ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart23b05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_470282.1| Oryza sativa (japonica cultivar-group), mRNA 139 1e-29
2gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 139 1e-29
3gb|AC073556.11| Oryza sativa chromosome 3 BAC OSJNBa0091P11 geno... 139 1e-29
4dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 139 1e-29
5dbj|AK121575.1| Oryza sativa (japonica cultivar-group) cDNA clon... 139 1e-29
6ref|XM_472838.1| Oryza sativa (japonica cultivar-group), predic... 44 0.44
7emb|AL606447.3|OSJN00011 Oryza sativa genomic DNA, chromosome 4,... 44 0.44
8dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.44
9emb|X13498.1|HVABAIP Barley pHVA1 mRNA for an ABA-inducible protein 44 0.44
10emb|X78205.1|HVHVA1 H.vulgare (Himalaya) HVA1 gene 44 0.44
11gb|AC104713.3| Oryza sativa (japonica cultivar-group) chromosome... 42 1.7
12gb|CP000088.1| Thermobifida fusca YX, complete genome 42 1.7
13emb|AL939128.1|SCO939128 Streptomyces coelicolor A3(2) complete ... 42 1.7
14emb|AL806526.4| Mouse DNA sequence from clone RP23-123F24 on chr... 42 1.7
15dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.7
16gb|AY972063.1| Gordonia rubripertincta strain JCM 3199 DNA gyras... 42 1.7
17gb|AY972062.1| Gordonia rubripertincta strain DSM 43248 DNA gyra... 42 1.7
18gb|AY972061.1| Gordonia rubripertincta strain DSM 43197 DNA gyra... 42 1.7
19dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 42 1.7
20gb|AC147245.3| Mus musculus BAC clone RP23-462E12 from 12, compl... 42 1.7
21gb|AY067356.1| Schmidtea mediterranea clone H.99.12d(T3) unknown... 42 1.7
22gb|CP000148.1| Geobacter metallireducens GS-15, complete genome 40 6.8
23ref|NM_197250.1| Oryza sativa (japonica cultivar-group) hypothet... 40 6.8
24ref|NM_189197.1| Oryza sativa (japonica cultivar-group), predic... 40 6.8
25gb|U70213.1|MCU70213 Mesocestoides corti heat shock 70kDa protei... 40 6.8
26gb|AC084023.8| Oryza sativa (japonica cultivar-group) chromosome... 40 6.8
27ref|XM_421787.1| PREDICTED: Gallus gallus similar to eukaryotic ... 40 6.8
28ref|XM_591532.2| PREDICTED: Bos taurus similar to protein kinase... 40 6.8
29ref|XM_882120.1| PREDICTED: Bos taurus similar to protein kinase... 40 6.8
30ref|XM_882093.1| PREDICTED: Bos taurus similar to protein kinase... 40 6.8
31ref|XM_868879.1| PREDICTED: Bos taurus similar to protein kinase... 40 6.8
32gb|AC112254.6| Homo sapiens BAC clone RP11-1156I21 from 4, compl... 40 6.8
33gb|BC114745.1| Bos taurus cDNA clone MGC:137898 IMAGE:8083530, c... 40 6.8
34gb|AC068768.31| Homo sapiens 12 BAC RP11-282O18 (Roswell Park Ca... 40 6.8
35emb|X52522.1|RGHUPSL Rhodocyclus gelatinosus hupSL genes for upt... 40 6.8
36gb|CP000249.1| Frankia sp. CcI3, complete genome 40 6.8
37gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome 40 6.8
38dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.8
39dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.8
40gb|AC007086.10|AC007086 Drosophila melanogaster, chromosome 2R, ... 40 6.8
41gb|AC019196.10| Homo sapiens BAC clone RP11-356G6 from 2, comple... 40 6.8
42dbj|AP003578.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.8
43gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 40 6.8
44dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome 40 6.8
45gb|AY972058.1| Gordonia amicalis strain CC-S5-7 DNA gyrase subun... 40 6.8
46dbj|AK073246.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.8
47dbj|AK066192.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.8
48emb|CR925810.4| Zebrafish DNA sequence from clone DKEY-250M6 in ... 40 6.8
49gb|AE003833.4| Drosophila melanogaster chromosome 2R, section 17... 40 6.8
50dbj|AP003171.2| Homo sapiens genomic DNA, chromosome 11q clone:R... 40 6.8
51gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 40 6.8
52emb|BX005375.9| Zebrafish DNA sequence from clone CH211-207N2 in... 40 6.8
53emb|AL845434.11| Mouse DNA sequence from clone RP23-211O3 on chr... 40 6.8
54dbj|AP006099.1| Lotus japonicus genomic DNA, chromosome 5, clone... 40 6.8 
>ref|XM_470282.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1203

 Score =  139 bits (70), Expect = 1e-29
 Identities = 103/114 (90%)
 Strand = Plus / Minus

                                                                        
Query: 237  ccttctccttcaccttctcgtacccctcgtttgccttccccttggccgcctccgctgtct 296
            ||||||||||||||||||||||||||||||| |||||| || | ||||||||||| ||||
Sbjct: 1069 ccttctccttcaccttctcgtacccctcgttcgccttctccctcgccgcctccgccgtct 1010

                                                                  
Query: 297  cccaggccgtgtccttggccgcctccgccgtctcccacgcggcgtccttcgccg 350
            |||| || | |||||| |||||||||||| |||||||||| |||||||||||||
Sbjct: 1009 cccacgcggcgtccttcgccgcctccgccttctcccacgccgcgtccttcgccg 956



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 96/117 (82%)
 Strand = Plus / Minus

                                                                       
Query: 280 ggccgcctccgctgtctcccaggccgtgtccttggccgcctccgccgtctcccacgcggc 339
           ||||||||||||  ||||||  |||| |||||| |||||| | ||| |||||  ||||||
Sbjct: 906 ggccgcctccgccttctcccgcgccgcgtccttcgccgccccggccttctccgccgcggc 847

                                                                    
Query: 340 gtccttcgccgacgctgtcttctccaacgtggcgtccttggccgctcctgccttctc 396
           ||||||||||||   |||||||||| |||  |||||||| ||||  || ||||||||
Sbjct: 846 gtccttcgccgagcttgtcttctcccacgccgcgtccttcgccgacccggccttctc 790



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 49/57 (85%)
 Strand = Plus / Minus

                                                                    
Query: 327 tctcccacgcggcgtccttcgccgacgctgtcttctccaacgtggcgtccttggccg 383
           |||||||||| ||||||||||||||| | | |||||||  || ||||||||| ||||
Sbjct: 826 tctcccacgccgcgtccttcgccgacccggccttctccgccgcggcgtccttcgccg 770



 Score = 48.1 bits (24), Expect = 0.028
 Identities = 45/52 (86%)
 Strand = Plus / Minus

                                                                
Query: 411  tcgccgcctcggcgttcttccacgcggcgtccttcgcggccgcggccttctc 462
            |||||||||| ||  ||| |||||||||||||||||| ||| | ||||||||
Sbjct: 1027 tcgccgcctccgccgtctcccacgcggcgtccttcgccgcctccgccttctc 976



 Score = 48.1 bits (24), Expect = 0.028
 Identities = 45/52 (86%)
 Strand = Plus / Minus

                                                               
Query: 409 cttcgccgcctcggcgttcttccacgcggcgtccttcgcggccgcggccttc 460
           |||||||||||| || |||| |||||| ||||||||||| ||  ||||||||
Sbjct: 996 cttcgccgcctccgccttctcccacgccgcgtccttcgccgcgccggccttc 945



 Score = 44.1 bits (22), Expect = 0.44
 Identities = 43/50 (86%)
 Strand = Plus / Minus

                                                             
Query: 413 gccgcctcggcgttcttccacgcggcgtccttcgcggccgcggccttctc 462
           |||||||| || |||| || ||| ||||||||||| ||| ||||||||||
Sbjct: 905 gccgcctccgccttctcccgcgccgcgtccttcgccgccccggccttctc 856



 Score = 44.1 bits (22), Expect = 0.44
 Identities = 49/58 (84%)
 Strand = Plus / Minus

                                                                     
Query: 294 tctcccaggccgtgtccttggccgcctccgccgtctcccacgcggcgtccttcgccga 351
           ||||||| |||| |||||| |||| | | ||| |||||  ||||||||||||||||||
Sbjct: 826 tctcccacgccgcgtccttcgccgacccggccttctccgccgcggcgtccttcgccga 769
to top
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  139 bits (70), Expect = 1e-29
 Identities = 103/114 (90%)
 Strand = Plus / Plus

                                                                           
Query: 237     ccttctccttcaccttctcgtacccctcgtttgccttccccttggccgcctccgctgtct 296
               ||||||||||||||||||||||||||||||| |||||| || | ||||||||||| ||||
Sbjct: 3660350 ccttctccttcaccttctcgtacccctcgttcgccttctccctcgccgcctccgccgtct 3660409

                                                                     
Query: 297     cccaggccgtgtccttggccgcctccgccgtctcccacgcggcgtccttcgccg 350
               |||| || | |||||| |||||||||||| |||||||||| |||||||||||||
Sbjct: 3660410 cccacgcggcgtccttcgccgcctccgccttctcccacgccgcgtccttcgccg 3660463



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 71/81 (87%)
 Strand = Plus / Plus

                                                                           
Query: 314     gccgcctccgccgtctcccacgcggcgtccttcgccgacgctgtcttctccaacgtggcg 373
               ||||||||||||||||||||||||||||||||||||| | | | ||||||| |||  |||
Sbjct: 3660394 gccgcctccgccgtctcccacgcggcgtccttcgccgcctccgccttctcccacgccgcg 3660453

                                    
Query: 374     tccttggccgctcctgccttc 394
               ||||| ||||| || ||||||
Sbjct: 3660454 tccttcgccgcgccggccttc 3660474



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 96/117 (82%)
 Strand = Plus / Plus

                                                                           
Query: 280     ggccgcctccgctgtctcccaggccgtgtccttggccgcctccgccgtctcccacgcggc 339
               ||||||||||||  ||||||  |||| |||||| |||||| | ||| |||||  ||||||
Sbjct: 3660513 ggccgcctccgccttctcccgcgccgcgtccttcgccgccccggccttctccgccgcggc 3660572

                                                                        
Query: 340     gtccttcgccgacgctgtcttctccaacgtggcgtccttggccgctcctgccttctc 396
               ||||||||||||   |||||||||| |||  |||||||| ||||  || ||||||||
Sbjct: 3660573 gtccttcgccgagcttgtcttctcccacgccgcgtccttcgccgacccggccttctc 3660629



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 49/57 (85%)
 Strand = Plus / Plus

                                                                        
Query: 327     tctcccacgcggcgtccttcgccgacgctgtcttctccaacgtggcgtccttggccg 383
               |||||||||| ||||||||||||||| | | |||||||  || ||||||||| ||||
Sbjct: 3660593 tctcccacgccgcgtccttcgccgacccggccttctccgccgcggcgtccttcgccg 3660649



 Score = 48.1 bits (24), Expect = 0.028
 Identities = 45/52 (86%)
 Strand = Plus / Plus

                                                                   
Query: 409     cttcgccgcctcggcgttcttccacgcggcgtccttcgcggccgcggccttc 460
               |||||||||||| || |||| |||||| ||||||||||| ||  ||||||||
Sbjct: 3660423 cttcgccgcctccgccttctcccacgccgcgtccttcgccgcgccggccttc 3660474



 Score = 48.1 bits (24), Expect = 0.028
 Identities = 45/52 (86%)
 Strand = Plus / Plus

                                                                   
Query: 411     tcgccgcctcggcgttcttccacgcggcgtccttcgcggccgcggccttctc 462
               |||||||||| ||  ||| |||||||||||||||||| ||| | ||||||||
Sbjct: 3660392 tcgccgcctccgccgtctcccacgcggcgtccttcgccgcctccgccttctc 3660443



 Score = 44.1 bits (22), Expect = 0.44
 Identities = 49/58 (84%)
 Strand = Plus / Plus

                                                                         
Query: 294     tctcccaggccgtgtccttggccgcctccgccgtctcccacgcggcgtccttcgccga 351
               ||||||| |||| |||||| |||| | | ||| |||||  ||||||||||||||||||
Sbjct: 3660593 tctcccacgccgcgtccttcgccgacccggccttctccgccgcggcgtccttcgccga 3660650



 Score = 44.1 bits (22), Expect = 0.44
 Identities = 43/50 (86%)
 Strand = Plus / Plus

                                                                 
Query: 413     gccgcctcggcgttcttccacgcggcgtccttcgcggccgcggccttctc 462
               |||||||| || |||| || ||| ||||||||||| ||| ||||||||||
Sbjct: 3660514 gccgcctccgccttctcccgcgccgcgtccttcgccgccccggccttctc 3660563



 Score = 40.1 bits (20), Expect = 6.8
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                               
Query: 32      gttctctacagatgggtcacattattgtacaa 63
               ||||||||||||  | ||||||||||||||||
Sbjct: 3660064 gttctctacagaaagatcacattattgtacaa 3660095
to top
>gb|AC073556.11| Oryza sativa chromosome 3 BAC OSJNBa0091P11 genomic sequence, complete
              sequence
          Length = 160738

 Score =  139 bits (70), Expect = 1e-29
 Identities = 103/114 (90%)
 Strand = Plus / Minus

                                                                          
Query: 237    ccttctccttcaccttctcgtacccctcgtttgccttccccttggccgcctccgctgtct 296
              ||||||||||||||||||||||||||||||| |||||| || | ||||||||||| ||||
Sbjct: 121027 ccttctccttcaccttctcgtacccctcgttcgccttctccctcgccgcctccgccgtct 120968

                                                                    
Query: 297    cccaggccgtgtccttggccgcctccgccgtctcccacgcggcgtccttcgccg 350
              |||| || | |||||| |||||||||||| |||||||||| |||||||||||||
Sbjct: 120967 cccacgcggcgtccttcgccgcctccgccttctcccacgccgcgtccttcgccg 120914



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 71/81 (87%)
 Strand = Plus / Minus

                                                                          
Query: 314    gccgcctccgccgtctcccacgcggcgtccttcgccgacgctgtcttctccaacgtggcg 373
              ||||||||||||||||||||||||||||||||||||| | | | ||||||| |||  |||
Sbjct: 120983 gccgcctccgccgtctcccacgcggcgtccttcgccgcctccgccttctcccacgccgcg 120924

                                   
Query: 374    tccttggccgctcctgccttc 394
              ||||| ||||| || ||||||
Sbjct: 120923 tccttcgccgcgccggccttc 120903



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 96/117 (82%)
 Strand = Plus / Minus

                                                                          
Query: 280    ggccgcctccgctgtctcccaggccgtgtccttggccgcctccgccgtctcccacgcggc 339
              ||||||||||||  ||||||  |||| |||||| |||||| | ||| |||||  ||||||
Sbjct: 120864 ggccgcctccgccttctcccgcgccgcgtccttcgccgccccggccttctccgccgcggc 120805

                                                                       
Query: 340    gtccttcgccgacgctgtcttctccaacgtggcgtccttggccgctcctgccttctc 396
              ||||||||||||   |||||||||| |||  |||||||| ||||  || ||||||||
Sbjct: 120804 gtccttcgccgagcttgtcttctcccacgccgcgtccttcgccgacccggccttctc 120748



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 49/57 (85%)
 Strand = Plus / Minus

                                                                       
Query: 327    tctcccacgcggcgtccttcgccgacgctgtcttctccaacgtggcgtccttggccg 383
              |||||||||| ||||||||||||||| | | |||||||  || ||||||||| ||||
Sbjct: 120784 tctcccacgccgcgtccttcgccgacccggccttctccgccgcggcgtccttcgccg 120728



 Score = 48.1 bits (24), Expect = 0.028
 Identities = 45/52 (86%)
 Strand = Plus / Minus

                                                                  
Query: 411    tcgccgcctcggcgttcttccacgcggcgtccttcgcggccgcggccttctc 462
              |||||||||| ||  ||| |||||||||||||||||| ||| | ||||||||
Sbjct: 120985 tcgccgcctccgccgtctcccacgcggcgtccttcgccgcctccgccttctc 120934



 Score = 48.1 bits (24), Expect = 0.028
 Identities = 45/52 (86%)
 Strand = Plus / Minus

                                                                  
Query: 409    cttcgccgcctcggcgttcttccacgcggcgtccttcgcggccgcggccttc 460
              |||||||||||| || |||| |||||| ||||||||||| ||  ||||||||
Sbjct: 120954 cttcgccgcctccgccttctcccacgccgcgtccttcgccgcgccggccttc 120903



 Score = 44.1 bits (22), Expect = 0.44
 Identities = 43/50 (86%)
 Strand = Plus / Minus

                                                                
Query: 413    gccgcctcggcgttcttccacgcggcgtccttcgcggccgcggccttctc 462
              |||||||| || |||| || ||| ||||||||||| ||| ||||||||||
Sbjct: 120863 gccgcctccgccttctcccgcgccgcgtccttcgccgccccggccttctc 120814



 Score = 44.1 bits (22), Expect = 0.44
 Identities = 49/58 (84%)
 Strand = Plus / Minus

                                                                        
Query: 294    tctcccaggccgtgtccttggccgcctccgccgtctcccacgcggcgtccttcgccga 351
              ||||||| |||| |||||| |||| | | ||| |||||  ||||||||||||||||||
Sbjct: 120784 tctcccacgccgcgtccttcgccgacccggccttctccgccgcggcgtccttcgccga 120727



 Score = 40.1 bits (20), Expect = 6.8
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                              
Query: 32     gttctctacagatgggtcacattattgtacaa 63
              ||||||||||||  | ||||||||||||||||
Sbjct: 121313 gttctctacagaaagatcacattattgtacaa 121282
to top
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score =  139 bits (70), Expect = 1e-29
 Identities = 103/114 (90%)
 Strand = Plus / Plus

                                                                           
Query: 237     ccttctccttcaccttctcgtacccctcgtttgccttccccttggccgcctccgctgtct 296
               ||||||||||||||||||||||||||||||| |||||| || | ||||||||||| ||||
Sbjct: 3660461 ccttctccttcaccttctcgtacccctcgttcgccttctccctcgccgcctccgccgtct 3660520

                                                                     
Query: 297     cccaggccgtgtccttggccgcctccgccgtctcccacgcggcgtccttcgccg 350
               |||| || | |||||| |||||||||||| |||||||||| |||||||||||||
Sbjct: 3660521 cccacgcggcgtccttcgccgcctccgccttctcccacgccgcgtccttcgccg 3660574



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 71/81 (87%)
 Strand = Plus / Plus

                                                                           
Query: 314     gccgcctccgccgtctcccacgcggcgtccttcgccgacgctgtcttctccaacgtggcg 373
               ||||||||||||||||||||||||||||||||||||| | | | ||||||| |||  |||
Sbjct: 3660505 gccgcctccgccgtctcccacgcggcgtccttcgccgcctccgccttctcccacgccgcg 3660564

                                    
Query: 374     tccttggccgctcctgccttc 394
               ||||| ||||| || ||||||
Sbjct: 3660565 tccttcgccgcgccggccttc 3660585



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 96/117 (82%)
 Strand = Plus / Plus

                                                                           
Query: 280     ggccgcctccgctgtctcccaggccgtgtccttggccgcctccgccgtctcccacgcggc 339
               ||||||||||||  ||||||  |||| |||||| |||||| | ||| |||||  ||||||
Sbjct: 3660624 ggccgcctccgccttctcccgcgccgcgtccttcgccgccccggccttctccgccgcggc 3660683

                                                                        
Query: 340     gtccttcgccgacgctgtcttctccaacgtggcgtccttggccgctcctgccttctc 396
               ||||||||||||   |||||||||| |||  |||||||| ||||  || ||||||||
Sbjct: 3660684 gtccttcgccgagcttgtcttctcccacgccgcgtccttcgccgacccggccttctc 3660740



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 49/57 (85%)
 Strand = Plus / Plus

                                                                        
Query: 327     tctcccacgcggcgtccttcgccgacgctgtcttctccaacgtggcgtccttggccg 383
               |||||||||| ||||||||||||||| | | |||||||  || ||||||||| ||||
Sbjct: 3660704 tctcccacgccgcgtccttcgccgacccggccttctccgccgcggcgtccttcgccg 3660760



 Score = 48.1 bits (24), Expect = 0.028
 Identities = 45/52 (86%)
 Strand = Plus / Plus

                                                                   
Query: 409     cttcgccgcctcggcgttcttccacgcggcgtccttcgcggccgcggccttc 460
               |||||||||||| || |||| |||||| ||||||||||| ||  ||||||||
Sbjct: 3660534 cttcgccgcctccgccttctcccacgccgcgtccttcgccgcgccggccttc 3660585



 Score = 48.1 bits (24), Expect = 0.028
 Identities = 45/52 (86%)
 Strand = Plus / Plus

                                                                   
Query: 411     tcgccgcctcggcgttcttccacgcggcgtccttcgcggccgcggccttctc 462
               |||||||||| ||  ||| |||||||||||||||||| ||| | ||||||||
Sbjct: 3660503 tcgccgcctccgccgtctcccacgcggcgtccttcgccgcctccgccttctc 3660554



 Score = 44.1 bits (22), Expect = 0.44
 Identities = 49/58 (84%)
 Strand = Plus / Plus

                                                                         
Query: 294     tctcccaggccgtgtccttggccgcctccgccgtctcccacgcggcgtccttcgccga 351
               ||||||| |||| |||||| |||| | | ||| |||||  ||||||||||||||||||
Sbjct: 3660704 tctcccacgccgcgtccttcgccgacccggccttctccgccgcggcgtccttcgccga 3660761



 Score = 44.1 bits (22), Expect = 0.44
 Identities = 43/50 (86%)
 Strand = Plus / Plus

                                                                 
Query: 413     gccgcctcggcgttcttccacgcggcgtccttcgcggccgcggccttctc 462
               |||||||| || |||| || ||| ||||||||||| ||| ||||||||||
Sbjct: 3660625 gccgcctccgccttctcccgcgccgcgtccttcgccgccccggccttctc 3660674



 Score = 40.1 bits (20), Expect = 6.8
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                               
Query: 32      gttctctacagatgggtcacattattgtacaa 63
               ||||||||||||  | ||||||||||||||||
Sbjct: 3660175 gttctctacagaaagatcacattattgtacaa 3660206
to top
>dbj|AK121575.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033036H02, full
            insert sequence
          Length = 1540

 Score =  139 bits (70), Expect = 1e-29
 Identities = 103/114 (90%)
 Strand = Plus / Minus

                                                                        
Query: 237  ccttctccttcaccttctcgtacccctcgtttgccttccccttggccgcctccgctgtct 296
            ||||||||||||||||||||||||||||||| |||||| || | ||||||||||| ||||
Sbjct: 1158 ccttctccttcaccttctcgtacccctcgttcgccttctccctcgccgcctccgccgtct 1099

                                                                  
Query: 297  cccaggccgtgtccttggccgcctccgccgtctcccacgcggcgtccttcgccg 350
            |||| || | |||||| |||||||||||| |||||||||| |||||||||||||
Sbjct: 1098 cccacgcggcgtccttcgccgcctccgccttctcccacgccgcgtccttcgccg 1045



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 71/81 (87%)
 Strand = Plus / Minus

                                                                        
Query: 314  gccgcctccgccgtctcccacgcggcgtccttcgccgacgctgtcttctccaacgtggcg 373
            ||||||||||||||||||||||||||||||||||||| | | | ||||||| |||  |||
Sbjct: 1114 gccgcctccgccgtctcccacgcggcgtccttcgccgcctccgccttctcccacgccgcg 1055

                                 
Query: 374  tccttggccgctcctgccttc 394
            ||||| ||||| || ||||||
Sbjct: 1054 tccttcgccgcgccggccttc 1034



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 96/117 (82%)
 Strand = Plus / Minus

                                                                       
Query: 280 ggccgcctccgctgtctcccaggccgtgtccttggccgcctccgccgtctcccacgcggc 339
           ||||||||||||  ||||||  |||| |||||| |||||| | ||| |||||  ||||||
Sbjct: 995 ggccgcctccgccttctcccgcgccgcgtccttcgccgccccggccttctccgccgcggc 936

                                                                    
Query: 340 gtccttcgccgacgctgtcttctccaacgtggcgtccttggccgctcctgccttctc 396
           ||||||||||||   |||||||||| |||  |||||||| ||||  || ||||||||
Sbjct: 935 gtccttcgccgagcttgtcttctcccacgccgcgtccttcgccgacccggccttctc 879



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 49/57 (85%)
 Strand = Plus / Minus

                                                                    
Query: 327 tctcccacgcggcgtccttcgccgacgctgtcttctccaacgtggcgtccttggccg 383
           |||||||||| ||||||||||||||| | | |||||||  || ||||||||| ||||
Sbjct: 915 tctcccacgccgcgtccttcgccgacccggccttctccgccgcggcgtccttcgccg 859



 Score = 48.1 bits (24), Expect = 0.028
 Identities = 45/52 (86%)
 Strand = Plus / Minus

                                                                
Query: 411  tcgccgcctcggcgttcttccacgcggcgtccttcgcggccgcggccttctc 462
            |||||||||| ||  ||| |||||||||||||||||| ||| | ||||||||
Sbjct: 1116 tcgccgcctccgccgtctcccacgcggcgtccttcgccgcctccgccttctc 1065



 Score = 48.1 bits (24), Expect = 0.028
 Identities = 45/52 (86%)
 Strand = Plus / Minus

                                                                
Query: 409  cttcgccgcctcggcgttcttccacgcggcgtccttcgcggccgcggccttc 460
            |||||||||||| || |||| |||||| ||||||||||| ||  ||||||||
Sbjct: 1085 cttcgccgcctccgccttctcccacgccgcgtccttcgccgcgccggccttc 1034



 Score = 44.1 bits (22), Expect = 0.44
 Identities = 43/50 (86%)
 Strand = Plus / Minus

                                                             
Query: 413 gccgcctcggcgttcttccacgcggcgtccttcgcggccgcggccttctc 462
           |||||||| || |||| || ||| ||||||||||| ||| ||||||||||
Sbjct: 994 gccgcctccgccttctcccgcgccgcgtccttcgccgccccggccttctc 945



 Score = 44.1 bits (22), Expect = 0.44
 Identities = 49/58 (84%)
 Strand = Plus / Minus

                                                                     
Query: 294 tctcccaggccgtgtccttggccgcctccgccgtctcccacgcggcgtccttcgccga 351
           ||||||| |||| |||||| |||| | | ||| |||||  ||||||||||||||||||
Sbjct: 915 tctcccacgccgcgtccttcgccgacccggccttctccgccgcggcgtccttcgccga 858



 Score = 40.1 bits (20), Expect = 6.8
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 32   gttctctacagatgggtcacattattgtacaa 63
            ||||||||||||  | ||||||||||||||||
Sbjct: 1444 gttctctacagaaagatcacattattgtacaa 1413
to top
>ref|XM_472838.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2622

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 315  ccgcctccgccgtctcccacgcggcg 340
            ||||| ||||||||||||||||||||
Sbjct: 2432 ccgccgccgccgtctcccacgcggcg 2457
to top
>emb|AL606447.3|OSJN00011 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0022F23,
             complete sequence
          Length = 130273

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 315   ccgcctccgccgtctcccacgcggcg 340
             ||||| ||||||||||||||||||||
Sbjct: 47607 ccgccgccgccgtctcccacgcggcg 47632
to top
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                          
Query: 315      ccgcctccgccgtctcccacgcggcg 340
                ||||| ||||||||||||||||||||
Sbjct: 23604926 ccgccgccgccgtctcccacgcggcg 23604951
to top
>emb|X13498.1|HVABAIP Barley pHVA1 mRNA for an ABA-inducible protein
          Length = 997

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 46/54 (85%)
 Strand = Plus / Minus

                                                                 
Query: 276 ccttggccgcctccgctgtctcccaggccgtgtccttggccgcctccgccgtct 329
           |||||||||||| ||| |||||  | | | ||||||||||||||| ||||||||
Sbjct: 399 ccttggccgcctgcgccgtctcgtacgtcttgtccttggccgcctgcgccgtct 346
to top
>emb|X78205.1|HVHVA1 H.vulgare (Himalaya) HVA1 gene
          Length = 1804

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 46/54 (85%)
 Strand = Plus / Minus

                                                                 
Query: 276 ccttggccgcctccgctgtctcccaggccgtgtccttggccgcctccgccgtct 329
           |||||||||||| ||| |||||  | | | ||||||||||||||| ||||||||
Sbjct: 878 ccttggccgcctgcgccgtctcgtacgtcttgtccttggccgcctgcgccgtct 825
to top
>gb|AC104713.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1362_G11,
             complete sequence
          Length = 115808

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 449   gccgcggccttctcggcggcc 469
             |||||||||||||||||||||
Sbjct: 67094 gccgcggccttctcggcggcc 67074
to top
>gb|CP000088.1| Thermobifida fusca YX, complete genome
          Length = 3642249

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 328     ctcccacgcggcgtccttcgccgac 352
               ||||||||||| |||||||||||||
Sbjct: 1906132 ctcccacgcggtgtccttcgccgac 1906108
to top
>emb|AL939128.1|SCO939128 Streptomyces coelicolor A3(2) complete genome; segment 25/29
          Length = 296500

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 445    cgcggccgcggccttctcggcggcc 469
              |||||| ||||||||||||||||||
Sbjct: 278847 cgcggcggcggccttctcggcggcc 278823
to top
>emb|AL806526.4| Mouse DNA sequence from clone RP23-123F24 on chromosome 11 Contains a
             novel gene and a ribosomal protein S20 (Rps20) pseudogene,
             complete sequence
          Length = 128168

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 104   aaacattcatggaagaaaagctatg 128
             |||||||||||| ||||||||||||
Sbjct: 15327 aaacattcatgggagaaaagctatg 15303
to top
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 449      gccgcggccttctcggcggcc 469
                |||||||||||||||||||||
Sbjct: 26686097 gccgcggccttctcggcggcc 26686077
to top
>gb|AY972063.1| Gordonia rubripertincta strain JCM 3199 DNA gyrase subunit B (gyrB)
           gene, partial cds
          Length = 1273

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 444 tcgcggccgcggccttctcgg 464
           |||||||||||||||||||||
Sbjct: 432 tcgcggccgcggccttctcgg 412
to top
>gb|AY972062.1| Gordonia rubripertincta strain DSM 43248 DNA gyrase subunit B
           (gyrB) gene, partial cds
          Length = 1274

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 444 tcgcggccgcggccttctcgg 464
           |||||||||||||||||||||
Sbjct: 432 tcgcggccgcggccttctcgg 412
to top
>gb|AY972061.1| Gordonia rubripertincta strain DSM 43197 DNA gyrase subunit B
           (gyrB) gene, partial cds
          Length = 1284

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 444 tcgcggccgcggccttctcgg 464
           |||||||||||||||||||||
Sbjct: 430 tcgcggccgcggccttctcgg 410
to top
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 204     ccgcgccggtgaccttgtccttcac 228
               |||||||||||||| ||||||||||
Sbjct: 5690764 ccgcgccggtgaccatgtccttcac 5690788



 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 447     cggccgcggccttctcggcg 466
               ||||||||||||||||||||
Sbjct: 1492318 cggccgcggccttctcggcg 1492299
to top
>gb|AC147245.3| Mus musculus BAC clone RP23-462E12 from 12, complete sequence
          Length = 179735

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 231   ctccgaccttctccttcaccttctc 255
             ||||||||||||||||| |||||||
Sbjct: 98803 ctccgaccttctccttccccttctc 98827
to top
>gb|AY067356.1| Schmidtea mediterranea clone H.99.12d(T3) unknown mRNA sequence
          Length = 630

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 473 tccttggctgccgctgccttc 493
           |||||||||||||||||||||
Sbjct: 443 tccttggctgccgctgccttc 463
to top
>gb|CP000148.1| Geobacter metallireducens GS-15, complete genome
          Length = 3997420

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 413     gccgcctcggcgttcttccacgcg 436
               ||||||||||||||||||| ||||
Sbjct: 3634825 gccgcctcggcgttcttccccgcg 3634802
to top
>ref|NM_197250.1| Oryza sativa (japonica cultivar-group) hypothetical protein
           (OSJNBa0062C05.24), mRNA
          Length = 1404

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 235 gaccttctccttcaccttct 254
           ||||||||||||||||||||
Sbjct: 156 gaccttctccttcaccttct 137
to top
>ref|NM_189197.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 468

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 449 gccgcggccttctcggcggc 468
           ||||||||||||||||||||
Sbjct: 116 gccgcggccttctcggcggc 97
to top
>gb|U70213.1|MCU70213 Mesocestoides corti heat shock 70kDa protein (hsp70) mRNA, partial
            cds
          Length = 1993

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 238  cttctccttcaccttctcgt 257
            ||||||||||||||||||||
Sbjct: 1665 cttctccttcaccttctcgt 1646
to top
>gb|AC084023.8| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0062C05
              map S21174S, complete sequence
          Length = 178867

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 235    gaccttctccttcaccttct 254
              ||||||||||||||||||||
Sbjct: 125300 gaccttctccttcaccttct 125281
to top
>ref|XM_421787.1| PREDICTED: Gallus gallus similar to eukaryotic translation initiation
            factor 3, subunit 10 theta, 150/170kDa; eukaryotic
            translation initiation factor 3, subunit 10 (theta,
            170kD); Eukaryotic translation initiation factor 3,
            subunit 10, 170kD; eukaryotic translation initia...
            (LOC423927), mRNA
          Length = 5449

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 167  tcttccttgcgttgcttctt 186
            ||||||||||||||||||||
Sbjct: 2684 tcttccttgcgttgcttctt 2665
to top
>ref|XM_591532.2| PREDICTED: Bos taurus similar to protein kinase C and casein kinase
            substrate in neurons 2, transcript variant 1 (LOC540107),
            mRNA
          Length = 3135

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 390  ccttctcactgacggtgctc 409
            ||||||||||||||||||||
Sbjct: 1151 ccttctcactgacggtgctc 1132
to top
>ref|XM_882120.1| PREDICTED: Bos taurus similar to protein kinase C and casein kinase
            substrate in neurons 2, transcript variant 10
            (LOC540107), mRNA
          Length = 3051

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 390  ccttctcactgacggtgctc 409
            ||||||||||||||||||||
Sbjct: 1112 ccttctcactgacggtgctc 1093
to top
>ref|XM_882093.1| PREDICTED: Bos taurus similar to protein kinase C and casein kinase
            substrate in neurons 2, transcript variant 8 (LOC540107),
            mRNA
          Length = 3135

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 390  ccttctcactgacggtgctc 409
            ||||||||||||||||||||
Sbjct: 1142 ccttctcactgacggtgctc 1123
to top
>ref|XM_868879.1| PREDICTED: Bos taurus similar to protein kinase C and casein kinase
            substrate in neurons 2, transcript variant 2 (LOC540107),
            mRNA
          Length = 3141

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 390  ccttctcactgacggtgctc 409
            ||||||||||||||||||||
Sbjct: 1157 ccttctcactgacggtgctc 1138
to top
>gb|AC112254.6| Homo sapiens BAC clone RP11-1156I21 from 4, complete sequence
          Length = 91840

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 262   ctcgtttgccttccccttggccgcctcc 289
             |||| |||||||||| ||||||||||||
Sbjct: 13666 ctcggttgccttcccattggccgcctcc 13639
to top
>gb|BC114745.1| Bos taurus cDNA clone MGC:137898 IMAGE:8083530, complete cds
          Length = 3354

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 390  ccttctcactgacggtgctc 409
            ||||||||||||||||||||
Sbjct: 1333 ccttctcactgacggtgctc 1314
to top
>gb|AC068768.31| Homo sapiens 12 BAC RP11-282O18 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 87758

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 92    tccaacactgaaaaacattc 111
             ||||||||||||||||||||
Sbjct: 40204 tccaacactgaaaaacattc 40185
to top
>emb|X52522.1|RGHUPSL Rhodocyclus gelatinosus hupSL genes for uptake-hydrogenase subunits
          Length = 3991

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 447  cggccgcggccttctcggcggccg 470
            |||||||||||||| |||||||||
Sbjct: 3879 cggccgcggccttcacggcggccg 3902
to top
>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 441    ccttcgcggccgcggccttc 460
              ||||||||||||||||||||
Sbjct: 736326 ccttcgcggccgcggccttc 736345
to top
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 449     gccgcggccttctcggcggc 468
               ||||||||||||||||||||
Sbjct: 3635464 gccgcggccttctcggcggc 3635445
to top
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 235      gaccttctccttcaccttct 254
                ||||||||||||||||||||
Sbjct: 18827564 gaccttctccttcaccttct 18827545
to top
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 449      gccgcggccttctcggcggc 468
                ||||||||||||||||||||
Sbjct: 11066670 gccgcggccttctcggcggc 11066689
to top
>gb|AC007086.10|AC007086 Drosophila melanogaster, chromosome 2R, region 45A-46A, BAC clone
             BACR14J24, complete sequence
          Length = 186241

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 236   accttctccttcaccttctc 255
             ||||||||||||||||||||
Sbjct: 76794 accttctccttcaccttctc 76775
to top
>gb|AC019196.10| Homo sapiens BAC clone RP11-356G6 from 2, complete sequence
          Length = 175504

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 99    ctgaaaaacattcatggaag 118
             ||||||||||||||||||||
Sbjct: 60412 ctgaaaaacattcatggaag 60431
to top
>dbj|AP003578.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0682B08
          Length = 138376

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 449   gccgcggccttctcggcggc 468
             ||||||||||||||||||||
Sbjct: 95552 gccgcggccttctcggcggc 95571
to top
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 408     tcttcgccgcctcggcgttc 427
               ||||||||||||||||||||
Sbjct: 1872475 tcttcgccgcctcggcgttc 1872494
to top
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome
          Length = 7036071

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 440    tccttcgcggccgcggccttctcggcgg 467
              |||||| ||||||||||| |||||||||
Sbjct: 916433 tccttctcggccgcggccatctcggcgg 916460
to top
>gb|AY972058.1| Gordonia amicalis strain CC-S5-7 DNA gyrase subunit B (gyrB) gene,
           partial cds
          Length = 1274

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 445 cgcggccgcggccttctcgg 464
           ||||||||||||||||||||
Sbjct: 431 cgcggccgcggccttctcgg 412
to top
>dbj|AK073246.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033005A18, full
           insert sequence
          Length = 2211

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 449 gccgcggccttctcggcggc 468
           ||||||||||||||||||||
Sbjct: 176 gccgcggccttctcggcggc 157
to top
>dbj|AK066192.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013054P19, full
           insert sequence
          Length = 1979

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 449 gccgcggccttctcggcggc 468
           ||||||||||||||||||||
Sbjct: 182 gccgcggccttctcggcggc 163
to top
>emb|CR925810.4| Zebrafish DNA sequence from clone DKEY-250M6 in linkage group 10,
              complete sequence
          Length = 197451

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 93     ccaacactgaaaaacattca 112
              ||||||||||||||||||||
Sbjct: 118064 ccaacactgaaaaacattca 118045
to top
>gb|AE003833.4| Drosophila melanogaster chromosome 2R, section 17 of 73 of the complete
              sequence
          Length = 297107

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 236    accttctccttcaccttctc 255
              ||||||||||||||||||||
Sbjct: 182357 accttctccttcaccttctc 182376
to top
>dbj|AP003171.2| Homo sapiens genomic DNA, chromosome 11q clone:RP11-676F20, complete
             sequence
          Length = 137000

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 68    aacataagagagaaaaaata 87
             ||||||||||||||||||||
Sbjct: 40584 aacataagagagaaaaaata 40603
to top
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 235      gaccttctccttcaccttct 254
                ||||||||||||||||||||
Sbjct: 18838818 gaccttctccttcaccttct 18838799
to top
>emb|BX005375.9| Zebrafish DNA sequence from clone CH211-207N2 in linkage group 17,
              complete sequence
          Length = 214178

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 67     gaacataagagagaaaaaat 86
              ||||||||||||||||||||
Sbjct: 128540 gaacataagagagaaaaaat 128559
to top
>emb|AL845434.11| Mouse DNA sequence from clone RP23-211O3 on chromosome 2, complete
             sequence
          Length = 131971

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 110   tcatggaagaaaagctatgg 129
             ||||||||||||||||||||
Sbjct: 60698 tcatggaagaaaagctatgg 60717
to top
>dbj|AP006099.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT03D07, TM0180a,
             complete sequence
          Length = 76444

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 65    aggaacataagagagaaaaa 84
             ||||||||||||||||||||
Sbjct: 62408 aggaacataagagagaaaaa 62427


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,687,586
Number of Sequences: 3902068
Number of extensions: 4687586
Number of successful extensions: 137809
Number of sequences better than 10.0: 54
Number of HSP's better than 10.0 without gapping: 55
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 136299
Number of HSP's gapped (non-prelim): 1498
length of query: 503
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 481
effective length of database: 17,147,199,772
effective search space: 8247803090332
effective search space used: 8247803090332
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top