Clone Name | rbart23b12 |
---|---|
Clone Library Name | barley_pub |
>XIP1_WHEAT (Q8L5C6) Xylanase inhibitor protein 1 precursor (Class III| chitinase homolog) (XIP-I protein) Length = 304 Score = 73.9 bits (180), Expect = 9e-14 Identities = 31/53 (58%), Positives = 41/53 (77%) Frame = -3 Query: 347 QIYLGLPASEQKVGYVHPKNLYYGVIQVVQKAANYGGVMVWERYEDKRTNYSS 189 + Y+GL A ++ +VHPKN+YYGV V QK NYGG+M+W+RY DK+TNYSS Sbjct: 246 RFYVGLTADDKSHQWVHPKNVYYGVAPVAQKKDNYGGIMLWDRYFDKQTNYSS 298
>XIP1_ORYSA (Q7GCM7) Xylanase inhibitor protein 1 precursor (Class III| chitinase homolog a) (RIXI protein) Length = 304 Score = 57.0 bits (136), Expect = 1e-08 Identities = 28/60 (46%), Positives = 37/60 (61%), Gaps = 2/60 (3%) Frame = -3 Query: 344 IYLGLPASEQ--KVGYVHPKNLYYGVIQVVQKAANYGGVMVWERYEDKRTNYSSYAIQWA 171 +YLGL A+ K V K LYY ++ VQKA NYGG+M+W+R+ DK+T Y WA Sbjct: 245 VYLGLAAANVPGKNDNVFIKQLYYDLLPNVQKAKNYGGIMLWDRFYDKQTGYGKTVKYWA 304
>XIP2_ORYSA (Q53NL5) Xylanase inhibitor protein 2 precursor (Class III| chitinase homolog h) Length = 290 Score = 52.8 bits (125), Expect = 2e-07 Identities = 23/53 (43%), Positives = 38/53 (71%), Gaps = 1/53 (1%) Frame = -3 Query: 347 QIYLGLPAS-EQKVGYVHPKNLYYGVIQVVQKAANYGGVMVWERYEDKRTNYS 192 ++Y+GL AS EQ ++ K+LYY ++Q V+ NYGG+ +++RY DK+ NY+ Sbjct: 235 KVYIGLVASPEQDSAWMFQKDLYYEMLQFVRSLPNYGGLAIYDRYFDKKANYT 287
>CHLY_HEVBR (P23472) Hevamine-A precursor [Includes: Chitinase (EC 3.2.1.14);| Lysozyme (EC 3.2.1.17)] Length = 311 Score = 48.5 bits (114), Expect = 4e-06 Identities = 22/55 (40%), Positives = 35/55 (63%), Gaps = 2/55 (3%) Frame = -3 Query: 347 QIYLGLPASEQKVG--YVHPKNLYYGVIQVVQKAANYGGVMVWERYEDKRTNYSS 189 +I+LGLPA+ + G YV P L ++ ++K+ YGGVM+W ++ D + YSS Sbjct: 239 KIFLGLPAAPEAAGSGYVPPDVLISRILPEIKKSPKYGGVMLWSKFYDDKNGYSS 293
>CHIA_ARATH (P19172) Acidic endochitinase precursor (EC 3.2.1.14)| Length = 302 Score = 45.8 bits (107), Expect = 3e-05 Identities = 20/55 (36%), Positives = 34/55 (61%), Gaps = 2/55 (3%) Frame = -3 Query: 347 QIYLGLPASEQKVG--YVHPKNLYYGVIQVVQKAANYGGVMVWERYEDKRTNYSS 189 + +LGLPA+ + G Y+ P L ++ ++K+ YGGVM+W ++ D + YSS Sbjct: 242 KFFLGLPAAPEAAGSGYIPPDVLTSQILPTLKKSRKYGGVMLWSKFWDDKNGYSS 296
>CHIT3_VITVI (P51614) Acidic endochitinase precursor (EC 3.2.1.14)| Length = 301 Score = 43.9 bits (102), Expect = 1e-04 Identities = 19/53 (35%), Positives = 33/53 (62%), Gaps = 2/53 (3%) Frame = -3 Query: 341 YLGLPASEQKVG--YVHPKNLYYGVIQVVQKAANYGGVMVWERYEDKRTNYSS 189 ++GLPAS G ++ L ++ V++++ YGGVM+W +Y D ++ YSS Sbjct: 243 FMGLPASSAAAGRGFIPANVLTSQILPVIKRSPKYGGVMLWSKYYDDQSGYSS 295
>CHIA_CICAR (P36908) Acidic endochitinase precursor (EC 3.2.1.14)| Length = 293 Score = 43.5 bits (101), Expect = 1e-04 Identities = 19/56 (33%), Positives = 34/56 (60%), Gaps = 3/56 (5%) Frame = -3 Query: 347 QIYLGLPASEQKV---GYVHPKNLYYGVIQVVQKAANYGGVMVWERYEDKRTNYSS 189 Q++LG+PAS+ G + L V+ ++ + YGGVM+W+R+ D ++ YS+ Sbjct: 232 QVFLGVPASDAAAPSGGLIPADVLTSQVLPAIKTSPKYGGVMIWDRFNDAQSGYSN 287
>CHIA_PHAAN (P29024) Acidic endochitinase precursor (EC 3.2.1.14)| Length = 298 Score = 43.1 bits (100), Expect = 2e-04 Identities = 20/58 (34%), Positives = 35/58 (60%), Gaps = 2/58 (3%) Frame = -3 Query: 347 QIYLGLPASEQKVG--YVHPKNLYYGVIQVVQKAANYGGVMVWERYEDKRTNYSSYAI 180 Q++LG+PAS G ++ L V+ ++ ++ YGGVM+W+R+ D ++ YS I Sbjct: 238 QLFLGVPASTAAAGSGFIPADVLTSQVLPTIKGSSKYGGVMLWDRFNDGQSGYSGAII 295
>CHIB_TOBAC (P29061) Basic endochitinase precursor (EC 3.2.1.14)| Length = 294 Score = 41.2 bits (95), Expect = 6e-04 Identities = 20/55 (36%), Positives = 34/55 (61%), Gaps = 2/55 (3%) Frame = -3 Query: 347 QIYLGLPASEQKVG--YVHPKNLYYGVIQVVQKAANYGGVMVWERYEDKRTNYSS 189 ++Y+GLPA++ G Y+ + L V+ ++ ++ YGGVM+W R D + YSS Sbjct: 234 KLYIGLPAAKTAAGNGYIPKQVLMSQVLPFLKGSSKYGGVMLWNRKFDVQCGYSS 288
>CHIE_BETVU (P36910) Acidic endochitinase SE2 precursor (EC 3.2.1.14)| Length = 293 Score = 38.9 bits (89), Expect = 0.003 Identities = 22/55 (40%), Positives = 32/55 (58%), Gaps = 2/55 (3%) Frame = -3 Query: 347 QIYLGLPASEQKVG--YVHPKNLYYGVIQVVQKAANYGGVMVWERYEDKRTNYSS 189 QI+LGLPAS G ++ L V+ ++ +A YGGVM+W + D + YSS Sbjct: 235 QIFLGLPASTDAAGSGFIPADALTSQVLPTIKGSAKYGGVMLWSKAYD--SGYSS 287
>CHIA_CUCSA (P17541) Acidic endochitinase precursor (EC 3.2.1.14)| Length = 292 Score = 37.0 bits (84), Expect = 0.012 Identities = 16/49 (32%), Positives = 30/49 (61%), Gaps = 3/49 (6%) Frame = -3 Query: 347 QIYLGLPASEQKV---GYVHPKNLYYGVIQVVQKAANYGGVMVWERYED 210 ++Y+GLPA+ + G++ L V+ ++ ++NYGGVM+W + D Sbjct: 232 KLYMGLPAAREAAPSGGFIPADVLISQVLPTIKASSNYGGVMLWSKAFD 280
>CHIA_TOBAC (P29060) Acidic endochitinase precursor (EC 3.2.1.14)| Length = 291 Score = 36.2 bits (82), Expect = 0.021 Identities = 19/55 (34%), Positives = 32/55 (58%), Gaps = 2/55 (3%) Frame = -3 Query: 347 QIYLGLPASEQKVG--YVHPKNLYYGVIQVVQKAANYGGVMVWERYEDKRTNYSS 189 +I+LGLPA++ G ++ L V+ ++ + YGGVM+W ++ D YSS Sbjct: 233 KIFLGLPAAQGAAGSGFIPSDVLVSQVLPLINGSPKYGGVMLWSKFYD--NGYSS 285
>CONB_CANEN (P49347) Concanavalin B precursor (Con B)| Length = 324 Score = 35.8 bits (81), Expect = 0.027 Identities = 20/61 (32%), Positives = 31/61 (50%), Gaps = 4/61 (6%) Frame = -3 Query: 344 IYLGLPASEQKV---GYVHPKNLYYGVIQVVQKA-ANYGGVMVWERYEDKRTNYSSYAIQ 177 ++L LPAS+ GY+ P L V+ + Y G+ +W R DK T YS+ I+ Sbjct: 247 LFLELPASQATAPGGGYIPPSALIGQVLPYLPDLQTRYAGIALWNRQADKETGYSTNIIR 306 Query: 176 W 174 + Sbjct: 307 Y 307
>CHIT_YEAST (P29029) Endochitinase precursor (EC 3.2.1.14) (Soluble cell wall| protein 2) Length = 562 Score = 30.4 bits (67), Expect = 1.1 Identities = 12/44 (27%), Positives = 25/44 (56%), Gaps = 2/44 (4%) Frame = -3 Query: 347 QIYLGLPASEQKVG--YVHPKNLYYGVIQVVQKAANYGGVMVWE 222 +++LGLP S G Y+ +L I + ++++GG+ +W+ Sbjct: 243 KLFLGLPGSASAAGSGYISDTSLLESTIADIASSSSFGGIALWD 286
>HIS8_GEOMG (Q39YP6) Histidinol-phosphate aminotransferase (EC 2.6.1.9)| (Imidazole acetol-phosphate transaminase) Length = 350 Score = 30.0 bits (66), Expect = 1.5 Identities = 12/25 (48%), Positives = 16/25 (64%) Frame = -3 Query: 326 ASEQKVGYVHPKNLYYGVIQVVQKA 252 A +++GYVHP YYG + VQ A Sbjct: 102 AEGEEIGYVHPSYSYYGTLAEVQGA 126
>VGLE_VZVD (P09259) Glycoprotein E precursor (Glycoprotein GI)| Length = 623 Score = 28.9 bits (63), Expect = 3.3 Identities = 12/42 (28%), Positives = 23/42 (54%), Gaps = 1/42 (2%) Frame = -3 Query: 296 PKNLYYGVIQVVQKAANYGGVMVWE-RYEDKRTNYSSYAIQW 174 P + GV++V++ Y GV +W R D + Y+++ + W Sbjct: 278 PPEIEPGVLKVLRTEKQYLGVYIWNMRGSDGTSTYATFLVTW 319
>SFB3_YEAST (P38810) SED5-binding protein 3 (SEC24-related protein 3) (Lethal| with SEC13 protein 1) Length = 929 Score = 28.9 bits (63), Expect = 3.3 Identities = 19/53 (35%), Positives = 24/53 (45%), Gaps = 8/53 (15%) Frame = -2 Query: 180 PMGLTLRRSDRHR--------VDLLYPSVYXXXXXXCLLPLQ*ISIASVKLCA 46 PMG +RSD + VD L PS+Y LLPL + + V L A Sbjct: 257 PMGPNGQRSDLNEKSELLHGTVDFLVPSIYNAIQEKELLPLHYVFLIDVSLLA 309
>MLL2_HUMAN (O14686) Myeloid/lymphoid or mixed-lineage leukemia protein 2| (ALL1-related protein) Length = 5262 Score = 28.5 bits (62), Expect = 4.3 Identities = 17/39 (43%), Positives = 20/39 (51%) Frame = -2 Query: 303 RSSKEPLLRRHTGGAEGGQLWRGHGLGTLRGQADKLQQL 187 RSS P RR GGA GG RG G L+ A ++ L Sbjct: 1029 RSSSFPGRRRPRGGAHGG---RGRGRARLKSTASSIETL 1064
>FIMC_BORPE (P33410) Outer membrane usher protein fimC precursor| Length = 873 Score = 28.5 bits (62), Expect = 4.3 Identities = 14/35 (40%), Positives = 18/35 (51%) Frame = -1 Query: 298 IQRTSTTASYRWCRRRPTMAGSWSGNVTRTSGQIT 194 +QR T+A Y + GSWSG SGQ+T Sbjct: 620 VQRAGTSAQY-------ALNGSWSGTYGEVSGQLT 647
>SP1_HORSE (P81121) Seminal plasma protein HSP-1| Length = 120 Score = 28.1 bits (61), Expect = 5.6 Identities = 11/28 (39%), Positives = 14/28 (50%) Frame = -1 Query: 313 RSVTFIQRTSTTASYRWCRRRPTMAGSW 230 R + T T + YRWC T +GSW Sbjct: 41 RGYRYYDCTRTDSFYRWCSLTGTYSGSW 68
>FLO5_YEAST (P38894) Flocculation protein FLO5 precursor (Flocculin-5)| Length = 1075 Score = 27.7 bits (60), Expect = 7.3 Identities = 16/40 (40%), Positives = 20/40 (50%) Frame = -1 Query: 292 RTSTTASYRWCRRRPTMAGSWSGNVTRTSGQITAATPSNG 173 RT TTAS P W+G T TS ++T T +NG Sbjct: 313 RTPTTASTITTTTEP-----WTGTFTSTSTEMTTVTGTNG 347
>LDLR1_XENLA (Q99087) Low-density lipoprotein receptor 1 precursor (LDL receptor| 1) Length = 909 Score = 27.3 bits (59), Expect = 9.5 Identities = 12/34 (35%), Positives = 18/34 (52%) Frame = -3 Query: 299 HPKNLYYGVIQVVQKAANYGGVMVWERYEDKRTN 198 HP LY + V+ +GG +VW+ + K TN Sbjct: 834 HPTALYIVLPIVILCLVAFGGFLVWKNWRLKNTN 867
>NFASC_CHICK (O42414) Neurofascin precursor| Length = 1369 Score = 27.3 bits (59), Expect = 9.5 Identities = 17/55 (30%), Positives = 24/55 (43%), Gaps = 3/55 (5%) Frame = -1 Query: 298 IQRTSTTASYRWCRRRPTMAGSWSGNVTRTSGQITAATP---SNGLDPPSLRSSP 143 +QRT + YR+ R T G V + + ATP S L PP+ +P Sbjct: 1015 VQRTDPISRYRFFLRARTQVGDGEVIVEESPALLNEATPTPASTWLPPPTTELTP 1069
>CHI2_CANAL (P40953) Chitinase 2 precursor (EC 3.2.1.14)| Length = 583 Score = 27.3 bits (59), Expect = 9.5 Identities = 11/42 (26%), Positives = 25/42 (59%) Frame = -3 Query: 347 QIYLGLPASEQKVGYVHPKNLYYGVIQVVQKAANYGGVMVWE 222 ++++G+PA+ GYV L I+ ++ +++ GV +W+ Sbjct: 239 KLFVGVPATSNIAGYVDTSKL-SSAIEEIKCDSHFAGVSLWD 279 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 48,848,238 Number of Sequences: 219361 Number of extensions: 858329 Number of successful extensions: 2794 Number of sequences better than 10.0: 24 Number of HSP's better than 10.0 without gapping: 2705 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2793 length of database: 80,573,946 effective HSP length: 91 effective length of database: 60,612,095 effective search space used: 1454690280 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)