ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart23b12
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1XIP1_WHEAT (Q8L5C6) Xylanase inhibitor protein 1 precursor (Clas... 74 9e-14
2XIP1_ORYSA (Q7GCM7) Xylanase inhibitor protein 1 precursor (Clas... 57 1e-08
3XIP2_ORYSA (Q53NL5) Xylanase inhibitor protein 2 precursor (Clas... 53 2e-07
4CHLY_HEVBR (P23472) Hevamine-A precursor [Includes: Chitinase (E... 49 4e-06
5CHIA_ARATH (P19172) Acidic endochitinase precursor (EC 3.2.1.14) 46 3e-05
6CHIT3_VITVI (P51614) Acidic endochitinase precursor (EC 3.2.1.14) 44 1e-04
7CHIA_CICAR (P36908) Acidic endochitinase precursor (EC 3.2.1.14) 44 1e-04
8CHIA_PHAAN (P29024) Acidic endochitinase precursor (EC 3.2.1.14) 43 2e-04
9CHIB_TOBAC (P29061) Basic endochitinase precursor (EC 3.2.1.14) 41 6e-04
10CHIE_BETVU (P36910) Acidic endochitinase SE2 precursor (EC 3.2.1... 39 0.003
11CHIA_CUCSA (P17541) Acidic endochitinase precursor (EC 3.2.1.14) 37 0.012
12CHIA_TOBAC (P29060) Acidic endochitinase precursor (EC 3.2.1.14) 36 0.021
13CONB_CANEN (P49347) Concanavalin B precursor (Con B) 36 0.027
14CHIT_YEAST (P29029) Endochitinase precursor (EC 3.2.1.14) (Solub... 30 1.1
15HIS8_GEOMG (Q39YP6) Histidinol-phosphate aminotransferase (EC 2.... 30 1.5
16VGLE_VZVD (P09259) Glycoprotein E precursor (Glycoprotein GI) 29 3.3
17SFB3_YEAST (P38810) SED5-binding protein 3 (SEC24-related protei... 29 3.3
18MLL2_HUMAN (O14686) Myeloid/lymphoid or mixed-lineage leukemia p... 28 4.3
19FIMC_BORPE (P33410) Outer membrane usher protein fimC precursor 28 4.3
20SP1_HORSE (P81121) Seminal plasma protein HSP-1 28 5.6
21FLO5_YEAST (P38894) Flocculation protein FLO5 precursor (Floccul... 28 7.3
22LDLR1_XENLA (Q99087) Low-density lipoprotein receptor 1 precurso... 27 9.5
23NFASC_CHICK (O42414) Neurofascin precursor 27 9.5
24CHI2_CANAL (P40953) Chitinase 2 precursor (EC 3.2.1.14) 27 9.5

>XIP1_WHEAT (Q8L5C6) Xylanase inhibitor protein 1 precursor (Class III|
           chitinase homolog) (XIP-I protein)
          Length = 304

 Score = 73.9 bits (180), Expect = 9e-14
 Identities = 31/53 (58%), Positives = 41/53 (77%)
 Frame = -3

Query: 347 QIYLGLPASEQKVGYVHPKNLYYGVIQVVQKAANYGGVMVWERYEDKRTNYSS 189
           + Y+GL A ++   +VHPKN+YYGV  V QK  NYGG+M+W+RY DK+TNYSS
Sbjct: 246 RFYVGLTADDKSHQWVHPKNVYYGVAPVAQKKDNYGGIMLWDRYFDKQTNYSS 298



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>XIP1_ORYSA (Q7GCM7) Xylanase inhibitor protein 1 precursor (Class III|
           chitinase homolog a) (RIXI protein)
          Length = 304

 Score = 57.0 bits (136), Expect = 1e-08
 Identities = 28/60 (46%), Positives = 37/60 (61%), Gaps = 2/60 (3%)
 Frame = -3

Query: 344 IYLGLPASEQ--KVGYVHPKNLYYGVIQVVQKAANYGGVMVWERYEDKRTNYSSYAIQWA 171
           +YLGL A+    K   V  K LYY ++  VQKA NYGG+M+W+R+ DK+T Y      WA
Sbjct: 245 VYLGLAAANVPGKNDNVFIKQLYYDLLPNVQKAKNYGGIMLWDRFYDKQTGYGKTVKYWA 304



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>XIP2_ORYSA (Q53NL5) Xylanase inhibitor protein 2 precursor (Class III|
           chitinase homolog h)
          Length = 290

 Score = 52.8 bits (125), Expect = 2e-07
 Identities = 23/53 (43%), Positives = 38/53 (71%), Gaps = 1/53 (1%)
 Frame = -3

Query: 347 QIYLGLPAS-EQKVGYVHPKNLYYGVIQVVQKAANYGGVMVWERYEDKRTNYS 192
           ++Y+GL AS EQ   ++  K+LYY ++Q V+   NYGG+ +++RY DK+ NY+
Sbjct: 235 KVYIGLVASPEQDSAWMFQKDLYYEMLQFVRSLPNYGGLAIYDRYFDKKANYT 287



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>CHLY_HEVBR (P23472) Hevamine-A precursor [Includes: Chitinase (EC 3.2.1.14);|
           Lysozyme (EC 3.2.1.17)]
          Length = 311

 Score = 48.5 bits (114), Expect = 4e-06
 Identities = 22/55 (40%), Positives = 35/55 (63%), Gaps = 2/55 (3%)
 Frame = -3

Query: 347 QIYLGLPASEQKVG--YVHPKNLYYGVIQVVQKAANYGGVMVWERYEDKRTNYSS 189
           +I+LGLPA+ +  G  YV P  L   ++  ++K+  YGGVM+W ++ D +  YSS
Sbjct: 239 KIFLGLPAAPEAAGSGYVPPDVLISRILPEIKKSPKYGGVMLWSKFYDDKNGYSS 293



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>CHIA_ARATH (P19172) Acidic endochitinase precursor (EC 3.2.1.14)|
          Length = 302

 Score = 45.8 bits (107), Expect = 3e-05
 Identities = 20/55 (36%), Positives = 34/55 (61%), Gaps = 2/55 (3%)
 Frame = -3

Query: 347 QIYLGLPASEQKVG--YVHPKNLYYGVIQVVQKAANYGGVMVWERYEDKRTNYSS 189
           + +LGLPA+ +  G  Y+ P  L   ++  ++K+  YGGVM+W ++ D +  YSS
Sbjct: 242 KFFLGLPAAPEAAGSGYIPPDVLTSQILPTLKKSRKYGGVMLWSKFWDDKNGYSS 296



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>CHIT3_VITVI (P51614) Acidic endochitinase precursor (EC 3.2.1.14)|
          Length = 301

 Score = 43.9 bits (102), Expect = 1e-04
 Identities = 19/53 (35%), Positives = 33/53 (62%), Gaps = 2/53 (3%)
 Frame = -3

Query: 341 YLGLPASEQKVG--YVHPKNLYYGVIQVVQKAANYGGVMVWERYEDKRTNYSS 189
           ++GLPAS    G  ++    L   ++ V++++  YGGVM+W +Y D ++ YSS
Sbjct: 243 FMGLPASSAAAGRGFIPANVLTSQILPVIKRSPKYGGVMLWSKYYDDQSGYSS 295



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>CHIA_CICAR (P36908) Acidic endochitinase precursor (EC 3.2.1.14)|
          Length = 293

 Score = 43.5 bits (101), Expect = 1e-04
 Identities = 19/56 (33%), Positives = 34/56 (60%), Gaps = 3/56 (5%)
 Frame = -3

Query: 347 QIYLGLPASEQKV---GYVHPKNLYYGVIQVVQKAANYGGVMVWERYEDKRTNYSS 189
           Q++LG+PAS+      G +    L   V+  ++ +  YGGVM+W+R+ D ++ YS+
Sbjct: 232 QVFLGVPASDAAAPSGGLIPADVLTSQVLPAIKTSPKYGGVMIWDRFNDAQSGYSN 287



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>CHIA_PHAAN (P29024) Acidic endochitinase precursor (EC 3.2.1.14)|
          Length = 298

 Score = 43.1 bits (100), Expect = 2e-04
 Identities = 20/58 (34%), Positives = 35/58 (60%), Gaps = 2/58 (3%)
 Frame = -3

Query: 347 QIYLGLPASEQKVG--YVHPKNLYYGVIQVVQKAANYGGVMVWERYEDKRTNYSSYAI 180
           Q++LG+PAS    G  ++    L   V+  ++ ++ YGGVM+W+R+ D ++ YS   I
Sbjct: 238 QLFLGVPASTAAAGSGFIPADVLTSQVLPTIKGSSKYGGVMLWDRFNDGQSGYSGAII 295



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>CHIB_TOBAC (P29061) Basic endochitinase precursor (EC 3.2.1.14)|
          Length = 294

 Score = 41.2 bits (95), Expect = 6e-04
 Identities = 20/55 (36%), Positives = 34/55 (61%), Gaps = 2/55 (3%)
 Frame = -3

Query: 347 QIYLGLPASEQKVG--YVHPKNLYYGVIQVVQKAANYGGVMVWERYEDKRTNYSS 189
           ++Y+GLPA++   G  Y+  + L   V+  ++ ++ YGGVM+W R  D +  YSS
Sbjct: 234 KLYIGLPAAKTAAGNGYIPKQVLMSQVLPFLKGSSKYGGVMLWNRKFDVQCGYSS 288



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>CHIE_BETVU (P36910) Acidic endochitinase SE2 precursor (EC 3.2.1.14)|
          Length = 293

 Score = 38.9 bits (89), Expect = 0.003
 Identities = 22/55 (40%), Positives = 32/55 (58%), Gaps = 2/55 (3%)
 Frame = -3

Query: 347 QIYLGLPASEQKVG--YVHPKNLYYGVIQVVQKAANYGGVMVWERYEDKRTNYSS 189
           QI+LGLPAS    G  ++    L   V+  ++ +A YGGVM+W +  D  + YSS
Sbjct: 235 QIFLGLPASTDAAGSGFIPADALTSQVLPTIKGSAKYGGVMLWSKAYD--SGYSS 287



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>CHIA_CUCSA (P17541) Acidic endochitinase precursor (EC 3.2.1.14)|
          Length = 292

 Score = 37.0 bits (84), Expect = 0.012
 Identities = 16/49 (32%), Positives = 30/49 (61%), Gaps = 3/49 (6%)
 Frame = -3

Query: 347 QIYLGLPASEQKV---GYVHPKNLYYGVIQVVQKAANYGGVMVWERYED 210
           ++Y+GLPA+ +     G++    L   V+  ++ ++NYGGVM+W +  D
Sbjct: 232 KLYMGLPAAREAAPSGGFIPADVLISQVLPTIKASSNYGGVMLWSKAFD 280



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>CHIA_TOBAC (P29060) Acidic endochitinase precursor (EC 3.2.1.14)|
          Length = 291

 Score = 36.2 bits (82), Expect = 0.021
 Identities = 19/55 (34%), Positives = 32/55 (58%), Gaps = 2/55 (3%)
 Frame = -3

Query: 347 QIYLGLPASEQKVG--YVHPKNLYYGVIQVVQKAANYGGVMVWERYEDKRTNYSS 189
           +I+LGLPA++   G  ++    L   V+ ++  +  YGGVM+W ++ D    YSS
Sbjct: 233 KIFLGLPAAQGAAGSGFIPSDVLVSQVLPLINGSPKYGGVMLWSKFYD--NGYSS 285



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>CONB_CANEN (P49347) Concanavalin B precursor (Con B)|
          Length = 324

 Score = 35.8 bits (81), Expect = 0.027
 Identities = 20/61 (32%), Positives = 31/61 (50%), Gaps = 4/61 (6%)
 Frame = -3

Query: 344 IYLGLPASEQKV---GYVHPKNLYYGVIQVVQKA-ANYGGVMVWERYEDKRTNYSSYAIQ 177
           ++L LPAS+      GY+ P  L   V+  +      Y G+ +W R  DK T YS+  I+
Sbjct: 247 LFLELPASQATAPGGGYIPPSALIGQVLPYLPDLQTRYAGIALWNRQADKETGYSTNIIR 306

Query: 176 W 174
           +
Sbjct: 307 Y 307



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>CHIT_YEAST (P29029) Endochitinase precursor (EC 3.2.1.14) (Soluble cell wall|
           protein 2)
          Length = 562

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 12/44 (27%), Positives = 25/44 (56%), Gaps = 2/44 (4%)
 Frame = -3

Query: 347 QIYLGLPASEQKVG--YVHPKNLYYGVIQVVQKAANYGGVMVWE 222
           +++LGLP S    G  Y+   +L    I  +  ++++GG+ +W+
Sbjct: 243 KLFLGLPGSASAAGSGYISDTSLLESTIADIASSSSFGGIALWD 286



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>HIS8_GEOMG (Q39YP6) Histidinol-phosphate aminotransferase (EC 2.6.1.9)|
           (Imidazole acetol-phosphate transaminase)
          Length = 350

 Score = 30.0 bits (66), Expect = 1.5
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = -3

Query: 326 ASEQKVGYVHPKNLYYGVIQVVQKA 252
           A  +++GYVHP   YYG +  VQ A
Sbjct: 102 AEGEEIGYVHPSYSYYGTLAEVQGA 126



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>VGLE_VZVD (P09259) Glycoprotein E precursor (Glycoprotein GI)|
          Length = 623

 Score = 28.9 bits (63), Expect = 3.3
 Identities = 12/42 (28%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
 Frame = -3

Query: 296 PKNLYYGVIQVVQKAANYGGVMVWE-RYEDKRTNYSSYAIQW 174
           P  +  GV++V++    Y GV +W  R  D  + Y+++ + W
Sbjct: 278 PPEIEPGVLKVLRTEKQYLGVYIWNMRGSDGTSTYATFLVTW 319



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>SFB3_YEAST (P38810) SED5-binding protein 3 (SEC24-related protein 3) (Lethal|
           with SEC13 protein 1)
          Length = 929

 Score = 28.9 bits (63), Expect = 3.3
 Identities = 19/53 (35%), Positives = 24/53 (45%), Gaps = 8/53 (15%)
 Frame = -2

Query: 180 PMGLTLRRSDRHR--------VDLLYPSVYXXXXXXCLLPLQ*ISIASVKLCA 46
           PMG   +RSD +         VD L PS+Y       LLPL  + +  V L A
Sbjct: 257 PMGPNGQRSDLNEKSELLHGTVDFLVPSIYNAIQEKELLPLHYVFLIDVSLLA 309



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>MLL2_HUMAN (O14686) Myeloid/lymphoid or mixed-lineage leukemia protein 2|
            (ALL1-related protein)
          Length = 5262

 Score = 28.5 bits (62), Expect = 4.3
 Identities = 17/39 (43%), Positives = 20/39 (51%)
 Frame = -2

Query: 303  RSSKEPLLRRHTGGAEGGQLWRGHGLGTLRGQADKLQQL 187
            RSS  P  RR  GGA GG   RG G   L+  A  ++ L
Sbjct: 1029 RSSSFPGRRRPRGGAHGG---RGRGRARLKSTASSIETL 1064



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>FIMC_BORPE (P33410) Outer membrane usher protein fimC precursor|
          Length = 873

 Score = 28.5 bits (62), Expect = 4.3
 Identities = 14/35 (40%), Positives = 18/35 (51%)
 Frame = -1

Query: 298 IQRTSTTASYRWCRRRPTMAGSWSGNVTRTSGQIT 194
           +QR  T+A Y        + GSWSG     SGQ+T
Sbjct: 620 VQRAGTSAQY-------ALNGSWSGTYGEVSGQLT 647



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>SP1_HORSE (P81121) Seminal plasma protein HSP-1|
          Length = 120

 Score = 28.1 bits (61), Expect = 5.6
 Identities = 11/28 (39%), Positives = 14/28 (50%)
 Frame = -1

Query: 313 RSVTFIQRTSTTASYRWCRRRPTMAGSW 230
           R   +   T T + YRWC    T +GSW
Sbjct: 41  RGYRYYDCTRTDSFYRWCSLTGTYSGSW 68



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>FLO5_YEAST (P38894) Flocculation protein FLO5 precursor (Flocculin-5)|
          Length = 1075

 Score = 27.7 bits (60), Expect = 7.3
 Identities = 16/40 (40%), Positives = 20/40 (50%)
 Frame = -1

Query: 292 RTSTTASYRWCRRRPTMAGSWSGNVTRTSGQITAATPSNG 173
           RT TTAS       P     W+G  T TS ++T  T +NG
Sbjct: 313 RTPTTASTITTTTEP-----WTGTFTSTSTEMTTVTGTNG 347



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>LDLR1_XENLA (Q99087) Low-density lipoprotein receptor 1 precursor (LDL receptor|
           1)
          Length = 909

 Score = 27.3 bits (59), Expect = 9.5
 Identities = 12/34 (35%), Positives = 18/34 (52%)
 Frame = -3

Query: 299 HPKNLYYGVIQVVQKAANYGGVMVWERYEDKRTN 198
           HP  LY  +  V+     +GG +VW+ +  K TN
Sbjct: 834 HPTALYIVLPIVILCLVAFGGFLVWKNWRLKNTN 867



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>NFASC_CHICK (O42414) Neurofascin precursor|
          Length = 1369

 Score = 27.3 bits (59), Expect = 9.5
 Identities = 17/55 (30%), Positives = 24/55 (43%), Gaps = 3/55 (5%)
 Frame = -1

Query: 298  IQRTSTTASYRWCRRRPTMAGSWSGNVTRTSGQITAATP---SNGLDPPSLRSSP 143
            +QRT   + YR+  R  T  G     V  +   +  ATP   S  L PP+   +P
Sbjct: 1015 VQRTDPISRYRFFLRARTQVGDGEVIVEESPALLNEATPTPASTWLPPPTTELTP 1069



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>CHI2_CANAL (P40953) Chitinase 2 precursor (EC 3.2.1.14)|
          Length = 583

 Score = 27.3 bits (59), Expect = 9.5
 Identities = 11/42 (26%), Positives = 25/42 (59%)
 Frame = -3

Query: 347 QIYLGLPASEQKVGYVHPKNLYYGVIQVVQKAANYGGVMVWE 222
           ++++G+PA+    GYV    L    I+ ++  +++ GV +W+
Sbjct: 239 KLFVGVPATSNIAGYVDTSKL-SSAIEEIKCDSHFAGVSLWD 279


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 48,848,238
Number of Sequences: 219361
Number of extensions: 858329
Number of successful extensions: 2794
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 2705
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2793
length of database: 80,573,946
effective HSP length: 91
effective length of database: 60,612,095
effective search space used: 1454690280
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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