ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart23a12
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|BT017968.1| Zea mays clone EL01N0523G07.c mRNA sequence 125 1e-25
2gb|BT018949.1| Zea mays clone Contig108.F mRNA sequence 119 9e-24
3gb|AY108686.1| Zea mays PCO110157 mRNA sequence 119 9e-24
4dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 113 5e-22
5dbj|AP005634.3| Oryza sativa (japonica cultivar-group) genomic D... 113 5e-22
6dbj|AP005909.2| Oryza sativa (japonica cultivar-group) genomic D... 113 5e-22
7dbj|AK105442.1| Oryza sativa (japonica cultivar-group) cDNA clon... 113 5e-22
8dbj|AK072803.1| Oryza sativa (japonica cultivar-group) cDNA clon... 113 5e-22
9gb|AY111595.1| Zea mays CL40218_1 mRNA sequence 94 5e-16
10ref|NM_127087.1| Arabidopsis thaliana unknown protein AT2G15270 ... 50 0.007
11gb|AY079332.1| Arabidopsis thaliana unknown protein (At2g15270) ... 50 0.007
12gb|AY045800.1| Arabidopsis thaliana unknown protein (At2g15270) ... 50 0.007
13gb|AC007267.5| Arabidopsis thaliana chromosome 2 clone F27O10 ma... 50 0.007
14emb|BX821101.1|CNS0AA5P Arabidopsis thaliana Full-length cDNA Co... 50 0.007
15gb|AC116386.9| Mus musculus chromosome 15, clone RP23-37B16, com... 48 0.026
16gb|AC163400.3| Mus musculus chromosome 15, clone RP24-97G4, comp... 48 0.026
17gb|AC146092.2| Pan troglodytes BAC clone RP43-48I3 from 7, compl... 44 0.40
18gb|AC152064.3| Pan troglodytes BAC clone RP43-134I6 from chromos... 44 0.40
19gb|AC091736.2| Homo sapiens chromosome 7 clone RP11-644N4, compl... 44 0.40
20gb|AC175193.2| Sporobolomyces roseus clone JGIBAIF-13I18, comple... 44 0.40
21gb|AC093107.3| Homo sapiens chromosome 7 clone RP11-751K21, comp... 44 0.40
22gb|AY348271.1| Drosophila mimica lethal (2) neighbor of tid (l(2... 42 1.6
23ref|XM_323204.1| Neurospora crassa OR74A hypothetical protein (N... 42 1.6
24ref|XM_952432.1| Neurospora crassa OR74A hypothetical protein (N... 42 1.6
25gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome 42 1.6
26gb|AC104037.3| Homo sapiens chromosome 8, clone RP11-692P18, com... 42 1.6
27emb|AL844604.4| Mouse DNA sequence from clone RP24-318C20 on chr... 42 1.6
28emb|AL773520.3| Mouse DNA sequence from clone RP23-350F23 on chr... 42 1.6
29gb|AC166056.2| Mus musculus BAC clone RP23-462A15 from chromosom... 40 6.3
30gb|AC164613.3| Mus musculus BAC clone RP23-324B8 from chromosome... 40 6.3
31ref|XM_323540.1| Neurospora crassa OR74A hypothetical protein (N... 40 6.3
32ref|XM_956068.1| Neurospora crassa OR74A hypothetical protein (N... 40 6.3
33gb|AC138739.8| Mus musculus chromosome 9, clone RP23-380A10, com... 40 6.3
34emb|AL807368.1|NC62D11 Neurospora crassa DNA linkage group V cos... 40 6.3
35emb|AL807373.1|NC21D9 Neurospora crassa DNA linkage group V cosm... 40 6.3
36emb|AL662785.5| Mouse DNA sequence from clone RP23-186N7 on chro... 40 6.3
37gb|AC026780.5| Homo sapiens chromosome 5 clone CTC-529L17, compl... 40 6.3
38gb|AC034200.6|AC034200 Homo sapiens chromosome 5 clone CTB-135C1... 40 6.3
39gb|AC091393.3| Homo sapiens chromosome 5 clone CTC-571O20, compl... 40 6.3
40dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete g... 40 6.3
41dbj|AB005233.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 40 6.3
42gb|CP000009.1| Gluconobacter oxydans 621H, complete genome 40 6.3
43emb|AL807245.17| Mouse DNA sequence from clone RP23-102B2 on chr... 40 6.3
44gb|AE017221.1| Thermus thermophilus HB27, complete genome 40 6.3 
>gb|BT017968.1| Zea mays clone EL01N0523G07.c mRNA sequence
          Length = 1084

 Score =  125 bits (63), Expect = 1e-25
 Identities = 93/103 (90%)
 Strand = Plus / Minus

                                                                       
Query: 326 tctttcttacgctgcttcttcttttggcgtttcaggcgcttcttggctgtacgctcctcg 385
           |||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||| 
Sbjct: 745 tctttcttacgctgcttcttcttttgccgtttcaggcgcttcttggctgtccgctcctca 686

                                                      
Query: 386 gctgctttgagtctttcctccctccgcagattgaactcggcca 428
           |||||||| |  || |||||||||||||| | |||||| ||||
Sbjct: 685 gctgctttcatcctctcctccctccgcagttcgaactcagcca 643
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>gb|BT018949.1| Zea mays clone Contig108.F mRNA sequence
          Length = 993

 Score =  119 bits (60), Expect = 9e-24
 Identities = 93/104 (89%)
 Strand = Plus / Minus

                                                                       
Query: 320 cgcttttctttcttacgctgcttcttcttttggcgtttcaggcgcttcttggctgtacgc 379
           ||||| |||||||||||||| ||||||||||| ||||||||||||||||||||||| |||
Sbjct: 603 cgcttctctttcttacgctgtttcttcttttgccgtttcaggcgcttcttggctgtccgc 544

                                                       
Query: 380 tcctcggctgctttgagtctttcctccctccgcagattgaactc 423
           ||||| |||||||| |  || |||||||||||||| | ||||||
Sbjct: 543 tcctcagctgctttcatcctctcctccctccgcagttcgaactc 500
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>gb|AY108686.1| Zea mays PCO110157 mRNA sequence
          Length = 514

 Score =  119 bits (60), Expect = 9e-24
 Identities = 93/104 (89%)
 Strand = Plus / Plus

                                                                       
Query: 320 cgcttttctttcttacgctgcttcttcttttggcgtttcaggcgcttcttggctgtacgc 379
           ||||| |||||||||||||| ||||||||||| ||||||||||||||||||||||| |||
Sbjct: 399 cgcttctctttcttacgctgtttcttcttttgccgtttcaggcgcttcttggctgtccgc 458

                                                       
Query: 380 tcctcggctgctttgagtctttcctccctccgcagattgaactc 423
           ||||| |||||||| |  || |||||||||||||| | ||||||
Sbjct: 459 tcctcagctgctttcatcctctcctccctccgcagttcgaactc 502
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9,
              complete sequence
          Length = 22696651

 Score =  113 bits (57), Expect = 5e-22
 Identities = 78/85 (91%)
 Strand = Plus / Minus

                                                                          
Query: 326    tctttcttacgctgcttcttcttttggcgtttcaggcgcttcttggctgtacgctcctcg 385
              |||||||| ||||||||||||||||||||||||||||||||||| ||||| |||||||| 
Sbjct: 440254 tctttcttccgctgcttcttcttttggcgtttcaggcgcttctttgctgtccgctcctct 440195

                                       
Query: 386    gctgctttgagtctttcctccctcc 410
              ||| |||| || |||||||||||||
Sbjct: 440194 gcttcttttagcctttcctccctcc 440170
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>dbj|AP005634.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0584D02
          Length = 147234

 Score =  113 bits (57), Expect = 5e-22
 Identities = 78/85 (91%)
 Strand = Plus / Minus

                                                                         
Query: 326   tctttcttacgctgcttcttcttttggcgtttcaggcgcttcttggctgtacgctcctcg 385
             |||||||| ||||||||||||||||||||||||||||||||||| ||||| |||||||| 
Sbjct: 19025 tctttcttccgctgcttcttcttttggcgtttcaggcgcttctttgctgtccgctcctct 18966

                                      
Query: 386   gctgctttgagtctttcctccctcc 410
             ||| |||| || |||||||||||||
Sbjct: 18965 gcttcttttagcctttcctccctcc 18941
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>dbj|AP005909.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OSJNBa0006G10
          Length = 156293

 Score =  113 bits (57), Expect = 5e-22
 Identities = 78/85 (91%)
 Strand = Plus / Minus

                                                                         
Query: 326   tctttcttacgctgcttcttcttttggcgtttcaggcgcttcttggctgtacgctcctcg 385
             |||||||| ||||||||||||||||||||||||||||||||||| ||||| |||||||| 
Sbjct: 64614 tctttcttccgctgcttcttcttttggcgtttcaggcgcttctttgctgtccgctcctct 64555

                                      
Query: 386   gctgctttgagtctttcctccctcc 410
             ||| |||| || |||||||||||||
Sbjct: 64554 gcttcttttagcctttcctccctcc 64530
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>dbj|AK105442.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-125-A07, full
            insert sequence
          Length = 2400

 Score =  113 bits (57), Expect = 5e-22
 Identities = 78/85 (91%)
 Strand = Plus / Minus

                                                                        
Query: 326  tctttcttacgctgcttcttcttttggcgtttcaggcgcttcttggctgtacgctcctcg 385
            |||||||| ||||||||||||||||||||||||||||||||||| ||||| |||||||| 
Sbjct: 2074 tctttcttccgctgcttcttcttttggcgtttcaggcgcttctttgctgtccgctcctct 2015

                                     
Query: 386  gctgctttgagtctttcctccctcc 410
            ||| |||| || |||||||||||||
Sbjct: 2014 gcttcttttagcctttcctccctcc 1990
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>dbj|AK072803.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023139J24, full
           insert sequence
          Length = 988

 Score =  113 bits (57), Expect = 5e-22
 Identities = 78/85 (91%)
 Strand = Plus / Minus

                                                                       
Query: 326 tctttcttacgctgcttcttcttttggcgtttcaggcgcttcttggctgtacgctcctcg 385
           |||||||| ||||||||||||||||||||||||||||||||||| ||||| |||||||| 
Sbjct: 564 tctttcttccgctgcttcttcttttggcgtttcaggcgcttctttgctgtccgctcctct 505

                                    
Query: 386 gctgctttgagtctttcctccctcc 410
           ||| |||| || |||||||||||||
Sbjct: 504 gcttcttttagcctttcctccctcc 480
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>gb|AY111595.1| Zea mays CL40218_1 mRNA sequence
          Length = 505

 Score = 93.7 bits (47), Expect = 5e-16
 Identities = 83/95 (87%)
 Strand = Plus / Minus

                                                                       
Query: 334 acgctgcttcttcttttggcgtttcaggcgcttcttggctgtacgctcctcggctgcttt 393
           ||||| |||||||||||| ||||||||||||||||||||||| |||||||| ||||||||
Sbjct: 137 acgctacttcttcttttgccgtttcaggcgcttcttggctgtccgctcctcagctgcttt 78

                                              
Query: 394 gagtctttcctccctccgcagattgaactcggcca 428
            |  || |||| ||||||||| | |||||| ||||
Sbjct: 77  catcctctcctgcctccgcagttcgaactcagcca 43
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>ref|NM_127087.1| Arabidopsis thaliana unknown protein AT2G15270 mRNA, complete cds
          Length = 841

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                            
Query: 337 ctgcttcttcttttggcgtttcaggcgcttctt 369
           |||||||||||||||||||||||  ||||||||
Sbjct: 506 ctgcttcttcttttggcgtttcaaacgcttctt 474
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>gb|AY079332.1| Arabidopsis thaliana unknown protein (At2g15270) mRNA, complete cds
          Length = 616

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                            
Query: 337 ctgcttcttcttttggcgtttcaggcgcttctt 369
           |||||||||||||||||||||||  ||||||||
Sbjct: 417 ctgcttcttcttttggcgtttcaaacgcttctt 385
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>gb|AY045800.1| Arabidopsis thaliana unknown protein (At2g15270) mRNA, complete cds
          Length = 858

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                            
Query: 337 ctgcttcttcttttggcgtttcaggcgcttctt 369
           |||||||||||||||||||||||  ||||||||
Sbjct: 506 ctgcttcttcttttggcgtttcaaacgcttctt 474
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>gb|AC007267.5| Arabidopsis thaliana chromosome 2 clone F27O10 map mi398, complete
             sequence
          Length = 55686

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                              
Query: 337   ctgcttcttcttttggcgtttcaggcgcttctt 369
             |||||||||||||||||||||||  ||||||||
Sbjct: 36290 ctgcttcttcttttggcgtttcaaacgcttctt 36322
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>emb|BX821101.1|CNS0AA5P Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL15ZE07 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 727

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                            
Query: 337 ctgcttcttcttttggcgtttcaggcgcttctt 369
           |||||||||||||||||||||||  ||||||||
Sbjct: 442 ctgcttcttcttttggcgtttcaaacgcttctt 410
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>gb|AC116386.9| Mus musculus chromosome 15, clone RP23-37B16, complete sequence
          Length = 185556

 Score = 48.1 bits (24), Expect = 0.026
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                      
Query: 143    ctggtgaaaaacaatatccaggaa 166
              ||||||||||||||||||||||||
Sbjct: 139708 ctggtgaaaaacaatatccaggaa 139731
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>gb|AC163400.3| Mus musculus chromosome 15, clone RP24-97G4, complete sequence
          Length = 168328

 Score = 48.1 bits (24), Expect = 0.026
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                     
Query: 143   ctggtgaaaaacaatatccaggaa 166
             ||||||||||||||||||||||||
Sbjct: 57561 ctggtgaaaaacaatatccaggaa 57538
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>gb|AC146092.2| Pan troglodytes BAC clone RP43-48I3 from 7, complete sequence
          Length = 174070

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 386    gctgctttgagtctttcctccc 407
              ||||||||||||||||||||||
Sbjct: 155588 gctgctttgagtctttcctccc 155609
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>gb|AC152064.3| Pan troglodytes BAC clone RP43-134I6 from chromosome 7, complete
             sequence
          Length = 179272

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 386   gctgctttgagtctttcctccc 407
             ||||||||||||||||||||||
Sbjct: 10090 gctgctttgagtctttcctccc 10069
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>gb|AC091736.2| Homo sapiens chromosome 7 clone RP11-644N4, complete sequence
          Length = 156539

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 386   gctgctttgagtctttcctccc 407
             ||||||||||||||||||||||
Sbjct: 26173 gctgctttgagtctttcctccc 26194
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>gb|AC175193.2| Sporobolomyces roseus clone JGIBAIF-13I18, complete sequence
          Length = 33112

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 237   cctcatcgtcgtctgaggactcctcc 262
             |||||||||||||||| |||||||||
Sbjct: 23309 cctcatcgtcgtctgaagactcctcc 23334
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>gb|AC093107.3| Homo sapiens chromosome 7 clone RP11-751K21, complete sequence
          Length = 197837

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 386    gctgctttgagtctttcctccc 407
              ||||||||||||||||||||||
Sbjct: 152233 gctgctttgagtctttcctccc 152254
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>gb|AY348271.1| Drosophila mimica lethal (2) neighbor of tid (l(2)not) gene,
           partial sequence
          Length = 524

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 187 gcaacttcattggcattgctt 207
           |||||||||||||||||||||
Sbjct: 395 gcaacttcattggcattgctt 415
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>ref|XM_323204.1| Neurospora crassa OR74A hypothetical protein (NCU03886.1) partial
           mRNA
          Length = 1497

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 417 tgaactcggccacctgcttcc 437
           |||||||||||||||||||||
Sbjct: 864 tgaactcggccacctgcttcc 884
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>ref|XM_952432.1| Neurospora crassa OR74A hypothetical protein (NCU03886.1) partial
           mRNA
          Length = 1497

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 417 tgaactcggccacctgcttcc 437
           |||||||||||||||||||||
Sbjct: 864 tgaactcggccacctgcttcc 884
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>gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome
          Length = 5650368

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 331     cttacgctgcttcttcttttg 351
               |||||||||||||||||||||
Sbjct: 5300474 cttacgctgcttcttcttttg 5300494
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>gb|AC104037.3| Homo sapiens chromosome 8, clone RP11-692P18, complete sequence
          Length = 152267

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 274   cactttgcttttgggttcctc 294
             |||||||||||||||||||||
Sbjct: 62501 cactttgcttttgggttcctc 62481
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>emb|AL844604.4| Mouse DNA sequence from clone RP24-318C20 on chromosome 4, complete
              sequence
          Length = 173133

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 388    tgctttgagtctttcctccct 408
              |||||||||||||||||||||
Sbjct: 137524 tgctttgagtctttcctccct 137544
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>emb|AL773520.3| Mouse DNA sequence from clone RP23-350F23 on chromosome 4, complete
              sequence
          Length = 214496

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 388    tgctttgagtctttcctccct 408
              |||||||||||||||||||||
Sbjct: 115616 tgctttgagtctttcctccct 115636
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>gb|AC166056.2| Mus musculus BAC clone RP23-462A15 from chromosome 13, complete
             sequence
          Length = 198814

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 297   cgccaccaccgtctggttta 316
             ||||||||||||||||||||
Sbjct: 67611 cgccaccaccgtctggttta 67592
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>gb|AC164613.3| Mus musculus BAC clone RP23-324B8 from chromosome 13, complete sequence
          Length = 197469

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 297    cgccaccaccgtctggttta 316
              ||||||||||||||||||||
Sbjct: 184593 cgccaccaccgtctggttta 184574
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>ref|XM_323540.1| Neurospora crassa OR74A hypothetical protein (NCU04201.1) partial
            mRNA
          Length = 3264

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 418  gaactcggccacctgcttcc 437
            ||||||||||||||||||||
Sbjct: 1737 gaactcggccacctgcttcc 1718
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>ref|XM_956068.1| Neurospora crassa OR74A hypothetical protein (NCU04201.1) partial
            mRNA
          Length = 3264

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 418  gaactcggccacctgcttcc 437
            ||||||||||||||||||||
Sbjct: 1737 gaactcggccacctgcttcc 1718
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>gb|AC138739.8| Mus musculus chromosome 9, clone RP23-380A10, complete sequence
          Length = 217813

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 236    ccctcatcgtcgtctgaggactcc 259
              ||||||||||| ||||||||||||
Sbjct: 104013 ccctcatcgtcctctgaggactcc 104036
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>emb|AL807368.1|NC62D11 Neurospora crassa DNA linkage group V cosmid contig 62D11
          Length = 102165

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 418   gaactcggccacctgcttcc 437
             ||||||||||||||||||||
Sbjct: 10772 gaactcggccacctgcttcc 10753
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>emb|AL807373.1|NC21D9 Neurospora crassa DNA linkage group V cosmid contig 21D9
          Length = 55380

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 418  gaactcggccacctgcttcc 437
            ||||||||||||||||||||
Sbjct: 8631 gaactcggccacctgcttcc 8650
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>emb|AL662785.5| Mouse DNA sequence from clone RP23-186N7 on chromosome 11, complete
              sequence
          Length = 158968

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 135    aatctctactggtgaaaaacaata 158
              |||||||||||| |||||||||||
Sbjct: 144375 aatctctactggagaaaaacaata 144398
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>gb|AC026780.5| Homo sapiens chromosome 5 clone CTC-529L17, complete sequence
          Length = 170059

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 389   gctttgagtctttcctccctccgc 412
             |||||||||||||| |||||||||
Sbjct: 39305 gctttgagtctttcttccctccgc 39328
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>gb|AC034200.6|AC034200 Homo sapiens chromosome 5 clone CTB-135C10, complete sequence
          Length = 143084

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 387    ctgctttgagtctttcctccctcc 410
              ||||||| ||||||||||||||||
Sbjct: 120392 ctgctttcagtctttcctccctcc 120369
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>gb|AC091393.3| Homo sapiens chromosome 5 clone CTC-571O20, complete sequence
          Length = 217781

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 387   ctgctttgagtctttcctccctcc 410
             ||||||| ||||||||||||||||
Sbjct: 88939 ctgctttcagtctttcctccctcc 88916
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>dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete genome
          Length = 1849742

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 287     ggttcctcctcgccaccacc 306
               ||||||||||||||||||||
Sbjct: 1146386 ggttcctcctcgccaccacc 1146367
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>dbj|AB005233.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MBK23
          Length = 79837

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 136   atctctactggtgaaaaaca 155
             ||||||||||||||||||||
Sbjct: 37647 atctctactggtgaaaaaca 37666
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>gb|CP000009.1| Gluconobacter oxydans 621H, complete genome
          Length = 2702173

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 121     tccacaccatccggaatctc 140
               ||||||||||||||||||||
Sbjct: 1024207 tccacaccatccggaatctc 1024226
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>emb|AL807245.17| Mouse DNA sequence from clone RP23-102B2 on chromosome 11, complete
             sequence
          Length = 114581

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 136   atctctactggtgaaaaaca 155
             ||||||||||||||||||||
Sbjct: 63859 atctctactggtgaaaaaca 63878
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>gb|AE017221.1| Thermus thermophilus HB27, complete genome
          Length = 1894877

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 287    ggttcctcctcgccaccacc 306
              ||||||||||||||||||||
Sbjct: 820333 ggttcctcctcgccaccacc 820314


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,100,613
Number of Sequences: 3902068
Number of extensions: 4100613
Number of successful extensions: 67961
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 67821
Number of HSP's gapped (non-prelim): 140
length of query: 468
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 446
effective length of database: 17,147,199,772
effective search space: 7647651098312
effective search space used: 7647651098312
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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