ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart23a10 |
|---|---|
| Clone Library Name | barley_pub |
>FUCT1_CAEEL (Q968A5) GDP-fucose transporter| Length = 363 Score = 34.3 bits (77), Expect = 0.18 Identities = 26/92 (28%), Positives = 39/92 (42%) Frame = -2 Query: 484 IGTTSPVTYQVLGHLKTCLILSFGYVLLKDPFTLRNLAGILIAIFGMGLYSFFSVSESRK 305 I TSP+T+ + G K V + TL + +FG G+Y++ K Sbjct: 274 IQATSPLTHNISGTAKAAAQTVMAVVWYSELKTLLWWTSNFVVLFGSGMYTYVQKRVMDK 333 Query: 304 KTEGAMLPVNTQMSEKDSAPLLGTKASPWQES 209 K GA P + S+K LLG + +ES Sbjct: 334 KNSGAS-PASEAKSDK--VKLLGRDGNAAEES 362
>TPT_SOLTU (P29463) Triose phosphate/phosphate translocator, chloroplast| precursor (cTPT) (E29) Length = 414 Score = 33.1 bits (74), Expect = 0.41 Identities = 16/59 (27%), Positives = 29/59 (49%) Frame = -2 Query: 472 SPVTYQVLGHLKTCLILSFGYVLLKDPFTLRNLAGILIAIFGMGLYSFFSVSESRKKTE 296 +P+T+ V LK ++ F V+ + + + G IAI G+ +YSF +K + Sbjct: 352 APLTHAVGNVLKRVFVIGFSIVIFGNKISTQTGIGTCIAIAGVAIYSFIKAKMEEEKRQ 410
>TPT_PEA (P21727) Triose phosphate/phosphate translocator, chloroplast| precursor (cTPT) (p36) (E30) Length = 402 Score = 32.3 bits (72), Expect = 0.70 Identities = 17/63 (26%), Positives = 33/63 (52%), Gaps = 2/63 (3%) Frame = -2 Query: 472 SPVTYQVLGHLKTCLILSFGYVLLKDPFTLRNLAGILIAIFGMGLYSFF--SVSESRKKT 299 +P+T+ V LK ++ F ++ + + + G IAI G+ LYSF + E +++ Sbjct: 340 APLTHAVGNVLKRVFVIGFSIIIFGNKISTQTGIGTGIAIAGVALYSFIKAQIEEEKRQA 399 Query: 298 EGA 290 + A Sbjct: 400 KAA 402
>TPT1_BRAOB (P52177) Triose phosphate/phosphate translocator, chloroplast| precursor (cTPT) Length = 407 Score = 32.0 bits (71), Expect = 0.91 Identities = 17/60 (28%), Positives = 29/60 (48%) Frame = -2 Query: 472 SPVTYQVLGHLKTCLILSFGYVLLKDPFTLRNLAGILIAIFGMGLYSFFSVSESRKKTEG 293 +P+T+ V LK ++ F V+ + + + G IAI G+ LYS +K +G Sbjct: 345 APLTHAVGNVLKRVFVIGFSIVIFGNKISTQTGIGTGIAIAGVALYSVIKAKIEEEKRQG 404
>TPT_MAIZE (P49133) Triose phosphate/phosphate translocator, chloroplast| precursor (cTPT) Length = 409 Score = 31.6 bits (70), Expect = 1.2 Identities = 17/61 (27%), Positives = 31/61 (50%), Gaps = 3/61 (4%) Frame = -2 Query: 472 SPVTYQVLGHLKTCLILSFGYVLLKDPFTLRNLAGILIAIFGMGLYSFFSV---SESRKK 302 +P+T+ V LK ++ F ++ + + + G IAI G+ +YS+ E RKK Sbjct: 348 APLTHAVGNVLKRVFVIGFSIIVFGNKISTQTGIGTSIAIAGVAMYSYIKAKIEEEKRKK 407 Query: 301 T 299 + Sbjct: 408 S 408
>TPT_FLATR (P49132) Triose phosphate/phosphate translocator, chloroplast| precursor (cTPT) Length = 407 Score = 30.8 bits (68), Expect = 2.0 Identities = 15/63 (23%), Positives = 32/63 (50%), Gaps = 2/63 (3%) Frame = -2 Query: 472 SPVTYQVLGHLKTCLILSFGYVLLKDPFTLRNLAGILIAIFGMGLYSFFS--VSESRKKT 299 +P+T+ V LK ++ F ++ + + + G IAI G+ +YS + E +++ Sbjct: 345 APLTHAVGNVLKRVFVIGFSIIVFGNKISTQTAIGTSIAIAGVAIYSLIKARIEEEKRRM 404 Query: 298 EGA 290 + A Sbjct: 405 KSA 407
>CTPA_MYCLE (P46839) Cation-transporting P-type ATPase A (EC 3.6.3.-)| Length = 780 Score = 30.8 bits (68), Expect = 2.0 Identities = 22/73 (30%), Positives = 33/73 (45%), Gaps = 1/73 (1%) Frame = -2 Query: 487 VIGTTSPVTYQVLGHLKTCLILSFGYVLLKDPFTLRNLAGILIAIFGMGLYSFFSVSES- 311 V+ T + + +K ++ +FGY + P L L+A M SFF VS S Sbjct: 663 VVPITLDLAAATMRTIKFNMVWAFGYNIAAIPIAAAGLLNPLVAGAAMAFSSFFVVSNSL 722 Query: 310 RKKTEGAMLPVNT 272 R + GA+L T Sbjct: 723 RLRNFGAILSCGT 735
>TPT_SPIOL (P11869) Triose phosphate/phosphate translocator, chloroplast| precursor (cTPT) (p36) (E29) Length = 404 Score = 30.8 bits (68), Expect = 2.0 Identities = 15/59 (25%), Positives = 27/59 (45%) Frame = -2 Query: 472 SPVTYQVLGHLKTCLILSFGYVLLKDPFTLRNLAGILIAIFGMGLYSFFSVSESRKKTE 296 +P+T+ V LK ++ F + + + + G IAI G+ LYS +K + Sbjct: 342 APLTHAVGNVLKRVFVIGFSIIAFGNKISTQTAIGTSIAIAGVALYSLIKAKMEEEKRQ 400
>GPT2_ARATH (Q94B38) Glucose-6-phosphate/phosphate translocator 2, chloroplast| precursor Length = 388 Score = 30.0 bits (66), Expect = 3.5 Identities = 15/47 (31%), Positives = 23/47 (48%) Frame = -2 Query: 472 SPVTYQVLGHLKTCLILSFGYVLLKDPFTLRNLAGILIAIFGMGLYS 332 SP+T+ + +K ++ ++ P N G IAIFG LYS Sbjct: 338 SPLTFSIGNTMKRISVIVASIIIFHTPIQPVNALGAAIAIFGTFLYS 384
>TPT_FLAPR (P49131) Triose phosphate/phosphate translocator, chloroplast| precursor (cTPT) Length = 408 Score = 29.6 bits (65), Expect = 4.5 Identities = 14/57 (24%), Positives = 27/57 (47%) Frame = -2 Query: 472 SPVTYQVLGHLKTCLILSFGYVLLKDPFTLRNLAGILIAIFGMGLYSFFSVSESRKK 302 +P+T+ V LK ++ F ++ + + + G IAI G+ +YS +K Sbjct: 346 APLTHAVGNVLKRVFVIGFSIIVFGNKISTQTAIGTSIAIAGVAVYSLIKAKIEEEK 402
>GPT1_ARATH (Q9M5A9) Glucose-6-phosphate/phosphate translocator 1, chloroplast| precursor Length = 388 Score = 28.9 bits (63), Expect = 7.7 Identities = 15/47 (31%), Positives = 23/47 (48%) Frame = -2 Query: 472 SPVTYQVLGHLKTCLILSFGYVLLKDPFTLRNLAGILIAIFGMGLYS 332 SP+T+ V +K ++ ++ + P N G IAI G LYS Sbjct: 338 SPLTFSVGNTMKRISVIVSSIIIFRTPVQPVNALGAAIAILGTFLYS 384
>ACAD9_HUMAN (Q9H845) Acyl-CoA dehydrogenase family member 9, mitochondrial| precursor (EC 1.3.99.-) (ACAD-9) Length = 621 Score = 28.9 bits (63), Expect = 7.7 Identities = 12/35 (34%), Positives = 21/35 (60%) Frame = -2 Query: 448 GHLKTCLILSFGYVLLKDPFTLRNLAGILIAIFGM 344 G L+L FG ++++ L+ +A ILI ++GM Sbjct: 509 GRTVETLLLRFGKTIMEEQLVLKRVANILINLYGM 543 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 59,125,242 Number of Sequences: 219361 Number of extensions: 1088051 Number of successful extensions: 3302 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 3248 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3302 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3420806017 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
