ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart23b01 |
|---|---|
| Clone Library Name | barley_pub |
>DFRA_MAIZE (P51108) Dihydroflavonol-4-reductase (EC 1.1.1.219) (DFR)| (Dihydrokaempferol 4-reductase) Length = 357 Score = 43.9 bits (102), Expect = 9e-05 Identities = 24/79 (30%), Positives = 42/79 (53%), Gaps = 2/79 (2%) Frame = -1 Query: 408 YLCAERVLHRQDVVHILAKLFPEYPVPTRCSDEVNPRKQPYKMSNQKLQDLG--LKFTPV 235 Y+C+ + + +L +PEY VP R + QP + S++KLQDLG ++ + Sbjct: 256 YVCSSHDVTIHGLAAMLRDRYPEYDVPQRFPG-IQDDLQPVRFSSKKLQDLGFTFRYKTL 314 Query: 234 NDSLYETVKSLQEKGHLPV 178 D +++ QEKG +P+ Sbjct: 315 EDMFDAAIRTCQEKGLIPL 333
>DFRA_HORVU (P51106) Dihydroflavonol-4-reductase (EC 1.1.1.219) (DFR)| (Dihydrokaempferol 4-reductase) Length = 354 Score = 40.4 bits (93), Expect = 0.001 Identities = 24/90 (26%), Positives = 45/90 (50%), Gaps = 1/90 (1%) Frame = -1 Query: 408 YLCAERVLHRQDVVHILAKLFPEYPVPTRCSDEVNPRKQPYKMSNQKLQDLGLKFTPVND 229 Y+C+ + +L FPEY +P + + V+ QP S++KL D G F + Sbjct: 251 YICSSHDATIHGLARMLQDRFPEYDIPQKFAG-VDDNLQPIHFSSKKLLDHGFSFRYTTE 309 Query: 228 SLYE-TVKSLQEKGHLPVPRKDILAPQLDG 142 +++ + + ++KG +P+ D+ AP G Sbjct: 310 DMFDAAIHTCRDKGLIPL--GDVPAPAAGG 337
>DFRA_CALCH (P51103) Dihydroflavonol-4-reductase (EC 1.1.1.219) (DFR)| (Dihydrokaempferol 4-reductase) Length = 364 Score = 40.0 bits (92), Expect = 0.001 Identities = 22/83 (26%), Positives = 43/83 (51%), Gaps = 1/83 (1%) Frame = -1 Query: 408 YLCAERVLHRQDVVHILAKLFPEYPVPTRCSDEVNPRKQPYKMSNQKLQDLGLKFT-PVN 232 Y+C+++ + ++ + +PEY VPT+ + ++ S++KL D+G KF + Sbjct: 252 YICSKQDATIHQLARMIKQKWPEYHVPTQFAG-IDEELPTVSFSSKKLIDMGFKFKYDLE 310 Query: 231 DSLYETVKSLQEKGHLPVPRKDI 163 D + S +EKG LP ++ Sbjct: 311 DMFKGAIDSCKEKGFLPYSTNEV 333
>DFRA_DIACA (P51104) Dihydroflavonol-4-reductase (EC 1.1.1.219) (DFR)| (Dihydrokaempferol 4-reductase) Length = 360 Score = 38.9 bits (89), Expect = 0.003 Identities = 24/67 (35%), Positives = 37/67 (55%), Gaps = 1/67 (1%) Frame = -1 Query: 375 DVVHILAKLFPEYPVPTRCSDEVNPRKQPYKMSNQKLQDLGLKFT-PVNDSLYETVKSLQ 199 D+ +L + +PEY VPT+ D Q + S++KL DLG +F + D V+S + Sbjct: 278 DIAKMLREEYPEYNVPTKFKDYKEDMGQ-VQFSSKKLTDLGFEFKYGLKDMYTAAVESCR 336 Query: 198 EKGHLPV 178 KG LP+ Sbjct: 337 AKGLLPL 343
>DFRA_VITVI (P51110) Dihydroflavonol-4-reductase (EC 1.1.1.219) (DFR)| (Dihydrokaempferol 4-reductase) Length = 337 Score = 33.1 bits (74), Expect = 0.16 Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 1/76 (1%) Frame = -1 Query: 408 YLCAERVLHRQDVVHILAKLFPEYPVPTRCSDEVNPRKQPYKMSNQKLQDLGLKFT-PVN 232 Y+C+ D+ +L + +PEY +PT V+ + S++KL DLG +F + Sbjct: 251 YICSSHDCIILDLAKMLREKYPEYNIPTEFKG-VDENLKSVCFSSKKLTDLGFEFKYSLE 309 Query: 231 DSLYETVKSLQEKGHL 184 D V + + KG L Sbjct: 310 DMFTGAVDTCRAKGLL 325
>YYAE_BACSU (P37519) Hypothetical protein yyaE| Length = 667 Score = 31.6 bits (70), Expect = 0.47 Identities = 15/42 (35%), Positives = 25/42 (59%) Frame = -1 Query: 288 YKMSNQKLQDLGLKFTPVNDSLYETVKSLQEKGHLPVPRKDI 163 ++ S Q+ ++GL D T++ L+EKGHLP+P K + Sbjct: 468 FEYSTQEFLEMGLSSLEAEDV---TLERLKEKGHLPLPVKQV 506
>DFRA_GERHY (P51105) Dihydroflavonol-4-reductase (EC 1.1.1.219) (DFR)| (Dihydrokaempferol 4-reductase) Length = 366 Score = 31.6 bits (70), Expect = 0.47 Identities = 20/77 (25%), Positives = 36/77 (46%), Gaps = 1/77 (1%) Frame = -1 Query: 408 YLCAERVLHRQDVVHILAKLFPEYPVPTRCSDEVNPRKQPYKMSNQKLQDLGLKFT-PVN 232 Y+C+ + I+ +PEY +PT+ ++ S++KL D G +F + Sbjct: 252 YICSSHDATIHQLAKIIKDKWPEYYIPTKFPG-IDEELPIVSFSSKKLIDTGFEFKYNLE 310 Query: 231 DSLYETVKSLQEKGHLP 181 D + + +EKG LP Sbjct: 311 DMFKGAIDTCREKGLLP 327
>DFRA_PETHY (P14720) Dihydroflavonol-4-reductase (EC 1.1.1.219) (DFR)| (Dihydrokaempferol 4-reductase) Length = 380 Score = 31.6 bits (70), Expect = 0.47 Identities = 19/77 (24%), Positives = 39/77 (50%), Gaps = 1/77 (1%) Frame = -1 Query: 408 YLCAERVLHRQDVVHILAKLFPEYPVPTRCSDEVNPRKQPYKMSNQKLQDLGLKFTPVND 229 ++C+ DV ++ + +PEY VPT ++ S++KL D+G +F + Sbjct: 261 FICSSHHAIIYDVAKMVREKWPEYYVPTEFKG-IDKDLPVVSFSSKKLTDMGFQFKYTLE 319 Query: 228 SLYE-TVKSLQEKGHLP 181 +Y+ + + ++K LP Sbjct: 320 DMYKGAIDTCRQKQLLP 336
>KHSE_PYRAB (Q9UZV7) Homoserine kinase (EC 2.7.1.39) (HSK) (HK)| Length = 294 Score = 30.8 bits (68), Expect = 0.80 Identities = 23/81 (28%), Positives = 37/81 (45%) Frame = -1 Query: 387 LHRQDVVHILAKLFPEYPVPTRCSDEVNPRKQPYKMSNQKLQDLGLKFTPVNDSLYETVK 208 +HR DV + + PE VPT+ + + P K P K + + L + + ETV Sbjct: 153 VHRVDVELNVVVVLPEVEVPTKEARRIVPEKVPLKDAIKNLAMASSLVLALKEGDIETVG 212 Query: 207 SLQEKGHLPVPRKDILAPQLD 145 L + +L +P + L P D Sbjct: 213 RLLD-DNLALPYRKKLMPWFD 232
>DFRA_ANTMA (P14721) Dihydroflavonol-4-reductase (EC 1.1.1.219) (DFR)| (Dihydrokaempferol 4-reductase) Length = 446 Score = 30.0 bits (66), Expect = 1.4 Identities = 18/82 (21%), Positives = 39/82 (47%), Gaps = 1/82 (1%) Frame = -1 Query: 408 YLCAERVLHRQDVVHILAKLFPEYPVPTRCSDEVNPRKQPYKMSNQKLQDLGLKFT-PVN 232 Y+C+ D+ ++ + +PEY +P + ++ S++K+ +G F + Sbjct: 263 YICSSHDATIYDIAKLITENWPEYHIPDE-FEGIDKDIPVVSFSSKKMIGMGFIFKYTLE 321 Query: 231 DSLYETVKSLQEKGHLPVPRKD 166 D + + + +EKG LP K+ Sbjct: 322 DMVRGAIDTCREKGMLPYSTKN 343
>DFRA_LYCES (P51107) Dihydroflavonol-4-reductase (EC 1.1.1.219) (DFR)| (Dihydrokaempferol 4-reductase) Length = 379 Score = 29.6 bits (65), Expect = 1.8 Identities = 18/77 (23%), Positives = 39/77 (50%), Gaps = 1/77 (1%) Frame = -1 Query: 408 YLCAERVLHRQDVVHILAKLFPEYPVPTRCSDEVNPRKQPYKMSNQKLQDLGLKFTPVND 229 ++C+ DV ++ + +PEY VPT ++ S++KL D+ +F + Sbjct: 260 FICSSHHAIIYDVAKMVRQKWPEYYVPTEFKG-IDKDLALVSFSSKKLMDIKFQFKHTLE 318 Query: 228 SLYE-TVKSLQEKGHLP 181 +Y+ +++ ++K LP Sbjct: 319 DMYKGAIETCRQKQLLP 335
>YDS3_SCHPO (O14179) Hypothetical UPF0023 protein C4F8.03 in chromosome I| Length = 246 Score = 29.3 bits (64), Expect = 2.3 Identities = 16/57 (28%), Positives = 23/57 (40%), Gaps = 3/57 (5%) Frame = -1 Query: 333 VPTRCSDEVNPRKQPYKMSNQKLQDLGLKFTP---VNDSLYETVKSLQEKGHLPVPR 172 V C D + R P + + L D G + E +K LQEK +P+ R Sbjct: 115 VTAMCMDPNSKRPYPASIIEKALSDCGFSVSTSKTAKSQALEAIKKLQEKNEIPIVR 171
>HOOK1_MOUSE (Q8BIL5) Hook homolog 1| Length = 728 Score = 29.3 bits (64), Expect = 2.3 Identities = 28/88 (31%), Positives = 39/88 (44%), Gaps = 4/88 (4%) Frame = -1 Query: 384 HRQDVVHILAK----LFPEYPVPTRCSDEVNPRKQPYKMSNQKLQDLGLKFTPVNDSLYE 217 HR D + LA+ L E V SD+ N + ++ QKLQDL + L + Sbjct: 287 HRNDELTSLAEETRALKDEIDVLRATSDKANKLESTVEVYRQKLQDL--------NDLRK 338 Query: 216 TVKSLQEKGHLPVPRKDILAPQLDGATA 133 VKSLQE + + L +L A A Sbjct: 339 QVKSLQETNMMYMHNTVSLEEELKKANA 366
>STC2_MACNE (O97561) Stanniocalcin-2 precursor (STC-2)| Length = 302 Score = 28.5 bits (62), Expect = 4.0 Identities = 18/55 (32%), Positives = 28/55 (50%) Frame = -1 Query: 405 LCAERVLHRQDVVHILAKLFPEYPVPTRCSDEVNPRKQPYKMSNQKLQDLGLKFT 241 +CAER+ H + +LA + P R +D NP + P S+Q+ L L+ T Sbjct: 1 MCAERLGHFMTLALVLATIDP-----ARGTDATNPPEGPQDRSSQQKGRLSLQNT 50
>RNZ1_HUMAN (Q9H777) Zinc phosphodiesterase ELAC protein 1 (EC 3.1.26.11)| (Ribonuclease Z 1) (RNase Z 1) (tRNase Z 1) (tRNA 3 endonuclease 1) (ElaC homolog protein 1) (Deleted in Ma29) Length = 363 Score = 28.5 bits (62), Expect = 4.0 Identities = 16/53 (30%), Positives = 29/53 (54%) Frame = -1 Query: 300 RKQPYKMSNQKLQDLGLKFTPVNDSLYETVKSLQEKGHLPVPRKDILAPQLDG 142 +K+P K++ QKL+DLG+ P L + + E G + + +D+L + G Sbjct: 194 KKRPGKLNAQKLKDLGVPPGPAYGKLKNGISVVLENG-VTISPQDVLKKPIVG 245
>BACC_BACLI (O68008) Bacitracin synthetase 3 (BA3) [Includes: ATP-dependent| isoleucine adenylase (IleA) (Isoleucine activase); ATP-dependent D-phenylalanine adenylase (D-PheA) (D-phenylalanine activase); ATP-dependent histidine adenylase (HisA) (Histidine Length = 6359 Score = 28.1 bits (61), Expect = 5.2 Identities = 12/28 (42%), Positives = 19/28 (67%) Frame = -1 Query: 408 YLCAERVLHRQDVVHILAKLFPEYPVPT 325 Y+ +ER + ++D+ LAK PEY VP+ Sbjct: 5984 YVVSERDITQKDIKTFLAKELPEYMVPS 6011
>ENO_BUCAP (Q8K9E0) Enolase (EC 4.2.1.11) (2-phosphoglycerate dehydratase)| (2-phospho-D-glycerate hydro-lyase) Length = 434 Score = 28.1 bits (61), Expect = 5.2 Identities = 18/63 (28%), Positives = 32/63 (50%) Frame = -1 Query: 378 QDVVHILAKLFPEYPVPTRCSDEVNPRKQPYKMSNQKLQDLGLKFTPVNDSLYETVKSLQ 199 Q++ H L KL +YP+ S E + ++ + ++LG V D L+ T K++ Sbjct: 272 QELTHYLKKLSNKYPI---ISIEDGQDESDWEGFLYQTKELGNSLQLVGDDLFVTNKNIL 328 Query: 198 EKG 190 +KG Sbjct: 329 KKG 331
>HOOK1_HUMAN (Q9UJC3) Hook homolog 1 (h-hook1) (hHK1)| Length = 728 Score = 28.1 bits (61), Expect = 5.2 Identities = 27/88 (30%), Positives = 39/88 (44%), Gaps = 4/88 (4%) Frame = -1 Query: 384 HRQDVVHILAK----LFPEYPVPTRCSDEVNPRKQPYKMSNQKLQDLGLKFTPVNDSLYE 217 HR D + LA+ L E V SD+ N + ++ QKLQDL + L + Sbjct: 287 HRNDELTSLAEETRALKDEIDVLRATSDKANKLESTVEIYRQKLQDL--------NDLRK 338 Query: 216 TVKSLQEKGHLPVPRKDILAPQLDGATA 133 VK+LQE + + L +L A A Sbjct: 339 QVKTLQETNMMYMHNTVSLEEELKKANA 366
>SYGB_BACHD (Q9KD48) Glycyl-tRNA synthetase beta chain (EC 6.1.1.14)| (Glycine--tRNA ligase beta chain) (GlyRS) Length = 693 Score = 27.7 bits (60), Expect = 6.8 Identities = 25/77 (32%), Positives = 37/77 (48%) Frame = -1 Query: 390 VLHRQDVVHILAKLFPEYPVPTRCSDEVNPRKQPYKMSNQKLQDLGLKFTPVNDSLYETV 211 V+ D + +A F +PT D R+Q + Q L D L V++ L ETV Sbjct: 451 VVSLADKLDTIAACFGIGLIPTGSQDPYALRRQAAGVV-QILLDHELDLD-VDELLLETV 508 Query: 210 KSLQEKGHLPVPRKDIL 160 + LQEK L VP +++ Sbjct: 509 EQLQEKELLTVPESEVV 525
>VLLY_VIBVU (O06695) Hemolysin vllY| Length = 357 Score = 27.7 bits (60), Expect = 6.8 Identities = 17/45 (37%), Positives = 22/45 (48%) Frame = -1 Query: 273 QKLQDLGLKFTPVNDSLYETVKSLQEKGHLPVPRKDILAPQLDGA 139 Q L+D G+ F P D+ Y+ V S E V R L +DGA Sbjct: 256 QTLRDRGMDFMPTPDTYYDKVDSRVEGHKEDVSRLRDLRILIDGA 300
>ASPP2_MOUSE (Q8CG79) Apoptosis-stimulating of p53 protein 2 (Tumor suppressor| p53-binding protein 2) (p53BP2) (53BP2) (Fragment) Length = 1088 Score = 27.7 bits (60), Expect = 6.8 Identities = 20/85 (23%), Positives = 41/85 (48%), Gaps = 10/85 (11%) Frame = -1 Query: 378 QDVVHILAKLFPEYPVPTRCSDEVNPRKQPYK----MSNQKLQDLGLKFTPVNDSLYETV 211 Q V L +L+ E + + + E N + Q + N ++ + + + + D L++ Sbjct: 217 QSAVAELDRLYKELQLRNKLNQEQNAKLQQQRECLNKRNSEVAVMDKRVSELRDRLWKKK 276 Query: 210 KSLQEKGHLPV------PRKDILAP 154 +LQ+K +LPV P++ + AP Sbjct: 277 AALQQKENLPVSPDGNLPQQAVSAP 301
>SALL2_MOUSE (Q9QX96) Sal-like protein 2 (Spalt-like protein 2) (MSal-2)| Length = 1004 Score = 27.3 bits (59), Expect = 8.9 Identities = 11/28 (39%), Positives = 18/28 (64%) Frame = +1 Query: 178 HREVPLLLEALHRLVQRVVHRSELEAKI 261 H +PL+LE L L QR +H+ ++ +I Sbjct: 176 HLNIPLILEELRVLQQRQIHQMQMTEQI 203
>ACVS_CEPAC (P25464) N-(5-amino-5-carboxypentanoyl)-L-cysteinyl-D-valine| synthase (EC 6.3.2.26) (Delta-(L-alpha-aminoadipyl)-L-cysteinyl-D-valine synthetase) (ACV synthetase) (ACVS) Length = 3712 Score = 27.3 bits (59), Expect = 8.9 Identities = 12/29 (41%), Positives = 16/29 (55%) Frame = -1 Query: 408 YLCAERVLHRQDVVHILAKLFPEYPVPTR 322 Y+C E + D++ L K P Y VPTR Sbjct: 726 YVCDEGHIPEGDLLSFLEKKLPRYMVPTR 754
>SALL2_HUMAN (Q9Y467) Sal-like protein 2 (Zinc finger protein SALL2) (HSal2)| Length = 1007 Score = 27.3 bits (59), Expect = 8.9 Identities = 11/28 (39%), Positives = 18/28 (64%) Frame = +1 Query: 178 HREVPLLLEALHRLVQRVVHRSELEAKI 261 H +PL+LE L L QR +H+ ++ +I Sbjct: 176 HLNIPLILEELRVLQQRQIHQMQMTEQI 203 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 49,011,820 Number of Sequences: 219361 Number of extensions: 864705 Number of successful extensions: 2603 Number of sequences better than 10.0: 24 Number of HSP's better than 10.0 without gapping: 2566 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2602 length of database: 80,573,946 effective HSP length: 111 effective length of database: 56,224,875 effective search space used: 1349397000 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
