: 175 LLAAYRFLIDSRDTETDSRLEGMSDAFSVFRCHSIMNCVSVCPKGLNPTRAIGHIKSMLL 234

to top

>DHSB_COXBU (P51053) Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)|
          Length = 235

 Score = 63.5 bits (153), Expect = 2e-10
 Identities = 29/56 (51%), Positives = 38/56 (67%)
 Frame = -2

Query: 428 LLHANRWIQDSRDEFTKERLDSINDEFKLYRCHTIKNCTHACPKGLNPAKQIDTIK 261
           LL + R+I DSRD   KERLD++ D + ++RC TI +C   CPK LNPAK I  I+
Sbjct: 169 LLWSYRFIADSRDSKEKERLDAMKDPYSVFRCRTIMDCATVCPKNLNPAKAIRKIR 224

to top

>DHSB_RAT (P21913) Succinate dehydrogenase [ubiquinone] iron-sulfur protein|
           (EC 1.3.5.1) (Ip) (Iron-sulfur subunit of complex II)
           (Fragment)
          Length = 143

 Score = 57.8 bits (138), Expect = 1e-08
 Identities = 24/38 (63%), Positives = 29/38 (76%)
 Frame = -2

Query: 428 LLHANRWIQDSRDEFTKERLDSINDEFKLYRCHTIKNC 315
           L+ A RW+ DSRD+FT+ERL  + D F LYRCHTI NC
Sbjct: 106 LMQAYRWMIDSRDDFTEERLAKLQDPFSLYRCHTIMNC 143

to top

>FRDB_SHIFL (P0AC50) Fumarate reductase iron-sulfur protein (EC 1.3.99.1)|
          Length = 243

 Score = 42.4 bits (98), Expect = 5e-04
 Identities = 18/49 (36%), Positives = 30/49 (61%)
 Frame = -2

Query: 419 ANRWIQDSRDEFTKERLDSINDEFKLYRCHTIKNCTHACPKGLNPAKQI 273
           A+R+ +DSRD   KER+  +N +  ++ C  +  C+  CPK ++PA  I
Sbjct: 176 AHRYNEDSRDHGKKERMAQLNSQNGVWSCTFVGYCSEVCPKHVDPAAAI 224

to top

>FRDB_ECOLI (P0AC47) Fumarate reductase iron-sulfur protein (EC 1.3.99.1)|
          Length = 243

 Score = 42.4 bits (98), Expect = 5e-04
 Identities = 18/49 (36%), Positives = 30/49 (61%)
 Frame = -2

Query: 419 ANRWIQDSRDEFTKERLDSINDEFKLYRCHTIKNCTHACPKGLNPAKQI 273
           A+R+ +DSRD   KER+  +N +  ++ C  +  C+  CPK ++PA  I
Sbjct: 176 AHRYNEDSRDHGKKERMAQLNSQNGVWSCTFVGYCSEVCPKHVDPAAAI 224

to top

>FRDB_ECOL6 (P0AC48) Fumarate reductase iron-sulfur protein (EC 1.3.99.1)|
          Length = 243

 Score = 42.4 bits (98), Expect = 5e-04
 Identities = 18/49 (36%), Positives = 30/49 (61%)
 Frame = -2

Query: 419 ANRWIQDSRDEFTKERLDSINDEFKLYRCHTIKNCTHACPKGLNPAKQI 273
           A+R+ +DSRD   KER+  +N +  ++ C  +  C+  CPK ++PA  I
Sbjct: 176 AHRYNEDSRDHGKKERMAQLNSQNGVWSCTFVGYCSEVCPKHVDPAAAI 224

to top

>FRDB_ECO57 (P0AC49) Fumarate reductase iron-sulfur protein (EC 1.3.99.1)|
          Length = 243

 Score = 42.4 bits (98), Expect = 5e-04
 Identities = 18/49 (36%), Positives = 30/49 (61%)
 Frame = -2

Query: 419 ANRWIQDSRDEFTKERLDSINDEFKLYRCHTIKNCTHACPKGLNPAKQI 273
           A+R+ +DSRD   KER+  +N +  ++ C  +  C+  CPK ++PA  I
Sbjct: 176 AHRYNEDSRDHGKKERMAQLNSQNGVWSCTFVGYCSEVCPKHVDPAAAI 224

to top

>FRDB_PROVU (P20921) Fumarate reductase iron-sulfur protein (EC 1.3.99.1)|
          Length = 244

 Score = 42.4 bits (98), Expect = 5e-04
 Identities = 19/49 (38%), Positives = 28/49 (57%)
 Frame = -2

Query: 419 ANRWIQDSRDEFTKERLDSINDEFKLYRCHTIKNCTHACPKGLNPAKQI 273
           A R+  DSRD   KER+  +N E  ++ C  +  C+  CPK ++PA  I
Sbjct: 177 AQRYNTDSRDHGAKERMPQLNGENGVWSCTFVGYCSEVCPKHVDPAAAI 225

to top

>FRDB_MYCTU (Q10761) Fumarate reductase iron-sulfur protein (EC 1.3.99.1)|
          Length = 247

 Score = 37.4 bits (85), Expect = 0.015
 Identities = 18/51 (35%), Positives = 27/51 (52%)
 Frame = -2

Query: 413 RWIQDSRDEFTKERLDSINDEFKLYRCHTIKNCTHACPKGLNPAKQIDTIK 261
           R+  DSRD+   +R D +      + C  +  C+ ACPKG++PA  I   K
Sbjct: 179 RYNLDSRDQGAADRRDVLAAADGAWACTLVGECSTACPKGVDPAGAIQRYK 229

to top

>FRDB_HAEIN (P44893) Fumarate reductase iron-sulfur protein (EC 1.3.99.1)|
          Length = 256

 Score = 35.8 bits (81), Expect = 0.044
 Identities = 15/50 (30%), Positives = 29/50 (58%)
 Frame = -2

Query: 419 ANRWIQDSRDEFTKERLDSINDEFKLYRCHTIKNCTHACPKGLNPAKQID 270
           A+R+  D+RD    +R+  +N +  ++ C  +  C+  CPK ++PA  I+
Sbjct: 188 AHRYNLDNRDHGKAKRMSLLNGKNGVWSCTFVGYCSEVCPKHVDPASAIN 237

to top

>DHSB_BACSU (P08066) Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)|
          Length = 252

 Score = 33.1 bits (74), Expect = 0.29
 Identities = 13/29 (44%), Positives = 19/29 (65%)
 Frame = -2

Query: 377 ERLDSINDEFKLYRCHTIKNCTHACPKGL 291
           ERL+++ DE  L  C   +NC  +CPKG+
Sbjct: 197 ERLEALMDEGGLADCGNSQNCVQSCPKGI 225

to top

>REPA_BACSU (P13962) Protein repA|
          Length = 396

 Score = 31.2 bits (69), Expect = 1.1
 Identities = 16/50 (32%), Positives = 24/50 (48%)
 Frame = +3

Query: 75  KEQNLVAIIHSLHGIARRFHPLFVRVETMEQKQTKWQADYNFPTSPRGKT 224
           K +N++   + LH I R++ PL        +K   W  DYN  +   GKT
Sbjct: 106 KPKNIIVYEYPLHEIERKYKPL--------EKLRDWDKDYNSVSKELGKT 147

to top

>ITPR3_HUMAN (Q14573) Inositol 1,4,5-trisphosphate receptor type 3 (Type 3|
            inositol 1,4,5-trisphosphate receptor) (Type 3 InsP3
            receptor) (IP3 receptor isoform 3) (InsP3R3)
          Length = 2671

 Score = 30.4 bits (67), Expect = 1.9
 Identities = 14/44 (31%), Positives = 23/44 (52%)
 Frame = +3

Query: 294  PLGAGMRAVLDGVAAVQLELVVDGVKALLCELITAVLDPPVGME 425
            P+G G+      +AA Q  L  +G   L+C+LIT+  +  +  E
Sbjct: 1709 PIGTGLDPDWSAIAATQCRLDKEGATKLVCDLITSTKNEKIFQE 1752

to top

>ITPR3_BOVIN (Q8WN95) Inositol 1,4,5-trisphosphate receptor type 3 (Type 3|
            inositol 1,4,5-trisphosphate receptor) (Type 3 InsP3
            receptor) (IP3 receptor isoform 3) (InsP3R3)
          Length = 2664

 Score = 30.4 bits (67), Expect = 1.9
 Identities = 14/44 (31%), Positives = 23/44 (52%)
 Frame = +3

Query: 294  PLGAGMRAVLDGVAAVQLELVVDGVKALLCELITAVLDPPVGME 425
            P+G G+      +AA Q  L  +G   L+C+LIT+  +  +  E
Sbjct: 1702 PMGTGLDQDWSAIAATQCRLDKEGATKLVCDLITSTKNEKIFQE 1745

to top

>TRY2_ANOGA (P35036) Trypsin-2 precursor (EC 3.4.21.4)|
          Length = 277

 Score = 30.0 bits (66), Expect = 2.4
 Identities = 18/60 (30%), Positives = 26/60 (43%)
 Frame = -1

Query: 351 VQAVPLPHHQELHACLPQGAEPCKADRHNKEAAARSLSVSRAGSSPVEMSESCNQPAIWF 172
           VQ V LP H+E    +  G     +   N ++A  S    RA + P    E C+   +WF
Sbjct: 152 VQPVELPEHEEP---VEPGTMATVSGWGNTQSAVESSDFLRAANVPTVSHEDCSDAYMWF 208

to top

>ITPR3_MOUSE (P70227) Inositol 1,4,5-trisphosphate receptor type 3 (Type 3|
            inositol 1,4,5-trisphosphate receptor) (Type 3 InsP3
            receptor) (IP3 receptor isoform 3) (InsP3R3)
          Length = 2670

 Score = 29.6 bits (65), Expect = 3.2
 Identities = 14/44 (31%), Positives = 23/44 (52%)
 Frame = +3

Query: 294  PLGAGMRAVLDGVAAVQLELVVDGVKALLCELITAVLDPPVGME 425
            P G+G+      +AA Q  L  +G   L+C+LIT+  +  +  E
Sbjct: 1709 PTGSGLDQDWSAIAATQCRLDKEGATKLVCDLITSTKNEKIFQE 1752

to top

>IL1A_MACMU (P48089) Interleukin-1 alpha precursor (IL-1 alpha)|
           (Hematopoietin-1)
          Length = 271

 Score = 29.3 bits (64), Expect = 4.1
 Identities = 15/49 (30%), Positives = 26/49 (53%)
 Frame = -3

Query: 163 SMVSTLTNNGWKRLAIPCRE*IIATRFCSFRAVSSLVVHHILMLMHEVI 17
           S+  ++T+N  + +A    E II  R   F  +S++  H I ++ HE I
Sbjct: 87  SLSQSITDNNLEAIANDSEEEIIKPRSAPFSFLSNMTYHFIRIIKHEFI 135

to top

>IL1A_MACFA (P79340) Interleukin-1 alpha precursor (IL-1 alpha)|
           (Hematopoietin-1)
          Length = 271

 Score = 29.3 bits (64), Expect = 4.1
 Identities = 15/49 (30%), Positives = 26/49 (53%)
 Frame = -3

Query: 163 SMVSTLTNNGWKRLAIPCRE*IIATRFCSFRAVSSLVVHHILMLMHEVI 17
           S+  ++T+N  + +A    E II  R   F  +S++  H I ++ HE I
Sbjct: 87  SLSQSITDNNLEAIANDSEEEIIKPRSAPFSFLSNMTYHFIRIIKHEFI 135

to top

>ITPR3_RAT (Q63269) Inositol 1,4,5-trisphosphate receptor type 3 (Type 3|
            inositol 1,4,5-trisphosphate receptor) (Type 3 InsP3
            receptor) (IP3 receptor isoform 3) (InsP3R3) (IP3R-3)
          Length = 2670

 Score = 29.3 bits (64), Expect = 4.1
 Identities = 14/44 (31%), Positives = 23/44 (52%)
 Frame = +3

Query: 294  PLGAGMRAVLDGVAAVQLELVVDGVKALLCELITAVLDPPVGME 425
            P G+G+      +AA Q  L  +G   L+C+LIT+  +  +  E
Sbjct: 1709 PTGSGVDQDWSAIAATQCRLDKEGATKLVCDLITSTKNEKIFQE 1752

to top

>HGDA_ACIFE (P11569) (R)-2-hydroxyglutaryl-CoA dehydratase alpha-subunit (EC|
           4.2.1.-)
          Length = 476

 Score = 28.5 bits (62), Expect = 7.1
 Identities = 16/56 (28%), Positives = 23/56 (41%)
 Frame = +1

Query: 10  VYELLHA*ASKYDEPPN*IQHGKNKIW*QLFTPYTESPGVSIHYSSG*KPWSKNKP 177
           VY  L      Y + PN +   +   W +      +  GV +HY+   KPWS   P
Sbjct: 369 VYNNLDELVKAYCKAPNSVSIEQGVAWREGLIRDNKVDGVLVHYNRSCKPWSGYMP 424

to top

>FRDB_WOLSU (P17596) Fumarate reductase iron-sulfur protein (EC 1.3.99.1)|
          Length = 239

 Score = 28.5 bits (62), Expect = 7.1
 Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
 Frame = -2

Query: 413 RWIQDSRDEFTKERL-DSINDEFKLYRCHTIKNCTHACPKGLNPAKQIDTIKK 258
           R++ D  DE T E   + I D+  ++ C T+  C   CPK L    +I  +++
Sbjct: 181 RFMIDPHDERTDEDYYELIGDDDGVFGCMTLLACHDVCPKNLPLQSKIAYLRR 233

to top

>ASHH3_ARATH (Q945S8) Histone-lysine N-methyltransferase ASHH3 (EC 2.1.1.43)|
           (ASH1-homolog protein 3) (Protein SET DOMAIN GROUP 7)
          Length = 363

 Score = 28.5 bits (62), Expect = 7.1
 Identities = 17/70 (24%), Positives = 29/70 (41%), Gaps = 2/70 (2%)
 Frame = +1

Query: 202 RHLHGGRPCSAHTQAPSCSFFIVSICFAGFSPLGQACVQFLMVWQRYSLNSSLM--ESRR 375
           RH+  G+  +  +Q  +CS   + +      P    C   +  +  YS   S+M  +   
Sbjct: 291 RHIDAGKSWNNLSQRDTCSRNCIGVVIRLSRPTSDRCFGLVRHFDEYSRKHSVMFEDGVT 350

Query: 376 SFVNSSRLSW 405
            FV+ SR  W
Sbjct: 351 EFVDMSREDW 360

to top

>PRI2_NEUCR (Q8NIZ4) Probable DNA primase large subunit (EC 2.7.7.-)|
          Length = 513

 Score = 28.1 bits (61), Expect = 9.2
 Identities = 17/58 (29%), Positives = 25/58 (43%)
 Frame = +1

Query: 232 AHTQAPSCSFFIVSICFAGFSPLGQACVQFLMVWQRYSLNSSLMESRRSFVNSSRLSW 405
           A  Q    S FI+ + FA    L +   +   +  R  LN+     R +F+NS  L W
Sbjct: 107 AQRQKDHYSHFILRLAFASTEDLRRRFTRVETMLFRMRLNADDGRERAAFINSLNLDW 164

to top

>Y4XL_RHISN (P55704) Hypothetical protein y4xL|
          Length = 338

 Score = 28.1 bits (61), Expect = 9.2
 Identities = 20/61 (32%), Positives = 28/61 (45%), Gaps = 4/61 (6%)
 Frame = -1

Query: 366 LHQRRVQAVPLPHHQELHACLPQGAEPCKADRHNKEAAAR----SLSVSRAGSSPVEMSE 199
           L+ R  +  P P  Q  HA + QGA     D+H + A  R     +  SR+G S   +S 
Sbjct: 81  LYTRTRERSPHPSEQRPHARVLQGAPEHDQDQHLEAAGPREGSWQVGPSRSGPSQAGLSP 140

Query: 198 S 196
           S
Sbjct: 141 S 141

to top

>BBS2_MOUSE (Q9CWF6) Bardet-Biedl syndrome 2 protein homolog|
          Length = 721

 Score = 28.1 bits (61), Expect = 9.2
 Identities = 15/56 (26%), Positives = 23/56 (41%)
 Frame = -1

Query: 363 HQRRVQAVPLPHHQELHACLPQGAEPCKADRHNKEAAARSLSVSRAGSSPVEMSES 196
           H+   + V +  +   H CL    +  K   HN    ++  S SR   SP+E   S
Sbjct: 12  HKISPRMVAIGRYDGTHPCLAAATQAGKVFIHNPHTRSQHFSASRVFQSPLESDVS 67

to top

>HDRC_METAC (Q8TIB9) CoB--CoM heterodisulfide reductase 1 iron-sulfur subunit C|
           (EC 1.8.98.1)
          Length = 161

 Score = 28.1 bits (61), Expect = 9.2
 Identities = 17/57 (29%), Positives = 29/57 (50%)
 Frame = -2

Query: 425 LHANRWIQDSRDEFTKERLDSINDEFKLYRCHTIKNCTHACPKGLNPAKQIDTIKKL 255
           L+  R I+D+R    K R   ++D + L+ C T   C   CP+G+     I  +++L
Sbjct: 37  LNTRRIIRDAR----KNRAAVLSD-YDLWLCTTCYTCQERCPRGIPITDAILELRRL 88

to top

>NFAT5_HUMAN (O94916) Nuclear factor of activated T-cells 5 (T-cell|
           transcription factor NFAT5) (NF-AT5)
           (Tonicity-responsive enhancer-binding protein)
           (TonE-binding protein) (TonEBP)
          Length = 1531

 Score = 28.1 bits (61), Expect = 9.2
 Identities = 14/35 (40%), Positives = 20/35 (57%)
 Frame = +2

Query: 53  HQTRYSTERTKSGSNYSLPTRNRQAFPSIIRQGRN 157
           H+ RY TE    GS  S+  R +Q FP++  +G N
Sbjct: 292 HRARYLTE----GSRGSVKDRTQQGFPTVKLEGHN 322

to top

>CLCL_RALSO (Q8XTT4) Putative chloride channel protein clcB-like|
          Length = 429

 Score = 28.1 bits (61), Expect = 9.2
 Identities = 23/61 (37%), Positives = 27/61 (44%)
 Frame = +3

Query: 222 TLLCSHSGSELQLLYCVDLLCRVQPLGAGMRAVLDGVAAVQLELVVDGVKALLCELITAV 401
           TL C   G+ L LLY           G GM A+L G A V +   V G+ ALL     A 
Sbjct: 324 TLFC---GAALGLLY-----------GTGMHALLPGAAPVPVSYAVVGMGALLAATTHAP 369

Query: 402 L 404
           L
Sbjct: 370 L 370

to top

>NFAT5_MOUSE (Q9WV30) Nuclear factor of activated T-cells 5 (T cell|
           transcription factor NFAT5) (NF-AT5) (Rel
           domain-containing transcription factor NFAT5)
          Length = 1225

 Score = 28.1 bits (61), Expect = 9.2
 Identities = 14/35 (40%), Positives = 20/35 (57%)
 Frame = +2

Query: 53  HQTRYSTERTKSGSNYSLPTRNRQAFPSIIRQGRN 157
           H+ RY TE    GS  S+  R +Q FP++  +G N
Sbjct: 292 HRARYLTE----GSRGSVKDRTQQGFPTVKLEGHN 322

to top

>HIS4_COLP3 (Q47XB4) 1-(5-phosphoribosyl)-5-[(5-|
           phosphoribosylamino)methylideneamino]
           imidazole-4-carboxamide isomerase (EC 5.3.1.16)
           (Phosphoribosylformimino-5-aminoimidazole carboxamide
           ribotide isomerase)
          Length = 261

 Score = 28.1 bits (61), Expect = 9.2
 Identities = 19/47 (40%), Positives = 24/47 (51%)
 Frame = +3

Query: 267 CVDLLCRVQPLGAGMRAVLDGVAAVQLELVVDGVKALLCELITAVLD 407
           C D + ++  LGA  R V+  +A  Q ELV   VK   CE I   LD
Sbjct: 84  CEDDVKQLLALGAD-RVVIGSLAIKQPELVTQWVKTYGCEKIVLALD 129


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 65,773,883
Number of Sequences: 219361
Number of extensions: 1389343
Number of successful extensions: 3980
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 3882
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3980
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2395157885
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

to top

full-length cDNA and EST

Clone Information

BLAST Search Result