>LGT_WOLPM (Q73H08) Prolipoprotein diacylglyceryl transferase (EC 2.4.99.-)|
          Length = 263

 Score = 32.0 bits (71), Expect = 0.80
 Identities = 19/49 (38%), Positives = 27/49 (55%)
 Frame = -2

Query: 158 YCFSPVEIPDGVEGCRSLHGLAVGMN*HRVLVLVVIETRKHTILGHWAL 12
           Y  +P+EI    EG  S HG A+G     VL+ V+I  ++H I   +AL
Sbjct: 75  YISNPIEILKTWEGGMSFHGGAIG-----VLLAVIISCKRHNIPTFYAL 118

>RBP26_HUMAN (Q68DN6) Ran-binding protein 2-like 6 (RanBP2L6)|
          Length = 1748

 Score = 32.0 bits (71), Expect = 0.80
 Identities = 13/55 (23%), Positives = 26/55 (47%)
 Frame = -2

Query: 263 WRSPQTTMRVRITRATTSLSNANEVATKLQTAIPGYCFSPVEIPDGVEGCRSLHG 99
           W   Q ++R  I +   +++  N   +  +   P   + P  +PDG +G ++ HG
Sbjct: 794 WAEDQNSLRKMICQEVKAITKLNSSKSASRHRWPTENYGPDSVPDGYQGSQTFHG 848

>MATRX_MEASI (P26034) Matrix protein|
          Length = 335

 Score = 30.0 bits (66), Expect = 3.1
 Identities = 18/49 (36%), Positives = 25/49 (51%)
 Frame = -2

Query: 335 VRKKSGVNQTVVARRNPKAKCLTEWRSPQTTMRVRITRATTSLSNANEV 189
           VR+ +G+N+ +V   NP    LT WR   T         T S+ NAN+V
Sbjct: 101 VRRIAGLNEKLVFYNNPPLTLLTPWRKVLT---------TGSVFNANQV 140

>RTDR1_HUMAN (Q9UHP6) Rhabdoid tumor deletion region protein 1|
          Length = 348

 Score = 29.3 bits (64), Expect = 5.2
 Identities = 16/40 (40%), Positives = 21/40 (52%)
 Frame = -2

Query: 257 SPQTTMRVRITRATTSLSNANEVATKLQTAIPGYCFSPVE 138
           SP T  R+  T+A T L+ A E    LQT +P +    VE
Sbjct: 283 SPMTIARLNATKALTMLAEAPEGRKALQTHVPTFRAMEVE 322

>MID2_SCHPO (Q9P7Y8) Septin ring organizing protein mid2|
          Length = 704

 Score = 29.3 bits (64), Expect = 5.2
 Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 6/61 (9%)
 Frame = +3

Query: 3   KLTERPMPQYSMFPSLY------YYKNKHPMLVHADSQTMERPTSFHTIRNLYW*KTISR 164
           K+   P P+++   S +      Y   ++  +VHA SQ  E  TS   + + Y  +++SR
Sbjct: 315 KVVSLPDPRFTNVLSAFDALTRTYLLRQNSKVVHATSQKQEMQTSRRVVNSCYMPESLSR 374

Query: 165 N 167
           N
Sbjct: 375 N 375

>US6NL_MOUSE (Q80XC3) USP6 N-terminal-like protein|
          Length = 819

 Score = 29.3 bits (64), Expect = 5.2
 Identities = 23/115 (20%), Positives = 43/115 (37%)
 Frame = -2

Query: 443 KGGSRWPSSICGGRKDSKQPRSVQPRSA*NAKRRSSVRKKSGVNQTVVARRNPKAKCLTE 264
           + G     S+  G K+ K     Q + +   +  S     +  NQ   A  N + + + +
Sbjct: 425 RAGQSRRKSVDEGSKNLKHEAESQRKPSPGMQDSSRHYNHAAANQNSNAISNVRKEFMPK 484

Query: 263 WRSPQTTMRVRITRATTSLSNANEVATKLQTAIPGYCFSPVEIPDGVEGCRSLHG 99
           WR P     +  T        ++     L  AIPG   +   +P+  +  ++L G
Sbjct: 485 WRKPSDASAIERTTKYAVEGKSHSALPALPVAIPG--SAETRLPNSRQKMKALDG 537

>Y1567_ARCFU (O28705) Hypothetical protein AF1567 precursor|
          Length = 295

 Score = 28.9 bits (63), Expect = 6.8
 Identities = 15/54 (27%), Positives = 31/54 (57%)
 Frame = +3

Query: 45  SLYYYKNKHPMLVHADSQTMERPTSFHTIRNLYW*KTISRNGGLQFSRNFIGIA 206
           S  YY N   + +   + ++E+ +  + + N  + K I +NGG+ ++RNF G++
Sbjct: 128 SFEYYPNTGYLRILFKNSSLEKASILNGLLNYSYQK-IEKNGGVFYARNFDGLS 180

>SPAG5_HUMAN (Q96R06) Sperm-associated antigen 5 (Astrin) (Mitotic|
            spindle-associated protein p126) (MAP126) (Deepest)
          Length = 1193

 Score = 28.9 bits (63), Expect = 6.8
 Identities = 14/66 (21%), Positives = 31/66 (46%)
 Frame = -2

Query: 293  RNPKAKCLTEWRSPQTTMRVRITRATTSLSNANEVATKLQTAIPGYCFSPVEIPDGVEGC 114
            +N K K + +++S +  +   + R+   L   +++   +   +       + IP+ V GC
Sbjct: 1130 KNEKEKLMIKFQSHRNILEENLRRSDKELEKLDDIVQHIYKTL-------LSIPEVVRGC 1182

Query: 113  RSLHGL 96
            + L GL
Sbjct: 1183 KELQGL 1188

>V2A_PSVJ (P28727) RNA-directed RNA polymerase 2A (EC 2.7.7.48) (protein 2A)|
          Length = 834

 Score = 28.5 bits (62), Expect = 8.9
 Identities = 11/16 (68%), Positives = 12/16 (75%)
 Frame = -2

Query: 167 IPGYCFSPVEIPDGVE 120
           +PGY F PVE PDG E
Sbjct: 164 VPGYIFLPVERPDGYE 179

>NANA_CLOPE (Q9S4K9) N-acetylneuraminate lyase (EC 4.1.3.3) (N-acetylneuraminic|
           acid aldolase) (N-acetylneuraminate pyruvate-lyase)
           (Sialic acid lyase) (Sialate lyase) (Sialic acid
           aldolase)
          Length = 288

 Score = 28.5 bits (62), Expect = 8.9
 Identities = 13/27 (48%), Positives = 16/27 (59%)
 Frame = +2

Query: 35  YVSESLLLQEQAPDVSSCRQPNHGATD 115
           Y +  L+LQEQ  D   CRQP   AT+
Sbjct: 248 YQTIKLILQEQGVDAGYCRQPMKEATE 274


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 57,924,463
Number of Sequences: 219361
Number of extensions: 977692
Number of successful extensions: 2865
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2774
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2862
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3014947676
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)