ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart23a10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_197026.1| Oryza sativa (japonica cultivar-group) putative... 236 6e-59
2gb|AC024594.9| Oryza sativa chromosome 10 BAC OSJNBa0093B11 geno... 236 6e-59
3dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 236 6e-59
4gb|AC037425.7|AC037425 Oryza sativa chromosome 10 BAC OSJNBa0055... 236 6e-59
5dbj|AK103346.1| Oryza sativa (japonica cultivar-group) cDNA clon... 236 6e-59
6gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 236 6e-59
7dbj|AK109405.2| Oryza sativa (japonica cultivar-group) cDNA clon... 222 8e-55
8gb|BT017671.1| Zea mays clone EL01N0442B02.c mRNA sequence 194 2e-46
9gb|AY109310.1| Zea mays PCO095035 mRNA sequence 194 2e-46
10ref|XM_466859.1| Oryza sativa (japonica cultivar-group), mRNA 94 5e-16
11dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 94 5e-16
12dbj|AP006168.3| Oryza sativa (japonica cultivar-group) genomic D... 94 5e-16
13dbj|AK070820.1| Oryza sativa (japonica cultivar-group) cDNA clon... 94 5e-16
14dbj|AK059676.1| Oryza sativa (japonica cultivar-group) cDNA clon... 94 5e-16
15gb|BT016349.1| Zea mays clone Contig182 mRNA sequence 46 0.11
16gb|AY108612.1| Zea mays PCO138723 mRNA sequence 46 0.11
17ref|XM_792142.1| PREDICTED: Strongylocentrotus purpuratus simila... 42 1.7
18gb|AC146594.3| Mus musculus BAC clone RP24-155O13 from chromosom... 40 6.6
19emb|AL591789.1|SME591789 Sinorhizobium meliloti 1021 complete ch... 40 6.6
20gb|U39472.1| Caenorhabditis elegans cosmid B0304, complete sequence 40 6.6
21gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete ... 40 6.6
22gb|AF404306.1| Rhizophydium sp. 136 mitochondrion, complete genome 40 6.6
23gb|AE015928.1| Bacteroides thetaiotaomicron VPI-5482, complete g... 40 6.6
24gb|AC160560.2| Mus musculus BAC clone RP23-357O18 from chromosom... 40 6.6
25gb|M59940.1|CELMYOD Caenorhabditis elegans N2 CeMyoD (hlh-1) alt... 40 6.6 
>ref|NM_197026.1| Oryza sativa (japonica cultivar-group) putative
           glucose-6-phosphate/phosphate-translocator
           (OSJNBa0055P24.11), mRNA
          Length = 1335

 Score =  236 bits (119), Expect = 6e-59
 Identities = 161/175 (92%)
 Strand = Plus / Minus

                                                                       
Query: 314 ctcggagacggagaagaaggagtagaggcccatgccgaagatggcaatgaggatgccggc 373
           ||||||||||||||||||||||||||||||||| ||||||||||| | ||||||||||||
Sbjct: 847 ctcggagacggagaagaaggagtagaggcccatcccgaagatggcgacgaggatgccggc 788

                                                                       
Query: 374 gaggttgcgtagtgtgaagggatctttgaggaggacgtagccgaaggagaggatgaggca 433
           || |||||| |  |||||||| ||  ||||||||||||||||||||||||||||||||||
Sbjct: 787 gacgttgcggaaggtgaaggggtccctgaggaggacgtagccgaaggagaggatgaggca 728

                                                                  
Query: 434 cgtcttgaggtggcccaacacctggtacgtcactggcgacgtcgtgccgatcacc 488
           |||||||||||| |||| ||||||||||||||| ||||||||||| |||||||||
Sbjct: 727 cgtcttgaggtgccccagcacctggtacgtcaccggcgacgtcgtcccgatcacc 673



 Score = 48.1 bits (24), Expect = 0.027
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                        
Query: 151  gccggctaaatgcgctcttcgcggtccttggcacgtcgtcgaag 194
            ||||||| || ||||||||||| ||||| ||||| |||||||||
Sbjct: 1046 gccggctgaacgcgctcttcgccgtcctcggcacctcgtcgaag 1003
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>gb|AC024594.9| Oryza sativa chromosome 10 BAC OSJNBa0093B11 genomic sequence, complete
              sequence
          Length = 178692

 Score =  236 bits (119), Expect = 6e-59
 Identities = 161/175 (92%)
 Strand = Plus / Plus

                                                                          
Query: 314    ctcggagacggagaagaaggagtagaggcccatgccgaagatggcaatgaggatgccggc 373
              ||||||||||||||||||||||||||||||||| ||||||||||| | ||||||||||||
Sbjct: 171779 ctcggagacggagaagaaggagtagaggcccatcccgaagatggcgacgaggatgccggc 171838

                                                                          
Query: 374    gaggttgcgtagtgtgaagggatctttgaggaggacgtagccgaaggagaggatgaggca 433
              || |||||| |  |||||||| ||  ||||||||||||||||||||||||||||||||||
Sbjct: 171839 gacgttgcggaaggtgaaggggtccctgaggaggacgtagccgaaggagaggatgaggca 171898

                                                                     
Query: 434    cgtcttgaggtggcccaacacctggtacgtcactggcgacgtcgtgccgatcacc 488
              |||||||||||| |||| ||||||||||||||| ||||||||||| |||||||||
Sbjct: 171899 cgtcttgaggtgccccagcacctggtacgtcaccggcgacgtcgtcccgatcacc 171953



 Score = 48.1 bits (24), Expect = 0.027
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                          
Query: 151    gccggctaaatgcgctcttcgcggtccttggcacgtcgtcgaag 194
              ||||||| || ||||||||||| ||||| ||||| |||||||||
Sbjct: 170986 gccggctgaacgcgctcttcgccgtcctcggcacctcgtcgaag 171029
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score =  236 bits (119), Expect = 6e-59
 Identities = 161/175 (92%)
 Strand = Plus / Minus

                                                                            
Query: 314      ctcggagacggagaagaaggagtagaggcccatgccgaagatggcaatgaggatgccggc 373
                ||||||||||||||||||||||||||||||||| ||||||||||| | ||||||||||||
Sbjct: 17502852 ctcggagacggagaagaaggagtagaggcccatcccgaagatggcgacgaggatgccggc 17502793

                                                                            
Query: 374      gaggttgcgtagtgtgaagggatctttgaggaggacgtagccgaaggagaggatgaggca 433
                || |||||| |  |||||||| ||  ||||||||||||||||||||||||||||||||||
Sbjct: 17502792 gacgttgcggaaggtgaaggggtccctgaggaggacgtagccgaaggagaggatgaggca 17502733

                                                                       
Query: 434      cgtcttgaggtggcccaacacctggtacgtcactggcgacgtcgtgccgatcacc 488
                |||||||||||| |||| ||||||||||||||| ||||||||||| |||||||||
Sbjct: 17502732 cgtcttgaggtgccccagcacctggtacgtcaccggcgacgtcgtcccgatcacc 17502678



 Score = 48.1 bits (24), Expect = 0.027
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                            
Query: 151      gccggctaaatgcgctcttcgcggtccttggcacgtcgtcgaag 194
                ||||||| || ||||||||||| ||||| ||||| |||||||||
Sbjct: 17503645 gccggctgaacgcgctcttcgccgtcctcggcacctcgtcgaag 17503602
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>gb|AC037425.7|AC037425 Oryza sativa chromosome 10 BAC OSJNBa0055P24 genomic sequence, complete
              sequence
          Length = 134058

 Score =  236 bits (119), Expect = 6e-59
 Identities = 161/175 (92%)
 Strand = Plus / Minus

                                                                          
Query: 314    ctcggagacggagaagaaggagtagaggcccatgccgaagatggcaatgaggatgccggc 373
              ||||||||||||||||||||||||||||||||| ||||||||||| | ||||||||||||
Sbjct: 131847 ctcggagacggagaagaaggagtagaggcccatcccgaagatggcgacgaggatgccggc 131788

                                                                          
Query: 374    gaggttgcgtagtgtgaagggatctttgaggaggacgtagccgaaggagaggatgaggca 433
              || |||||| |  |||||||| ||  ||||||||||||||||||||||||||||||||||
Sbjct: 131787 gacgttgcggaaggtgaaggggtccctgaggaggacgtagccgaaggagaggatgaggca 131728

                                                                     
Query: 434    cgtcttgaggtggcccaacacctggtacgtcactggcgacgtcgtgccgatcacc 488
              |||||||||||| |||| ||||||||||||||| ||||||||||| |||||||||
Sbjct: 131727 cgtcttgaggtgccccagcacctggtacgtcaccggcgacgtcgtcccgatcacc 131673



 Score = 48.1 bits (24), Expect = 0.027
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                          
Query: 151    gccggctaaatgcgctcttcgcggtccttggcacgtcgtcgaag 194
              ||||||| || ||||||||||| ||||| ||||| |||||||||
Sbjct: 132640 gccggctgaacgcgctcttcgccgtcctcggcacctcgtcgaag 132597
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>dbj|AK103346.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033126D12, full
            insert sequence
          Length = 1629

 Score =  236 bits (119), Expect = 6e-59
 Identities = 161/175 (92%)
 Strand = Plus / Minus

                                                                        
Query: 314  ctcggagacggagaagaaggagtagaggcccatgccgaagatggcaatgaggatgccggc 373
            ||||||||||||||||||||||||||||||||| ||||||||||| | ||||||||||||
Sbjct: 1141 ctcggagacggagaagaaggagtagaggcccatcccgaagatggcgacgaggatgccggc 1082

                                                                        
Query: 374  gaggttgcgtagtgtgaagggatctttgaggaggacgtagccgaaggagaggatgaggca 433
            || |||||| |  |||||||| ||  ||||||||||||||||||||||||||||||||||
Sbjct: 1081 gacgttgcggaaggtgaaggggtccctgaggaggacgtagccgaaggagaggatgaggca 1022

                                                                   
Query: 434  cgtcttgaggtggcccaacacctggtacgtcactggcgacgtcgtgccgatcacc 488
            |||||||||||| |||| ||||||||||||||| ||||||||||| |||||||||
Sbjct: 1021 cgtcttgaggtgccccagcacctggtacgtcaccggcgacgtcgtcccgatcacc 967



 Score = 48.1 bits (24), Expect = 0.027
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                        
Query: 151  gccggctaaatgcgctcttcgcggtccttggcacgtcgtcgaag 194
            ||||||| || ||||||||||| ||||| ||||| |||||||||
Sbjct: 1340 gccggctgaacgcgctcttcgccgtcctcggcacctcgtcgaag 1297
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score =  236 bits (119), Expect = 6e-59
 Identities = 161/175 (92%)
 Strand = Plus / Minus

                                                                            
Query: 314      ctcggagacggagaagaaggagtagaggcccatgccgaagatggcaatgaggatgccggc 373
                ||||||||||||||||||||||||||||||||| ||||||||||| | ||||||||||||
Sbjct: 17511892 ctcggagacggagaagaaggagtagaggcccatcccgaagatggcgacgaggatgccggc 17511833

                                                                            
Query: 374      gaggttgcgtagtgtgaagggatctttgaggaggacgtagccgaaggagaggatgaggca 433
                || |||||| |  |||||||| ||  ||||||||||||||||||||||||||||||||||
Sbjct: 17511832 gacgttgcggaaggtgaaggggtccctgaggaggacgtagccgaaggagaggatgaggca 17511773

                                                                       
Query: 434      cgtcttgaggtggcccaacacctggtacgtcactggcgacgtcgtgccgatcacc 488
                |||||||||||| |||| ||||||||||||||| ||||||||||| |||||||||
Sbjct: 17511772 cgtcttgaggtgccccagcacctggtacgtcaccggcgacgtcgtcccgatcacc 17511718



 Score = 48.1 bits (24), Expect = 0.027
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                            
Query: 151      gccggctaaatgcgctcttcgcggtccttggcacgtcgtcgaag 194
                ||||||| || ||||||||||| ||||| ||||| |||||||||
Sbjct: 17512685 gccggctgaacgcgctcttcgccgtcctcggcacctcgtcgaag 17512642
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>dbj|AK109405.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-H02, full
           insert sequence
          Length = 1142

 Score =  222 bits (112), Expect = 8e-55
 Identities = 161/176 (91%), Gaps = 1/176 (0%)
 Strand = Plus / Minus

                                                                       
Query: 314 ctcggagacggagaagaaggagtagaggccc-atgccgaagatggcaatgaggatgccgg 372
           ||||||||||||||||||||||||||||||| || ||||||||||| | |||||||||||
Sbjct: 626 ctcggagacggagaagaaggagtagaggccccatcccgaagatggcgacgaggatgccgg 567

                                                                       
Query: 373 cgaggttgcgtagtgtgaagggatctttgaggaggacgtagccgaaggagaggatgaggc 432
           ||| |||||| |  |||||||| ||  |||||||||||||||||||||||||||||||||
Sbjct: 566 cgacgttgcggaaggtgaaggggtccctgaggaggacgtagccgaaggagaggatgaggc 507

                                                                   
Query: 433 acgtcttgaggtggcccaacacctggtacgtcactggcgacgtcgtgccgatcacc 488
           ||||||||||||| |||| ||||||||||||||| ||||||||||| |||||||||
Sbjct: 506 acgtcttgaggtgccccagcacctggtacgtcaccggcgacgtcgtcccgatcacc 451



 Score = 48.1 bits (24), Expect = 0.027
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                       
Query: 151 gccggctaaatgcgctcttcgcggtccttggcacgtcgtcgaag 194
           ||||||| || ||||||||||| ||||| ||||| |||||||||
Sbjct: 825 gccggctgaacgcgctcttcgccgtcctcggcacctcgtcgaag 782
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>gb|BT017671.1| Zea mays clone EL01N0442B02.c mRNA sequence
          Length = 975

 Score =  194 bits (98), Expect = 2e-46
 Identities = 170/194 (87%)
 Strand = Plus / Minus

                                                                       
Query: 295 cctcggtcttcttcctgctctcggagacggagaagaaggagtagaggcccatgccgaaga 354
           |||||||||||||||||||||||  ||||||| || ||||||||||||||||||||||||
Sbjct: 443 cctcggtcttcttcctgctctcgacgacggagtagtaggagtagaggcccatgccgaaga 384

                                                                       
Query: 355 tggcaatgaggatgccggcgaggttgcgtagtgtgaagggatctttgaggaggacgtagc 414
           |||| |||||||||||  | | ||||||     ||||||| |||||||||| || |||||
Sbjct: 383 tggcgatgaggatgcccaccacgttgcgcgcgctgaaggggtctttgaggatgatgtagc 324

                                                                       
Query: 415 cgaaggagaggatgaggcacgtcttgaggtggcccaacacctggtacgtcactggcgacg 474
           |||||||||| |  |  ||||||||||||||||||| ||||||||||||||| |||||||
Sbjct: 323 cgaaggagagcaccaaacacgtcttgaggtggcccagcacctggtacgtcacgggcgacg 264

                         
Query: 475 tcgtgccgatcacc 488
           ||||||||||||||
Sbjct: 263 tcgtgccgatcacc 250
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>gb|AY109310.1| Zea mays PCO095035 mRNA sequence
          Length = 780

 Score =  194 bits (98), Expect = 2e-46
 Identities = 170/194 (87%)
 Strand = Plus / Minus

                                                                       
Query: 295 cctcggtcttcttcctgctctcggagacggagaagaaggagtagaggcccatgccgaaga 354
           |||||||||||||||||||||||  ||||||| || ||||||||||||||||||||||||
Sbjct: 545 cctcggtcttcttcctgctctcgacgacggagtagtaggagtagaggcccatgccgaaga 486

                                                                       
Query: 355 tggcaatgaggatgccggcgaggttgcgtagtgtgaagggatctttgaggaggacgtagc 414
           |||| |||||||||||  | | ||||||     ||||||| |||||||||| || |||||
Sbjct: 485 tggcgatgaggatgcccaccacgttgcgcgcgctgaaggggtctttgaggatgatgtagc 426

                                                                       
Query: 415 cgaaggagaggatgaggcacgtcttgaggtggcccaacacctggtacgtcactggcgacg 474
           |||||||||| |  |  ||||||||||||||||||| ||||||||||||||| |||||||
Sbjct: 425 cgaaggagagcaccaaacacgtcttgaggtggcccagcacctggtacgtcacgggcgacg 366

                         
Query: 475 tcgtgccgatcacc 488
           ||||||||||||||
Sbjct: 365 tcgtgccgatcacc 352
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>ref|XM_466859.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1572

 Score = 93.7 bits (47), Expect = 5e-16
 Identities = 56/59 (94%)
 Strand = Plus / Minus

                                                                      
Query: 429 aggcacgtcttgaggtggcccaacacctggtacgtcactggcgacgtcgtgccgatcac 487
           |||||||||||||||||||||| ||||||||||||||| ||||||||||| ||||||||
Sbjct: 978 aggcacgtcttgaggtggcccagcacctggtacgtcaccggcgacgtcgtcccgatcac 920
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 93.7 bits (47), Expect = 5e-16
 Identities = 56/59 (94%)
 Strand = Plus / Minus

                                                                           
Query: 429      aggcacgtcttgaggtggcccaacacctggtacgtcactggcgacgtcgtgccgatcac 487
                |||||||||||||||||||||| ||||||||||||||| ||||||||||| ||||||||
Sbjct: 25140736 aggcacgtcttgaggtggcccagcacctggtacgtcaccggcgacgtcgtcccgatcac 25140678
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>dbj|AP006168.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:B1469H02
          Length = 136602

 Score = 93.7 bits (47), Expect = 5e-16
 Identities = 56/59 (94%)
 Strand = Plus / Minus

                                                                        
Query: 429   aggcacgtcttgaggtggcccaacacctggtacgtcactggcgacgtcgtgccgatcac 487
             |||||||||||||||||||||| ||||||||||||||| ||||||||||| ||||||||
Sbjct: 41129 aggcacgtcttgaggtggcccagcacctggtacgtcaccggcgacgtcgtcccgatcac 41071
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>dbj|AK070820.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023066G14, full
           insert sequence
          Length = 1571

 Score = 93.7 bits (47), Expect = 5e-16
 Identities = 56/59 (94%)
 Strand = Plus / Minus

                                                                      
Query: 429 aggcacgtcttgaggtggcccaacacctggtacgtcactggcgacgtcgtgccgatcac 487
           |||||||||||||||||||||| ||||||||||||||| ||||||||||| ||||||||
Sbjct: 977 aggcacgtcttgaggtggcccagcacctggtacgtcaccggcgacgtcgtcccgatcac 919
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>dbj|AK059676.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-031-G11, full
           insert sequence
          Length = 1091

 Score = 93.7 bits (47), Expect = 5e-16
 Identities = 56/59 (94%)
 Strand = Plus / Minus

                                                                      
Query: 429 aggcacgtcttgaggtggcccaacacctggtacgtcactggcgacgtcgtgccgatcac 487
           |||||||||||||||||||||| ||||||||||||||| ||||||||||| ||||||||
Sbjct: 726 aggcacgtcttgaggtggcccagcacctggtacgtcaccggcgacgtcgtcccgatcac 668
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>gb|BT016349.1| Zea mays clone Contig182 mRNA sequence
          Length = 1271

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 68/83 (81%)
 Strand = Plus / Minus

                                                                       
Query: 405 aggacgtagccgaaggagaggatgaggcacgtcttgaggtggcccaacacctggtacgtc 464
           |||||||||||||||| |||||  | |||||| || |||||||| |  || ||||| || 
Sbjct: 673 aggacgtagccgaaggcgaggaccaagcacgttttcaggtggccgagaacttggtaggtt 614

                                  
Query: 465 actggcgacgtcgtgccgatcac 487
           || ||||||||| | ||||||||
Sbjct: 613 acaggcgacgtcttcccgatcac 591
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>gb|AY108612.1| Zea mays PCO138723 mRNA sequence
          Length = 1272

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 68/83 (81%)
 Strand = Plus / Minus

                                                                       
Query: 405 aggacgtagccgaaggagaggatgaggcacgtcttgaggtggcccaacacctggtacgtc 464
           |||||||||||||||| |||||  | |||||| || |||||||| |  || ||||| || 
Sbjct: 663 aggacgtagccgaaggcgaggaccaagcacgttttcaggtggccgagaacttggtaggtt 604

                                  
Query: 465 actggcgacgtcgtgccgatcac 487
           || ||||||||| | ||||||||
Sbjct: 603 acaggcgacgtcttcccgatcac 581
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>ref|XM_792142.1| PREDICTED: Strongylocentrotus purpuratus similar to Bifunctional
           3-phosphoadenosine 5-phosphosulfate synthethase 1 (PAPS
           synthethase 1) (PAPSS 1) (Sulfurylase kinase 1) (SK1)
           (SK 1) (LOC592629), mRNA
          Length = 1196

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 252 gaatccttctcgctcatctgg 272
           |||||||||||||||||||||
Sbjct: 592 gaatccttctcgctcatctgg 572
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>gb|AC146594.3| Mus musculus BAC clone RP24-155O13 from chromosome 14, complete
             sequence
          Length = 172361

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 2     gaaaaaagaaccaccttaca 21
             ||||||||||||||||||||
Sbjct: 99400 gaaaaaagaaccaccttaca 99381
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>emb|AL591789.1|SME591789 Sinorhizobium meliloti 1021 complete chromosome; segment 8/12
          Length = 294800

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 414  ccgaaggagaggatgaggca 433
            ||||||||||||||||||||
Sbjct: 5736 ccgaaggagaggatgaggca 5717
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>gb|U39472.1| Caenorhabditis elegans cosmid B0304, complete sequence
          Length = 42282

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 301   tcttcttcctgctctcggag 320
             ||||||||||||||||||||
Sbjct: 15586 tcttcttcctgctctcggag 15567
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>gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete sequence
          Length = 2726152

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                           
Query: 185     gtcgtcgaagttctccgccccgctgctc 212
               |||||| |||||| ||||||||||||||
Sbjct: 1349791 gtcgtccaagttcaccgccccgctgctc 1349818
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>gb|AF404306.1| Rhizophydium sp. 136 mitochondrion, complete genome
          Length = 68834

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 89   tagatattgatgctgatataccaa 112
            ||||||| ||||||||||||||||
Sbjct: 6795 tagatatggatgctgatataccaa 6818
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>gb|AE015928.1| Bacteroides thetaiotaomicron VPI-5482, complete genome
          Length = 6260361

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 229    ctttcgtgccaaggagcggt 248
              ||||||||||||||||||||
Sbjct: 255887 ctttcgtgccaaggagcggt 255868
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>gb|AC160560.2| Mus musculus BAC clone RP23-357O18 from chromosome 9, complete sequence
          Length = 213978

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 318    gagacggagaagaaggagtagagg 341
              |||| |||||||||||||||||||
Sbjct: 112955 gagagggagaagaaggagtagagg 112978
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>gb|M59940.1|CELMYOD Caenorhabditis elegans N2 CeMyoD (hlh-1) alternatively spliced genes,
            complete cds
          Length = 6751

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 301  tcttcttcctgctctcggag 320
            ||||||||||||||||||||
Sbjct: 1521 tcttcttcctgctctcggag 1502


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,291,698
Number of Sequences: 3902068
Number of extensions: 3291698
Number of successful extensions: 64089
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 63919
Number of HSP's gapped (non-prelim): 167
length of query: 488
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 466
effective length of database: 17,147,199,772
effective search space: 7990595093752
effective search space used: 7990595093752
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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